mRNA_H-paniculata_contig5271.12649.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig5271.12649.1 vs. uniprot
Match: A0A6H5KQ21_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQ21_9PHAE) HSP 1 Score: 429 bits (1104), Expect = 2.420e-130 Identity = 260/509 (51.08%), Postives = 316/509 (62.08%), Query Frame = 1
Query: 109 GNASSEPRATQAHPKRSQELPRLLAEGAVELKMAVNPPGAHGNVMLPASEAVVEVDDDAQAEQDNPSNEG--AVTWRTGKYYALRLHEIATGQVLAASQKQGIIITYDIWRGHSMVENTLIDVPFDKNGVYFFTVPKFHRTGAFRLVFHAAPAAPLSPAVDTSLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSLSPPVRRTFDIKPLEYTVQVSPRFTHTGAVAALHKLRALQYLRHRNREESEGMSVNLDLPFDCPEVPSLKAGLVTVLNALPRGAFKVGEVTESFAGEDVSDAEGADGHG-PAPAT--GWTPALRDCWQSHVASATTSQELMEAVLLMESCLDIKWLKPWYRGVQQKMPSTSHLLRLSTPAAVALRLFALDRAILYDKVCSTLSRGSRLRSGIQLRERGGEGAFPSTTGRRGSTLSRSSQNGRRATRAVVQPELVKPRGRQTRTSRAAE---DEGTTRSPPRRGRRGSGSRRGGGXXXXXXXSRSRDLSPGSWED 1611
G+A+S+ R A P R+QELPRLLAEG VEL++AVNPPGA NV++P +E VVE D+D +A +D+ NEG +V+W + KYYA+RLH+ +TG+VL SQ+QGI + Y+IWRG +VE T DVPFDKNGVYFFT PKFHRTG FRLVFH PA + ++ F IKPLE+ VQVSPRFT+TGAVAALHKLRA+ YL+ R+REESE + V+LDL FDC E+ LK GL T+LNALP+GAFK G +T E +S+ + PA T GWTP+LR+CW S VASAT Q+LMEA+LL+E CLD KWLKPWYR QQKM S HLLRLSTPAAVALRLFALDRAILYDKV + RGSRLR+GIQLR R + S+ G + +R+ E D+G R PPRRGR + GG SRDLSPGSWE+
Sbjct: 2460 GDAASD-RGVLARPSRNQELPRLLAEGGVELRVAVNPPGASNNVVVPETEVVVEFDNDGEAVEDDARNEGGGSVSW-SKKYYAVRLHDASTGEVLVPSQRQGISVVYEIWRGQQLVEFTPCDVPFDKNGVYFFTAPKFHRTGRFRLVFHVVPAQ------------------------------FYAAPQPGDEGAATAEKKGFKIKPLEFHVQVSPRFTYTGAVAALHKLRAVPYLKQRHREESEAVEVDLDLRFDCDELECLKMGLFTLLNALPKGAFKEGGLTTDEV-EGLSEQQXXXRERLPATTTTSGWTPSLRECWVSQVASATRGQDLMEALLLLELCLDQKWLKPWYRPAQQKMQSAWHLLRLSTPAAVALRLFALDRAILYDKVATRAQRGSRLRNGIQLRGR----SSASSRGGGDTKAARALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGRGDDGRNRKPPRRGRPAKKTSGGG----------SRDLSPGSWEE 2921
BLAST of mRNA_H-paniculata_contig5271.12649.1 vs. uniprot
Match: D8LI13_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI13_ECTSI) HSP 1 Score: 391 bits (1005), Expect = 3.900e-117 Identity = 243/515 (47.18%), Postives = 294/515 (57.09%), Query Frame = 1
Query: 109 GNASSEPRATQAHPKRSQELPRLLAEGAVELKMAVNPPGAHGNVMLPASEAVVEVDDDAQAEQDNPSNEG--AVTWRTGKYYALRLHEIATGQVLAASQKQGIIITYDIWRGHSMVENTLIDVPFDKNGVYFFTVPKFHRTGAFRLVFHAAPAAPLSPAVDTSLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSLSPPVRRTFDIKPLEYTVQVSPRFTHTGAVAALHKLRALQYLRHRNREESEGMSVNLDLPFDCPEVPSLKAGLVTVLNALPRGAFKVGEVTESFAGEDVSDAEGADGHGPAPATGWTPALRDCWQSHVASATTSQELMEAVLLMESCLDIKWLKPWYRGVQQKMPSTSHLLRLSTPAAVALRLFALDRAILYDKVCSTLSRGSRLRSGIQLRERGGEGAFPSTTGRRGSTLSRSSQNGRRATRAVVQPELVKPRGRQTRTS-------------RAAEDEGTTRSPPRRGRRGSGSRRGGGXXXXXXXSRSRDLSPGSWE 1608
G+A+S+ R A P R+QELPRLLAEG VEL++AVNPPGA NV++P +E VVE D+D +A +++ N G +V+W + KY+A+RLH+ +TG+VL SQ+QGI + Y+IWRG +VE T DVPFDKNGVYFFT PKFHRTG FRLVFH PA + + ++ F+IKPLE+ VQVSPRFT+TGAVAALHKLRA+ YL+ R+REESE + V+LDL FDC E L A T +GWTP+LR+CW SHVASAT SQ+LMEA+LL+E CLD KWLKPWYR QQKM S HLLRLSTPAAVALRLFALDRAILYDKV + RGSRLR+GIQLR R S+ S +A RAV D+G +R PPRRGR + GG SRDLSPGSWE
Sbjct: 2053 GDAASD-RGVLARPSRNQELPRLLAEGGVELRVAVNPPGASNNVLVPETEVVVEFDNDGEAVEEDARNGGGGSVSW-SKKYHAVRLHDASTGEVLVPSQRQGISVVYEIWRGQQLVEFTPCDVPFDKNGVYFFTAPKFHRTGRFRLVFHVVPAQ-----------------------------FYAAPQPGDEGAATAEKKKGFNIKPLEFHVQVSPRFTYTGAVAALHKLRAVPYLKQRHREESEAVEVDLDLRFDCDE--GLPAATTT--------------------------------------SGWTPSLRECWVSHVASATRSQDLMEALLLLELCLDQKWLKPWYRPAQQKMQSAWHLLRLSTPAAVALRLFALDRAILYDKVATRAQRGSRLRNGIQLRGR--------------SSASSRGGGDTKAARAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGRGDDGRSRKPPRRGRPAKKTSGGG----------SRDLSPGSWE 2472
BLAST of mRNA_H-paniculata_contig5271.12649.1 vs. uniprot
Match: A0A4D9D954_9STRA (Uncharacterized protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D954_9STRA) HSP 1 Score: 110 bits (275), Expect = 1.480e-21 Identity = 78/196 (39.80%), Postives = 104/196 (53.06%), Query Frame = 1
Query: 715 DIKPLEYTVQVSPRFTHTGAVAALHKLRALQYLR-HRNREESEGMSVNLDLPFDCPEVPSLKAGLVTVLNALPRGAF-----KVGEVTESFAGEDVSDAEGADGH-GP--APATGWTPALRDCWQSHVASATTSQELMEAVLLMESCLDIKWLKPWYRGVQQKMPSTS-HLLRL-STPAAVALRLFALDRAILYDK 1269
+IKPL V+V R T + L+ L +L R S SV LD+P D EV L+ L+ + LP GA +G G ++ DG GP AP WT AL+ W +H+ A T E+ME +LL+ESCL +WLKPW+ +++ +TS HLLRL +T AA A LF LD+AILYDK
Sbjct: 1761 EIKPLCLRVEVRARRAATSVRSVLNS--HLSFLNISRGGRYSLRQSVELDIPEDADEVVGLRIALLQLKETLPNGALLESPEDLGGSIAHLGGGGSTNIHAGDGEVGPVRAPVCYWTEALQAQWINHLMEAETPHEVMEGLLLLESCLHPEWLKPWFHPLRRSYAATSSHLLRLGTTAAAAAFHLFILDKAILYDK 1954
BLAST of mRNA_H-paniculata_contig5271.12649.1 vs. uniprot
Match: A0A7R9U4T2_9STRA (Hypothetical protein n=2 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U4T2_9STRA) HSP 1 Score: 85.5 bits (210), Expect = 1.310e-13 Identity = 61/173 (35.26%), Postives = 90/173 (52.02%), Query Frame = 1
Query: 769 GAVAALHKLRALQYLRHRNREESEGMSVNLDLPFDCP-----EVPSLKAGLVTVLNALPRGAFKVGEVTESFAGEDVSDAEGADGHGPAPATGWTPALRDCWQSHVASATTSQELMEAVLLMESCLDIKWLKPWYRGVQQKMPSTSHLLRLSTPAAVALRLFALDRAILYDKV 1272
G++A LRAL+ + +++ V P P +V SLK G++TV ALPRG+ D EG G+ ++R+ W+SHV S+ T QEL EAV+++ES L W+ +G S ++ LR++TP AVALRLFALD+ + YDK+
Sbjct: 1607 GSLALKSSLRALE-VAEQDKYALNRALVGAQRPSLTPGIIQKDVESLKTGILTVAAALPRGSL---------------DEEGH---------GFVESVREAWESHVLSSETVQELSEAVVILESFLQKAWIG---KGSGTVSSSAAYFLRIATPGAVALRLFALDQLVRYDKL 1751
BLAST of mRNA_H-paniculata_contig5271.12649.1 vs. uniprot
Match: A0A7S4DIA8_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DIA8_HETAK) HSP 1 Score: 79.0 bits (193), Expect = 1.510e-12 Identity = 62/234 (26.50%), Postives = 106/234 (45.30%), Query Frame = 1
Query: 241 MLPASEAVVEVDDDAQAEQDNPSNEGAVTWRTGKYYALRLHEIATGQVLAASQKQGIIITYDIWRGHSMVENTLIDVPFDKNGVYFFTVPKFHRTGAFRLVFHAAPAAPLSPAVDTSLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSLSPPVRRTFDIKPLEYTVQVSPRFTHTGAVAALHKLRALQYLRHRNREESEGMSVNLDLPFDCPEVPSLKAGLVTVLNALPRGAF 942
++P+ E E +DD + + +G ++++ YYA L + G+++ + Q + +I+ G +V N++ P++ +G ++F+ F R+G FRL F P + +D D++P Y V+V+P + TGA AAL +L A +L RNR + V+LDLP P +L+AGL+ V ALP+GA
Sbjct: 102 VMPSPEVTAEFEDD-DXDDVEITEDGYFSFKSNVYYAAALVD-GNGKIVKVPKAQ---LVSEIYLGQELV-NSVPASPWEDDGAFYFSEVVFRRSGRFRLRFTLRPGH--TGGLDEK-----------------------------------------DVEPFTYEVKVTPSYAKTGAAAALGRLEARAHLGARNRAFRHPLPVDLDLPAGAPPCAALRAGLLAVAAALPKGAL 286
BLAST of mRNA_H-paniculata_contig5271.12649.1 vs. uniprot
Match: A0A7S0SWC1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SWC1_9STRA) HSP 1 Score: 80.5 bits (197), Expect = 2.360e-12 Identity = 55/191 (28.80%), Postives = 102/191 (53.40%), Query Frame = 1
Query: 715 DIKPLEYTVQVSPRFTHTGAVAALHKLRALQYLRHRNRE---ESEGMSVNLDLPFDCPEVPSLKAGLVTVLNALPRGAFKV--GEVTESFAGEDVSDAEGADGHGPAPATGWTPALRDCWQSHVASATTSQELMEAVLLMESCLDIKWLKPWYRGVQQKMPSTSHLLRLSTPAAVALRLFALDRAILYDKV 1272
+IKPL + VQV + G++ A+++L AL+Y + NR+ + LD + E +L+ ++T+ ALP G+ E +++ + ++V+ A A + W+ L W+ + S T+ LME +LL+ES + +WL + +P + ++ + +++ALRLF LD+AILY+K+
Sbjct: 212 NIKPLVFNVQVEAKNVLCGSIHAIYQLNALKYYNYANRQINMNRNDLKTLLDDITNESEFKALQISILTLYAALPLGSLPTVDDENSKNSSLDEVNIANLI-----AESNNWSDILDQTWRGLIHSTTSLTILMECLLLLESFISKQWLHASNVKLLNALPLPHYAMKSISLSSIALRLFCLDKAILYEKL 397
BLAST of mRNA_H-paniculata_contig5271.12649.1 vs. uniprot
Match: A0A7S0FNT1_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0FNT1_9STRA) HSP 1 Score: 59.7 bits (143), Expect = 1.090e-6 Identity = 55/209 (26.32%), Postives = 88/209 (42.11%), Query Frame = 1
Query: 718 IKPLEYTVQVSPRFTHT-------GAVAALHKLRALQYLRHRNREE--------SEGMSVNLDLPFDCPEVPSLKAGLVTVLNALPRGAFKVGEVTESFAGEDVSDAEGADGHGPAPATGWTPALRDCWQSHVASATTSQELMEAVLLMESCLDIKWLKPWYRGVQQKMPSTSHLLRLSTPAAVALRLFALDRAILYDKVCSTLSRGSR 1299
++P EY ++V G ++L + A +YL NRE S+ +SV + + LKAGL+ + ALPRG+ ++ WT + W+S V +AT LM ++L++E+ + P + Q + + ++ +VALRL LDRAI +D V ST RG R
Sbjct: 2 VEPSEYNIEVQTELLDEYFDTRGDGVPSSLEGMVAAKYLNSANRERGSAPVPNFSDAISVGPGATIEDESIGKLKAGLLLIEAALPRGSID--------------------------SSVWTSEKANSWRSMVCNATGPGSLMGSLLVLETSILADLFYPQGYYLLQCLQTPWRAQNSASTVSVALRLSTLDRAIKFD-VGSTSGRGGR 183 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5271.12649.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 7
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig5271.12649.1 >prot_H-paniculata_contig5271.12649.1 ID=prot_H-paniculata_contig5271.12649.1|Name=mRNA_H-paniculata_contig5271.12649.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=538bp RQGEEDGEGEGEEAEDVKKDKGGDGGGGGGRRRGRGGNASSEPRATQAHPback to top mRNA from alignment at H-paniculata_contig5271:1614..8686+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig5271.12649.1 ID=mRNA_H-paniculata_contig5271.12649.1|Name=mRNA_H-paniculata_contig5271.12649.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=7073bp|location=Sequence derived from alignment at H-paniculata_contig5271:1614..8686+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig5271:1614..8686+ >mRNA_H-paniculata_contig5271.12649.1 ID=mRNA_H-paniculata_contig5271.12649.1|Name=mRNA_H-paniculata_contig5271.12649.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3228bp|location=Sequence derived from alignment at H-paniculata_contig5271:1614..8686+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |