mRNA_H-paniculata_contig52850.12665.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig52850.12665.1 vs. uniprot
Match: A0A6H5K7D8_9PHAE (CobW C-terminal domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K7D8_9PHAE) HSP 1 Score: 92.0 bits (227), Expect = 1.230e-20 Identity = 38/42 (90.48%), Postives = 40/42 (95.24%), Query Frame = 1
Query: 1 TDQLFHKWHPLMDHLKKEPRLRFLVRMKPDGSGPLDNMCGCC 126
TDQLFHKWHPLM+ L+ EPRLRFLVRMKPDGSGPLDNMCGCC
Sbjct: 896 TDQLFHKWHPLMESLRAEPRLRFLVRMKPDGSGPLDNMCGCC 937
BLAST of mRNA_H-paniculata_contig52850.12665.1 vs. uniprot
Match: A0A1Q9DSB4_SYMMI (Uncharacterized protein n=3 Tax=Symbiodinium TaxID=2949 RepID=A0A1Q9DSB4_SYMMI) HSP 1 Score: 76.6 bits (187), Expect = 2.100e-15 Identity = 29/42 (69.05%), Postives = 37/42 (88.10%), Query Frame = 1
Query: 1 TDQLFHKWHPLMDHLKKEPRLRFLVRMKPDGSGPLDNMCGCC 126
T+++FH+WHPLMD L++ PRLRFL+R+KP SGPLD MCGCC
Sbjct: 298 TNEVFHQWHPLMDGLRRRPRLRFLIRLKPMDSGPLDGMCGCC 339
BLAST of mRNA_H-paniculata_contig52850.12665.1 vs. uniprot
Match: A0A812J8Y9_9DINO (Cbwd1 protein n=1 Tax=Symbiodinium sp. CCMP2592 TaxID=631055 RepID=A0A812J8Y9_9DINO) HSP 1 Score: 77.0 bits (188), Expect = 2.350e-15 Identity = 29/42 (69.05%), Postives = 38/42 (90.48%), Query Frame = 1
Query: 1 TDQLFHKWHPLMDHLKKEPRLRFLVRMKPDGSGPLDNMCGCC 126
T+++FH+WHPLMD L++ PRLRFL+R+KP SGPLD+MCGCC
Sbjct: 765 TNEVFHQWHPLMDGLRRRPRLRFLIRLKPMDSGPLDSMCGCC 806
BLAST of mRNA_H-paniculata_contig52850.12665.1 vs. uniprot
Match: A0A7S4G9Z6_9EUGL (Hypothetical protein n=3 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4G9Z6_9EUGL) HSP 1 Score: 76.6 bits (187), Expect = 3.180e-15 Identity = 30/42 (71.43%), Postives = 35/42 (83.33%), Query Frame = 1
Query: 1 TDQLFHKWHPLMDHLKKEPRLRFLVRMKPDGSGPLDNMCGCC 126
+D +FHKWHPLM L+ PRLR L+R+KPDGSGPLD MCGCC
Sbjct: 463 SDAVFHKWHPLMAQLRTMPRLRLLIRVKPDGSGPLDTMCGCC 504
BLAST of mRNA_H-paniculata_contig52850.12665.1 vs. uniprot
Match: A0A7S0Q4E2_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0Q4E2_9EUKA) HSP 1 Score: 73.2 bits (178), Expect = 5.310e-14 Identity = 28/42 (66.67%), Postives = 35/42 (83.33%), Query Frame = 1
Query: 1 TDQLFHKWHPLMDHLKKEPRLRFLVRMKPDGSGPLDNMCGCC 126
+ +LFHKWHPLM L++ PR+R L+R KPDGSGPL +MCGCC
Sbjct: 778 SKELFHKWHPLMVGLRRNPRIRMLIRAKPDGSGPLGDMCGCC 819
BLAST of mRNA_H-paniculata_contig52850.12665.1 vs. uniprot
Match: A0A7S4T5I0_9DINO (Hypothetical protein n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4T5I0_9DINO) HSP 1 Score: 72.8 bits (177), Expect = 7.270e-14 Identity = 29/42 (69.05%), Postives = 36/42 (85.71%), Query Frame = 1
Query: 1 TDQLFHKWHPLMDHLKKEPRLRFLVRMKPDGSGPLDNMCGCC 126
T ++FH+WHPLM+ LK+ PRLRFL+R+KP SGPLD MCGCC
Sbjct: 616 TKEVFHQWHPLMNGLKRRPRLRFLLRLKPLESGPLDAMCGCC 657
BLAST of mRNA_H-paniculata_contig52850.12665.1 vs. uniprot
Match: A0A813G2P0_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813G2P0_POLGL) HSP 1 Score: 71.2 bits (173), Expect = 2.530e-13 Identity = 28/42 (66.67%), Postives = 35/42 (83.33%), Query Frame = 1
Query: 1 TDQLFHKWHPLMDHLKKEPRLRFLVRMKPDGSGPLDNMCGCC 126
T ++FH+WHP+M LK+ PRLRFL+R+KP SGPLD MCGCC
Sbjct: 729 TKEVFHQWHPVMAGLKRRPRLRFLLRLKPMDSGPLDAMCGCC 770
BLAST of mRNA_H-paniculata_contig52850.12665.1 vs. uniprot
Match: A0A7S4F3Q4_CHRCT (Hypothetical protein n=2 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4F3Q4_CHRCT) HSP 1 Score: 70.9 bits (172), Expect = 3.450e-13 Identity = 27/42 (64.29%), Postives = 34/42 (80.95%), Query Frame = 1
Query: 1 TDQLFHKWHPLMDHLKKEPRLRFLVRMKPDGSGPLDNMCGCC 126
+ +LFHKWHPLM L++ P +R L+R KPDGSGPL +MCGCC
Sbjct: 816 SKELFHKWHPLMVGLRRNPAIRMLIRAKPDGSGPLGDMCGCC 857
BLAST of mRNA_H-paniculata_contig52850.12665.1 vs. uniprot
Match: A0A7S2GXT0_9EUKA (Hypothetical protein n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2GXT0_9EUKA) HSP 1 Score: 68.2 bits (165), Expect = 5.710e-13 Identity = 26/40 (65.00%), Postives = 33/40 (82.50%), Query Frame = 1
Query: 7 QLFHKWHPLMDHLKKEPRLRFLVRMKPDGSGPLDNMCGCC 126
+ FH+WHPL+ L+ PR+R LVR+KPDGSGPL +MCGCC
Sbjct: 151 ETFHQWHPLLASLRTTPRMRMLVRVKPDGSGPLADMCGCC 190
BLAST of mRNA_H-paniculata_contig52850.12665.1 vs. uniprot
Match: A0A7S3LQG0_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3LQG0_9STRA) HSP 1 Score: 64.7 bits (156), Expect = 5.110e-11 Identity = 25/42 (59.52%), Postives = 32/42 (76.19%), Query Frame = 1
Query: 1 TDQLFHKWHPLMDHLKKEPRLRFLVRMKPDGSGPLDNMCGCC 126
T + FHK+H LMD L E ++R L+R+KPDG+GPL MCGCC
Sbjct: 763 TKETFHKYHALMDSLNNEMKVRMLIRVKPDGNGPLGEMCGCC 804 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig52850.12665.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 21
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig52850.12665.1 >prot_H-paniculata_contig52850.12665.1 ID=prot_H-paniculata_contig52850.12665.1|Name=mRNA_H-paniculata_contig52850.12665.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=43bp TDQLFHKWHPLMDHLKKEPRLRFLVRMKPDGSGPLDNMCGCC*back to top mRNA from alignment at H-paniculata_contig52850:185..313+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig52850.12665.1 ID=mRNA_H-paniculata_contig52850.12665.1|Name=mRNA_H-paniculata_contig52850.12665.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=129bp|location=Sequence derived from alignment at H-paniculata_contig52850:185..313+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig52850:185..313+ >mRNA_H-paniculata_contig52850.12665.1 ID=mRNA_H-paniculata_contig52850.12665.1|Name=mRNA_H-paniculata_contig52850.12665.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=258bp|location=Sequence derived from alignment at H-paniculata_contig52850:185..313+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |