prot_H-paniculata_contig5277.12657.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-paniculata_contig5277.12657.1
Unique Name	prot_H-paniculata_contig5277.12657.1
Type	polypeptide
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length	125

Homology

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BLAST of mRNA_H-paniculata_contig5277.12657.1 vs. uniprot
Match: A0A6H5KW20_9PHAE (UBC core domain-containing protein n=5 Tax=Ochrophyta TaxID=2696291 RepID=A0A6H5KW20_9PHAE)

HSP 1 Score: 266 bits (679), Expect = 6.100e-90
Identity = 125/125 (100.00%), Postives = 125/125 (100.00%), Query Frame = 0

Query:    1 MSTPARRRLMRDFRRLQNDPPSGVTGAPMDNNILAWQAVIFGPDDTPWEGGTFKLLLEFSEDYPNKPPSVRFLTRMFHPNIYNNGQICLDILQNQWSPIYDICAILTSIQSLLCDPNPASPANSE 125
            MSTPARRRLMRDFRRLQNDPPSGVTGAPMDNNILAWQAVIFGPDDTPWEGGTFKLLLEFSEDYPNKPPSVRFLTRMFHPNIYNNGQICLDILQNQWSPIYDICAILTSIQSLLCDPNPASPANSE
Sbjct:    1 MSTPARRRLMRDFRRLQNDPPSGVTGAPMDNNILAWQAVIFGPDDTPWEGGTFKLLLEFSEDYPNKPPSVRFLTRMFHPNIYNNGQICLDILQNQWSPIYDICAILTSIQSLLCDPNPASPANSE 125

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BLAST of mRNA_H-paniculata_contig5277.12657.1 vs. uniprot
Match: B8CAB3_THAPS (Ubiquitin-conjugating enzyme 1 n=19 Tax=Bacillariophyta TaxID=2836 RepID=B8CAB3_THAPS)

HSP 1 Score: 244 bits (623), Expect = 2.190e-81
Identity = 114/125 (91.20%), Postives = 120/125 (96.00%), Query Frame = 0

Query:    1 MSTPARRRLMRDFRRLQNDPPSGVTGAPMDNNILAWQAVIFGPDDTPWEGGTFKLLLEFSEDYPNKPPSVRFLTRMFHPNIYNNGQICLDILQNQWSPIYDICAILTSIQSLLCDPNPASPANSE 125
            MST ARRRL+RDFRRLQNDPPSGVTGAPMD NI+ WQAVIFGPDDTPWEGGTFKL+LEF+EDYPNK PSVRFLT+MFHPNIYN+GQICLDILQNQWSPIYDI AILTSIQSLLCDPNPASPANSE
Sbjct:    1 MSTSARRRLLRDFRRLQNDPPSGVTGAPMDTNIMLWQAVIFGPDDTPWEGGTFKLVLEFTEDYPNKAPSVRFLTKMFHPNIYNDGQICLDILQNQWSPIYDISAILTSIQSLLCDPNPASPANSE 125

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BLAST of mRNA_H-paniculata_contig5277.12657.1 vs. uniprot
Match: A0A7S0FQ92_9STRA (Hypothetical protein (Fragment) n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0FQ92_9STRA)

HSP 1 Score: 242 bits (618), Expect = 4.960e-81
Identity = 112/124 (90.32%), Postives = 120/124 (96.77%), Query Frame = 0

Query:    1 MSTPARRRLMRDFRRLQNDPPSGVTGAPMDNNILAWQAVIFGPDDTPWEGGTFKLLLEFSEDYPNKPPSVRFLTRMFHPNIYNNGQICLDILQNQWSPIYDICAILTSIQSLLCDPNPASPANS 124
            MST ARRRL+RDF+RLQNDPPSGVTGAPMDNNI+ WQAVIFGPDDTPWEGGTFKL+LEF+EDYPNK P+VRFLT+MFHPNIYN+GQICLDILQNQWSPIYDI AILTSIQSLLCDPNPASPANS
Sbjct:    2 MSTSARRRLLRDFKRLQNDPPSGVTGAPMDNNIMLWQAVIFGPDDTPWEGGTFKLVLEFTEDYPNKAPNVRFLTKMFHPNIYNDGQICLDILQNQWSPIYDISAILTSIQSLLCDPNPASPANS 125

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BLAST of mRNA_H-paniculata_contig5277.12657.1 vs. uniprot
Match: K3WSJ4_GLOUD (UBC core domain-containing protein n=37 Tax=Oomycota TaxID=4762 RepID=K3WSJ4_GLOUD)

HSP 1 Score: 239 bits (610), Expect = 2.100e-79
Identity = 111/125 (88.80%), Postives = 118/125 (94.40%), Query Frame = 0

Query:    1 MSTPARRRLMRDFRRLQNDPPSGVTGAPMDNNILAWQAVIFGPDDTPWEGGTFKLLLEFSEDYPNKPPSVRFLTRMFHPNIYNNGQICLDILQNQWSPIYDICAILTSIQSLLCDPNPASPANSE 125
            MST ARRRLMRDFR+LQNDPPSGV+GAPMDNNI+ WQAVIFGPDDTPWEGGTF L LEFSEDYPNK P+VRF+T+MFHPNIYN+GQICLDILQNQWSPIYDI AILTSIQSLLCDPNP SPANSE
Sbjct:    1 MSTAARRRLMRDFRKLQNDPPSGVSGAPMDNNIMLWQAVIFGPDDTPWEGGTFNLTLEFSEDYPNKAPTVRFITKMFHPNIYNDGQICLDILQNQWSPIYDISAILTSIQSLLCDPNPNSPANSE 125

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BLAST of mRNA_H-paniculata_contig5277.12657.1 vs. uniprot
Match: F0WM57_9STRA (Ubiquitinconjugating enzyme E2 putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WM57_9STRA)

HSP 1 Score: 236 bits (601), Expect = 9.020e-78
Identity = 108/125 (86.40%), Postives = 117/125 (93.60%), Query Frame = 0

Query:    1 MSTPARRRLMRDFRRLQNDPPSGVTGAPMDNNILAWQAVIFGPDDTPWEGGTFKLLLEFSEDYPNKPPSVRFLTRMFHPNIYNNGQICLDILQNQWSPIYDICAILTSIQSLLCDPNPASPANSE 125
            MST ARRRLMRDFR+LQNDPP G++GAPMDNNI+ WQAVIFGPDDTPWEGGTF L LEFSEDYPNK P+V+F+T+MFHPNIYN+GQICLDILQNQWSPIYDI AILTSIQSLLCDPNP SPANSE
Sbjct:   19 MSTAARRRLMRDFRKLQNDPPCGISGAPMDNNIMMWQAVIFGPDDTPWEGGTFNLTLEFSEDYPNKAPTVKFITKMFHPNIYNDGQICLDILQNQWSPIYDISAILTSIQSLLCDPNPNSPANSE 143

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BLAST of mRNA_H-paniculata_contig5277.12657.1 vs. uniprot
Match: A0A4D9CYF5_9STRA (UBC core domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CYF5_9STRA)

HSP 1 Score: 236 bits (602), Expect = 9.480e-78
Identity = 108/125 (86.40%), Postives = 118/125 (94.40%), Query Frame = 0

Query:    1 MSTPARRRLMRDFRRLQNDPPSGVTGAPMDNNILAWQAVIFGPDDTPWEGGTFKLLLEFSEDYPNKPPSVRFLTRMFHPNIYNNGQICLDILQNQWSPIYDICAILTSIQSLLCDPNPASPANSE 125
            MST ARRRLMRD +RLQ+DPP GV GAP+DNNI+ WQAVIFGPDDTPWEGGTFKLLLEF+EDYPNK P+VRF+T+MFHPNIYN+GQICLDILQNQWSPIYD+ AILTSIQSLLCDPNPASPANSE
Sbjct:    1 MSTAARRRLMRDLKRLQSDPPQGVQGAPLDNNIMTWQAVIFGPDDTPWEGGTFKLLLEFTEDYPNKAPAVRFVTKMFHPNIYNDGQICLDILQNQWSPIYDVSAILTSIQSLLCDPNPASPANSE 125

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BLAST of mRNA_H-paniculata_contig5277.12657.1 vs. uniprot
Match: A0A812WBD6_SYMMI (UBC2 protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812WBD6_SYMMI)

HSP 1 Score: 234 bits (597), Expect = 2.220e-77
Identity = 105/125 (84.00%), Postives = 117/125 (93.60%), Query Frame = 0

Query:    1 MSTPARRRLMRDFRRLQNDPPSGVTGAPMDNNILAWQAVIFGPDDTPWEGGTFKLLLEFSEDYPNKPPSVRFLTRMFHPNIYNNGQICLDILQNQWSPIYDICAILTSIQSLLCDPNPASPANSE 125
            MST ARRRLMRDFRRLQNDPP+G+ GAP+DNNI+ WQA++FGPDDTPWEGGTFKLL EFSEDYPNKPP+V+FLT+MFHPNIY +G+ICLDILQNQWSPIYDI A+LTSIQSLL DPNPASPAN E
Sbjct:    1 MSTSARRRLMRDFRRLQNDPPAGIQGAPLDNNIMVWQAIVFGPDDTPWEGGTFKLLAEFSEDYPNKPPAVKFLTKMFHPNIYTDGKICLDILQNQWSPIYDIAAVLTSIQSLLSDPNPASPANGE 125

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BLAST of mRNA_H-paniculata_contig5277.12657.1 vs. uniprot
Match: W7UAM9_9STRA (Ubiquitin-conjugating enzyme e2 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7UAM9_9STRA)

HSP 1 Score: 236 bits (602), Expect = 7.760e-77
Identity = 108/125 (86.40%), Postives = 118/125 (94.40%), Query Frame = 0

Query:    1 MSTPARRRLMRDFRRLQNDPPSGVTGAPMDNNILAWQAVIFGPDDTPWEGGTFKLLLEFSEDYPNKPPSVRFLTRMFHPNIYNNGQICLDILQNQWSPIYDICAILTSIQSLLCDPNPASPANSE 125
            MST ARRRLMRD +RLQ+DPP GV GAP+DNNI+ WQAVIFGPDDTPWEGGTFKLLLEF+EDYPNK P+VRF+T+MFHPNIYN+GQICLDILQNQWSPIYD+ AILTSIQSLLCDPNPASPANSE
Sbjct:    1 MSTAARRRLMRDLKRLQSDPPQGVQGAPLDNNIMTWQAVIFGPDDTPWEGGTFKLLLEFTEDYPNKAPAVRFVTKMFHPNIYNDGQICLDILQNQWSPIYDVSAILTSIQSLLCDPNPASPANSE 125

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BLAST of mRNA_H-paniculata_contig5277.12657.1 vs. uniprot
Match: F1C960_PAESU (Ubiquitin-conjugating enzyme n=8 Tax=Mesangiospermae TaxID=1437183 RepID=F1C960_PAESU)

HSP 1 Score: 232 bits (591), Expect = 1.600e-76
Identity = 104/125 (83.20%), Postives = 117/125 (93.60%), Query Frame = 0

Query:    1 MSTPARRRLMRDFRRLQNDPPSGVTGAPMDNNILAWQAVIFGPDDTPWEGGTFKLLLEFSEDYPNKPPSVRFLTRMFHPNIYNNGQICLDILQNQWSPIYDICAILTSIQSLLCDPNPASPANSE 125
            MSTPAR+RLMRDF+RLQNDPP+G++GAP DNNI+ W AVIFGPDDTPW+GGTFKL L+FSEDYPNKPP+VRF++RMFHPNIY +G ICLDILQNQWSPIYD+ AILTSIQSLLCDPNP SPANSE
Sbjct:    1 MSTPARKRLMRDFKRLQNDPPAGISGAPHDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFSEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSE 125

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BLAST of mRNA_H-paniculata_contig5277.12657.1 vs. uniprot
Match: M4DID7_BRARP (UBC core domain-containing protein n=11 Tax=Mesangiospermae TaxID=1437183 RepID=M4DID7_BRARP)

HSP 1 Score: 231 bits (589), Expect = 3.220e-76
Identity = 104/125 (83.20%), Postives = 116/125 (92.80%), Query Frame = 0

Query:    1 MSTPARRRLMRDFRRLQNDPPSGVTGAPMDNNILAWQAVIFGPDDTPWEGGTFKLLLEFSEDYPNKPPSVRFLTRMFHPNIYNNGQICLDILQNQWSPIYDICAILTSIQSLLCDPNPASPANSE 125
            MSTPAR+RLMRDFRRLQ DPP+G++GAP DNNIL W AVIFGPDDTPW+GGTFKL L+F+EDYPNKPP+VRF++RMFHPNIY +G ICLDILQNQWSPIYD+ AILTSIQSLLCDPNP SPANSE
Sbjct:    1 MSTPARKRLMRDFRRLQQDPPAGISGAPQDNNILLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSE 125

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig5277.12657.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig5277.12657.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5KW20_9PHAE	6.100e-90	100.00	UBC core domain-containing protein n=5 Tax=Ochroph...	[more]
B8CAB3_THAPS	2.190e-81	91.20	Ubiquitin-conjugating enzyme 1 n=19 Tax=Bacillario...	[more]
A0A7S0FQ92_9STRA	4.960e-81	90.32	Hypothetical protein (Fragment) n=1 Tax=Minutocell...	[more]
K3WSJ4_GLOUD	2.100e-79	88.80	UBC core domain-containing protein n=37 Tax=Oomyco...	[more]
F0WM57_9STRA	9.020e-78	86.40	Ubiquitinconjugating enzyme E2 putative n=1 Tax=Al...	[more]
A0A4D9CYF5_9STRA	9.480e-78	86.40	UBC core domain-containing protein n=2 Tax=Monodop...	[more]
A0A812WBD6_SYMMI	2.220e-77	84.00	UBC2 protein n=1 Tax=Symbiodinium microadriaticum ...	[more]
W7UAM9_9STRA	7.760e-77	86.40	Ubiquitin-conjugating enzyme e2 n=1 Tax=Nannochlor...	[more]
F1C960_PAESU	1.600e-76	83.20	Ubiquitin-conjugating enzyme n=8 Tax=Mesangiosperm...	[more]
M4DID7_BRARP	3.220e-76	83.20	UBC core domain-containing protein n=11 Tax=Mesang...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SMART	SM00212	ubc_7	coord: 7..125 e-value: 2.8E-44 score: 163.1
None	No IPR available	PANTHER	PTHR24067:SF293		coord: 1..125
None	No IPR available	PANTHER	PTHR24067	UBIQUITIN-CONJUGATING ENZYME E2	coord: 1..125
IPR016135	Ubiquitin-conjugating enzyme/RWD-like	GENE3D	3.10.110.10		coord: 1..125 e-value: 7.1E-58 score: 196.4
IPR016135	Ubiquitin-conjugating enzyme/RWD-like	SUPERFAMILY	54495	UBC-like	coord: 1..125
IPR000608	Ubiquitin-conjugating enzyme E2	PFAM	PF00179	UQ_con	coord: 8..125 e-value: 6.2E-46 score: 155.5
IPR000608	Ubiquitin-conjugating enzyme E2	PROSITE	PS50127	UBIQUITIN_CONJUGAT_2	coord: 7..125 score: 43.29
IPR023313	Ubiquitin-conjugating enzyme, active site	PROSITE	PS00183	UBIQUITIN_CONJUGAT_1	coord: 77..92

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig5277	contig	H-paniculata_contig5277:2695..14119 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig5277.12657.1	mRNA_H-paniculata_contig5277.12657.1	Halopteris paniculata Hal_grac_a_UBK monoicous	mRNA	H-paniculata_contig5277 2695..14119 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-paniculata_contig5277.12657.1 ID=prot_H-paniculata_contig5277.12657.1|Name=mRNA_H-paniculata_contig5277.12657.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=125bp
MSTPARRRLMRDFRRLQNDPPSGVTGAPMDNNILAWQAVIFGPDDTPWEG
GTFKLLLEFSEDYPNKPPSVRFLTRMFHPNIYNNGQICLDILQNQWSPIY
DICAILTSIQSLLCDPNPASPANSE

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR016135	UBQ-conjugating_enzyme/RWD
IPR000608	UBQ-conjugat_E2
IPR023313	UBQ-conjugating_AS