mRNA_H-paniculata_contig5291.12677.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig5291.12677.1
Unique NamemRNA_H-paniculata_contig5291.12677.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig5291.12677.1 vs. uniprot
Match: A0A6H5JZC9_9PHAE (RanBP2-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZC9_9PHAE)

HSP 1 Score: 206 bits (523), Expect = 1.870e-51
Identity = 217/618 (35.11%), Postives = 283/618 (45.79%), Query Frame = 3
Query:  594 RCMFTSQKTKKRKVWSDGAVKCCSKRQRVSLYRWSDVLGVTDKLLGEVYLSVPEYKAFVNNGEPELEMELYIVSLDGVIQE------------APLTAEGSIGSTTDTAGAGSAAHGRKRKLLKPFKPPSRTAPPAAP-PLDSWGARRNGNRLVDGGNVPNGERDSQGEAR-------NGLKSRSCYTGFGHVASLWEDDDDDEIA----EGSAGLSAASGGSGSGWGLHNEGSGRGPQDRHDPGYKGLISDNSSRGGGTGFAGSIPDGAARMVQLSAAATTIPTACNGRVVDTWRRHDDLRAPDNSYSSHDSAEHSVRQNSARYRGASDDGCAESVSDGHVHDRQSIQGHEPYTERNPGEHKQATGGRYVDETGIDREGRNGKSHRGQSYYEEEE----DGVGVAQADHGTLHQHGDFSAHAVGYSMEKHQAIEGRSSEHGSHEGRDGCEEGHTRSTQDILSLFGGLGNSPLDEPSVSAPDSARDLSSA---APSESSLMAPGDPRSQAPGQEHPPPGIGNEAVLRGRGTAADMRRAQRAAREAQQQDRIVAVVDAAESTPATTHSANSAPAV-GPWDCAVCGVHGTPSALSCRVCGAQRPREIGNCRGVSSAEEDG 2351
            RCM+T+QKTKKRK WSDGAVKCC KRQRVSLYRWS+ LGVT+KLLGEVYL+VP+Y+AF+  GEPELEMELYIVSLDGVIQ                                     +KRK+ K FKPP+R  P  AP P DSWG      RL  GG    G  D  G+ R         L  R+ YTGFGHV SLW++D++++      E  AGL+       +GWG+    +G G Q+ +D G +  +   +          ++     R    SA  +T  T   G           LR    S S+ D A  S  Q   + RG               HD  ++ GH  + E  P  + +       D+  + R        R  S+Y E +    DG   A    G   ++     +A+G           R SE    E          RSTQDILSLFGG G +P  +      +  R+ + +    P+E+ L       SQA G    P G G   + R    A DMRR Q+ AR A         V  A +  A+   A++  AV G W C  CGV G  S+ SCRVCGA+R +E+    GV+   +DG
Sbjct:  144 RCMYTNQKTKKRKTWSDGAVKCCPKRQRVSLYRWSEALGVTEKLLGEVYLTVPQYEAFITQGEPELEMELYIVSLDGVIQSDDNAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKRKIFKAFKPPARREPTPAPQPDDSWG------RLPPGGVSLRGNGDRGGDGRFPSNRGGGKLSPRTTYTGFGHVESLWDEDEEEDDGQDRHEDGAGLADEHR---AGWGMGGA-AGPGYQNPYDVGNESDVLQQARS------EAAVQPPYHRSTGTSAVGST-NTWMWGPPAGEHSLDGPLRP---SRSTADFASGSPAQQQQQERGR--------------HDETAVPGH--HGEDGPSSYLERLRRGNDDDDDVGR--------RSASHYPENQRCGRDGAVTAAGGTGGREENTFGRGNAIG-------GAGSRVSEEVDRETPGDGARMEMRSTQDILSLFGGFGGTPSTQGGHDHGEQERETAESQWRGPTEAPLG------SQASGDALMPVGGG---IRR----AVDMRRTQKEARAAXXXXXXXXXVAGAVTGAASARGASNDDAVTGDWACGTCGVRGGSSSASCRVCGAKR-QEL-RSDGVAQGGDDG 695          
BLAST of mRNA_H-paniculata_contig5291.12677.1 vs. uniprot
Match: D8LRG4_ECTSI (RanBP2-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRG4_ECTSI)

HSP 1 Score: 134 bits (337), Expect = 2.100e-29
Identity = 73/129 (56.59%), Postives = 87/129 (67.44%), Query Frame = 3
Query:  453 RKAADSTE----DLLQPSG-SGFETILPTGETSSKNSARSADGGFDSTVQTLRCMFTSQKTKKRKVWSDGAVKCCSKRQRVSLYRWSDVLGVTDKLLGEVYLSVPEYKAFVNNGEPELEMELYIVSLDG 824
            RKA+ S      D+   +G S    +  T  T++   A    GG D     LRCM+T+QKTKKRK WSDGAVKCC KRQRVSLYRWS+ LGVT+KLLGEVYL+VP+Y+AF+  GEPELEMEL     DG
Sbjct:   36 RKASSSKSLRPYDIPYATGNSNAAAVNTTAGTAASAEAGKVPGGIDDKGIVLRCMYTNQKTKKRKTWSDGAVKCCPKRQRVSLYRWSEALGVTEKLLGEVYLTVPQYEAFITQGEPELEMELLRRGDDG 164          
BLAST of mRNA_H-paniculata_contig5291.12677.1 vs. uniprot
Match: A0A835YK32_9STRA (DUF2439 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YK32_9STRA)

HSP 1 Score: 129 bits (325), Expect = 3.220e-27
Identity = 80/203 (39.41%), Postives = 109/203 (53.69%), Query Frame = 3
Query:  585 QTLRCMFTSQKTKKRKVWSDGAVKCCSKRQRVSLYRWSDVLGVTDKLLGEVYLSVPEYKAFVNNGEPELEMELYIVSLDGVIQEAPLTAEGSIGSTTDTAGAGSAAHGRKRKLLKPFKPPSRTAPPAAPPLDSWGARRNGNRLV-------------DGGNVPNGERDSQGEARNGLKSRSCYTGFGHVASLWEDDDDDEIAE 1154
            Q LRC+FTSQ TKKRK W DGAV+CC+KR  V+LY+WSD LGVT+K LGE +L+  E+ AFV   EPELEME Y+V+L+GV +    T+ G    +++  GA       K+  LK +K P++   PA P  D    R                     GG        +Q    NG  + +   GFG ++SLW+D+  D   +
Sbjct:    9 QVLRCLFTSQLTKKRKTWQDGAVRCCAKRLSVTLYKWSDTLGVTEKTLGESFLNAAEFNAFVTQKEPELEMEKYLVTLEGVTENT-YTSNGDSQQSSEGGGAA------KKPKLKGWKAPTKVTVPARPSDDDVYERLRQQXXXXXXXXXXXXXXGYSGGMQQ--RAGAQAAVGNGRCAGAISNGFGRLSSLWDDEGADRTPD 202          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5291.12677.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5JZC9_9PHAE1.870e-5135.11RanBP2-type domain-containing protein n=1 Tax=Ecto... [more]
D8LRG4_ECTSI2.100e-2956.59RanBP2-type domain-containing protein n=1 Tax=Ecto... [more]
A0A835YK32_9STRA3.220e-2739.41DUF2439 domain-containing protein n=1 Tax=Tribonem... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5291contigH-paniculata_contig5291:4277..10110 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons4
Model size3130
Cds size2676
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5291.12677.1prot_H-paniculata_contig5291.12677.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig5291 4513..9892 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930532.9653504-UTR-H-paniculata_contig5291:4276..45121622930532.9653504-UTR-H-paniculata_contig5291:4276..4512Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig5291 4277..4512 -
1691481335.2669628-UTR-H-paniculata_contig5291:4276..45121691481335.2669628-UTR-H-paniculata_contig5291:4276..4512Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig5291 4277..4512 -
1622930533.0551946-UTR-H-paniculata_contig5291:9892..101101622930533.0551946-UTR-H-paniculata_contig5291:9892..10110Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig5291 9893..10110 -
1691481335.3124385-UTR-H-paniculata_contig5291:9892..101101691481335.3124385-UTR-H-paniculata_contig5291:9892..10110Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig5291 9893..10110 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930532.9818287-CDS-H-paniculata_contig5291:4512..50381622930532.9818287-CDS-H-paniculata_contig5291:4512..5038Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5291 4513..5038 -
1691481335.2762368-CDS-H-paniculata_contig5291:4512..50381691481335.2762368-CDS-H-paniculata_contig5291:4512..5038Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5291 4513..5038 -
1622930532.9977572-CDS-H-paniculata_contig5291:6405..79711622930532.9977572-CDS-H-paniculata_contig5291:6405..7971Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5291 6406..7971 -
1691481335.284257-CDS-H-paniculata_contig5291:6405..79711691481335.284257-CDS-H-paniculata_contig5291:6405..7971Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5291 6406..7971 -
1622930533.0153415-CDS-H-paniculata_contig5291:8464..86711622930533.0153415-CDS-H-paniculata_contig5291:8464..8671Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5291 8465..8671 -
1691481335.292595-CDS-H-paniculata_contig5291:8464..86711691481335.292595-CDS-H-paniculata_contig5291:8464..8671Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5291 8465..8671 -
1622930533.034245-CDS-H-paniculata_contig5291:9515..98921622930533.034245-CDS-H-paniculata_contig5291:9515..9892Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5291 9516..9892 -
1691481335.302993-CDS-H-paniculata_contig5291:9515..98921691481335.302993-CDS-H-paniculata_contig5291:9515..9892Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5291 9516..9892 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig5291.12677.1

>prot_H-paniculata_contig5291.12677.1 ID=prot_H-paniculata_contig5291.12677.1|Name=mRNA_H-paniculata_contig5291.12677.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=892bp
MRRSGGERPPFANGRPMHIRRGNTAPGNDYPGVNQPLLFATENLNPGGKA
GRVHVNGHAQSSPAHENRTPPAHSGWTARKAADSTEDLLQPSGSGFETIL
PTGETSSKNSARSADGGFDSTVQTLRCMFTSQKTKKRKVWSDGAVKCCSK
RQRVSLYRWSDVLGVTDKLLGEVYLSVPEYKAFVNNGEPELEMELYIVSL
DGVIQEAPLTAEGSIGSTTDTAGAGSAAHGRKRKLLKPFKPPSRTAPPAA
PPLDSWGARRNGNRLVDGGNVPNGERDSQGEARNGLKSRSCYTGFGHVAS
LWEDDDDDEIAEGSAGLSAASGGSGSGWGLHNEGSGRGPQDRHDPGYKGL
ISDNSSRGGGTGFAGSIPDGAARMVQLSAAATTIPTACNGRVVDTWRRHD
DLRAPDNSYSSHDSAEHSVRQNSARYRGASDDGCAESVSDGHVHDRQSIQ
GHEPYTERNPGEHKQATGGRYVDETGIDREGRNGKSHRGQSYYEEEEDGV
GVAQADHGTLHQHGDFSAHAVGYSMEKHQAIEGRSSEHGSHEGRDGCEEG
HTRSTQDILSLFGGLGNSPLDEPSVSAPDSARDLSSAAPSESSLMAPGDP
RSQAPGQEHPPPGIGNEAVLRGRGTAADMRRAQRAAREAQQQDRIVAVVD
AAESTPATTHSANSAPAVGPWDCAVCGVHGTPSALSCRVCGAQRPREIGN
CRGVSSAEEDGNGSDSRYDASAASCKSGESAQQQNEQESDGGVKFGDSWT
QNPFQHSGEGQHVFPDDAEQQYEHDDGELEKRAPVGELRMPVQAGGLAWH
GLREVSPANDSGRDKGCDAAGRPSHHNAATPGGWPRDSSTTRKDQRQGTM
LFTATASICRMEADAGGVLQRRPGGGMSVDVGSLSDSDNDV*
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mRNA from alignment at H-paniculata_contig5291:4277..10110-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig5291.12677.1 ID=mRNA_H-paniculata_contig5291.12677.1|Name=mRNA_H-paniculata_contig5291.12677.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=5834bp|location=Sequence derived from alignment at H-paniculata_contig5291:4277..10110- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CCTAGCCGAGGGCATACCATCTGAACCTGATGCAAACACCAGGAAAAGAT AGAGTTTCTGTTGGACCAGAATCCTCTGTAGGCATCTACATAATTTGAAA TAGTGCTGTGCACGGTTGCTCAACACCGCCATTCAGAGTAGTAGCAGCTT CATCTGAAGACGGCAGCCGACCGACTGACATTGCTGCAGCTACAGTATCG TATGCAGTTGTGCTGAGGATGCGTAGATCAGGTGGAGAACGACCCCCTTT CGCAAACGGGCGCCCTATGCACATCCGCAGAGGCAACACCGCCCCTGGCA ATGATTACCCTGGAGTTAACCAGCCATTGCTCTTTGCAACAGAAAACCTG AACCCGGGGGGAAAAGCGGGACGAGTCCATGTCAACGGACACGCACAGTC CAGCCCAGCGCACGAGAACAGGACTCCACCTGCGCACTCAGGGTGGACAG CAAGAAAGGCTGCTGACTCTACCGAGGACTTGCTGCAGCCCTCAGGTTCA GGGTTCGAAACGATATTGCCAACAGGGGAAACGTCAAGCAAAAACAGCGC GAGGAGCGCTGATGGTGGATTTGATTCGACCGTACAAACCTTGAGGTACT TGGTGAAGTGCAAGGTTTGGTGTCGGTCTCATCGCACCATGAATCCATAT GATTATATCGTTCGACGAAACTCATCCACAATATAGGACAATGCAGTGGA AATCCTCCTCTGTGTGGCCTAAAAATAGAATACAGTGATTCCATCAGCGG TATGGTAACATGATTTACATTTTTCACTCTCCCTTCAGTCATCCAGACAG TGTAGCGGGGTCATTCTCCAACAGCTCGTACACATGCTTTGCAGCAAAAA AAGTGTTTTCGGGGACACAAGAGTTTTTTTTTGTGTTGCCTACAAACCTC AGTCGAACAAACCACCTGTACAATAACACACTAAAAAACAAAGATATAGG CACCCTCAGTAATCTATTTGCACTTCAACGACCTGGAAAACCTCGATAAG ATGCTTTCCTGCGCTGAGGTACTAGTTATGCCAGTTGTTGATAGGTTCTT TACTAAAACTAGTAACTATGACATCACAAGTGTACTCGGGGATACTTTGT GAGACTGTACTCTGTGCTTGTTGTTTGATATGTGCAGGGTTTTCAAGGTT GCTATTTTAGCGGTCTGACCAAACTCCATACAATGTGTGAAGACATTTTC AATTGCCCCGCAAAGTCGAAAACGGACACAAAGTTGACAACATGCCCCCA AGGTACCGCAGAGATTACGTGGCCCTCTTTCCGTAATACCTGATAGAATA TTTTCTGATTCATCTCAACGACACTTTCCCTGTATGCGGGATGCATCTTT GGCCGGAAAGCAAGTTCTATCCACCTGTCGCTTTCCCCCATCTCATAAAT TTTTATTGTCCACTATACGAACCGTCCGTACTGTACCAGGTGTATGTTCA CCAGCCAGAAAACCAAGAAGAGGAAAGTGTGGTCTGACGGCGCGGTCAAG TGCTGCTCGAAGCGCCAACGAGTGTCTCTGTACCGGTGGAGCGACGTGCT CGGGGTTACCGACAAGCTTCTGGGCGAGGTTTACCTCTCCGTGCCAGAGT ACAAGGCGTTTGTTAATAACGGGGAGCCAGAACTCGAAATGGAGCTGTAA GTGTTTTTGTTATCGAAACTCGGGATACACGCATTTCTGCGTTATATCGC CCGCTCGGTCGCTGTTCTTCACTCGCAATCACGCAAGTTTCTCACTCGTT GCATTCCCTGCAATTTGTATTTTCTCCTTATGTGTCCTCCGTTGTACTGT TCTGCCAGTATTTTTCCAACATACGATTATATAAAAAACGAGAGAACGAT CATTCCATTACCATCTGATAGACATACCACAGTTGCAAGTTAGTGTAGGG GTGCAAAATTTAACTGCGCCATCGAGATCTCCACGAAGAGCACTCGTTGC CAGTCGAAATTAGACGGAAGCAACTTTCTCGGCACTTGCCAAGATAGTAG TACAGGGGAATACATTTTCCTTTCCTCCCTCTCTCTCTCCTACCCCAGTC AATAGCCTTTGACGTTGCACGTGTTTTCGTTAGTACAGCCAACGGTATAA TTCTGCGGTACTTTGTCGATGTGTTACAAACCATGACAGATATATCGTCT CATTGGACGGTGTCATTCAGGAGGCACCGCTTACTGCCGAAGGCTCGATC GGTAGCACCACGGACACAGCTGGGGCTGGAAGCGCAGCCCATGGTCGAAA ACGAAAATTACTGAAACCTTTTAAACCCCCCTCGAGGACGGCACCTCCCG CGGCGCCGCCTCTAGATTCTTGGGGAGCCCGGAGGAACGGCAACCGATTG GTGGATGGCGGGAATGTTCCAAATGGAGAACGAGACTCACAGGGTGAAGC AAGGAATGGGTTGAAGTCCCGCTCATGCTACACCGGATTCGGTCACGTAG CTTCCTTGTGGGAGGACGACGATGATGACGAAATTGCTGAGGGCTCTGCT GGGTTGAGTGCAGCTTCAGGTGGTAGTGGCAGTGGTTGGGGACTGCACAA CGAGGGCAGCGGTCGCGGTCCTCAAGATAGACATGACCCAGGATATAAGG GGTTGATCAGTGACAACAGTAGCCGTGGAGGAGGAACTGGCTTCGCAGGC TCAATTCCCGATGGTGCTGCCCGAATGGTGCAGTTGTCAGCAGCTGCCAC GACCATCCCTACTGCATGCAACGGGAGGGTAGTGGACACGTGGCGAAGGC ACGATGACCTGCGTGCGCCTGACAACAGCTACAGCTCGCACGACTCGGCC GAACACTCTGTCCGGCAAAACAGTGCTCGCTACAGAGGCGCATCCGACGA TGGATGCGCGGAATCTGTCAGCGATGGACACGTGCACGACAGGCAGAGCA TCCAGGGACACGAGCCCTACACCGAGCGAAATCCAGGAGAACATAAGCAG GCCACGGGTGGGAGGTACGTAGATGAGACGGGGATCGACAGGGAAGGAAG AAATGGCAAGAGTCACCGCGGACAGAGCTACTACGAGGAAGAGGAAGACG GCGTCGGTGTGGCACAGGCGGACCATGGCACTTTACACCAGCATGGTGAT TTTTCCGCTCATGCTGTCGGTTATTCGATGGAGAAGCACCAAGCTATCGA AGGTCGTTCCTCCGAGCACGGGTCGCACGAGGGGAGGGACGGATGCGAAG AAGGTCACACCCGATCTACGCAAGACATCCTGTCACTTTTCGGGGGGTTG GGAAACTCTCCCCTTGATGAGCCCTCTGTGAGTGCACCGGATTCAGCAAG AGATTTGTCGTCAGCGGCGCCATCGGAGTCCTCCTTGATGGCTCCGGGTG ACCCCAGATCACAAGCACCAGGTCAAGAACACCCACCGCCTGGGATTGGG AACGAAGCTGTGCTGAGAGGCAGGGGCACAGCGGCCGATATGAGGCGCGC ACAGAGAGCTGCGCGCGAAGCGCAACAACAAGATCGCATTGTAGCTGTGG TCGATGCTGCTGAAAGCACGCCCGCGACTACCCACTCGGCAAACAGTGCG CCTGCCGTTGGCCCGTGGGATTGTGCTGTTTGCGGGGTGCACGGGACTCC GTCGGCGTTATCGTGCCGAGTATGCGGGGCTCAACGGCCGAGGGAGATTG GGAATTGTCGAGGAGTGAGCAGTGCGGAAGAAGACGGGAATGGCAGTGAC TCCAGGTGCGGGCGCAATGGAGGGCTGTTGACAGGTCGTGCAAGCACAGT TGTACGAACGTGTATGTTACAAGCGCATGATGGTCACTTGATGGGTTGGA CACGTGAGAAGCTGTTAATCGTCACCTTCTGTTTGGAGCTGTCAACAACC GAAACTCACACTTTCGTTTCTATACATGTAATTGTGCTACAGCTACCCAC AATCTATTCTTCAACTAGTACATTAGTATACTTTGGGTTCAAGCGAGCAA GTTAATGGACCAGGGTGCAAATCATTTGAGTACTCAGGGTGGTACGACGC TAAAAAAGACTGTCTTTCGTGACGATAAGCATCCAGTTGTCAGAAGTGAT ATCATGAAGCCCCATCCCCCTCAAAGCCTCTCTCAGCTTCGTCAAGAATA ACATATCTTTTCCCTCTTGCTTGAACGGTGAAATGCACCATCTTCGCTGC ATACACACGCTCACGTCGCCAGTCCAAGGTACTGTAGTACACGTAACTCT TGAAAAACGCCGAAGAAATATTGTTGCAAGTTACACTTGTTGTGTCAATA TTGGGATGATGATGTCAAAAGTACAGTTGGAGACTTACCTGGCTCAAGGT AGATATTTTTGCGTGGTGCCATTTTTTGGGGGCGGTTGTCGTGATGAAGC TCTACTGTGTTGCGTATGTTATTAGCCGGAAGTGGTCAGTAAGTTGCTTT CTATAATAAGACGTTTTTTGCATTTTTTTTAGTTCGTTCATTTGCTCCTG ACTCAGGATTACTAACACTTACACCCTTGTAGATGGGCATGTTGTGAAGC TGGCATGTCTGCCGTCATGTTTCATGTTCAGCAACAAAGTACAGCAAAGC TGAGCGACGCTGCAAAGGAGGTCATGATAAAAAAATTCCTCGCATATTTT GATTTTTTTAAAGCGTCTTTTTTGTCGAACCAGTTTGCTGATAGAACCAG TCGACAGTCCCGAAAATTGCGCATTTTAAAAACTTTTTTGTATTTGATAT CTCGTTGTAGAACCCGAGAACCAGCCTTTCGGAGGTGGCAATCATACTGG AGTTTCGTGCGGATACAGCGCCCCAGCTGCTCATTTGTTGAAATTTGACG GGAAAACGGGAAGAAAAACGCTTTTATAACCAAAAGTTCTAACAATTATA AGGCAAATCCCTCCCCAGATCTTTTATTTATACTATGGTAAGCGCAAACG ATAAAGTTTTCGTCGAGGTATTCAAGAGTTCTTCCTCACAGCTGACCCAC CCCACGGTAGTGATTTTTTTCTTCTTGTCCAAATATTCCAGTATCTGAGG ATGCAGCTTTCTGACAATTAGCAATCGAGTGACATTTTTTTTCTTGCGAT CCACCCTTCGTTGCACCCTCAGGTACGACGCCTCAGCCGCTTCCTGTAAA AGTGGTGAGAGCGCCCAACAACAAAACGAACAAGAGAGTGATGGTGGAGT CAAGTTTGGTGATAGCTGGACACAAAATCCATTCCAACACAGCGGCGAAG GGCAACATGTTTTCCCAGATGATGCCGAGCAACAATACGAACATGACGAT GGGGAGTTGGAGAAAAGAGCTCCTGTAGGCGAGCTAAGAATGCCTGTCCA AGCAGGAGGACTAGCTTGGCATGGGCTACGAGAGGTCAGTCCAGCCAACG ATTCAGGAAGGGATAAAGGCTGTGACGCTGCTGGCCGCCCGTCACACCAC AATGCAGCAACTCCGGGTGGGTGGCCTCGAGACTCTAGTACTACCAGAAA GGACCAAAGGCAAGGGACGATGTTATTTACTGCTACCGCCAGTATTTGCA GAATGGAGGCTGACGCCGGTGGTGTTCTCCAAAGAAGGCCGGGTGGGGGA ATGAGCGTGGATGTAGGATCTCTGTCAGACAGCGACAATGACGTTTGAAA TTCAGCGTTGCGTTGTTCTAGAGAAGCTTGCGAACGATTTCTTGGATGAT GTTACAATATTATATGTAATTATGTCTTCGTCACTGTGAGAGGTGCATGC ACTGTTGCTGGCTTTTTGACACGTGGTGAGGCAAGCCCGTATGAATGGCG ACGTAGTTTGATAGAATGTGTATGCCCCCCCCCCCATCCCCATCCCCATC CCCGTGTTTTTTTACTCTTTTTCTGCAGTTGGAC
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Coding sequence (CDS) from alignment at H-paniculata_contig5291:4277..10110-

>mRNA_H-paniculata_contig5291.12677.1 ID=mRNA_H-paniculata_contig5291.12677.1|Name=mRNA_H-paniculata_contig5291.12677.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=5352bp|location=Sequence derived from alignment at H-paniculata_contig5291:4277..10110- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGCGTAGATCAGGTGGAGAACGACCCCCTTTCGCAAACGGGCGCCCTAT
GCACATCCGCAGAGGCAACACCGCCCCTGGCAATGATTACCCTGGAGTTA
ACCAGCCATTGCTCTTTGCAACAGAAAACCTGAACCCGGGGGGAAAAGCG
GGACGAGTCCATGTCAACGGACACGCACAGTCCAGCCCAGCGCACGAGAA
CAGGACTCCACCTGCGCACTCAGGGTGGACAGCAAGAAAGGCTGCTGACT
CTACCGAGGACTTGCTGCAGCCCTCAGGTTCAGGGTTCGAAACGATATTG
CCAACAGGGGAAACGTCAAGCAAAAACAGCGCGAGGAGCGCTGATGGTGG
ATTTGATTCGACCGTACAAACCTTGAGATGCGTAGATCAGGTGGAGAACG
ACCCCCTTTCGCAAACGGGCGCCCTATGCACATCCGCAGAGGCAACACCG
CCCCTGGCAATGATTACCCTGGAGTTAACCAGCCATTGCTCTTTGCAACA
GAAAACCTGAACCCGGGGGGAAAAGCGGGACGAGTCCATGTCAACGGACA
CGCACAGTCCAGCCCAGCGCACGAGAACAGGACTCCACCTGCGCACTCAG
GGTGGACAGCAAGAAAGGCTGCTGACTCTACCGAGGACTTGCTGCAGCCC
TCAGGTTCAGGGTTCGAAACGATATTGCCAACAGGGGAAACGTCAAGCAA
AAACAGCGCGAGGAGCGCTGATGGTGGATTTGATTCGACCGTACAAACCT
TGAGGTGTATGTTCACCAGCCAGAAAACCAAGAAGAGGAAAGTGTGGTCT
GACGGCGCGGTCAAGTGCTGCTCGAAGCGCCAACGAGTGTCTCTGTACCG
GTGGAGCGACGTGCTCGGGGTTACCGACAAGCTTCTGGGCGAGGTTTACC
TCTCCGTGCCAGAGTACAAGGCGTTTGTTAATAACGGGGAGCCAGAACTC
GAAATGGAGCTGTGTATGTTCACCAGCCAGAAAACCAAGAAGAGGAAAGT
GTGGTCTGACGGCGCGGTCAAGTGCTGCTCGAAGCGCCAACGAGTGTCTC
TGTACCGGTGGAGCGACGTGCTCGGGGTTACCGACAAGCTTCTGGGCGAG
GTTTACCTCTCCGTGCCAGAGTACAAGGCGTTTGTTAATAACGGGGAGCC
AGAACTCGAAATGGAGCTATATATCGTCTCATTGGACGGTGTCATTCAGG
AGGCACCGCTTACTGCCGAAGGCTCGATCGGTAGCACCACGGACACAGCT
GGGGCTGGAAGCGCAGCCCATGGTCGAAAACGAAAATTACTGAAACCTTT
TAAACCCCCCTCGAGGACGGCACCTCCCGCGGCGCCGCCTCTAGATTCTT
GGGGAGCCCGGAGGAACGGCAACCGATTGGTGGATGGCGGGAATGTTCCA
AATGGAGAACGAGACTCACAGGGTGAAGCAAGGAATGGGTTGAAGTCCCG
CTCATGCTACACCGGATTCGGTCACGTAGCTTCCTTGTGGGAGGACGACG
ATGATGACGAAATTGCTGAGGGCTCTGCTGGGTTGAGTGCAGCTTCAGGT
GGTAGTGGCAGTGGTTGGGGACTGCACAACGAGGGCAGCGGTCGCGGTCC
TCAAGATAGACATGACCCAGGATATAAGGGGTTGATCAGTGACAACAGTA
GCCGTGGAGGAGGAACTGGCTTCGCAGGCTCAATTCCCGATGGTGCTGCC
CGAATGGTGCAGTTGTCAGCAGCTGCCACGACCATCCCTACTGCATGCAA
CGGGAGGGTAGTGGACACGTGGCGAAGGCACGATGACCTGCGTGCGCCTG
ACAACAGCTACAGCTCGCACGACTCGGCCGAACACTCTGTCCGGCAAAAC
AGTGCTCGCTACAGAGGCGCATCCGACGATGGATGCGCGGAATCTGTCAG
CGATGGACACGTGCACGACAGGCAGAGCATCCAGGGACACGAGCCCTACA
CCGAGCGAAATCCAGGAGAACATAAGCAGGCCACGGGTGGGAGGTACGTA
GATGAGACGGGGATCGACAGGGAAGGAAGAAATGGCAAGAGTCACCGCGG
ACAGAGCTACTACGAGGAAGAGGAAGACGGCGTCGGTGTGGCACAGGCGG
ACCATGGCACTTTACACCAGCATGGTGATTTTTCCGCTCATGCTGTCGGT
TATTCGATGGAGAAGCACCAAGCTATCGAAGGTCGTTCCTCCGAGCACGG
GTCGCACGAGGGGAGGGACGGATGCGAAGAAGGTCACACCCGATCTACGC
AAGACATCCTGTCACTTTTCGGGGGGTTGGGAAACTCTCCCCTTGATGAG
CCCTCTGTGAGTGCACCGGATTCAGCAAGAGATTTGTCGTCAGCGGCGCC
ATCGGAGTCCTCCTTGATGGCTCCGGGTGACCCCAGATCACAAGCACCAG
GTCAAGAACACCCACCGCCTGGGATTGGGAACGAAGCTGTGCTGAGAGGC
AGGGGCACAGCGGCCGATATGAGGCGCGCACAGAGAGCTGCGCGCGAAGC
GCAACAACAAGATCGCATTGTAGCTGTGGTCGATGCTGCTGAAAGCACGC
CCGCGACTACCCACTCGGCAAACAGTGCGCCTGCCGTTGGCCCGTGGGAT
TGTGCTGTTTGCGGGGTGCACGGGACTCCGTCGGCGTTATCGTGCCGAGT
ATGCGGGGCTCAACGGCCGAGGGAGATTGGGAATTGTCGAGGAGTGAGCA
GTGCGGAAGAAGACGGGAATGGCAGTGACTCCAGATATATCGTCTCATTG
GACGGTGTCATTCAGGAGGCACCGCTTACTGCCGAAGGCTCGATCGGTAG
CACCACGGACACAGCTGGGGCTGGAAGCGCAGCCCATGGTCGAAAACGAA
AATTACTGAAACCTTTTAAACCCCCCTCGAGGACGGCACCTCCCGCGGCG
CCGCCTCTAGATTCTTGGGGAGCCCGGAGGAACGGCAACCGATTGGTGGA
TGGCGGGAATGTTCCAAATGGAGAACGAGACTCACAGGGTGAAGCAAGGA
ATGGGTTGAAGTCCCGCTCATGCTACACCGGATTCGGTCACGTAGCTTCC
TTGTGGGAGGACGACGATGATGACGAAATTGCTGAGGGCTCTGCTGGGTT
GAGTGCAGCTTCAGGTGGTAGTGGCAGTGGTTGGGGACTGCACAACGAGG
GCAGCGGTCGCGGTCCTCAAGATAGACATGACCCAGGATATAAGGGGTTG
ATCAGTGACAACAGTAGCCGTGGAGGAGGAACTGGCTTCGCAGGCTCAAT
TCCCGATGGTGCTGCCCGAATGGTGCAGTTGTCAGCAGCTGCCACGACCA
TCCCTACTGCATGCAACGGGAGGGTAGTGGACACGTGGCGAAGGCACGAT
GACCTGCGTGCGCCTGACAACAGCTACAGCTCGCACGACTCGGCCGAACA
CTCTGTCCGGCAAAACAGTGCTCGCTACAGAGGCGCATCCGACGATGGAT
GCGCGGAATCTGTCAGCGATGGACACGTGCACGACAGGCAGAGCATCCAG
GGACACGAGCCCTACACCGAGCGAAATCCAGGAGAACATAAGCAGGCCAC
GGGTGGGAGGTACGTAGATGAGACGGGGATCGACAGGGAAGGAAGAAATG
GCAAGAGTCACCGCGGACAGAGCTACTACGAGGAAGAGGAAGACGGCGTC
GGTGTGGCACAGGCGGACCATGGCACTTTACACCAGCATGGTGATTTTTC
CGCTCATGCTGTCGGTTATTCGATGGAGAAGCACCAAGCTATCGAAGGTC
GTTCCTCCGAGCACGGGTCGCACGAGGGGAGGGACGGATGCGAAGAAGGT
CACACCCGATCTACGCAAGACATCCTGTCACTTTTCGGGGGGTTGGGAAA
CTCTCCCCTTGATGAGCCCTCTGTGAGTGCACCGGATTCAGCAAGAGATT
TGTCGTCAGCGGCGCCATCGGAGTCCTCCTTGATGGCTCCGGGTGACCCC
AGATCACAAGCACCAGGTCAAGAACACCCACCGCCTGGGATTGGGAACGA
AGCTGTGCTGAGAGGCAGGGGCACAGCGGCCGATATGAGGCGCGCACAGA
GAGCTGCGCGCGAAGCGCAACAACAAGATCGCATTGTAGCTGTGGTCGAT
GCTGCTGAAAGCACGCCCGCGACTACCCACTCGGCAAACAGTGCGCCTGC
CGTTGGCCCGTGGGATTGTGCTGTTTGCGGGGTGCACGGGACTCCGTCGG
CGTTATCGTGCCGAGTATGCGGGGCTCAACGGCCGAGGGAGATTGGGAAT
TGTCGAGGAGTGAGCAGTGCGGAAGAAGACGGGAATGGCAGTGACTCCAG
GTACGACGCCTCAGCCGCTTCCTGTAAAAGTGGTGAGAGCGCCCAACAAC
AAAACGAACAAGAGAGTGATGGTGGAGTCAAGTTTGGTGATAGCTGGACA
CAAAATCCATTCCAACACAGCGGCGAAGGGCAACATGTTTTCCCAGATGA
TGCCGAGCAACAATACGAACATGACGATGGGGAGTTGGAGAAAAGAGCTC
CTGTAGGCGAGCTAAGAATGCCTGTCCAAGCAGGAGGACTAGCTTGGCAT
GGGCTACGAGAGGTCAGTCCAGCCAACGATTCAGGAAGGGATAAAGGCTG
TGACGCTGCTGGCCGCCCGTCACACCACAATGCAGCAACTCCGGGTGGGT
GGCCTCGAGACTCTAGTACTACCAGAAAGGACCAAAGGCAAGGGACGATG
TTATTTACTGCTACCGCCAGTATTTGCAGAATGGAGGCTGACGCCGGTGG
TGTTCTCCAAAGAAGGCCGGGTGGGGGAATGAGCGTGGATGTAGGATCTC
TGTCAGACAGCGACAATGACGTTTGAGTACGACGCCTCAGCCGCTTCCTG
TAAAAGTGGTGAGAGCGCCCAACAACAAAACGAACAAGAGAGTGATGGTG
GAGTCAAGTTTGGTGATAGCTGGACACAAAATCCATTCCAACACAGCGGC
GAAGGGCAACATGTTTTCCCAGATGATGCCGAGCAACAATACGAACATGA
CGATGGGGAGTTGGAGAAAAGAGCTCCTGTAGGCGAGCTAAGAATGCCTG
TCCAAGCAGGAGGACTAGCTTGGCATGGGCTACGAGAGGTCAGTCCAGCC
AACGATTCAGGAAGGGATAAAGGCTGTGACGCTGCTGGCCGCCCGTCACA
CCACAATGCAGCAACTCCGGGTGGGTGGCCTCGAGACTCTAGTACTACCA
GAAAGGACCAAAGGCAAGGGACGATGTTATTTACTGCTACCGCCAGTATT
TGCAGAATGGAGGCTGACGCCGGTGGTGTTCTCCAAAGAAGGCCGGGTGG
GGGAATGAGCGTGGATGTAGGATCTCTGTCAGACAGCGACAATGACGTTT
GA
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