prot_H-paniculata_contig5297.12685.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig5297.12685.1
Unique Nameprot_H-paniculata_contig5297.12685.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length186
Homology
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BLAST of mRNA_H-paniculata_contig5297.12685.1 vs. uniprot
Match: A0A6H5LKZ1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LKZ1_9PHAE)

HSP 1 Score: 59.7 bits (143), Expect = 3.890e-7
Identity = 30/57 (52.63%), Postives = 40/57 (70.18%), Query Frame = 0 
Query:    2 IPDEIIDMAKESAAYEDVSGVITAVYATRYGNHPNEKNALTSPPAWVRQLASISRAA 58
            +P++++ +AKE   YEDVSGVITAVYA RYG     K    + P WVRQ+AS++R A
Sbjct:  539 MPEDVLKVAKECVVYEDVSGVITAVYAARYGTDAAGK--APAVPLWVRQMASLARLA 593
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5297.12685.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5LKZ1_9PHAE3.890e-752.63Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5297contigH-paniculata_contig5297:2815..5223 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5297.12685.1mRNA_H-paniculata_contig5297.12685.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig5297 2745..5586 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig5297.12685.1 ID=prot_H-paniculata_contig5297.12685.1|Name=mRNA_H-paniculata_contig5297.12685.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=186bp
MIPDEIIDMAKESAAYEDVSGVITAVYATRYGNHPNEKNALTSPPAWVRQ
LASISRAASSRADNAQAEAAADVPGAEGVAHMYSTNDDTTGEGSLRGRGS
GSGSGGGGGGSVRGGGCWGWRRPAIVVQRRWATAGCDVDVRGGGGGGVSV
RYWQSSRDGRSGSHGVERCGAFRLRRLGSGRAYGR*
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