prot_H-paniculata_contig52945.12681.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig52945.12681.1
Unique Nameprot_H-paniculata_contig52945.12681.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length62
Homology
BLAST of mRNA_H-paniculata_contig52945.12681.1 vs. uniprot
Match: A0A5E8C122_9ASCO (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Saprochaete ingens TaxID=2606893 RepID=A0A5E8C122_9ASCO)

HSP 1 Score: 67.8 bits (164), Expect = 9.680e-12
Identity = 32/62 (51.61%), Postives = 43/62 (69.35%), Query Frame = 0
Query:    1 LPAGRKAICTKWILKRKLKEDGRVACYKTQLEAQGFSHVEGEDFVETRAPLARMSTLYTVFS 62
            LPAGRKA+ TKW+LK+KL  DG +  YK +L  QGF    G D+V+T AP+ R ST+  +F+
Sbjct:  326 LPAGRKALGTKWVLKKKLNTDGSIDKYKARLVVQGFRQKFGVDYVDTFAPVMRFSTVRLIFA 387          
BLAST of mRNA_H-paniculata_contig52945.12681.1 vs. uniprot
Match: A0A5E8C1Z7_9ASCO (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Saprochaete ingens TaxID=2606893 RepID=A0A5E8C1Z7_9ASCO)

HSP 1 Score: 67.8 bits (164), Expect = 9.740e-12
Identity = 32/62 (51.61%), Postives = 43/62 (69.35%), Query Frame = 0
Query:    1 LPAGRKAICTKWILKRKLKEDGRVACYKTQLEAQGFSHVEGEDFVETRAPLARMSTLYTVFS 62
            LPAGRKA+ TKW+LK+KL  DG +  YK +L  QGF    G D+V+T AP+ R ST+  +F+
Sbjct:  616 LPAGRKALGTKWVLKKKLNTDGSIDKYKARLVVQGFRQKFGVDYVDTFAPVMRFSTVRLIFA 677          
BLAST of mRNA_H-paniculata_contig52945.12681.1 vs. uniprot
Match: A0A5E8BZM0_9ASCO (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Saprochaete ingens TaxID=2606893 RepID=A0A5E8BZM0_9ASCO)

HSP 1 Score: 67.8 bits (164), Expect = 9.740e-12
Identity = 32/62 (51.61%), Postives = 43/62 (69.35%), Query Frame = 0
Query:    1 LPAGRKAICTKWILKRKLKEDGRVACYKTQLEAQGFSHVEGEDFVETRAPLARMSTLYTVFS 62
            LPAGRKA+ TKW+LK+KL  DG +  YK +L  QGF    G D+V+T AP+ R ST+  +F+
Sbjct:  929 LPAGRKALGTKWVLKKKLNTDGSIDKYKARLVVQGFRQKFGVDYVDTFAPVMRFSTVRLIFA 990          
BLAST of mRNA_H-paniculata_contig52945.12681.1 vs. uniprot
Match: A0A5E8C4M5_9ASCO (Integrase catalytic domain-containing protein n=1 Tax=Saprochaete ingens TaxID=2606893 RepID=A0A5E8C4M5_9ASCO)

HSP 1 Score: 67.8 bits (164), Expect = 9.780e-12
Identity = 32/62 (51.61%), Postives = 43/62 (69.35%), Query Frame = 0
Query:    1 LPAGRKAICTKWILKRKLKEDGRVACYKTQLEAQGFSHVEGEDFVETRAPLARMSTLYTVFS 62
            LPAGRKA+ TKW+LK+KL  DG +  YK +L  QGF    G D+V+T AP+ R ST+  +F+
Sbjct: 1521 LPAGRKALGTKWVLKKKLNTDGSIDKYKARLVVQGFRQKFGVDYVDTFAPVMRFSTVRLIFA 1582          
BLAST of mRNA_H-paniculata_contig52945.12681.1 vs. uniprot
Match: A0A5E8C1N6_9ASCO (Integrase catalytic domain-containing protein n=3 Tax=Saprochaete ingens TaxID=2606893 RepID=A0A5E8C1N6_9ASCO)

HSP 1 Score: 67.8 bits (164), Expect = 9.780e-12
Identity = 32/62 (51.61%), Postives = 43/62 (69.35%), Query Frame = 0
Query:    1 LPAGRKAICTKWILKRKLKEDGRVACYKTQLEAQGFSHVEGEDFVETRAPLARMSTLYTVFS 62
            LPAGRKA+ TKW+LK+KL  DG +  YK +L  QGF    G D+V+T AP+ R ST+  +F+
Sbjct: 1909 LPAGRKALGTKWVLKKKLNTDGSIDKYKARLVVQGFRQKFGVDYVDTFAPVMRFSTVRLIFA 1970          
BLAST of mRNA_H-paniculata_contig52945.12681.1 vs. uniprot
Match: A0A5E8BE48_9ASCO (Integrase catalytic domain-containing protein n=1 Tax=Saprochaete ingens TaxID=2606893 RepID=A0A5E8BE48_9ASCO)

HSP 1 Score: 67.8 bits (164), Expect = 9.790e-12
Identity = 32/62 (51.61%), Postives = 43/62 (69.35%), Query Frame = 0
Query:    1 LPAGRKAICTKWILKRKLKEDGRVACYKTQLEAQGFSHVEGEDFVETRAPLARMSTLYTVFS 62
            LPAGRKA+ TKW+LK+KL  DG +  YK +L  QGF    G D+V+T AP+ R ST+  +F+
Sbjct: 1107 LPAGRKALGTKWVLKKKLNTDGSIDKYKARLVVQGFRQKFGVDYVDTFAPVMRFSTVRLIFA 1168          
BLAST of mRNA_H-paniculata_contig52945.12681.1 vs. uniprot
Match: A0A5E8C8U5_9ASCO (Uncharacterized protein n=2 Tax=Saprochaete ingens TaxID=2606893 RepID=A0A5E8C8U5_9ASCO)

HSP 1 Score: 67.8 bits (164), Expect = 9.790e-12
Identity = 32/62 (51.61%), Postives = 43/62 (69.35%), Query Frame = 0
Query:    1 LPAGRKAICTKWILKRKLKEDGRVACYKTQLEAQGFSHVEGEDFVETRAPLARMSTLYTVFS 62
            LPAGRKA+ TKW+LK+KL  DG +  YK +L  QGF    G D+V+T AP+ R ST+  +F+
Sbjct: 2401 LPAGRKALGTKWVLKKKLNTDGSIDKYKARLVVQGFRQKFGVDYVDTFAPVMRFSTVRLIFA 2462          
BLAST of mRNA_H-paniculata_contig52945.12681.1 vs. uniprot
Match: A0A5E8C189_9ASCO (Uncharacterized protein n=1 Tax=Saprochaete ingens TaxID=2606893 RepID=A0A5E8C189_9ASCO)

HSP 1 Score: 67.8 bits (164), Expect = 9.810e-12
Identity = 32/62 (51.61%), Postives = 43/62 (69.35%), Query Frame = 0
Query:    1 LPAGRKAICTKWILKRKLKEDGRVACYKTQLEAQGFSHVEGEDFVETRAPLARMSTLYTVFS 62
            LPAGRKA+ TKW+LK+KL  DG +  YK +L  QGF    G D+V+T AP+ R ST+  +F+
Sbjct: 3494 LPAGRKALGTKWVLKKKLNTDGSIDKYKARLVVQGFRQKFGVDYVDTFAPVMRFSTVRLIFA 3555          
BLAST of mRNA_H-paniculata_contig52945.12681.1 vs. uniprot
Match: A0A177U0C1_9BASI (Integrase catalytic domain-containing protein n=2 Tax=Tilletia TaxID=13289 RepID=A0A177U0C1_9BASI)

HSP 1 Score: 67.4 bits (163), Expect = 1.330e-11
Identity = 33/57 (57.89%), Postives = 41/57 (71.93%), Query Frame = 0
Query:    1 LPAGRKAICTKWILKRKLKEDGRVACYKTQLEAQGFSHVEGEDFVETRAPLARMSTL 57
            LP  RKA+ ++W+ K KL EDG+ A  K +L AQGFS VEG DF ET AP+AR+ TL
Sbjct:  749 LPPNRKAVGSRWVYKLKLDEDGKAARRKARLVAQGFSQVEGIDFTETFAPVARLDTL 805          
BLAST of mRNA_H-paniculata_contig52945.12681.1 vs. uniprot
Match: A0A6L2LFG9_TANCI (Zinc finger, CCHC-type n=1 Tax=Tanacetum cinerariifolium TaxID=118510 RepID=A0A6L2LFG9_TANCI)

HSP 1 Score: 66.6 bits (161), Expect = 2.010e-11
Identity = 33/57 (57.89%), Postives = 41/57 (71.93%), Query Frame = 0
Query:    1 LPAGRKAICTKWILKRKLKEDGRVACYKTQLEAQGFSHVEGEDFVETRAPLARMSTL 57
            LP G KA+  KWILKRK+K DG +  YK +L  QGF   EG DFV+T AP+AR+ST+
Sbjct:   31 LPPGCKALGCKWILKRKMKVDGSIDKYKARLVIQGFRQKEGIDFVDTYAPVARISTI 87          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig52945.12681.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A5E8C122_9ASCO9.680e-1251.61Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A5E8C1Z7_9ASCO9.740e-1251.61Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A5E8BZM0_9ASCO9.740e-1251.61Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A5E8C4M5_9ASCO9.780e-1251.61Integrase catalytic domain-containing protein n=1 ... [more]
A0A5E8C1N6_9ASCO9.780e-1251.61Integrase catalytic domain-containing protein n=3 ... [more]
A0A5E8BE48_9ASCO9.790e-1251.61Integrase catalytic domain-containing protein n=1 ... [more]
A0A5E8C8U5_9ASCO9.790e-1251.61Uncharacterized protein n=2 Tax=Saprochaete ingens... [more]
A0A5E8C189_9ASCO9.810e-1251.61Uncharacterized protein n=1 Tax=Saprochaete ingens... [more]
A0A177U0C1_9BASI1.330e-1157.89Integrase catalytic domain-containing protein n=2 ... [more]
A0A6L2LFG9_TANCI2.010e-1157.89Zinc finger, CCHC-type n=1 Tax=Tanacetum cinerarii... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 1..56
e-value: 7.6E-10
score: 38.8

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig52945contigH-paniculata_contig52945:1019..1204 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig52945.12681.1mRNA_H-paniculata_contig52945.12681.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig52945 1019..1204 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig52945.12681.1 ID=prot_H-paniculata_contig52945.12681.1|Name=mRNA_H-paniculata_contig52945.12681.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=62bp
LPAGRKAICTKWILKRKLKEDGRVACYKTQLEAQGFSHVEGEDFVETRAP
LARMSTLYTVFS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2