prot_H-paniculata_contig5271.12650.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-paniculata_contig5271.12650.1
Unique Name	prot_H-paniculata_contig5271.12650.1
Type	polypeptide
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length	520

Homology

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BLAST of mRNA_H-paniculata_contig5271.12650.1 vs. uniprot
Match: D8LI13_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI13_ECTSI)

HSP 1 Score: 144 bits (363), Expect = 1.010e-32
Identity = 69/118 (58.47%), Postives = 86/118 (72.88%), Query Frame = 0

Query:  366 PLGIKEELARGAIREEGLPDEVRSFRGRVRKAIGRIAPQGFALHFVEPVDLQAYPDYVHLVSEPMDLSTILMKLRSGDYDSPEGRKRLVRDVNLIPENCETFNGQRVLISENAHLVAQ 483
            P+ +K+EL RG   EE LP +VR FR  VR A+   + + F LHF + VDL AYP Y  +V EPMDL+ IL KLR G+YDS EGRK L+RD+NLIPENCETFNG+ V IS+NAH +A+
Sbjct: 2712 PVPLKDELRRGVAEEEVLPGDVREFRRVVRSAVKGFSKEAFTLHFRDAVDLVAYPQYTDIVKEPMDLARILFKLRQGEYDSQEGRKLLLRDINLIPENCETFNGKGVQISQNAHQLAR 2829

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BLAST of mRNA_H-paniculata_contig5271.12650.1 vs. uniprot
Match: A0A6H5KQ21_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQ21_9PHAE)

HSP 1 Score: 137 bits (346), Expect = 1.520e-30
Identity = 67/118 (56.78%), Postives = 85/118 (72.03%), Query Frame = 0

Query:  366 PLGIKEELARGAIREEGLPDEVRSFRGRVRKAIGRIAPQGFALHFVEPVDLQAYPDYVHLVSEPMDLSTILMKLRSGDYDSPEGRKRLVRDVNLIPENCETFNGQRVLISENAHLVAQ 483
            PL +K+EL RG   E  L  +VR FR  VR A+ R + + + LHF + VDL AYP Y  +V EPMDL+ IL KLR G+YDS EGRK L+RD+NLIP+NCETFNG+ V IS+NAH +A+
Sbjct: 3128 PLPLKDELRRGVAEEVVLLCDVREFRRVVRSAVKRSSKEAYTLHFRDAVDLVAYPQYTDIVKEPMDLARILFKLRQGEYDSQEGRKLLLRDINLIPQNCETFNGKGVQISQNAHQLAR 3245

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BLAST of mRNA_H-paniculata_contig5271.12650.1 vs. uniprot
Match: A0A7S2SEX9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SEX9_9STRA)

HSP 1 Score: 70.1 bits (170), Expect = 1.590e-10
Identity = 38/79 (48.10%), Postives = 49/79 (62.03%), Query Frame = 0

Query:  392 GRVRKAIGRIAPQGF--ALHFVEPVDLQAYPDYVHLVSEPMDLSTILMKLRSGDYDSPEGRKRLVRDVNLIPENCETFN 468
            G VR+ +    PQG   A  F+ PVDL+AYPDY+ ++ EPMDLSTI  K+  G Y S E  KR   DVNL+ +N   +N
Sbjct:   71 GLVRQLLAHTLPQGIKTATPFLNPVDLEAYPDYLKVIKEPMDLSTIRRKVEKGTYLSLEVFKR---DVNLVFDNALRYN 146

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BLAST of mRNA_H-paniculata_contig5271.12650.1 vs. uniprot
Match: G4ZZM5_PHYSP (Uncharacterized protein n=7 Tax=Phytophthora TaxID=4783 RepID=G4ZZM5_PHYSP)

HSP 1 Score: 69.3 bits (168), Expect = 1.450e-8
Identity = 39/103 (37.86%), Postives = 55/103 (53.40%), Query Frame = 0

Query:  389 SFRGRVRKAIGRIAPQGFALHFVEPVDLQAYPDYVHLVSEPMDLSTILMKLRSGDYDSPEGRKRLVRDVNLIPENCETFNGQRVLISENAHLVAQTFHNLFNE 491
            + R R+   +  +     AL F  PV++   P Y  L+  PMDL TI ++L  G YD  +  + LVRDVNL+ ENC TFN     IS  A+ +   F+ LF +
Sbjct: 3005 TLRSRLEYIMDTLLRNELALAFSAPVNVNEVPGYAELIKHPMDLGTIKIRLSRGFYD--QRFEMLVRDVNLVWENCFTFNRLDADISAGANRLRSIFNRLFEQ 3105

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BLAST of mRNA_H-paniculata_contig5271.12650.1 vs. uniprot
Match: A0A1E7EUT7_9STRA (Bromodomain-containing protein (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7EUT7_9STRA)

HSP 1 Score: 61.6 bits (148), Expect = 2.300e-8
Identity = 30/71 (42.25%), Postives = 41/71 (57.75%), Query Frame = 0

Query:  398 IGRIAPQGFALHFVEPVDLQAYPDYVHLVSEPMDLSTILMKLRSGDYDSPEGRKRLVRDVNLIPENCETFN 468
            + R+A  GFA  F+EPV+L  +PDY   +  PMDL T+  KL S  Y  PE   +  RD+  I  NC+ +N
Sbjct:    3 VDRLAQDGFANIFLEPVNLDDFPDYEESIDIPMDLGTVRTKLLSKKYQMPE---QFARDMRKIWNNCKIYN 70

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BLAST of mRNA_H-paniculata_contig5271.12650.1 vs. uniprot
Match: C5KHK5_PERM5 (Histone acetyltransferase n=2 Tax=Perkinsus marinus (strain ATCC 50983 / TXsc) TaxID=423536 RepID=C5KHK5_PERM5)

HSP 1 Score: 66.2 bits (160), Expect = 3.160e-8
Identity = 33/93 (35.48%), Postives = 57/93 (61.29%), Query Frame = 0

Query:  389 SFRGRVRKAIGRIAPQGFALHFVEPVDLQAYPDYVHLVSEPMDLSTILMKLRSGDYDSPEGRKRLVRDVNLIPENCETFNGQRVLISENAHLV 481
            + +G++   I  ++ + FA  F EPV L+  P+Y  ++++PMDL T+  K  SG Y +   R++ + DV+L+ +NC TFNG+    +E A+ V
Sbjct:  185 TLQGQMSAIITSVSKKPFAWPFREPVSLREAPNYYEIITKPMDLQTMKNKCDSGQYQT---REQFIADVDLMRDNCITFNGRNSEYTERANEV 274

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BLAST of mRNA_H-paniculata_contig5271.12650.1 vs. uniprot
Match: A0A6A3NCP1_9STRA (Uncharacterized protein n=1 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A3NCP1_9STRA)

HSP 1 Score: 67.0 bits (162), Expect = 7.100e-8
Identity = 38/103 (36.89%), Postives = 54/103 (52.43%), Query Frame = 0

Query:  389 SFRGRVRKAIGRIAPQGFALHFVEPVDLQAYPDYVHLVSEPMDLSTILMKLRSGDYDSPEGRKRLVRDVNLIPENCETFNGQRVLISENAHLVAQTFHNLFNE 491
            + R R+   +  +     AL F  PV++   P Y  L+  PMDL TI ++L  G YD  +  + LVRDVNL+ ENC  FN     IS  A+ +   F+ LF +
Sbjct: 1664 TLRSRLEYIMDTLLRNELALAFSAPVNVNEVPGYADLIKHPMDLGTIKIRLSRGFYD--QQFEMLVRDVNLVWENCFAFNRLDADISAGANRLRSIFNRLFEQ 1764

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BLAST of mRNA_H-paniculata_contig5271.12650.1 vs. uniprot
Match: A0A6G0SF06_9STRA (Cation-transporting ATPase n=1 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6G0SF06_9STRA)

HSP 1 Score: 67.0 bits (162), Expect = 7.820e-8
Identity = 38/103 (36.89%), Postives = 54/103 (52.43%), Query Frame = 0

Query:  389 SFRGRVRKAIGRIAPQGFALHFVEPVDLQAYPDYVHLVSEPMDLSTILMKLRSGDYDSPEGRKRLVRDVNLIPENCETFNGQRVLISENAHLVAQTFHNLFNE 491
            + R R+   +  +     AL F  PV++   P Y  L+  PMDL TI ++L  G YD  +  + LVRDVNL+ ENC  FN     IS  A+ +   F+ LF +
Sbjct: 3419 TLRSRLEYIMDTLLRNELALAFSAPVNVNEVPGYADLIKHPMDLGTIKIRLSRGFYD--QRFEMLVRDVNLVWENCFAFNRLDADISAGANRLRSIFNRLFEQ 3519

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BLAST of mRNA_H-paniculata_contig5271.12650.1 vs. uniprot
Match: A0A1I7ZP97_9BILA (Uncharacterized protein n=1 Tax=Steinernema glaseri TaxID=37863 RepID=A0A1I7ZP97_9BILA)

HSP 1 Score: 66.2 bits (160), Expect = 9.110e-8
Identity = 39/130 (30.00%), Postives = 68/130 (52.31%), Query Frame = 0

Query:  369 IKEELARGAIREEGLPDEVRSFRGRVRKAIGRIAPQGFALHFVEPVDLQAYPDYVHLVSEPMDLSTILMKLRSGDYDSPEGRKRLVRDVNLIPENCETFNGQRVLISENAHLVAQTFHNLFNESEREMLS 498
            I E +     R++G   EV     +V   +     +  +  F +PVDL+  PDY   V+EPMDL T++ K+++ DY+S +    ++ D  LI  NC T+NG+   I++ A  +    ++ F+  + E +S
Sbjct:  556 IAEAVIHNLRRKQGTSKEVMK---KVETILREALRREDSWPFSQPVDLKEVPDYREYVTEPMDLRTMMNKMKNNDYESLDS---VIADYQLIFSNCRTYNGEDSEITDMARTLEVYMNDQFDALKAESMS 679

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BLAST of mRNA_H-paniculata_contig5271.12650.1 vs. uniprot
Match: A0A3M6VF47_9STRA (Uncharacterized protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VF47_9STRA)

HSP 1 Score: 66.6 bits (161), Expect = 1.010e-7
Identity = 33/80 (41.25%), Postives = 48/80 (60.00%), Query Frame = 0

Query:  389 SFRGRVRKAIGRIAPQGFALHFVEPVDLQAYPDYVHLVSEPMDLSTILMKLRSGDYDSPEGRKRLVRDVNLIPENCETFN 468
            + R R+   +  ++  G AL F+ PV+++  P Y  L+  PMDL TI  +L  G YD  +  + LV+DVNL+ ENC TFN
Sbjct: 3380 TLRSRLEHVLDMVSRNGLALAFLAPVNVKDVPGYADLIKHPMDLGTIRSRLSRGFYD--QRFEMLVQDVNLVWENCFTFN 3457

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig5271.12650.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig5271.12650.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D8LI13_ECTSI	1.010e-32	58.47	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5KQ21_9PHAE	1.520e-30	56.78	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A7S2SEX9_9STRA	1.590e-10	48.10	Hypothetical protein (Fragment) n=1 Tax=Rhizochrom...	[more]
G4ZZM5_PHYSP	1.450e-8	37.86	Uncharacterized protein n=7 Tax=Phytophthora TaxID...	[more]
A0A1E7EUT7_9STRA	2.300e-8	42.25	Bromodomain-containing protein (Fragment) n=1 Tax=...	[more]
C5KHK5_PERM5	3.160e-8	35.48	Histone acetyltransferase n=2 Tax=Perkinsus marinu...	[more]
A0A6A3NCP1_9STRA	7.100e-8	36.89	Uncharacterized protein n=1 Tax=Phytophthora rubi ...	[more]
A0A6G0SF06_9STRA	7.820e-8	36.89	Cation-transporting ATPase n=1 Tax=Phytophthora fr...	[more]
A0A1I7ZP97_9BILA	9.110e-8	30.00	Uncharacterized protein n=1 Tax=Steinernema glaser...	[more]
A0A3M6VF47_9STRA	1.010e-7	41.25	Uncharacterized protein n=2 Tax=Peronospora effusa...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001487	Bromodomain	PRINTS	PR00503	BROMODOMAIN	coord: 456..475 score: 30.87 coord: 405..418 score: 31.21 coord: 419..435 score: 47.44
IPR001487	Bromodomain	SMART	SM00297	bromo_6	coord: 205..494 e-value: 5.1E-14 score: 62.6
IPR001487	Bromodomain	PFAM	PF00439	Bromodomain	coord: 406..477 e-value: 1.1E-12 score: 47.8
IPR001487	Bromodomain	PROSITE	PS50014	BROMODOMAIN_2	coord: 402..475 score: 16.142
None	No IPR available	GENE3D	2.20.28.140		coord: 152..206 e-value: 1.7E-8 score: 36.1
None	No IPR available	PANTHER	PTHR22881:SF11	SWI/SNF NUCLEOSOME REMODELING COMPLEX COMPONENT	coord: 208..471
None	No IPR available	PANTHER	PTHR22881	BROMODOMAIN CONTAINING PROTEIN	coord: 208..471
IPR036427	Bromodomain-like superfamily	GENE3D	1.20.920.10		coord: 384..504 e-value: 6.7E-21 score: 76.3
IPR036427	Bromodomain-like superfamily	SUPERFAMILY	47370	Bromodomain	coord: 389..495
IPR001876	Zinc finger, RanBP2-type	PROSITE	PS01358	ZF_RANBP2_1	coord: 157..176
IPR001876	Zinc finger, RanBP2-type	PROSITE	PS50199	ZF_RANBP2_2	coord: 150..182 score: 8.377
IPR036443	Zinc finger, RanBP2-type superfamily	SUPERFAMILY	90209	Ran binding protein zinc finger-like	coord: 154..180

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig5271	contig	H-paniculata_contig5271:8773..10720 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig5271.12650.1	mRNA_H-paniculata_contig5271.12650.1	Halopteris paniculata Hal_grac_a_UBK monoicous	mRNA	H-paniculata_contig5271 8773..10721 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-paniculata_contig5271.12650.1 ID=prot_H-paniculata_contig5271.12650.1|Name=mRNA_H-paniculata_contig5271.12650.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=520bp
EEEDDVRGVARGGRGSAAMGAGGGRRGSSAIGAAGRRRKREDVNYREDES
EADDGAEEDTSFSGGGGHSLARDVGGGGGGRHVSSTASAVPMTIADRRRS
SNISKKRQKISGSSSRPSSADSGSVVDDRSLGGGGVSEDGSAVGGEGDGG
AGVHANWVCYQCTFVNALTDEKCDVCGHTRPRSAAAAAAVAVAAAAAEAA
ASPVEAVAAVAANSSGETRKRRRQQHVPSSTAAGIDDDDDDGGASSGEED
DYGVSDNNGNSRGSAPQRGRGRGRPRSSVAASSKSSKNRGRTAGAVGSAG
RAVSGTDASSRQRRKVPRVDYNEEHHERDEEDEDASSVSNKRKSKGAGSG
RAARAAAGQAGKQRRPLGIKEELARGAIREEGLPDEVRSFRGRVRKAIGR
IAPQGFALHFVEPVDLQAYPDYVHLVSEPMDLSTILMKLRSGDYDSPEGR
KRLVRDVNLIPENCETFNGQRVLISENAHLVAQTFHNLFNESEREMLSVI
GATAAAASATLMGTGGGGRV

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001487	Bromodomain
IPR036427	Bromodomain-like_sf
IPR001876	Znf_RanBP2
IPR036443	Znf_RanBP2_sf