mRNA_H-paniculata_contig5288.12669.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig5288.12669.1 vs. uniprot
Match: D7FZM1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZM1_ECTSI) HSP 1 Score: 435 bits (1118), Expect = 3.630e-133 Identity = 201/271 (74.17%), Postives = 228/271 (84.13%), Query Frame = 2
Query: 1421 PYAPSMCSNGIAGVDNGQGVCCKENCGFCGGTGCGAVQGTNGASDCCPDTIIENSGGAYCGQAPCVMEGYTPSPANPAFSGTASPVAPSTCSNGMPGYQDGEVCCVEACGQCGGDGCGTIPGTGGAANCCSSKVRESGVICGQPPCIIDGYTPAPAVVGGGTAAPVGSSTCSNGMAGFQDGPVCCAANCGQCGGMGCGSIIGTGGQSTCCSSIIEVEGQPCSVTGSSPCIIDDYTPAPVVPDYGSAAPVVPSICSNGLPGYQDLDVCCLEA 2233
P APS CSNGI GV +G VCC E CG CGG GCGA+ GTNGASDCCPDTI E SGG +CG+APCVM G+TPSP NPAF GTA+PVAPSTCSNG+ GYQDG +CC+E CG+CGGDGCGTIPGTGG+ NCC S + +GV+CG+ PCII+GYTPAPAVVGGGT AP G+STCSNG+ G+QDGP CCAANCGQCGG GCGS+ GT G S CCSS +E+ G CS TG SPC+ID+YTPAPVVPDYGSAAPVVPS CSNGLPGYQ+ D+CCLE+
Sbjct: 286 PVAPSTCSNGIPGVSDGD-VCCLEACGQCGGEGCGAIAGTNGASDCCPDTIKEESGGVFCGEAPCVMAGFTPSPLNPAFDGTAAPVAPSTCSNGIAGYQDGAICCLEICGRCGGDGCGTIPGTGGSDNCCPSTILAAGVVCGEAPCIIEGYTPAPAVVGGGTTAPYGTSTCSNGILGYQDGPACCAANCGQCGGGGCGSVPGTAGASACCSSDVELAGNLCSATGVSPCVIDNYTPAPVVPDYGSAAPVVPSNCSNGLPGYQNNDICCLES 555
BLAST of mRNA_H-paniculata_contig5288.12669.1 vs. uniprot
Match: A0A6H5JG29_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG29_9PHAE) HSP 1 Score: 308 bits (789), Expect = 4.350e-81 Identity = 197/608 (32.40%), Postives = 255/608 (41.94%), Query Frame = 2
Query: 1691 CSNGMPGYQDGEVCCVEACGQCGGDGCGTIPGTGGAANCCSSKVRESGVICG---QPPCIIDGYTPAPAVVGGGTAAPVGSSTCSNGMAGFQDGPVCCAANCGQCGGMGCGSIIGTGGQSTCCSSIIEVEGQPCSVTGSSPCIIDDYTPAPVVPDYGSAAPVVP----------------------------------------------SICSNGLPGYQDLDVCCLEACGQCGGEGCGTIPGTGGNEFCCSSIIRESGQTCGEGVVAPCIIGDFTPSPVNPAFLGTAAPVQ-------------------------QTTCTNGLPGVQNGAACCALNCGQCGGPGCGTIPGTGGRSNCCASAVLDANQPCIVNGKQAPCVIEGYTPAPATLDGTLAPYV---------------------------------QSMCSNGMAGVQNGAACCSENCGTCGGIGCGTLPGTGGSDHCCASSVLQNNEICGLNGKQAPCVIEGYTPAPAGLPGTVAPFAPSS--------------------------CPNGLAGVQDGAACCDMKCGQCGGLGCGTLPGTGGSDYCCSSAIIANGTACSVAGSAPCFMD 3115
CSNG+PG Q G CC+ CG CGG GC + G G NCC S++ + G +C PC++D CSNG+ G Q G CC A CG CGG GC + G G+ CC S IE G+ CSV ++PC++D PAP SA CSNG+PG Q + CCL CG CGG GC + G G + CC S I + G+ C + APC++ P+P +P + TA C+NG+PG+Q+G ACC CG CGG GC + G G NCC S + D + C V APCV++G PAP+ + A +CSNG+ G+Q G ACC CGTCGG GC G G D CC S + ++C + APCV++G PAP+ + A C NG+ G+Q G+ACC +CG CGG GC L G G+D CC S I G CS +APC +D
Sbjct: 1576 CSNGIPGIQSGNACCLAECGGCGGSGCAQLGGGLGEDNCCQSEIEDFGELCSVKMAAPCVVD-------------------DMCSNGIPGIQSGNACCLAECGGCGGSGCAQLGGGLGEDNCCQSEIEDFGELCSVKMAAPCVVDGSAPAPSPVAMPSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDTCSNGIPGIQSGNACCLAECGGCGGSGCAQLGGGLGEDNCCQSEIEDFGELCSVKMAAPCVVDGSAPAP-SPVAMPTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDMCSNGIPGIQSGNACCLAECGGCGGSGCAQLGGGLGEDNCCQSEIEDFGELCSVK-MAAPCVVDGSAPAPSPVAMPTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNDLCSNGIPGIQTGNACCLAECGTCGGRGCAEYGGGLGEDSCCQSEIEDFGQLCSVT-MAAPCVVDGSAPAPSPMAMPTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTDVCSNGIPGIQTGSACCLAECGGCGGTGCAQLGGGLGADNCCQSEIEDFGALCSATMTAPCIVD 2161
BLAST of mRNA_H-paniculata_contig5288.12669.1 vs. uniprot
Match: D7FJ68_ECTSI (WSC domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJ68_ECTSI) HSP 1 Score: 293 bits (750), Expect = 3.080e-76 Identity = 219/691 (31.69%), Postives = 290/691 (41.97%), Query Frame = 2
Query: 1436 MCSNGIAGVDNGQGVCCKENCGFCGGTGCGAVQGTNGASDCCPDTIIENSGGAYCG---QAPCVMEGYTPSPANPAFSGTASPVAPST--------------------------------------------------------------------CSNGMPGYQDGEVCCVEACGQCGGDGCGTIPGTGGAANCCSSKVRESGVICG---QPPCIIDGYTPAPAVVGGGTAAPVGSSTCSNGMAGFQDGPVCCAANCGQCGGMGCGSIIGTGGQSTCCSSIIEVEGQPCSVTGSSPCIIDDYTPAPVVPDYGSAAPVVPSICSNGLPGYQDLDVCCLEACGQCGGEGCGTIPGTGGNEFCCSSIIRESGQTCGEGVVAPCIIGDFTPSPVNPAFLGTAAPVQQTTCTNGLPGVQNGAACCALNCGQCGGPGCGTIPGTGGRSNCCASAVLDANQPCIVNGKQAPCVIEGYT-PAPATLDGTLAPYVQ--------------SMCSN--GMAGVQN--GAACCSENCGTCGGIGCGTLPGTGGSDHCCASSVLQNNEICGLNGKQAPCVIE--GYTPAPAGLP----------GTVAPFAPSS---CPNGLAGVQD--GAACCDMKCGQCGGLGCGTLPGTGGSDYCCSSAIIANGTACSVAGSAPCFMD---DWSETPSPTILETVAPFE 3169
+CSNGI G+ +G CC CG CGG+GC + G G +CC I + G C APCV++G P+P SPVA T CSNG+PG Q G CC+ CG CGG GC G G NCC S++ + G +C + PC++D CSNG+ G Q G CC A CG CGG GC G G+ CC S IE G+ CSVT +PC++DD +CSNG+PG Q + CCL CG CGG GC + G G + CC S I + G+ C + APC++ D C+NG+PG+Q G ACC CG CGG GC + G G NCC S + D + C APC+++ + PAP+ + A S C N G+ GV++ +ACC +C +CGG+GC + G CC S+++ + C ++G APC I G PAP P T P AP++ C NG+ G++ G CC C C G C L G +CC I G C + APC +D T +PT T PF+
Sbjct: 2548 VCSNGIPGIQSGN-ACCLAECGACGGSGCAELGGGLGEHNCCQSEIEDF--GELCSLSLAAPCVVDGSAPAP---------SPVAMPTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTDVCSNGIPGIQTGNACCLAECGTCGGRGCAEYGGGLGEDNCCQSEIEDFGELCSVTMEAPCVVD-------------------DVCSNGIPGIQTGNACCLAECGTCGGRGCAEYGGGLGEDNCCQSEIEDFGELCSVTMEAPCVVDD-------------------VCSNGIPGIQTGNACCLAECGGCGGTGCAQLGGGLGADNCCMSEIEDFGELCSVTMEAPCVVDDV--------------------CSNGIPGIQTGNACCLAECGGCGGTGCAQLGGGLGADNCCMSEIEDFGELCSAT-MTAPCIVDSVSGPAPSPVAMPTAXXXXXXXXXXXXXXXXXXSTCPNAGGIPGVESPGSSACCPTSCVSCGGVGCSSR---GEVTDCCVSAIMTKGQACEVSGT-APCYIGDGGEAPAPTPEPVRPTPVTMEPTTEPPAAPTTQGLCSNGVPGIESASGDYCCPATCRACDGDNC-YLDGL----FCCGDDIEETGVLCDDSEEAPCIIDIDGGGFGTYAPTGAPTGTPFD 3158
BLAST of mRNA_H-paniculata_contig5288.12669.1 vs. uniprot
Match: A0A6H5JSA0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSA0_9PHAE) HSP 1 Score: 222 bits (566), Expect = 5.170e-63 Identity = 100/138 (72.46%), Postives = 116/138 (84.06%), Query Frame = 2
Query: 1427 APSMCSNGIAGVDNGQGVCCKENCGFCGGTGCGAVQGTNGASDCCPDTIIENSGGAYCGQAPCVMEGYTPSPANPAFSGTASPVAPSTCSNGMPGYQDGEVCCVEACGQCGGDGCGTIPGTGGAANCCSSKVRESGVI 1840
+PS CSNGI GV +G+ VCC E CG CGG GCGA+ GTNGASDCCPDTI E SGG +CG+APCVMEG+TPSP NPA GTA+PVAPSTCSNG+PGYQDG +CC+E CG+CGGDGCGTIPGTGG+ NCC S + +GV+
Sbjct: 2 SPSTCSNGIPGVSDGE-VCCLEACGQCGGVGCGAIAGTNGASDCCPDTIKEESGGVFCGEAPCVMEGFTPSPLNPALDGTAAPVAPSTCSNGIPGYQDGVICCLEICGRCGGDGCGTIPGTGGSDNCCPSDILAAGVV 138
BLAST of mRNA_H-paniculata_contig5288.12669.1 vs. uniprot
Match: A0A6H5K7R2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7R2_9PHAE) HSP 1 Score: 195 bits (496), Expect = 1.540e-49 Identity = 140/378 (37.04%), Postives = 188/378 (49.74%), Query Frame = 2
Query: 2396 FLGTAAPVQQTTCTNGLPGVQNGA--ACCALNCGQCGGPGCGTIPGTGG--RSNCCASAVLDANQPCIVNGKQAPCVIEGYTPAPATLDGTLAPYVQSMCSNGMAGVQNGAA--CCSENCG-TCGGIGCGTLPGTGGSDHCCASSVLQNNEICGLNGKQAPCVIEGYTPAPAGLPGTVAPFAPSSCPNGLAGVQD--GAACCDMKCGQCGGLGCGTLPGTGGSDYCCSSAIIANGTACSVAGSAPCFMDDWSETPSPTILETVAPFEPSTCSNGMAGYQDGSVCCLEAC-GLCGGVGCGTVIGTRGQADCCPSSILQANQICGQGIVAPCVIPS---TPAPTRAPAIXXXXXXVPFISGNARDFAPGANAAHRPQVGG 3490
+GT P C+NGL G+Q+ + CC C CGG C T T ++CCA+ ++++ C V+ APC+I T A A D S+C NG GV + CC CG +CGG GCG++PG + CC+S ++++ +C + APCV+ G ++C NG+ G++D CCD CG CGG GCG + G G D CCS I CSV APC MD F STC NG+AG QDGSVCC E C G+CGG GCG+++GT G DCC ++IL C +G++APC++ + T AP AP P + APGA AA V G
Sbjct: 19 LVGTMTPAG-AVCSNGLEGIQSTSLDVCCVEGCEVCGGVDC-TPANTSSLTSADCCATEIVESGTFCDVS-MAAPCII---TTAAAAND--------SVCENGQTGVPDPDTDVCCPLECGDSCGGEGCGSIPGVNATQ-CCSSLIIESGAVCS-DTVSAPCVV-----------GAAEADNSTTCSNGIVGIEDPVNLICCDAACGLCGGPGCGNVTGLTGLD-CCSEEIAVVNDLCSVTNEAPCVMDP-------------PDFVASTCPNGLAGVQDGSVCCAEECNGVCGGEGCGSIVGTNGAEDCCSNTILATGVDCEEGVMAPCIMLNGTYTDAPMAAPTF-------PPAAAPGTTVAPGAVAATEAPVAG 348
BLAST of mRNA_H-paniculata_contig5288.12669.1 vs. uniprot
Match: D8LG71_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LG71_ECTSI) HSP 1 Score: 172 bits (436), Expect = 2.710e-42 Identity = 133/364 (36.54%), Postives = 168/364 (46.15%), Query Frame = 2
Query: 2399 LGTAAPVQQTTCTNGLPGVQNGA--ACCALNCGQCGGPGCGTIPGTGGRSN-CCASAVLDANQPCIVNGKQAPCVIEGYTPAPATLDGTLAPYVQSMCSNGMAGVQNGAA--CCSENCG-TCGGIGCGTLPGTGGSDHCCASSVLQNNEICGLNGKQAPCVIEGYTPAPAGLPGTVAPFAPSSCPNGLAGVQ--DGAACCDMKCGQCGGLGCGTLPGTGGSDYCCSSAIIANGTACSVAGSAPCFMDDWSETPSPTILETVAPFEPSTCSNGMAGYQDGSVCCLEAC-GLCGGVGCGTVIGTRGQADCCPSSILQANQICGQGIVAPCVIPS---TPAPTRAPAIXXXXXXVPFISGNARDFAP 3454
L A V TC G+ GV++ + CC L CG CGG GC + +N CCA+ + ++ C G APC++ T A S+C NG GVQ+ CC CG +CGG GCGT+PG S CCAS + Q+ +CG +G +APC A S C NG G++ D CCD C CGG CG + G G+D CC+ IIAN CS GSAPC +D P + STC+NG+AG GSVCC E C G+ T G DCC ++IL AN C APCV+ TPAP P + P G AP
Sbjct: 14 LALAGSVGAQTCAGGISGVESTSLDVCCTLECGTCGGVGCTPANTSSLTANDCCATEISESGVMCSDTGV-APCILS-----------TEAASADSVCDNGQTGVQDPDTDVCCPLECGESCGGEGCGTIPGVDASQ-CCASIIEQSGIVCG-DGIEAPCTQVAVA------------VADSVCSNGFPGIENEDATVCCDPACVVCGGSTCGNVAGLTGAD-CCTGTIIANDELCSEKGSAPCVVDP------PEVTA-------STCANGLAGVSSGSVCCAEVCNGVXXXXXXXXXXXTNGAEDCCSATILAANIACVD--TAPCVMVEGTFTPAPAVVPTVAATTT-APLAPGETVTMAP 334
BLAST of mRNA_H-paniculata_contig5288.12669.1 vs. uniprot
Match: D7FWE8_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FWE8_ECTSI) HSP 1 Score: 159 bits (401), Expect = 9.570e-36 Identity = 133/402 (33.08%), Postives = 173/402 (43.03%), Query Frame = 2
Query: 1709 GYQDGEVCCVEACGQCGGDGCGTIPGTGGAANCCSSKVRESGVICGQPPCIID-GYTPAPAVVGGGTAAPVGSSTCSNGMAGFQDGPVCCAANCGQCGGMGCGSIIGTGGQSTCCSSIIEVEGQPCSVTGSSPCIID-DYTPAPVVPDYGSAAPVVPSICSNGLPGYQDLDVCCLEACGQCGGEGCGTIPGTGGNEFCCSSIIRESGQTCGEGVVAPCII-GDFTPSPVNPAFLGTAAPVQQT-TCTNGLPGVQNGAACCALNCGQCGGPGCGTIPGTGGRSNCCASAVLDANQPCIVNGKQAPCVIEGYTPAPATLDGTLAPYVQSMCSNGMAGVQNGAACCSENCGTCGGIGCGTLP-GTGGSDHCCASSVLQNNEICGLNGKQAPCVIEGYTPAPAGLP 2899
G G CC C +CGG GC A+CC+S + +G CG PC+++ G +P PA GG C G G VCC+A CG CGG GCGS G CC+S I PC GS+PC++D D +P + C L G D CC C +CGG GC G CC+S I C APCI+ GD +P+ + TC GV G CC+ C +CGG GC G ++CC S D + C V G APC+++G T +P C GV G CCS CG CGG G G+D CC S + + +C + G APC+++G + P P
Sbjct: 23 GILKGIYCCSAGCEECGGSGCSDRGDGLTGADCCTSDILAAGKACGSAPCLLEEGSSPTPASSGG----------CD----GILQGDVCCSAECGTCGGSGCGSRAGLTANE-CCTSTIAAANVPC---GSAPCVVDGDTSPTXXXXXXXXSGSFT---CDGVLKG----DYCCSAGCVECGGSGCSDRGGGLTGADCCTSDISN---LCSVTGAAPCIVDGDTSPTXXXXXXXXXXXXXSGSFTCD----GVLKGDYCCSAGCVECGGSGCSDRGGGLTGADCCTS---DISNLCSVTGA-APCIVDGDT-SPTXXXXXXXXSGSFTCD----GVLKGDYCCSAGCGECGGXXXXXXXXGLTGAD-CCTSDI---SNLCSVTGA-APCIVDGDSTGPTPTP 378
BLAST of mRNA_H-paniculata_contig5288.12669.1 vs. uniprot
Match: D7FJ69_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJ69_ECTSI) HSP 1 Score: 143 bits (360), Expect = 3.990e-35 Identity = 84/183 (45.90%), Postives = 101/183 (55.19%), Query Frame = 2
Query: 1601 GQAPCVMEGYTPSPANPAFSGTASPVAPST-----CSNGMPGYQDGEVCCVEACGQCGGDGCGTIPGTGGAANCCSSKVRESGVICG---QPPCIIDGYTPAPAVVGGGTAAPVGSST--CSNGMAGFQDGPVCCAANCGQCGGMGCGSIIGTGGQSTCCSSIIEVEGQPCSVTGSSPCIIDD 2119
G APCV+ GY P+P A PVAP T CSNG+PG Q G CC+ CG CGG GC + G G NCC ++ E G +C + PC++D PAP+ V APV T CSNG G Q G CC A CG+CGG GCG G G CC S IE G+ CS+ ++PC IDD
Sbjct: 6 GSAPCVL-GYAPAPTP-----VAEPVAPVTEPTDVCSNGIPGVQSGVSCCLAECGGCGGSGCAELGGGLGEHNCCEGEIEEFGELCSIKLEAPCVVDASAPAPSPVAE-PVAPVTEPTDVCSNGFPGIQSGVSCCLAECGECGGRGCGEFGGGLGADKCCESDIEEYGELCSIALAAPCYIDD 181
BLAST of mRNA_H-paniculata_contig5288.12669.1 vs. uniprot
Match: D7FZM0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZM0_ECTSI) HSP 1 Score: 135 bits (341), Expect = 3.940e-33 Identity = 62/100 (62.00%), Postives = 75/100 (75.00%), Query Frame = 2
Query: 3170 PSTCSNGMAGYQDGSVCCLEACGLCGGVGCGTVIGTRGQADCCPSSILQANQICGQGIVAPCVIPSTPAPTRAPAIXXXXXXVPFISGNARDFAPGANAA 3469
PSTCSNG+ GYQDG CCL CGLCGG GCG+V GT G +DCCPS+I+ + ++CG IVAPC+IP+TPAPT APA+ VPF++GNA DF NAA
Sbjct: 4 PSTCSNGLPGYQDGQACCLMNCGLCGGDGCGSVNGTAGASDCCPSTIINSARVCGGDIVAPCIIPATPAPTPAPALTLMPTPVPFLAGNANDFINDTNAA 103
BLAST of mRNA_H-paniculata_contig5288.12669.1 vs. uniprot
Match: A0A6H5JJ37_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJ37_9PHAE) HSP 1 Score: 150 bits (378), Expect = 1.240e-32 Identity = 130/456 (28.51%), Postives = 173/456 (37.94%), Query Frame = 2
Query: 1931 CSNGMAGFQ--DGPVCCAANCGQCGGMGCGSI-IGTGGQSTCCSSIIEVEGQPCSVTGSSPCIIDDYTPAPVVPDYGSAAPVVP--------------------SICSNGLPGYQDLDVCCLEACGQCGGEGCGTIPGTGGNEFCCSSIIRESGQTCGEGVVAPCIIGDFTPSPVNPAFLGTAAPVQQTTCTNGLPGVQNGAACCALNCGQCGGPGCGTIPGTGGRSNCCASAVLDANQPCIVNGKQAPCVIEGYTPAPATLDGTLAPYVQSM-CSNGMAGVQN--GAACCSENCGTCGGIGCGT--LPGTGGSDHCCASSVLQNNEICGLNGKQAPCVI-EGYTPAPAGLPGTVAPF--------------------------------APSSCPNGLAGVQDGAACCDMKCGQCGGLGCGTLPGTGGSDYCCSSAIIANGTACSVAGSAPCFMD 3115
CS G+ G + DG VCC NC QCGG GC ++ + G +CC S + G CSV+ +PC++D PA +P +CSNG+PG Q D CCL CG CGG GC G G + CC+ I E G+ C + APC + P+PV PAP+ + +AP + + CS G+ G+++ GA CC C CGG GC T LP G ++ CC S VL C ++ ++APCV+ E TP P P + C NG+ G+Q G CC +CG+CGG GC G G D CC I G CSV +APC +D
Sbjct: 344 CSTGIPGIESSDGAVCCPINCTQCGGAGCATVGLPEYGAESCCQSDVLSAGVSCSVSEEAPCVLD--APATEMPAMAPTPEXXXXXXXXXXXXXXXXXXXXXXGDVCSNGIPGIQSGDSCCLAECGACGGSGCAEFGGGLGEDNCCAVRIEEYGELCSVALAAPCYVDAPPPTPVTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPPAPSEMP-VMAPTDEVVVCSTGIRGIESSDGAVCCPLGCTQCGGEGCSTVGLPEYG-AESCCQSDVLSAGVSCSVS-EEAPCVLDETPTPEPNAAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGDVCSNGIPGIQSGITCCLAECGECGGPGCAEFGGGLGQDNCCQGRIEEYGELCSVTLAAPCIVD 791 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5288.12669.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig5288.12669.1 >prot_H-paniculata_contig5288.12669.1 ID=prot_H-paniculata_contig5288.12669.1|Name=mRNA_H-paniculata_contig5288.12669.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=1136bp MRRTGRTGRRGRGLTAATFLVVGCLLFTAAAERSSEGPRRPFRRRASHTVback to top mRNA from alignment at H-paniculata_contig5288:305..13471+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig5288.12669.1 ID=mRNA_H-paniculata_contig5288.12669.1|Name=mRNA_H-paniculata_contig5288.12669.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=13167bp|location=Sequence derived from alignment at H-paniculata_contig5288:305..13471+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig5288:305..13471+ >mRNA_H-paniculata_contig5288.12669.1 ID=mRNA_H-paniculata_contig5288.12669.1|Name=mRNA_H-paniculata_contig5288.12669.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=6816bp|location=Sequence derived from alignment at H-paniculata_contig5288:305..13471+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |