mRNA_H-paniculata_contig52791.12658.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig52791.12658.1
Unique NamemRNA_H-paniculata_contig52791.12658.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig52791.12658.1 vs. uniprot
Match: A0A8F0FDA4_9PHAE (NADH dehydrogenase subunit 11 n=1 Tax=Protohalopteris sp. TaxID=2843287 RepID=A0A8F0FDA4_9PHAE)

HSP 1 Score: 402 bits (1033), Expect = 8.290e-142
Identity = 185/200 (92.50%), Postives = 196/200 (98.00%), Query Frame = 1 
Query:    1 MKITINNLIIWVKSGSTVLQACEAIGEKIPRFCYHKKLFIAGNCRMCFVEVGNSPKPQVSCSLPFLPNMSILTNSSLVRKAREGILEFILLNHPLDCPVCDQGGECDLQEQNFHFGSDRGRFFFKKNSMGDTFWGLLIKTIMRRCILCTRCVRYLDLVAGFFLVGVTNRGGHSGINTFVDSFVGTEISGGVIELCPVGWL 600
            MKI INNLIIWVK GSTVLQACEAIGEKIPRFCYHKKLFIAGNCRMCFVEVGNSPKPQVSC+LPFLPNMSILTNSSLVRKARE +LEFILLNHPLDCPVCDQGGECDLQEQNFHFGSDRGRFFFKKNS+GDTFWGLLIKTIMRRCILCTRC+RYLDL+AGFFLVGVTNRGG+SGI TF+++F+GTEISGGVIELCPVGW+
Sbjct:    1 MKIIINNLIIWVKKGSTVLQACEAIGEKIPRFCYHKKLFIAGNCRMCFVEVGNSPKPQVSCALPFLPNMSILTNSSLVRKARESVLEFILLNHPLDCPVCDQGGECDLQEQNFHFGSDRGRFFFKKNSIGDTFWGLLIKTIMRRCILCTRCIRYLDLIAGFFLVGVTNRGGYSGIGTFIENFLGTEISGGVIELCPVGWV 200
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BLAST of mRNA_H-paniculata_contig52791.12658.1 vs. uniprot
Match: A0A4Y5T8Q6_9PHAE (NADH dehydrogenase subunit 11 n=1 Tax=Dictyopteris divaricata TaxID=156996 RepID=A0A4Y5T8Q6_9PHAE)

HSP 1 Score: 352 bits (902), Expect = 7.490e-122
Identity = 155/199 (77.89%), Postives = 181/199 (90.95%), Query Frame = 1 
Query:    1 MKITINNLIIWVKSGSTVLQACEAIGEKIPRFCYHKKLFIAGNCRMCFVEVGNSPKPQVSCSLPFLPNMSILTNSSLVRKAREGILEFILLNHPLDCPVCDQGGECDLQEQNFHFGSDRGRFFFKKNSMGDTFWGLLIKTIMRRCILCTRCVRYLDLVAGFFLVGVTNRGGHSGINTFVDSFVGTEISGGVIELCPVGW 597
            MKI INNL++WVK GSTVLQACEA+GE+IPRFCYHKKLF+AGNCRMC VEVGNSPKPQVSC+LPF+PNMSI TNS+LV+KAREG++EF+LLNHPLDCP+CDQGGECDLQEQ+FHFGSDRGRFFF K+S+ DTFWG L+KT+MRRCI+CTRCVRY +L+ G  +VG  NRGG S I TFV++ + TE+SGGVIELCPVGW
Sbjct:    1 MKIIINNLVVWVKKGSTVLQACEAVGEEIPRFCYHKKLFLAGNCRMCLVEVGNSPKPQVSCALPFVPNMSIFTNSALVKKAREGVMEFLLLNHPLDCPICDQGGECDLQEQSFHFGSDRGRFFFTKSSVVDTFWGSLVKTVMRRCIVCTRCVRYTELIGGSGVVGTVNRGGQSEIGTFVETSLKTEVSGGVIELCPVGW 199
[Close]
BLAST of mRNA_H-paniculata_contig52791.12658.1 vs. uniprot
Match: Q2TUA0_DICDH (NADH dehydrogenase subunit 11 n=1 Tax=Dictyota dichotoma TaxID=2876 RepID=Q2TUA0_DICDH)

HSP 1 Score: 345 bits (885), Expect = 2.920e-119
Identity = 154/199 (77.39%), Postives = 178/199 (89.45%), Query Frame = 1 
Query:    1 MKITINNLIIWVKSGSTVLQACEAIGEKIPRFCYHKKLFIAGNCRMCFVEVGNSPKPQVSCSLPFLPNMSILTNSSLVRKAREGILEFILLNHPLDCPVCDQGGECDLQEQNFHFGSDRGRFFFKKNSMGDTFWGLLIKTIMRRCILCTRCVRYLDLVAGFFLVGVTNRGGHSGINTFVDSFVGTEISGGVIELCPVGW 597
            MKITINNL++WVK GSTVLQACEA GE++PRFCYH+KL IAGNCRMC VEVGNSPKPQVSC+LPF+PNMSI T S+LVRKAREG++EFIL+NHPLDCP+CDQGGECDLQEQ+FHFGSDRGRFFF KNS  DTFWG L+KT+M+RCI+CTRCVRY DLV G  +VG TNRG +S I  FV++ + TE+SGGVI+LCPVGW
Sbjct:    1 MKITINNLVVWVKGGSTVLQACEAAGEEVPRFCYHEKLLIAGNCRMCLVEVGNSPKPQVSCALPFIPNMSIFTESALVRKAREGVMEFILVNHPLDCPICDQGGECDLQEQSFHFGSDRGRFFFLKNSSVDTFWGALVKTVMKRCIVCTRCVRYSDLVGGTGIVGTTNRGVNSEIGMFVETSLKTEVSGGVIDLCPVGW 199
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BLAST of mRNA_H-paniculata_contig52791.12658.1 vs. uniprot
Match: A0A0G2RLB7_TUROR (NADH dehydrogenase subunit 11 n=24 Tax=Sargassaceae TaxID=3014 RepID=A0A0G2RLB7_TUROR)

HSP 1 Score: 320 bits (819), Expect = 3.820e-109
Identity = 143/201 (71.14%), Postives = 171/201 (85.07%), Query Frame = 1 
Query:    1 MKITINNLIIWVKSGSTVLQACEAIGEKIPRFCYHKKLFIAGNCRMCFVEVGNSPKPQVSCSLPFLPNMSILTNSSLVRKAREGILEFILLNHPLDCPVCDQGGECDLQEQNFHFGSDRGRFFFKKNSMGDTFWGLLIKTIMRRCILCTRCVRYLDLVAGFFLVGVTNRGGHSGINTFVDSFVGTEISGGVIELCPVGWLS 603
            + ITIN L+IWVK GSTV+QACEA G KIPRFCYH KLFIAGNCRMC VEVGNSPKPQ SC+LPF+PNM I TN++LV KA+E ++EF+LL+HPLDCPVCDQGGEC+LQEQ+F++GSDRGRFFF K S+GDTFWG LIKT++RRCI+CTRCVRY  L+ G  ++G +NRGG+S I  F ++ + TE SGGVIELCPV W S
Sbjct:    2 INITINELLIWVKKGSTVIQACEAAGVKIPRFCYHDKLFIAGNCRMCLVEVGNSPKPQASCALPFMPNMRIFTNTALVHKAQEFVMEFLLLHHPLDCPVCDQGGECELQEQSFNYGSDRGRFFFFKKSLGDTFWGSLIKTVLRRCIVCTRCVRYTSLIGGSDIIGTSNRGGNSEIGMFKENVLKTETSGGVIELCPVCWSS 202
[Close]
BLAST of mRNA_H-paniculata_contig52791.12658.1 vs. uniprot
Match: Q9XNR7_PYLLI (NADH dehydrogenase subunit 11 n=6 Tax=Ectocarpales TaxID=2877 RepID=Q9XNR7_PYLLI)

HSP 1 Score: 316 bits (809), Expect = 1.520e-107
Identity = 137/201 (68.16%), Postives = 170/201 (84.58%), Query Frame = 1 
Query:    1 MKITINNLIIWVKSGSTVLQACEAIGEKIPRFCYHKKLFIAGNCRMCFVEVGNSPKPQVSCSLPFLPNMSILTNSSLVRKAREGILEFILLNHPLDCPVCDQGGECDLQEQNFHFGSDRGRFFFKKNSMGDTFWGLLIKTIMRRCILCTRCVRYLDLVAGFFLVGVTNRGGHSGINTFVDSFVGTEISGGVIELCPVGWLS 603
            + I++N+L+IW+K GSTV+QAC+  G ++PRFCYH KLFIAGNCRMC VEV  SPKPQ SC+LPFLP + I TN++LVRKA+E ++E +LL+HPLDCPVCDQGGEC+LQEQ+F+FGSDRGRFFF KNS+GDTFWG LIKT++RRC++CTRCVRY   + G  L+G +NRGGHS I  F ++ + TE SGGVIELCPVGWLS
Sbjct:    2 LTISVNDLVIWLKKGSTVIQACQVAGAQVPRFCYHDKLFIAGNCRMCLVEVSKSPKPQASCALPFLPGLRIFTNTALVRKAQESVMELLLLHHPLDCPVCDQGGECELQEQSFNFGSDRGRFFFFKNSLGDTFWGSLIKTVLRRCVVCTRCVRYTHQIGGSDLIGTSNRGGHSEIGMFKENTLKTETSGGVIELCPVGWLS 202
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BLAST of mRNA_H-paniculata_contig52791.12658.1 vs. uniprot
Match: E6ZET3_ECTSI (NADH dehydrogenase subunit 11 n=3 Tax=Ectocarpales TaxID=2877 RepID=E6ZET3_ECTSI)

HSP 1 Score: 313 bits (802), Expect = 1.590e-106
Identity = 137/200 (68.50%), Postives = 169/200 (84.50%), Query Frame = 1 
Query:    1 MKITINNLIIWVKSGSTVLQACEAIGEKIPRFCYHKKLFIAGNCRMCFVEVGNSPKPQVSCSLPFLPNMSILTNSSLVRKAREGILEFILLNHPLDCPVCDQGGECDLQEQNFHFGSDRGRFFFKKNSMGDTFWGLLIKTIMRRCILCTRCVRYLDLVAGFFLVGVTNRGGHSGINTFVDSFVGTEISGGVIELCPVGWL 600
            + I+IN+LI+WV+ GSTV+QAC+A G ++PRFCYH KLF+AGNCRMC VEV  SPKPQ SC+LPFLPN+ I TN++LVRKA+E ++E +LL+HPLDCPVCDQGGEC+LQEQ+F++GSDRGRF F KNS+GDTFWG LIKT++RRCILCTRCVRY   + G  L+G +NRGGHS I  F +S + TE SGGVIELCPV W+
Sbjct:    2 LTISINDLIVWVRKGSTVIQACQAAGAQVPRFCYHDKLFVAGNCRMCLVEVSKSPKPQASCALPFLPNLRIFTNTALVRKAQESVMELLLLHHPLDCPVCDQGGECELQEQSFNYGSDRGRFLFFKNSLGDTFWGSLIKTVLRRCILCTRCVRYTHQIGGKDLIGTSNRGGHSEIGMFKESVLKTETSGGVIELCPVCWI 201
[Close]
BLAST of mRNA_H-paniculata_contig52791.12658.1 vs. uniprot
Match: A0A8F0K0N1_9PHAE (NADH dehydrogenase subunit 11 n=1 Tax=Desmarestia aculeata TaxID=62298 RepID=A0A8F0K0N1_9PHAE)

HSP 1 Score: 312 bits (800), Expect = 3.210e-106
Identity = 138/199 (69.35%), Postives = 167/199 (83.92%), Query Frame = 1 
Query:    1 MKITINNLIIWVKSGSTVLQACEAIGEKIPRFCYHKKLFIAGNCRMCFVEVGNSPKPQVSCSLPFLPNMSILTNSSLVRKAREGILEFILLNHPLDCPVCDQGGECDLQEQNFHFGSDRGRFFFKKNSMGDTFWGLLIKTIMRRCILCTRCVRYLDLVAGFFLVGVTNRGGHSGINTFVDSFVGTEISGGVIELCPVGW 597
            + I+IN L++WVK GSTV+QAC+A G KIPRFCYH KLF+AGNCRMC VEV N+PKPQ SC+LPF+PN+ I TNS+LVRKA+E ++E +LL+HPLDCPVCDQGGEC+LQEQ+F+FGSDRGRFFF KNS+GDTFWG LIKT++RRCI+CTRCVRY   + G   VG +NRG HS I  F ++ + TE SGGVIELCPV W
Sbjct:    2 INISINELLVWVKKGSTVIQACQAAGAKIPRFCYHDKLFVAGNCRMCLVEVNNAPKPQASCALPFMPNLKIFTNSALVRKAQEFVMELMLLHHPLDCPVCDQGGECELQEQSFNFGSDRGRFFFFKNSLGDTFWGSLIKTVLRRCIVCTRCVRYTSQIGGNDSVGTSNRGSHSEIGMFKENILKTETSGGVIELCPVCW 200
[Close]
BLAST of mRNA_H-paniculata_contig52791.12658.1 vs. uniprot
Match: A0A2R4QQ95_9PHAE (NADH dehydrogenase subunit 11 n=6 Tax=Fucus TaxID=3011 RepID=A0A2R4QQ95_9PHAE)

HSP 1 Score: 310 bits (795), Expect = 1.850e-105
Identity = 139/201 (69.15%), Postives = 168/201 (83.58%), Query Frame = 1 
Query:    1 MKITINNLIIWVKSGSTVLQACEAIGEKIPRFCYHKKLFIAGNCRMCFVEVGNSPKPQVSCSLPFLPNMSILTNSSLVRKAREGILEFILLNHPLDCPVCDQGGECDLQEQNFHFGSDRGRFFFKKNSMGDTFWGLLIKTIMRRCILCTRCVRYLDLVAGFFLVGVTNRGGHSGINTFVDSFVGTEISGGVIELCPVGWLS 603
            + I+IN L+IWVK GSTV+QAC++ G KIPRFCYH KLFIAGNCRMC VEVGN+PKPQ SC+LPF+PNM I TN++LVRKA+E ++E +LL+HPLDCPVCDQGGEC+LQEQ+F++GSDRGRFFF K S+GDTFWG LIKT++RRCI+CTRCVRY   + G   +G +NRGG S I  F +S + TE SGGVIELCPV W S
Sbjct:    2 INISINELLIWVKKGSTVIQACQSAGVKIPRFCYHDKLFIAGNCRMCLVEVGNAPKPQASCALPFMPNMRIYTNTALVRKAQEFVMELLLLHHPLDCPVCDQGGECELQEQSFNYGSDRGRFFFFKKSLGDTFWGSLIKTVLRRCIVCTRCVRYTYQIGGSEAIGTSNRGGSSEIGMFKESVLKTETSGGVIELCPVAWHS 202
[Close]
BLAST of mRNA_H-paniculata_contig52791.12658.1 vs. uniprot
Match: F8UWN5_9PHAE (NADH dehydrogenase subunit 11 n=73 Tax=Phaeophyceae TaxID=2870 RepID=F8UWN5_9PHAE)

HSP 1 Score: 309 bits (792), Expect = 5.490e-105
Identity = 138/199 (69.35%), Postives = 165/199 (82.91%), Query Frame = 1 
Query:    1 MKITINNLIIWVKSGSTVLQACEAIGEKIPRFCYHKKLFIAGNCRMCFVEVGNSPKPQVSCSLPFLPNMSILTNSSLVRKAREGILEFILLNHPLDCPVCDQGGECDLQEQNFHFGSDRGRFFFKKNSMGDTFWGLLIKTIMRRCILCTRCVRYLDLVAGFFLVGVTNRGGHSGINTFVDSFVGTEISGGVIELCPVGW 597
            + I+IN L+IWVK GSTV+QAC+A G  IPRFCYH KLFIAGNCRMC VEV NSPKPQ SC+LPFLPN+ I TN++LVRKA+E ++E +LL+HPLDCPVCDQGGEC+LQEQ+F+FGSDRGRF F KNS+ DTFWG LIKT++RRCI+CTRCVRY   + G   +G +NRGGHS I  F +S + +E SGGVIELCPV W
Sbjct:    2 LNISINELLIWVKKGSTVIQACQAAGANIPRFCYHDKLFIAGNCRMCLVEVSNSPKPQASCALPFLPNLRIFTNTALVRKAQESVMELLLLHHPLDCPVCDQGGECELQEQSFNFGSDRGRFLFFKNSLSDTFWGGLIKTVLRRCIVCTRCVRYTHQIGGNDSLGTSNRGGHSEIGMFKESVLKSETSGGVIELCPVSW 200
[Close]
BLAST of mRNA_H-paniculata_contig52791.12658.1 vs. uniprot
Match: A0A8E8U4G1_9PHAE (Nad11 n=1 Tax=Phaeophyceae sp. TaxID=2249243 RepID=A0A8E8U4G1_9PHAE)

HSP 1 Score: 299 bits (765), Expect = 7.100e-101
Identity = 135/201 (67.16%), Postives = 160/201 (79.60%), Query Frame = 1 
Query:    1 MKITINNLIIWVKSGSTVLQACEAIGEKIPRFCYHKKLFIAGNCRMCFVEVGNSPKPQVSCSLPFLPNMSILTNSSLVRKAREGILEFILLNHPLDCPVCDQGGECDLQEQNFHFGSDRGRFFFKKNSMGDTFWGLLIKTIMRRCILCTRCVRYLDLVAGFFLVGVTNRGGHSGINTFVDSFVGTEISGGVIELCPVGWLS 603
            + I IN +I+WVK GSTV+QAC+A+G  IPRFCYH KL IAGNCRMC VEV NSPKPQ SC+LPFLP + I T S+LVRKA+E ++E ILLNHPLDCP+CDQGGEC+LQEQ+FH+GSDRGRFFF KNS+G   WG  IKT++RRCILCTRCVRY   + G   +GV++RG  S I  F  S V +EISGGVI+LCPV W S
Sbjct:    2 ISIHINEIIVWVKRGSTVIQACQAVGAIIPRFCYHDKLSIAGNCRMCLVEVNNSPKPQASCALPFLPGLRIFTTSALVRKAQEFVMELILLNHPLDCPICDQGGECELQEQSFHYGSDRGRFFFPKNSLGGALWGSFIKTVLRRCILCTRCVRYTSQIGGIDALGVSSRGSQSEITIFKGSVVKSEISGGVIDLCPVCWSS 202
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig52791.12658.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A8F0FDA4_9PHAE8.290e-14292.50NADH dehydrogenase subunit 11 n=1 Tax=Protohalopte... [more]
A0A4Y5T8Q6_9PHAE7.490e-12277.89NADH dehydrogenase subunit 11 n=1 Tax=Dictyopteris... [more]
Q2TUA0_DICDH2.920e-11977.39NADH dehydrogenase subunit 11 n=1 Tax=Dictyota dic... [more]
A0A0G2RLB7_TUROR3.820e-10971.14NADH dehydrogenase subunit 11 n=24 Tax=Sargassacea... [more]
Q9XNR7_PYLLI1.520e-10768.16NADH dehydrogenase subunit 11 n=6 Tax=Ectocarpales... [more]
E6ZET3_ECTSI1.590e-10668.50NADH dehydrogenase subunit 11 n=3 Tax=Ectocarpales... [more]
A0A8F0K0N1_9PHAE3.210e-10669.35NADH dehydrogenase subunit 11 n=1 Tax=Desmarestia ... [more]
A0A2R4QQ95_9PHAE1.850e-10569.15NADH dehydrogenase subunit 11 n=6 Tax=Fucus TaxID=... [more]
F8UWN5_9PHAE5.490e-10569.35NADH dehydrogenase subunit 11 n=73 Tax=Phaeophycea... [more]
A0A8E8U4G1_9PHAE7.100e-10167.16Nad11 n=1 Tax=Phaeophyceae sp. TaxID=2249243 RepID... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig52791contigH-paniculata_contig52791:559..1164 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeViridiplantae
Seed ortholog score250.8
Seed ortholog evalue5.6e-64
Seed eggNOG ortholog88036.EFJ07644
KEGG rclassRC00061
KEGG koko:K03934
KEGG TC3.D.1.6
KEGG ReactionR11945
KEGG Pathwayko00190,ko01100,ko04714,ko04723,ko04932,ko05010,ko05012,ko05016,map00190,map01100,map04714,map04723,map04932,map05010,map05012,map05016
KEGG ModuleM00143
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0003954,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0005746,GO:0005747,GO:0006091,GO:0006950,GO:0006979,GO:0008137,GO:0008150,GO:0008152,GO:0009507,GO:0009536,GO:0009853,GO:0009987,GO:0015980,GO:0016020,GO:0016491,GO:0016651,GO:0016655,GO:0019866,GO:0030964,GO:0031090,GO:0031966,GO:0031967,GO:0031975,GO:0032991,GO:0043094,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044422,GO:0044424,GO:0044425,GO:0044429,GO:0044444,GO:0044446,GO:0044455,GO:0044464,GO:0045271,GO:0045333,GO:0048037,GO:0050136,GO:0050896,GO:0051536,GO:0051540,GO:0055114,GO:0070469,GO:0098796,GO:0098798,GO:0098800,GO:0098803,GO:1902494,GO:1990204
EggNOG free text desc.Belongs to the complex I 75 kDa subunit family
EggNOG OGs37RAU@33090,3GFDF@35493,COG1034@1,KOG2282@2759
EC1.6.5.3,1.6.99.3
COG Functional cat.C
Best tax levelStreptophyta
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Exons1
Model size606
Cds size606
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930530.0847387-CDS-H-paniculata_contig52791:558..11641622930530.0847387-CDS-H-paniculata_contig52791:558..1164Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig52791 559..1164 +
1691481334.0109086-CDS-H-paniculata_contig52791:558..11641691481334.0109086-CDS-H-paniculata_contig52791:558..1164Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig52791 559..1164 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig52791.12658.1prot_H-paniculata_contig52791.12658.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig52791 559..1164 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig52791.12658.1

>prot_H-paniculata_contig52791.12658.1 ID=prot_H-paniculata_contig52791.12658.1|Name=mRNA_H-paniculata_contig52791.12658.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=202bp
MKITINNLIIWVKSGSTVLQACEAIGEKIPRFCYHKKLFIAGNCRMCFVE
VGNSPKPQVSCSLPFLPNMSILTNSSLVRKAREGILEFILLNHPLDCPVC
DQGGECDLQEQNFHFGSDRGRFFFKKNSMGDTFWGLLIKTIMRRCILCTR
CVRYLDLVAGFFLVGVTNRGGHSGINTFVDSFVGTEISGGVIELCPVGWL
S*
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mRNA from alignment at H-paniculata_contig52791:559..1164+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig52791.12658.1 ID=mRNA_H-paniculata_contig52791.12658.1|Name=mRNA_H-paniculata_contig52791.12658.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=606bp|location=Sequence derived from alignment at H-paniculata_contig52791:559..1164+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGAAAATTACAATTAATAATTTAATTATATGGGTTAAATCGGGTTCTAC
GGTACTTCAAGCTTGTGAGGCCATTGGAGAAAAAATACCTCGTTTTTGTT
ACCATAAAAAACTTTTTATAGCCGGTAATTGTAGAATGTGTTTTGTGGAA
GTGGGCAATTCCCCAAAACCACAAGTTTCTTGTTCTTTACCTTTTTTACC
TAATATGAGTATACTAACAAATTCTTCTTTAGTTCGCAAAGCTCGTGAAG
GTATTTTAGAATTTATTTTATTAAACCACCCTTTAGACTGTCCTGTATGT
GATCAAGGTGGAGAATGTGATTTACAAGAGCAAAATTTTCATTTTGGTTC
TGATAGGGGAAGGTTTTTTTTTAAAAAAAACTCTATGGGTGATACGTTTT
GGGGTTTATTAATTAAAACAATAATGCGACGCTGTATTCTTTGTACTCGT
TGTGTTCGTTACTTAGATTTAGTTGCTGGTTTTTTTTTAGTTGGTGTGAC
TAATCGTGGTGGTCATTCGGGAATTAACACTTTTGTGGATAGTTTTGTAG
GAACAGAAATTTCAGGCGGGGTTATTGAATTGTGTCCGGTTGGGTGGTTA
TCTTAA
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Coding sequence (CDS) from alignment at H-paniculata_contig52791:559..1164+

>mRNA_H-paniculata_contig52791.12658.1 ID=mRNA_H-paniculata_contig52791.12658.1|Name=mRNA_H-paniculata_contig52791.12658.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1212bp|location=Sequence derived from alignment at H-paniculata_contig52791:559..1164+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGAAAATTACAATTAATAATTTAATTATATGGGTTAAATCGGGTTCTAC
GGTACTTCAAGCTTGTGAGGCCATTGGAGAAAAAATACCTCGTTTTTGTT
ACCATAAAAAACTTTTTATAGCCGGTAATTGTAGAATGTGTTTTGTGGAA
GTGGGCAATTCCCCAAAACCACAAGTTTCTTGTTCTTTACCTTTTTTACC
TAATATGAGTATACTAACAAATTCTTCTTTAGTTCGCAAAGCTCGTGAAG
GTATTTTAGAATTTATTTTATTAAACCACCCTTTAGACTGTCCTGTATGT
GATCAAGGTGGAGAATGTGATTTACAAGAGCAAAATTTTCATTTTGGTTC
TGATAGGGGAAGGTTTTTTTTTAAAAAAAACTCTATGGGTGATACGTTTT
GGGGTTTATTAATTAAAACAATAATGCGACGCTGTATTCTTTGTACTCGT
TGTGTTCGTTACTTAGATTTAGTTGCTGGTTTTTTTTTAGTTGGTGTGAC
TAATCGTGGTGGTCATTCGGGAATTAACACTTTTGTGGATAGTTTTGTAG
GAACAGAAATTTCAGGCGGGGTTATTGAATTGTGTCCGGTTGGGTGGTTA
TCTTAAATGAAAATTACAATTAATAATTTAATTATATGGGTTAAATCGGG
TTCTACGGTACTTCAAGCTTGTGAGGCCATTGGAGAAAAAATACCTCGTT
TTTGTTACCATAAAAAACTTTTTATAGCCGGTAATTGTAGAATGTGTTTT
GTGGAAGTGGGCAATTCCCCAAAACCACAAGTTTCTTGTTCTTTACCTTT
TTTACCTAATATGAGTATACTAACAAATTCTTCTTTAGTTCGCAAAGCTC
GTGAAGGTATTTTAGAATTTATTTTATTAAACCACCCTTTAGACTGTCCT
GTATGTGATCAAGGTGGAGAATGTGATTTACAAGAGCAAAATTTTCATTT
TGGTTCTGATAGGGGAAGGTTTTTTTTTAAAAAAAACTCTATGGGTGATA
CGTTTTGGGGTTTATTAATTAAAACAATAATGCGACGCTGTATTCTTTGT
ACTCGTTGTGTTCGTTACTTAGATTTAGTTGCTGGTTTTTTTTTAGTTGG
TGTGACTAATCGTGGTGGTCATTCGGGAATTAACACTTTTGTGGATAGTT
TTGTAGGAACAGAAATTTCAGGCGGGGTTATTGAATTGTGTCCGGTTGGG
TGGTTATCTTAA
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