prot_H-paniculata_contig5290.12676.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-paniculata_contig5290.12676.1
Unique Name	prot_H-paniculata_contig5290.12676.1
Type	polypeptide
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length	310

Homology

[Close]

BLAST of mRNA_H-paniculata_contig5290.12676.1 vs. uniprot
Match: D8LRM2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRM2_ECTSI)

HSP 1 Score: 208 bits (529), Expect = 1.550e-57
Identity = 142/287 (49.48%), Postives = 182/287 (63.41%), Query Frame = 0

Query:   13 RDLNDLLQHLSADLEDARTVAETDAKRAEASTAAAGQKGEKVRRLGDALATMEARLAASDRERQVAKEAFAKISNEVQTRLQETERQRGELVLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKTEAELSAKVVAEGREKKALDKLSETKRTTAMQDERIESLRSELSSLRRTLEQTVDTAKSSDRESAQRLVQLSQVNAKLSTEGAGARARLVDAEDIAEKRAHELEVMAKSLMKSEEDGRHAAEAVQRLEEELEVSEARWQAAEGQLAAADRREKRY 299
            R+LN LLQ LS DLE+A+   E+  KRAEA     G K   V+R+ +ALA  EARLAAS R++++ KEA +K S E   +  E +RQRGEL LL                                     + +   SA + AE   KK LD+L E +R T MQDERIE+LRSEL++LRRTLEQT + AK+ DRESAQRLVQLSQ NAKLS+E   ARAR++DAE+  EK   + +  AK+  K E+DGR AA++VQRLEEELE++ ARW+AA+GQL AA+RREK +
Sbjct:  296 RELNALLQSLSTDLEEAKAAGESSGKRAEALAHEVGVKEGDVQRVREALAATEARLAASGRDKELLKEALSKSSAEAHAKTAEFDRQRGELDLLEREKHDLVLDVQERVRVHKEATADAERYRERLEQAENRLKEGESATLAAELSRKKTLDELGEARRGTVMQDERIEALRSELTTLRRTLEQTTEAAKARDRESAQRLVQLSQANAKLSSESTSARARVIDAEEAVEKAGQDAQEAAKAQAKLEDDGRRAADSVQRLEEELEIANARWKAAQGQLVAANRREKEF 582

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig5290.12676.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig5290.12676.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
D8LRM2_ECTSI	1.550e-57	49.48	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 61..81
None	No IPR available	COILS	Coil	Coil	coord: 12..32
None	No IPR available	COILS	Coil	Coil	coord: 124..144
None	No IPR available	COILS	Coil	Coil	coord: 180..200
None	No IPR available	COILS	Coil	Coil	coord: 254..288

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig5290	contig	H-paniculata_contig5290:9557..14195 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig5290.12676.1	mRNA_H-paniculata_contig5290.12676.1	Halopteris paniculata Hal_grac_a_UBK monoicous	mRNA	H-paniculata_contig5290 9475..14195 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-paniculata_contig5290.12676.1 ID=prot_H-paniculata_contig5290.12676.1|Name=mRNA_H-paniculata_contig5290.12676.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=310bp
MANENDYRQSLRRDLNDLLQHLSADLEDARTVAETDAKRAEASTAAAGQK
GEKVRRLGDALATMEARLAASDRERQVAKEAFAKISNEVQTRLQETERQR
GELVLLEREKHDLILDVQERVRALKELTTDVERYRQLVTEAKRKTEAELS
AKVVAEGREKKALDKLSETKRTTAMQDERIESLRSELSSLRRTLEQTVDT
AKSSDRESAQRLVQLSQVNAKLSTEGAGARARLVDAEDIAEKRAHELEVM
AKSLMKSEEDGRHAAEAVQRLEEELEVSEARWQAAEGQLAAADRREKRYN
VNGHKQRRG*