prot_H-paniculata_contig5297.12684.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig5297.12684.1
Unique Nameprot_H-paniculata_contig5297.12684.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length113
Homology
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BLAST of mRNA_H-paniculata_contig5297.12684.1 vs. uniprot
Match: A0A6H5LKZ1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LKZ1_9PHAE)

HSP 1 Score: 78.6 bits (192), Expect = 1.160e-14
Identity = 48/79 (60.76%), Postives = 52/79 (65.82%), Query Frame = 0 
Query:    6 QALAETNALLARALALHFAVDTSASWGSGGG--LRRACCELAFQDVADVRTMVGSTSSPPALLGVPGVGGEGNGEEQQS 82
             AL ETNALLA ALALHFA D S       G  +R ACC LAFQDVADVR M+  T +PPALLGV  VG E  G+ Q S
Sbjct:  389 NALTETNALLAGALALHFAGDASGGGRGXXGEAVRAACCALAFQDVADVRAMLCGTGAPPALLGVLRVGDESPGKSQPS 467
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5297.12684.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5LKZ1_9PHAE1.160e-1460.76Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..20
score: 0.523

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5297contigH-paniculata_contig5297:1417..2301 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5297.12684.1mRNA_H-paniculata_contig5297.12684.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig5297 1417..2301 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig5297.12684.1 ID=prot_H-paniculata_contig5297.12684.1|Name=mRNA_H-paniculata_contig5297.12684.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=113bp
MIFFFQALAETNALLARALALHFAVDTSASWGSGGGLRRACCELAFQDVA
DVRTMVGSTSSPPALLGVPGVGGEGNGEEQQSEPSSDVSSTSEDKRPIND
SRKTFGPFAEPEQ
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