prot_H-paniculata_contig530.12695.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig530.12695.1
Unique Nameprot_H-paniculata_contig530.12695.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length297
Homology
BLAST of mRNA_H-paniculata_contig530.12695.1 vs. uniprot
Match: D8LLI1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLI1_ECTSI)

HSP 1 Score: 339 bits (870), Expect = 6.760e-114
Identity = 179/286 (62.59%), Postives = 213/286 (74.48%), Query Frame = 0
Query:   20 GVQAFIAPALPTHASTTRQVTSSR----------VMCMSAATEDSTTRAEALGAMGTALLGIIAGVTVVPSASNAGSTTDANKKLSSFDLPPIVDAPDGFNTLLESYGNKDASRDTSILGSSDRDPILVTWNYPKGWLVQAPTMDTNREAGTVSTGDYGRGDSAALFVAPKSAIGGSNLADKGTMEGVIRKALSQKGENQYQSFKLKSVKDGITDDKGHKYYIAEFNYELLTGAGFIVERKGVASATQVGKSVQAVVAATTANRVKKMKPSLDEVARSFRIYEGSF 295
            G+ AFI P +P    + RQ +SS           V         + +R+EAL   G A+LG +   T VP+ ++AGS  +ANK+LS ++LPP+VD P GFNTLLE YG   A +++  LGSS+RDPILVTWNYPKGW+VQ P  DTN+EAGTVSTGDYGRGDSA LFVAPKS IGGS+L+ K TMEGV++KALSQKGENQ+QSFKLKSVKDG TD  G+KYYIA+F YELLTGAGF VERKGVAS TQ+G SV AVV ATTANR K +KP L E+ARSFR+YEG F
Sbjct:   14 GINAFITPGVPVVPVSARQASSSSGRVAATTRMGVSDREGLASSACSRSEALSTFGAAVLGAVVVGTGVPAPASAGSVAEANKRLSEYNLPPVVDVPGGFNTLLEGYGKDGALKNS--LGSSNRDPILVTWNYPKGWIVQRPNTDTNKEAGTVSTGDYGRGDSAGLFVAPKSLIGGSSLSSKDTMEGVLKKALSQKGENQFQSFKLKSVKDGETDFNGNKYYIADFQYELLTGAGFTVERKGVASVTQIGNSVNAVVGATTANRAKTVKPQLQEIARSFRVYEGKF 297          
BLAST of mRNA_H-paniculata_contig530.12695.1 vs. uniprot
Match: A0A835Z8Y2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8Y2_9STRA)

HSP 1 Score: 206 bits (525), Expect = 8.270e-62
Identity = 107/217 (49.31%), Postives = 144/217 (66.36%), Query Frame = 0
Query:   79 PSASNAGSTTDANKKLSSFDLPPIVDAPDGFNTLLESYGNKDASRDTSILGSSDRDPILVTWNYPKGWLVQAPTMDTNREAGTVSTGDYGRGDSAALFVAPKSAIGGSNLA--DKGTMEGVIRKALSQKGENQYQSFKLKSVKDGITDDKGHKYYIAEFNYELLTGAGFIVERKGVASATQVGKSVQAVVAATTANRVKKMKPSLDEVARSFRIYEG 293
            P  ++A      N +L+ + LP +   PDG   LLE YG +D +R+T          +LVTWNYP GW+ Q P++DTN E GTV+TGDY +GDSA L V P   +GG  L+  +K  +E ++ ++++QKG NQ Q+FKLK V +G T  KG +Y   EF Y+LLTGAGFIVER G  S TQVGK VQ+V+A TTA R+KK++P L E+A SFR+Y+G
Sbjct:   75 PQPASALGLKAVNARLADYGLPGVGKPPDGMKALLEIYG-RDQNRET----------LLVTWNYPNGWITQRPSLDTNSEDGTVATGDYQKGDSAFLVVQPLDVLGGEKLSATNKALVEKLVLQSITQKGANQIQNFKLKKVTEGATGAKGQQYINVEFKYDLLTGAGFIVERVGYGSLTQVGKGVQSVMAVTTAARLKKLQPKLQEIATSFRVYDG 280          
BLAST of mRNA_H-paniculata_contig530.12695.1 vs. uniprot
Match: A0A4D9DCV0_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DCV0_9STRA)

HSP 1 Score: 171 bits (434), Expect = 5.290e-49
Identity = 94/223 (42.15%), Postives = 131/223 (58.74%), Query Frame = 0
Query:   71 IIAGVTVVPSASNAGSTTDANKKLSSFDLPPIVDAPDGFNTLLESYGNKDASRDTSILGSSDRDPILVTWNYPKGWLVQAPTMDTNREAGTVSTGDYGRGDSAALFVAPKSAIGGSNLADKGTMEGVIRKALSQKGENQYQSFKLKSVKDGITDDKGHKYYIAEFNYELLTGAGFIVERKGVASATQVGKSVQAVVAATTANRVKKMKPSLDEVARSFRIYEG 293
            ++ G   V   + A   +  N +L+S+ LPPI+D P GF+ L+E YG    ++        +R+ +LV + YP  W+V  P++D N E GT+S GDY +GDSAA +V    A G            V+ +A+ QK +N YQ+FK+   + G     G +Y I EF YELLTGAGF V+RKGVAS TQVGK+VQ +  ATTA R KK+      +A SFR+Y+G
Sbjct:    7 LVGGKAGVVQPAQAAGLSKVNGELASYGLPPILDVPGGFSPLVEVYGKAAGAK-------KERETLLVQFLYPSLWVVSKPSIDKNGEEGTISAGDYQKGDSAAFYVEEGPASGKLEQESADYFGEVVTRAIGQKSQNVYQNFKVLKKRPGAKGANGAQYTIVEFKYELLTGAGFTVDRKGVASVTQVGKNVQGLWVATTAARWKKIGNDCITMADSFRVYDG 222          
BLAST of mRNA_H-paniculata_contig530.12695.1 vs. uniprot
Match: W7TXP4_9STRA (Uncharacterized protein n=3 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TXP4_9STRA)

HSP 1 Score: 172 bits (435), Expect = 4.810e-48
Identity = 93/223 (41.70%), Postives = 131/223 (58.74%), Query Frame = 0
Query:   71 IIAGVTVVPSASNAGSTTDANKKLSSFDLPPIVDAPDGFNTLLESYGNKDASRDTSILGSSDRDPILVTWNYPKGWLVQAPTMDTNREAGTVSTGDYGRGDSAALFVAPKSAIGGSNLADKGTMEGVIRKALSQKGENQYQSFKLKSVKDGITDDKGHKYYIAEFNYELLTGAGFIVERKGVASATQVGKSVQAVVAATTANRVKKMKPSLDEVARSFRIYEG 293
            ++ G   V   + A   +  N +L+ + LPPI+D P GF+ L+E YG    ++        +R+ +LV + YP  W+V  P++D N E GT+S GDY +GDSAA +V    A G            V+++A+ QK +N YQ+FK+   + G     G +Y I EF YELLTGAGF V+RKGVAS TQVGK+VQ +  ATTA R KK+      +A SFR+Y+G
Sbjct:   98 LVGGKAGVVQPAQAAGLSKVNSELAGYGLPPILDVPGGFSPLVEVYGKAAGAK-------KERETLLVQFLYPSLWVVSKPSIDKNGEEGTISAGDYQKGDSAAFYVEEGPASGKLEQESADYFGEVVKRAIGQKSQNVYQNFKVLKKRPGAKGANGAQYTIVEFKYELLTGAGFTVDRKGVASVTQVGKNVQGLWVATTAARWKKIGNDCITMADSFRVYDG 313          
BLAST of mRNA_H-paniculata_contig530.12695.1 vs. uniprot
Match: A0A7S2V7M0_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V7M0_9STRA)

HSP 1 Score: 171 bits (433), Expect = 6.240e-48
Identity = 93/218 (42.66%), Postives = 138/218 (63.30%), Query Frame = 0
Query:   79 PSASNAGSTTDANKKLSSFDLPPIV-DAPDGFNTLLESYGNKDASRDTSILGSSDRDPILVTWNYPKGWLVQAPTMDTNREAGTVSTGDYGRGDSAALFVAPKSAIGGSNLADKGT--MEGVIRKALSQKGENQYQSFKLKSVKDGITDDKGHKYYIAEFNYELLTGAGFIVERKGVASATQVGKSVQAVVAATTANRVKKMKPSLDEVARSFRIYEG 293
            P ++ A S  +AN +L+++ + P   + P GF+ L+E +G KD  R           P L+++ YP  W++Q P+M TN E+GT + G+Y +GDSAA++V P S + G+++  KG   +  ++   L+QKGENQYQ+FK   +  G T  KG KYY+ +F YELLTGAGF ++R+GVA+ T   K+VQA+V ATT  R KK+   L  +A SFR Y+G
Sbjct:   83 PQSAEAKSIKEANNELTNYGVSPFEGNVPQGFSPLVEVWG-KDGIR----------PPYLISFLYPALWVIQKPSMTTNGESGTYAAGNYQKGDSAAVYVGP-SEVDGNDVMAKGKDYISSIVLGGLTQKGENQYQNFKTTKIVAGATGLKGQKYYVVDFKYELLTGAGFYIDRRGVAAVTGTPKNVQAIVCATTDTRYKKLADDLHVIADSFRAYDG 288          
BLAST of mRNA_H-paniculata_contig530.12695.1 vs. uniprot
Match: A0A7S2RLR6_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RLR6_9STRA)

HSP 1 Score: 164 bits (416), Expect = 1.240e-45
Identity = 100/229 (43.67%), Postives = 138/229 (60.26%), Query Frame = 0
Query:   68 LLGIIAGVTVVPSASNAGSTTDANKKLSSFDLPPIVDAPDGFNTLLESYGNKDASRDTSILGSSDRDPILVTWNYPKGWLVQAPTMDTNREAGTVSTGDYGRGDSAALFVAPKSAIGGSNLAD--KGTMEGVIRKALSQKGENQYQSFKLKSVKDGITDDKGHKYYIAEFNYELLTGAGFIVERKGVASATQVG-KSVQAVVAATTANRVKKMKPSLDEVARSFRIYEG 293
            L G +A    VP+ S A    D  +++  + +     APDGF+ ++  YG        ++ G   +DP+LVT+N P GWLV  P +D N E GTVS+GDYG+GDSAALF+ P   + G +LAD  K   E ++   ++QKGE+  Q FKL+ ++  +  +    YY+ +F Y LLTGAGF V RKG  S T VG KSVQA++ A+T  R KK +P L EVA SFR+Y G
Sbjct:   60 LAGALAAALAVPAPSLAFGN-DFQRQMQGYGIKDYKQAPDGFSPVVGFYGR-------AVPG---QDPLLVTYNSPSGWLVVRPNIDNNGEDGTVSSGDYGKGDSAALFIGPP--LKGGSLADQPKEYFEKLVFAGVTQKGESMVQGFKLRKIQK-LEANTETPYYLVDFTYTLLTGAGFEVNRKGTGSVTAVGDKSVQAMIGASTDVRFKKTEPLLREVAESFRVYGG 274          
BLAST of mRNA_H-paniculata_contig530.12695.1 vs. uniprot
Match: F0YP05_AURAN (Expressed protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YP05_AURAN)

HSP 1 Score: 158 bits (399), Expect = 1.910e-43
Identity = 89/218 (40.83%), Postives = 133/218 (61.01%), Query Frame = 0
Query:   75 VTVVPSASNAGSTTDANKKLSSFDLPPIVDAPDGFNTLLESYGNKDASRDTSILGSSDRDPILVTWNYPKGWLVQAPTMDTNREAGTVSTGDYGRGDSAALFVAPKSAIGGSNLADKGTMEGVIRKALSQKGENQYQSFKLKSVKDGITDDKGHKYYIAEFNYELLTGAGFIVERKGVASATQVGKSVQAVVAATTANRVKKMKPSLDEVARSFRIYE 292
            V++ P+ + A      N+KL    LPP+   PDGF+ +L S  N+D S             ++V +N+P  WLV  P+++TN E+GTVS GDYG+GDSAAL+V+     G     DK     +I K L+QKG+NQ+Q+F++++V  G  +       + +F YELLTGAGF VER+GVA+ + V    QA++A TT+ R KK++P L ++  SFR+Y+
Sbjct:   46 VSLAPAPALAYDLAKYNRKLDKLGLPPVAGIPDGFSPVLSSV-NQDQS-------------LIVQFNHPNAWLVVKPSVNTNGESGTVSAGDYGKGDSAALYVSDLPPGG-----DKAFYAKLIAKGLAQKGDNQFQNFRVRAVSPGSPNA------VVDFEYELLTGAGFTVERRGVAAVSGVAGKSQALLAVTTSARYKKLEPELRKIVDSFRVYD 238          
BLAST of mRNA_H-paniculata_contig530.12695.1 vs. uniprot
Match: A0A7S4MBN6_9STRA (Hypothetical protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MBN6_9STRA)

HSP 1 Score: 159 bits (401), Expect = 2.540e-43
Identity = 97/258 (37.60%), Postives = 144/258 (55.81%), Query Frame = 0
Query:   43 RVMCMSAATEDSTTR----AEALGAMGTALLGIIAGVTVVPSASNAGSTTDANKKLSSFDLPPIVDAPDGFNTLLESYGNKDASRDTSILGSSDRDPILVTWNYPKGWLVQAPTMDTNREAGTVSTGDYGRGDSAALFVAPKSAIGGSNLAD-----KGTMEGVIRKALSQKGENQYQSFKLKSVKDGITDDKGHKYYIAEFNYELLTGAGFIVERKGVASATQVGKSVQAVVAATTANRVKKMKPSLDEVARSFRIY 291
            R   +S A  DST+R    + A    G A+          P+ +  G     N KL+S  LP +   PDGF+ L E +G             ++R P+LV + +P  W+V  P++D N E GT+  G+YG+GD++  FV  +      N+AD     K   E V++KA+SQK  N YQ+FK+K+++    + K   Y I +F Y+L+TGAGF V+RK VAS T  G +V+A+  A+TA R KKM+P+L ++A SFR+Y
Sbjct:   30 RPSALSMAATDSTSRRNFFSNAAAVAGAAMTSSFLQGPTEPALALGGGIKKVNAKLASLGLPEMKKLPDGFSPLCELWGK-----------GANRFPLLVNFAHPLDWVVTTPSLDLNSEDGTIQAGEYGKGDTSTFFVYEEPG----NVADIASQPKSFFEDVLQKAISQKSANIYQNFKVKNIQPTKGEYKDQTYVIVDFQYQLVTGAGFEVDRKAVASVTSQGNAVEALWCASTAIRYKKMEPALRDIAGSFRVY 272          
BLAST of mRNA_H-paniculata_contig530.12695.1 vs. uniprot
Match: A0A7S3P7Q3_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3P7Q3_9STRA)

HSP 1 Score: 157 bits (397), Expect = 5.260e-43
Identity = 88/222 (39.64%), Postives = 131/222 (59.01%), Query Frame = 0
Query:   76 TVVPSASNA-GSTTDANKKLSSFDLPPIVDAPDGFNTLLESYGNKDASRDTSILGSSDRDPILVTWNYPKGWLVQAPTMDTNREAGTVSTGDYGRGDSAALFVAPKSAIGGSNLADKGTMEGVIRKALSQKGENQYQSFKLKSVKDGITDDKGHKYYIAEFNYELLTGAGFIVERKGVASATQVGKSVQAVVAATTANRVKKMKPSLDEVARSFRIYEGSFK 296
            T+ P  +NA G  +  N KL ++ LP +    DGF  +LE YG              +R PILVT+N+P  W++  P+ D N E GT+  GDY +GD++  +V  +       L+ K  ++ V+ K +SQKG+N Y++FK+  + D  T+  G  Y +A+F Y LLTGAGF+V+RKGVAS T  G +V+A+ AA+TA R KK + +L ++ +SFR Y    K
Sbjct:   47 TLAPEPANAIGGMSKVNAKLKAYGLPQVSKVADGFTPILEVYGK-----------GKNRFPILVTFNHPLSWVITLPSNDVNGEDGTIQVGDYAKGDTSTFYVYDEKGHVDLPLS-KEVVDTVLIKCISQKGDNMYENFKVTKL-DSFTEG-GQTYMLADFKYSLLTGAGFVVDRKGVASLTSEGPAVEALWAASTAIRYKKTEQTLRDIVKSFRCYTEGIK 254          
BLAST of mRNA_H-paniculata_contig530.12695.1 vs. uniprot
Match: A0A7R9WJF7_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9WJF7_9STRA)

HSP 1 Score: 155 bits (393), Expect = 3.910e-42
Identity = 86/215 (40.00%), Postives = 128/215 (59.53%), Query Frame = 0
Query:   82 SNAGSTTDANKKLSSFDLPPIVDAPDGFNTLLESYGNKDASRDTSILGSSDRDPILVTWNYPKGWLVQAPTMDTNREAGTVSTGDYGRGDSAALFVAPKSAIGGSNLAD-----KGTMEGVIRKALSQKGENQYQSFKLKSVKDGITDDKGHKYYIAEFNYELLTGAGFIVERKGVASATQVGKSVQAVVAATTANRVKKMKPSLDEVARSFRIY 291
            ++A   +  N KL +  LP +   PDGF+ LLE +G             ++R P+LV + +P  W+V  P++D N E GTV  G+YG+GD+A  FV         N+AD     K   E V++KA+SQK  N YQ+FK+ +++      +   Y I +F Y+L+TGAGF V+RK VAS T  GK+V+A+  A+TA R KK++P+L ++A SFR+Y
Sbjct:   73 AHAAKLSKVNAKLEALGLPAMGKVPDGFSPLLELWGK-----------GANRFPLLVNFAHPLDWVVTTPSLDLNSEDGTVQAGEYGKGDTATFFVYEDEG----NVADIASQPKSFFENVLQKAISQKSANIYQNFKVTNIQPTKGGYQDQTYMIVDFKYQLVTGAGFEVDRKAVASVTSQGKAVEALWCASTAVRYKKLEPALRDIASSFRVY 272          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig530.12695.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LLI1_ECTSI6.760e-11462.59Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835Z8Y2_9STRA8.270e-6249.31Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A4D9DCV0_9STRA5.290e-4942.15Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
W7TXP4_9STRA4.810e-4841.70Uncharacterized protein n=3 Tax=Nannochloropsis ga... [more]
A0A7S2V7M0_9STRA6.240e-4842.66Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S2RLR6_9STRA1.240e-4543.67Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
F0YP05_AURAN1.910e-4340.83Expressed protein n=1 Tax=Aureococcus anophageffer... [more]
A0A7S4MBN6_9STRA2.540e-4337.60Hypothetical protein n=2 Tax=Odontella aurita TaxI... [more]
A0A7S3P7Q3_9STRA5.260e-4339.64Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]
A0A7R9WJF7_9STRA3.910e-4240.00Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR016123Mog1/PsbP, alpha/beta/alpha sandwichGENE3D3.40.1000.10coord: 138..291
e-value: 6.6E-7
score: 31.0
IPR002683PsbP, C-terminalPFAMPF01789PsbPcoord: 183..290
e-value: 3.4E-5
score: 24.0
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 7..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..6
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 24..296
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..23
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 19..23
NoneNo IPR availableTMHMMTMhelixcoord: 60..82
NoneNo IPR availableTMHMMTMhelixcoord: 7..29
IPR020587DNA recombination and repair protein RecA, monomer-monomer interfacePROSITEPS50163RECA_3coord: 173..245
score: 8.798

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig530contigH-paniculata_contig530:13347..22491 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig530.12695.1mRNA_H-paniculata_contig530.12695.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig530 12446..22520 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig530.12695.1 ID=prot_H-paniculata_contig530.12695.1|Name=mRNA_H-paniculata_contig530.12695.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=297bp
MKTFRSASAAYGAIMVAGNGVQAFIAPALPTHASTTRQVTSSRVMCMSAA
TEDSTTRAEALGAMGTALLGIIAGVTVVPSASNAGSTTDANKKLSSFDLP
PIVDAPDGFNTLLESYGNKDASRDTSILGSSDRDPILVTWNYPKGWLVQA
PTMDTNREAGTVSTGDYGRGDSAALFVAPKSAIGGSNLADKGTMEGVIRK
ALSQKGENQYQSFKLKSVKDGITDDKGHKYYIAEFNYELLTGAGFIVERK
GVASATQVGKSVQAVVAATTANRVKKMKPSLDEVARSFRIYEGSFK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016123Mog1/PsbP_a/b/a-sand
IPR002683PsbP_C
IPR020587RecA_monomer-monomer_interface