prot_H-paniculata_contig52899.12672.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-paniculata_contig52899.12672.1
Unique Name	prot_H-paniculata_contig52899.12672.1
Type	polypeptide
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length	107

Homology

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BLAST of mRNA_H-paniculata_contig52899.12672.1 vs. uniprot
Match: D8LN35_ECTSI (FAD dependent oxidoreductase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN35_ECTSI)

HSP 1 Score: 95.9 bits (237), Expect = 1.710e-22
Identity = 56/117 (47.86%), Postives = 64/117 (54.70%), Query Frame = 0

Query:    6 RYWSAVEEAKLVPDYSGIRPKLAGPQAAN-------------------SSGGQPDEAQGDKRDGALPSSTKKSGPADFLIQGPSAHGVSGLVNLFGIESPGLTASLAIAEHVANVVE 103
            RYW  VEE+KLVPDYSGIRPKL GP   +                         DE          P ++   G ADF+IQG   HGV GLVNL GIESPGLTASLAIA+HV  ++E
Sbjct:   75 RYWPGVEESKLVPDYSGIRPKLVGPDGPSVVAHXXXXXXXXXXXXXXXXXXXXXDEEHRQYPPVPRPGASHFRGAADFVIQGRDEHGVDGLVNLMGIESPGLTASLAIADHVVGMLE 191

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BLAST of mRNA_H-paniculata_contig52899.12672.1 vs. uniprot
Match: A0A839VMH1_9BURK (L-2-hydroxyglutarate oxidase LhgO n=1 Tax=Herbaspirillum sp. Sphag64 TaxID=2587029 RepID=A0A839VMH1_9BURK)

HSP 1 Score: 90.1 bits (222), Expect = 2.810e-21
Identity = 49/93 (52.69%), Postives = 58/93 (62.37%), Query Frame = 0

Query:    6 RYWSAVEEAKLVPDYSGIRPKLAGPQAANSSGGQPDEAQGDKRDGALPSSTKKSGPADFLIQGPSAHGVSGLVNLFGIESPGLTASLAIAEHV 98
            +YW A+ +  L P Y+GIRPKL+GP       G+P                    PADF+IQGPS HGV GLVNLFGIESPGLT+SLAIAE+V
Sbjct:   35 QYWPALPDGALQPGYAGIRPKLSGP-------GEP--------------------PADFMIQGPSEHGVPGLVNLFGIESPGLTSSLAIAENV 100

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BLAST of mRNA_H-paniculata_contig52899.12672.1 vs. uniprot
Match: UPI001BCD6F75 (NAD(P)/FAD-dependent oxidoreductase n=1 Tax=Pseudomonas lalucatii TaxID=1424203 RepID=UPI001BCD6F75)

HSP 1 Score: 95.1 bits (235), Expect = 5.340e-21
Identity = 52/97 (53.61%), Postives = 62/97 (63.92%), Query Frame = 0

Query:    6 RYWSAVEEAKLVPDYSGIRPKLAGPQAANSSGGQPDEAQGDKRDGALPSSTKKSGPADFLIQGPSAHGVSGLVNLFGIESPGLTASLAIAEHVANVV 102
            RY+  ++ ++L P YSGIRPKLAGP       G+P                    PADFLIQGP AHG++GLVNLFGIESPGLTASLAIAE VA ++
Sbjct:  299 RYFPGLDSSRLTPGYSGIRPKLAGP-------GEP--------------------PADFLIQGPGAHGLAGLVNLFGIESPGLTASLAIAERVAQML 368

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BLAST of mRNA_H-paniculata_contig52899.12672.1 vs. uniprot
Match: A0A530B3Y3_9HYPH (FAD-dependent oxidoreductase (Fragment) n=1 Tax=Mesorhizobium sp. TaxID=1871066 RepID=A0A530B3Y3_9HYPH)

HSP 1 Score: 86.7 bits (213), Expect = 2.800e-20
Identity = 49/101 (48.51%), Postives = 56/101 (55.45%), Query Frame = 0

Query:    6 RYWSAVEEAKLVPDYSGIRPKLAGPQAANSSGGQPDEAQGDKRDGALPSSTKKSGPADFLIQGPSAHGVSGLVNLFGIESPGLTASLAIAEHVANVVETTT 106
            +YW  + +  L   YSGIRPKL+GP  ANS                           DF+IQ  + HGV GLVNLFGIESPGLTASLAIAEHV  +V  TT
Sbjct:    2 KYWPDLPDGSLQAGYSGIRPKLSGPGDANS---------------------------DFVIQDAATHGVDGLVNLFGIESPGLTASLAIAEHVMGIVAPTT 75

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BLAST of mRNA_H-paniculata_contig52899.12672.1 vs. uniprot
Match: A0A530AAW9_9HYPH (FAD-dependent oxidoreductase (Fragment) n=1 Tax=Mesorhizobium sp. TaxID=1871066 RepID=A0A530AAW9_9HYPH)

HSP 1 Score: 86.7 bits (213), Expect = 4.210e-20
Identity = 45/97 (46.39%), Postives = 57/97 (58.76%), Query Frame = 0

Query:    6 RYWSAVEEAKLVPDYSGIRPKLAGPQAANSSGGQPDEAQGDKRDGALPSSTKKSGPADFLIQGPSAHGVSGLVNLFGIESPGLTASLAIAEHVANVV 102
            +YW  + +  L P YSGIRPKL+GP  A+S                           DF+IQ  +AHG+ GLVNLFGIESPGLT+SLA+AEHVA ++
Sbjct:    7 KYWPELADGSLQPAYSGIRPKLSGPGEASS---------------------------DFVIQDAAAHGIQGLVNLFGIESPGLTSSLAVAEHVARIL 76

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BLAST of mRNA_H-paniculata_contig52899.12672.1 vs. uniprot
Match: A0A528XT57_9HYPH (FAD-dependent oxidoreductase (Fragment) n=1 Tax=Mesorhizobium sp. TaxID=1871066 RepID=A0A528XT57_9HYPH)

HSP 1 Score: 86.7 bits (213), Expect = 4.690e-20
Identity = 46/97 (47.42%), Postives = 55/97 (56.70%), Query Frame = 0

Query:    6 RYWSAVEEAKLVPDYSGIRPKLAGPQAANSSGGQPDEAQGDKRDGALPSSTKKSGPADFLIQGPSAHGVSGLVNLFGIESPGLTASLAIAEHVANVV 102
            +YW  + +  L P YSGIRPKL+GP  AN                            DF+IQ  +AHGV GLVNLFGIESPGLT+SLAIAEHV  ++
Sbjct:   22 KYWPELADGSLQPAYSGIRPKLSGPGEAN---------------------------GDFVIQDATAHGVEGLVNLFGIESPGLTSSLAIAEHVTRIL 91

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BLAST of mRNA_H-paniculata_contig52899.12672.1 vs. uniprot
Match: UPI001BD27B79 (NAD(P)/FAD-dependent oxidoreductase n=2 Tax=unclassified Variovorax TaxID=663243 RepID=UPI001BD27B79)

HSP 1 Score: 92.0 bits (227), Expect = 7.310e-20
Identity = 48/97 (49.48%), Postives = 61/97 (62.89%), Query Frame = 0

Query:    6 RYWSAVEEAKLVPDYSGIRPKLAGPQAANSSGGQPDEAQGDKRDGALPSSTKKSGPADFLIQGPSAHGVSGLVNLFGIESPGLTASLAIAEHVANVV 102
            RYW  + +  L+P Y+G+RPK++GP       GQP                     ADF+IQGP+ HGV+GLVNLFGIESPGLT+SLAIA HVAN++
Sbjct:  295 RYWPELPDGALLPGYAGMRPKISGP-------GQP--------------------AADFMIQGPAEHGVAGLVNLFGIESPGLTSSLAIARHVANLL 364

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BLAST of mRNA_H-paniculata_contig52899.12672.1 vs. uniprot
Match: A0A1I1LH04_9RHOB (L-2-hydroxyglutarate oxidase LhgO n=1 Tax=Tropicimonas isoalkanivorans TaxID=441112 RepID=A0A1I1LH04_9RHOB)

HSP 1 Score: 92.0 bits (227), Expect = 7.660e-20
Identity = 51/97 (52.58%), Postives = 57/97 (58.76%), Query Frame = 0

Query:    6 RYWSAVEEAKLVPDYSGIRPKLAGPQAANSSGGQPDEAQGDKRDGALPSSTKKSGPADFLIQGPSAHGVSGLVNLFGIESPGLTASLAIAEHVANVV 102
            RYW A+ +  L PDYSGIRPKL+ P A                             ADF I+  S HGVSGLVNLFGIESPGLTASLAIAEHVA+V+
Sbjct:  301 RYWPALPDGALYPDYSGIRPKLSTPGAT---------------------------AADFTIETASTHGVSGLVNLFGIESPGLTASLAIAEHVADVI 370

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BLAST of mRNA_H-paniculata_contig52899.12672.1 vs. uniprot
Match: A0A1Q3J1T7_9PROT (FAD-dependent oxidoreductase n=1 Tax=Alphaproteobacteria bacterium 65-7 TaxID=1895712 RepID=A0A1Q3J1T7_9PROT)

HSP 1 Score: 91.7 bits (226), Expect = 1.010e-19
Identity = 48/97 (49.48%), Postives = 58/97 (59.79%), Query Frame = 0

Query:    6 RYWSAVEEAKLVPDYSGIRPKLAGPQAANSSGGQPDEAQGDKRDGALPSSTKKSGPADFLIQGPSAHGVSGLVNLFGIESPGLTASLAIAEHVANVV 102
            R+W  +   +L PDYSG+RPKL+GP AAN                           ADF I GP+AHG+ GLVNLFGIESPGLTASLAIAE+V  ++
Sbjct:  295 RWWPGLRAERLTPDYSGVRPKLSGPGAAN---------------------------ADFRIDGPAAHGLPGLVNLFGIESPGLTASLAIAEYVEEML 364

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BLAST of mRNA_H-paniculata_contig52899.12672.1 vs. uniprot
Match: A0A537XDJ1_9PROT (FAD-dependent oxidoreductase (Fragment) n=2 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537XDJ1_9PROT)

HSP 1 Score: 86.3 bits (212), Expect = 1.060e-19
Identity = 44/96 (45.83%), Postives = 55/96 (57.29%), Query Frame = 0

Query:    6 RYWSAVEEAKLVPDYSGIRPKLAGPQAANSSGGQPDEAQGDKRDGALPSSTKKSGPADFLIQGPSAHGVSGLVNLFGIESPGLTASLAIAEHVANV 101
            RYW  + +  L+P YSGIRPK+  P  A                             DFLIQGP+ HGV+GL+NLFGIESPGLT+SLAIA+HV ++
Sbjct:   41 RYWPTLPDGALMPSYSGIRPKIVPPAVATQ---------------------------DFLIQGPADHGVAGLINLFGIESPGLTSSLAIADHVGDL 109

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig52899.12672.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig52899.12672.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D8LN35_ECTSI	1.710e-22	47.86	FAD dependent oxidoreductase n=1 Tax=Ectocarpus si...	[more]
A0A839VMH1_9BURK	2.810e-21	52.69	L-2-hydroxyglutarate oxidase LhgO n=1 Tax=Herbaspi...	[more]
UPI001BCD6F75	5.340e-21	53.61	NAD(P)/FAD-dependent oxidoreductase n=1 Tax=Pseudo...	[more]
A0A530B3Y3_9HYPH	2.800e-20	48.51	FAD-dependent oxidoreductase (Fragment) n=1 Tax=Me...	[more]
A0A530AAW9_9HYPH	4.210e-20	46.39	FAD-dependent oxidoreductase (Fragment) n=1 Tax=Me...	[more]
A0A528XT57_9HYPH	4.690e-20	47.42	FAD-dependent oxidoreductase (Fragment) n=1 Tax=Me...	[more]
UPI001BD27B79	7.310e-20	49.48	NAD(P)/FAD-dependent oxidoreductase n=2 Tax=unclas...	[more]
A0A1I1LH04_9RHOB	7.660e-20	52.58	L-2-hydroxyglutarate oxidase LhgO n=1 Tax=Tropicim...	[more]
A0A1Q3J1T7_9PROT	1.010e-19	49.48	FAD-dependent oxidoreductase n=1 Tax=Alphaproteoba...	[more]
A0A537XDJ1_9PROT	1.060e-19	45.83	FAD-dependent oxidoreductase (Fragment) n=2 Tax=Al...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.30.9.10		coord: 6..30 e-value: 1.1E-17 score: 66.0
None	No IPR available	PANTHER	PTHR43104	FAMILY NOT NAMED	coord: 60..102
None	No IPR available	PANTHER	PTHR43104:SF3		coord: 5..33 coord: 60..102
None	No IPR available	PANTHER	PTHR43104	FAMILY NOT NAMED	coord: 5..33
IPR036188	FAD/NAD(P)-binding domain superfamily	GENE3D	3.50.50.60		coord: 31..96 e-value: 1.1E-17 score: 66.0

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig52899	contig	H-paniculata_contig52899:405..725 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig52899.12672.1	mRNA_H-paniculata_contig52899.12672.1	Halopteris paniculata Hal_grac_a_UBK monoicous	mRNA	H-paniculata_contig52899 405..725 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-paniculata_contig52899.12672.1 ID=prot_H-paniculata_contig52899.12672.1|Name=mRNA_H-paniculata_contig52899.12672.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=107bp
MCCNDRYWSAVEEAKLVPDYSGIRPKLAGPQAANSSGGQPDEAQGDKRDG
ALPSSTKKSGPADFLIQGPSAHGVSGLVNLFGIESPGLTASLAIAEHVAN
VVETTT*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR036188	FAD/NAD-bd_sf