mRNA_H-paniculata_contig527.12647.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig527.12647.1
Unique NamemRNA_H-paniculata_contig527.12647.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig527.12647.1 vs. uniprot
Match: D8LNP5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNP5_ECTSI)

HSP 1 Score: 176 bits (445), Expect = 4.310e-49
Identity = 99/182 (54.40%), Postives = 126/182 (69.23%), Query Frame = 3 
Query:  450 GARGERAATSAIESRVQHKVLQLDN-GCAQEGAQSASARAARAAGRIRQ-DLSGKQYQKKGLGSLKAERGRIPSFRDLVGVHDLWKSYVARLQVTSKNAKTLEQLVLGADLQGSYLTVSRSSVPSMVGLAGILLRETANTFQIVTPKEKARTIPKRGCAFRLAIGNRIITLSGAALEGRRGG 989
            G RG R  T+A+ S+++ KV+ LDN    Q  AQSA ARA R AGR  +  LSGK+ ++ GL +L+A  G    FRDL+G+H +WK+Y ARL     + K L+Q +L ADLQG YLTVSR+S  S+V +AGI+LRE ANTFQ+VTP  K  TIPKR CA RLA  +R++TL G AL GRRGG
Sbjct:    4 GTRGHRETTAALASKLEGKVVYLDNFASGQTEAQSAGARAERQAGRATKLGLSGKRCKQMGLNALEARNGGSIPFRDLLGLHGVWKNYAARLVSKCPSQKVLQQRILSADLQGCYLTVSRASASSLVNVAGIVLREAANTFQLVTPAGKTLTIPKRSCAVRLAFADRVVTLDGGALMGRRGG 185
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BLAST of mRNA_H-paniculata_contig527.12647.1 vs. uniprot
Match: A0A6H5K6H7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6H7_9PHAE)

HSP 1 Score: 186 bits (471), Expect = 1.370e-47
Identity = 118/237 (49.79%), Postives = 157/237 (66.24%), Query Frame = 3 
Query:  312 MYIRMLPELLPPHLRA----PPAGARSDAK---PGVVGAASAARFTEFVRGLLGA-RGERAATSAIESRVQHKVLQLDN-GCAQEGAQSASARAARAAGRI-RQDLSGKQYQKKGLGSLKAERG-RIPSFRDLVGVHDLWKSYVARLQVTSKNAKTLEQLVLGADLQGSYLTVSRSSVPSMVGLAGILLRETANTFQIVTPKEKARTIPKRGCAFRLAIGNRIITLSGAALEGRRGG 989
            MY R+ P LLP  LRA    P +G  + ++        AAS  RF++ VRG++G  RG R  T+AI S+++ KV+ LD+    Q   Q+A ARA R AGR  ++ LSGK+ ++ GL +L+A  G RIP FRDL+G+H +WK+Y ARL     + K L+Q  L A+LQG YLTVSR+SV S+V +AGI+LRET N FQ+VTP  K  TIPKR CA RLA G+R++T +G  L GRRGG
Sbjct: 1067 MYARLPPALLPTGLRAALSTPQSGGSTPSRRHSSSTAAAASLDRFSDLVRGMVGGTRGHRKTTAAIASKLEGKVVYLDSLASGQTETQTAGARAERQAGRATKRGLSGKRCKQMGLNALEARNGGRIP-FRDLLGLHGVWKNYAARLVSKCSSQKILQQRTLSAELQGCYLTVSRASVSSLVNVAGIVLRETVNIFQLVTPAGKMLTIPKRSCAVRLAFGDRMVTRNGGTLMGRRGG 1302
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BLAST of mRNA_H-paniculata_contig527.12647.1 vs. uniprot
Match: UPI001263B5F2 (uncharacterized protein LOC116129449 isoform X1 n=2 Tax=Pistacia vera TaxID=55513 RepID=UPI001263B5F2)

HSP 1 Score: 84.7 bits (208), Expect = 1.400e-14
Identity = 51/134 (38.06%), Postives = 77/134 (57.46%), Query Frame = 3 
Query:  582 RIRQDLSGKQYQKKGLGSLKAERGRIPSFRDLVGVHDLWKSYVARL-QVTSKNAKTLEQLVLGADLQGSYLTVSRSSVPSMVGLAGILLRETANTFQIVTPKEKARTIPKRGCAFRLAIGNRIITLSGAALEGR 980
            R ++ +S KQ +K GL  L  E  R  +++ +   H++WK YV +L + T KN   L Q +L ADL G+ + V+   + +  G++GI++RETA TF IVT  +K R +PK+G  F   +    ITL G  L  R
Sbjct:  177 RSKKHMSMKQLKKSGLFDLPQELQRFETYKPM---HEMWKGYVLQLIKTTGKNQ--LAQCLLSADLHGAIILVAECKIAAFTGVSGIMVRETAETFGIVTRDDKFRVVPKKGSVFVFQVDCWKITLLGDKLTSR 305
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BLAST of mRNA_H-paniculata_contig527.12647.1 vs. uniprot
Match: UPI001CFB55D0 (uncharacterized protein LOC123201262 n=1 Tax=Mangifera indica TaxID=29780 RepID=UPI001CFB55D0)

HSP 1 Score: 84.3 bits (207), Expect = 1.900e-14
Identity = 52/137 (37.96%), Postives = 78/137 (56.93%), Query Frame = 3 
Query:  582 RIRQDLSGKQYQKKGLGSLKAERGRIPSFRDLVGVHDLWKSYVARL-QVTSKNAKTLEQLVLGADLQGSYLTVSRSSVPSMVGLAGILLRETANTFQIVTPKEKARTIPKRGCAFRLAIGNRIITLSGAALEGRRGG 989
            R ++ +S KQ +K GL  L  E  R  +F  +   H++WK+YV +L + T KN   L Q +L ADL G+ + V+   + +  G++GI++RETA TF IVT ++K R +PK+   F   +    ITL G  L  R  G
Sbjct:  177 RSKKHMSMKQLKKSGLFDLPKELQRFETFNPM---HEMWKAYVLQLIKTTGKNQ--LAQCLLSADLHGALILVAECKIAAFTGVSGIMVRETAETFGIVTREDKFRVVPKKDSVFIFQVDCWKITLLGNKLTSRNVG 308
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BLAST of mRNA_H-paniculata_contig527.12647.1 vs. uniprot
Match: A0A7J6WT79_THATH (Ribonuclease p protein subunit p29 n=1 Tax=Thalictrum thalictroides TaxID=46969 RepID=A0A7J6WT79_THATH)

HSP 1 Score: 83.2 bits (204), Expect = 4.810e-14
Identity = 52/136 (38.24%), Postives = 72/136 (52.94%), Query Frame = 3 
Query:  582 RIRQDLSGKQYQKKGLGSLKAERGRIPSFRDLVGVHDLWKSYVARLQVTSKNAKTLEQLVLGADLQGSYLTVSRSSVPSMVGLAGILLRETANTFQIVTPKEKARTIPKRGCAFRLAIGNRIITLSGAALEGRRGG 989
            R R+ +S KQ++K G     AE  +   F  +   H++WKSYV +L  +  + K + Q +L ADL G+ L V    + S  G+ GI++RETA TF I+T   K R +PKR   F L      ITL G  L  R  G
Sbjct:  179 RCRKHMSTKQHRKSGSLDFPAEIHKFDIFEPM---HEMWKSYVLKLIGSLGDMKKIAQRLLSADLHGAILRVVECKLISYTGVTGIMVRETAETFGIITRDNKFRVVPKRASVFMLQAHCWKITLCGDQLTSRNYG 311
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BLAST of mRNA_H-paniculata_contig527.12647.1 vs. uniprot
Match: A0A1Y1IMU1_KLENI (Ribonuclease P family protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IMU1_KLENI)

HSP 1 Score: 82.0 bits (201), Expect = 7.790e-14
Identity = 47/160 (29.38%), Postives = 89/160 (55.62%), Query Frame = 3 
Query:  483 IESRVQHKVLQLDNGCAQEGAQSASARAARAAGRIRQDLSGKQYQKKGLGSLKAERGRIPSFRDLVGVHDLWKSYVARLQVTSKNAKTLEQLVLGADLQGSYLTVSRSSVPSMVGLAGILLRETANTFQIVTPKEKARTIPKRGCAFRLAIGNRIITLSG 962
            I +RV+ K++ LDN    +  +   A++     R  + +S +++++ G   +  E  R   +  L  +   W+ Y+ +L       + L   +L AD  G++L+VS S  P+ +G  G+++RET NTFQ+VT + + + +PKRG  F++ +GN +++L G
Sbjct:   98 ISTRVKDKIVLLDNPALGKSRRDRDAQSRTV--RCLKHMSLREHRRNGTFKIPPELQRFELYEPLQAI---WQEYILKL-TQGCGGQALMSRLLTADYHGAFLSVSASKDPTYIGTEGLIVRETQNTFQMVTTQNRLQVVPKRGSIFQMKLGNNLVSLFG 251
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BLAST of mRNA_H-paniculata_contig527.12647.1 vs. uniprot
Match: A0A261XWW2_9FUNG (Uncharacterized protein n=1 Tax=Bifiguratus adelaidae TaxID=1938954 RepID=A0A261XWW2_9FUNG)

HSP 1 Score: 80.1 bits (196), Expect = 1.620e-13
Identity = 56/190 (29.47%), Postives = 91/190 (47.89%), Query Frame = 3 
Query:  432 FVRGLLGARGERAATSAIESRVQHKVLQLDNGCAQEGAQSASARAARAAGRIRQDLSGKQYQKKGLGSLKAERGRIPSFRD-------LVGVHDLWKSYVARLQVTSKNAKTLEQLVLGADLQGSYLTVSRSSVPSMVGLAGILLRETANTFQIVTPKEKARTIPKRGCAFRLAIGNRIITLSGAALEGR 980
            FV  L+ + G+   T   +++V+ KVL LDN     G                +D S + +Q+K L + +    +I  F          + +H LW  Y+  L     N       +L AD  G+ +TV+RS  PS VG+ GI+++ET NTF+I+TP++K + IPK    F   + ++  T+ G  +  R
Sbjct:   42 FVTSLIPSEGQPQRT--YDTKVKGKVLSLDNPTKPTG----------------KDKSRRTHQRKKLTAKEKRELKIYDFPQESRKYEIFLPLHQLWLGYMEELLGQGSNDAAFLPKLLKADYHGAMMTVTRSKCPSFVGVNGIMIQETENTFKIITPQDKLKVIPKVANVFSFKLRDKTYTIYGNQIRYR 213
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BLAST of mRNA_H-paniculata_contig527.12647.1 vs. uniprot
Match: UPI0010AA45EA (uncharacterized protein LOC103433315 isoform X1 n=4 Tax=Malus domestica TaxID=3750 RepID=UPI0010AA45EA)

HSP 1 Score: 81.6 bits (200), Expect = 1.630e-13
Identity = 51/137 (37.23%), Postives = 77/137 (56.20%), Query Frame = 3 
Query:  582 RIRQDLSGKQYQKKGLGSLKAERGRIPSFRDLVGVHDLWKSYVARL-QVTSKNAKTLEQLVLGADLQGSYLTVSRSSVPSMVGLAGILLRETANTFQIVTPKEKARTIPKRGCAFRLAIGNRIITLSGAALEGRRGG 989
            R ++++S KQ +KKGL     +     SF +   +H++WK Y+ +L + T KN   L Q +L ADL G+ ++V+   V S  G++GI++RETA TF I+T  +K R +PK    F   +    ITL G  L  R  G
Sbjct:  180 RSKKNMSMKQQKKKGLFDFPKD---FHSFDEFKSMHEMWKGYIMQLLKSTGKNQ--LAQFLLSADLHGAIISVAECKVTSDTGVSGIMIRETAETFGIITQDDKFRVVPKMFSVFIFQVDCWKITLHGDKLTSRNLG 311
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BLAST of mRNA_H-paniculata_contig527.12647.1 vs. uniprot
Match: L8GQK2_ACACA (Ribonuclease, putative n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GQK2_ACACA)

HSP 1 Score: 78.6 bits (192), Expect = 1.670e-13
Identity = 42/122 (34.43%), Postives = 68/122 (55.74%), Query Frame = 3 
Query:  597 LSGKQYQKKGLGSLKAERGRIPSFRDLVGVHDLWKSYVARLQVTSKNAKTLEQLVLGADLQGSYLTVSRSSVPSMVGLAGILLRETANTFQIVTPKEKARTIPKRGCAFRLAIGNRIITLSG 962
            +  K+ ++K +  +  E  +   +   V +H +WK Y+  L V +     L   +L ADL G  L V+RS  PS++GL GI+L ET  TFQI+TP+ + R +PK    F   + ++++TL G
Sbjct:   31 MKAKEQREKNMFKIPEEARKYEMY---VPLHAMWKEYIDSL-VGNATGAPLTAKLLKADLHGCCLKVTRSKCPSLIGLEGIVLLETEQTFQIITPQNQLRVVPKANNVFTFVVSSQVVTLYG 148
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BLAST of mRNA_H-paniculata_contig527.12647.1 vs. uniprot
Match: A0A7I4C8P0_PHYPA (Uncharacterized protein n=3 Tax=Physcomitrium patens TaxID=3218 RepID=A0A7I4C8P0_PHYPA)

HSP 1 Score: 80.9 bits (198), Expect = 1.800e-13
Identity = 59/169 (34.91%), Postives = 86/169 (50.89%), Query Frame = 3 
Query:  483 IESRVQHKVLQLDNGCAQEGA-QSASARAARAAG-RIRQDLSGKQYQKKGLGSLKAERGRIPSFRDLVGVHDLWKSYVARLQVTSKNAKTLEQLVLGADLQGSYLTVSRSSVPSMVGLAGILLRETANTFQIVTPKEKARTIPKRGCAFRLAIGNRIITLSGAALEGRR 983
            I++R+  +   LDN     GA + A  RA RA   R  +  S +Q++  G   L A   R   +   + +H++W+ Y   L V   N   L   +L ADL G+ L V  S      G+ GI++RET NTF I+TP++K R +PK G  F L + +  ITL G  L  R+
Sbjct:  100 IDNRLMDRPYLLDNPATHGGAVERAKDRALRARSKRSAKHFSLRQHRLAGSYDLFA---RYHKYDLYLPMHEMWEEYAKSLLVGECNDSKLRPRLLAADLHGAILAVVESKDTYYAGIQGIMIRETDNTFGIITPQDKFRVVPKSGSVFMLQLDSLRITLFGNNLSSRQ 265
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig527.12647.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LNP5_ECTSI4.310e-4954.40Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K6H7_9PHAE1.370e-4749.79Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
UPI001263B5F21.400e-1438.06uncharacterized protein LOC116129449 isoform X1 n=... [more]
UPI001CFB55D01.900e-1437.96uncharacterized protein LOC123201262 n=1 Tax=Mangi... [more]
A0A7J6WT79_THATH4.810e-1438.24Ribonuclease p protein subunit p29 n=1 Tax=Thalict... [more]
A0A1Y1IMU1_KLENI7.790e-1429.38Ribonuclease P family protein n=1 Tax=Klebsormidiu... [more]
A0A261XWW2_9FUNG1.620e-1329.47Uncharacterized protein n=1 Tax=Bifiguratus adelai... [more]
UPI0010AA45EA1.630e-1337.23uncharacterized protein LOC103433315 isoform X1 n=... [more]
L8GQK2_ACACA1.670e-1334.43Ribonuclease, putative n=1 Tax=Acanthamoeba castel... [more]
A0A7I4C8P0_PHYPA1.800e-1334.91Uncharacterized protein n=3 Tax=Physcomitrium pate... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig527contigH-paniculata_contig527:18390..24299 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score178.3
Seed ortholog evalue5.8e-42
Seed eggNOG ortholog2880.D8LNP5
Preferred namePOP4
KEGG koko:K03538
KEGG Pathwayko03008,ko03013,map03008,map03013
Hectar predicted targeting categoryother localisation
GOsGO:0000172,GO:0000294,GO:0000956,GO:0000966,GO:0001682,GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005655,GO:0005730,GO:0005732,GO:0006139,GO:0006364,GO:0006396,GO:0006399,GO:0006401,GO:0006402,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010605,GO:0010629,GO:0016070,GO:0016071,GO:0016072,GO:0016074,GO:0019222,GO:0019439,GO:0019843,GO:0022613,GO:0030677,GO:0030681,GO:0031070,GO:0031974,GO:0031981,GO:0032991,GO:0033204,GO:0033967,GO:0034470,GO:0034471,GO:0034641,GO:0034655,GO:0034660,GO:0034963,GO:0034965,GO:0042134,GO:0042254,GO:0043144,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044452,GO:0044464,GO:0046483,GO:0046700,GO:0048519,GO:0050789,GO:0060255,GO:0065007,GO:0070013,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:0099116,GO:1901360,GO:1901361,GO:1901363,GO:1901575,GO:1902494,GO:1902555,GO:1905348,GO:1990904
EggNOG free text desc.ribonuclease P RNA binding
EggNOG OGsKOG4046@1,KOG4046@2759
Ec32 ortholog descriptionRibonuclease P/MRP, subunit p29
Ec32 orthologEc-08_006350.1
EC3.1.26.5
COG Functional cat.P
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03009,ko03016,ko03029
Exons5
Model size1320
Cds size996
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930528.784791-UTR-H-paniculata_contig527:18389..186571622930528.784791-UTR-H-paniculata_contig527:18389..18657Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig527 18390..18657 -
1691481333.5295882-UTR-H-paniculata_contig527:18389..186571691481333.5295882-UTR-H-paniculata_contig527:18389..18657Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig527 18390..18657 -
1622930528.879452-UTR-H-paniculata_contig527:24243..242991622930528.879452-UTR-H-paniculata_contig527:24243..24299Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig527 24244..24299 -
1691481333.5912094-UTR-H-paniculata_contig527:24243..242991691481333.5912094-UTR-H-paniculata_contig527:24243..24299Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig527 24244..24299 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930528.8034165-CDS-H-paniculata_contig527:18657..188401622930528.8034165-CDS-H-paniculata_contig527:18657..18840Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig527 18658..18840 -
1691481333.5426822-CDS-H-paniculata_contig527:18657..188401691481333.5426822-CDS-H-paniculata_contig527:18657..18840Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig527 18658..18840 -
1622930528.818861-CDS-H-paniculata_contig527:20222..203121622930528.818861-CDS-H-paniculata_contig527:20222..20312Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig527 20223..20312 -
1691481333.5522602-CDS-H-paniculata_contig527:20222..203121691481333.5522602-CDS-H-paniculata_contig527:20222..20312Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig527 20223..20312 -
1622930528.835202-CDS-H-paniculata_contig527:20685..208411622930528.835202-CDS-H-paniculata_contig527:20685..20841Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig527 20686..20841 -
1691481333.5617752-CDS-H-paniculata_contig527:20685..208411691481333.5617752-CDS-H-paniculata_contig527:20685..20841Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig527 20686..20841 -
1622930528.8531837-CDS-H-paniculata_contig527:21528..218811622930528.8531837-CDS-H-paniculata_contig527:21528..21881Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig527 21529..21881 -
1691481333.5714078-CDS-H-paniculata_contig527:21528..218811691481333.5714078-CDS-H-paniculata_contig527:21528..21881Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig527 21529..21881 -
1622930528.8648925-CDS-H-paniculata_contig527:24029..242431622930528.8648925-CDS-H-paniculata_contig527:24029..24243Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig527 24030..24243 -
1691481333.5827804-CDS-H-paniculata_contig527:24029..242431691481333.5827804-CDS-H-paniculata_contig527:24029..24243Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig527 24030..24243 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig527.12647.1prot_H-paniculata_contig527.12647.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig527 18658..24243 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig527.12647.1

>prot_H-paniculata_contig527.12647.1 ID=prot_H-paniculata_contig527.12647.1|Name=mRNA_H-paniculata_contig527.12647.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=332bp
MSADKRALDDLDALFRAVPITKTPRRSSLSSASRPNKKVKHDQTSSPHQQ
QQRGNGSSNSKKRTAAVARLSELANESAANTESGRMYIRMLPELLPPHLR
APPAGARSDAKPGVVGAASAARFTEFVRGLLGARGERAATSAIESRVQHK
VLQLDNGCAQEGAQSASARAARAAGRIRQDLSGKQYQKKGLGSLKAERGR
IPSFRDLVGVHDLWKSYVARLQVTSKNAKTLEQLVLGADLQGSYLTVSRS
SVPSMVGLAGILLRETANTFQIVTPKEKARTIPKRGCAFRLAIGNRIITL
SGAALEGRRGGQKKVVPLKNGDDCRLRTAAL*
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mRNA from alignment at H-paniculata_contig527:18390..24299-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig527.12647.1 ID=mRNA_H-paniculata_contig527.12647.1|Name=mRNA_H-paniculata_contig527.12647.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=5910bp|location=Sequence derived from alignment at H-paniculata_contig527:18390..24299- (Halopteris paniculata Hal_grac_a_UBK monoicous)
TGTCGCGGTGCGCAGCGGTCAGCTAATCACAACGCAAGTTGTTTTGAGCC
TTTGAAATGTCGGCGGATAAGCGTGCACTCGATGACCTCGATGCTCTGTT
CCGTGCTGTACCTATAACCAAAACGCCCAGGAGGTCGTCGTTATCTTCGG
CTTCGAGGCCAAACAAGAAGGTCAAGCATGACCAAACATCATCTCCACAT
CAACAACAGCAGCGCGGCAACGGCAGCAGCAATTCTAAGAAGCGCACAGC
TGCGGTTGCTCGACTCTCAGGTCTTGTAGATGATAGAGCGGATTAGGCCG
AGCAATAGAAAATATCGATACGTGTGTTGGATGGGAAGAGCTGGTCCAGA
TCGTCTGTATTGTGCTGAACAGACACCATATGATGATCGCAATTATTTCC
GTTACTGTTGGGGGGATCGGTACGAGGTGGTCGATGCTCTAAAACCGGTC
CCAACGGCCAAATTTAAATTCATCTATTTGTTGTTTATACGTCATAACCC
AAAAATTACGAATTATTTTACTTCAAGTATTAAACCTTATATCGAGCAAA
TCTTATCTCTGAGATCGAACTGGCTAATGCCAATGTACTAAGGATATATC
GACAACTGTAATCTTCAAGTAGTAGATGCGAAGTAGCGATTTTGGACTCG
TCTTATAGTAGTGACGCACGTCACGGAAATAGTGTATTTTGAAGATGTTT
CTGTCCGTAGCTCGCTCAGTTTTTCGTTTAGCCAAAATCTCCACTGCACG
TGCACTACTGTAGTATTGTTCACAGCGAACACAGCGCAACAAACCGCGCA
CGATTCCTCGCAGTTGTCGACGAGAACTGCCTCATCATAGATCCCATGGC
TTGCCATGGGGCCAAAAAACATTTTTCGACCCTAATTTCAAGTATAAAGT
CGTACACCTAAATTGAGTATCATCTCCGCAAGGTTCAAACAAATTACTGA
GGTTTCAAAGAAAGGGAGTGATACTGCACAAATTTTCATGCGGGTATAGT
CGCTGGTGAGATAGAAGCCACCTCGTGACCGGTGTACAGCAGTGCAACAG
TCAGTACAGGCAGTAGACCAGATCACTCGACAAGACCTGCCCCCACCCCC
TTCTGTGCGTGTTAGTAGCTGTAAGGCTCAGTAATAAGCGAATATGGGCA
CCCGTCGAAAAACCAACGCACCAAGCCAAGTGGAAAAATGTAAACAGCTA
GCGCGCAAATTGGTCAAAACCAGAATTGGTAGAAGCCCTTCAAAGCATGA
AGCTGCCCCGAAGTTGAAACTCGCCGTGGAGGAGATGGCTTGGCGTTGTC
CAAGCGGCCGGGACACCGCTTGCCACAGGCAAGGTTTTACACGCTGGTGA
CGCGGTATTGCCCATAGGGTCCAGGGGAATGACCCAGACGGCAGTAGGCG
GCGGCTCAGATAGTGAACGGCGCTGAACCATGCCTCTTGTGTGTTGTGTG
GACTAGCTTGCCTCAGATCAGTTCGATCGATTCTTGCGGGTTGTTGTGTG
TGCCTTTCTGATAGGCTCATTTGAAACATTCGGTTAGCTGAAAAAATTGA
AGAAATAATCTCGGGGACAGGTTTTTAACCGTGGACCACCGTTATCGCTT
CCCCTCTCTGTTGCAGTCGTAGTATGTACGAGAGTAAGCGGAGCCGAGCA
ACAAATAAATTACGACCTGATCTGGAGGCAAGGATTCGGCTGTCGGCCGT
TATACGTGCCGTTCACAAAGCGATGCTCACTCTCGGCGATGATTGACTCT
GTTTACACTTTGTTATGCTTCGAAGGAGACGTTGTTGTATGTTATGGTTT
GGATTATCGTTTCTCGTCGGTTAATTGCTATCGGTTGCAAGCTTCCAAAA
CTGCTGTTGAATCATGAGCACATACTTGGCGTAGTCATAGTGTGATGCCG
AGCGTTGAGGGGTGCAGCTTTCACAATTTCAAATTTCAATTCCCCTTCCC
ACAAAAGATACCGAAATGACTTGCGTATTTTTTCGTGTTGTATGTTGTAC
CTACTATGGCCATGTTACACAATACGACCCAAACAAAATTTGTCTTGAAC
GTGTCGTTGTGTTCCGGTGCGGTAGAAAAGACGTACCGTATGTTCATGCA
ACATTTTCGAGTTTTTTCTATTTGATGTGATCACATCATCGACTTTGTTC
ATGGGCGGGGGGGTTGGTATCCTACTCGCTGCGGTGATCGAGCTGTTGGC
TTTTCGATTGCCGAAGCGCACCTCTCGGCTGCTACTGTGGTCGTACTTGG
TATGTATCAGAATAGACGCGGACAAAGAAAAACAACCCCGGAGACAGAAA
ACAGGCATAGAGCCTCAGCCATTTCTCGTCCGGCATCTCCAACCATGTCC
ACTTCCCATAAGCATCACCTGGCAAATATCTTGCCGCCCCGACGACTATG
CTACCCGCTATAACACAGAGCTGGCAAACGAGAGCGCTGCCAACACCGAA
TCGGGGCGAATGTACATCCGCATGCTCCCAGAACTTCTACCTCCACACCT
GCGCGCCCCGCCGGCGGGCGCCCGCTCCGATGCCAAACCCGGAGTCGTGG
GGGCTGCTTCCGCTGCCCGCTTCACAGAGTTCGTTCGTGGATTGCTCGGT
GCCCGGGGCGAGCGTGCGGCGACATCGGCTATTGAGTCGAGGGTGCAGCA
CAAGGTGCTACAGTTAGACAATGGTTGCGCTCAGGAGGGGGCGCAGAGCG
CGTCTGCGAGGGCCGCGCGAGCCGCGGGGAGGATTCGGCAGGATCTCAGC
GGCAAGCAGTACCAGAAGAAGGTAATATTACCGTGACGTAGTGCAGTGTA
ATTGGAAATTAATGCTGTGATGTACTGTACCGAGCTGTGGGAATGCGTGG
GTGAAAACTGGAGTCTATTAGAGGCTGCGTGTCCGGGAATAGAAGCCTCC
CCTTGGCTTGCAACGATGCGCCCGAAGATTGCACACAGTAGCACTCGGCT
TACGCATTGCTCATTAGGCGAAACGCATATCTAACGCCGAGTTGTGGGGC
TTCTTTGGAATGGAAAATGTAAGGGTTCCACTCCCCAAAGCGATTACTGA
AGTATCTCCGAGATTATGTCAAACTAAAACTAAGTGCAGCAACATGTGGC
AGTGGTTTCCCACCGATCTACATTCTGTAGGCGTGCTTTGCCCTGCCGCC
GACCCCTGCACGCGTTGCATTGCTTGGGCGCTGGGCTGTCTACGACAGTA
TGTGAAGCAAACACACTTCAGTAACTTACCTATCTAGTCGCTCGCGCAAA
GAGTCGTGGGTTGTTGTTTTGTTTGTTCCATGAGAATACACTTTCGTGTC
CATCAGCAAGTTCGTACAGGGATATGATACCCGGTATGTCTGGGATGGTG
TATCTGTTTCACCCTGATGTTTCGAATCATTGCAGCCCTCCCTGATATGC
TCAATTATTCTGATTTTTGCCTGCACCCCCGTCAATGTTTTTTCATGTGG
TTTCTCAGGGGCTGGGAAGTTTGAAAGCGGAGAGAGGAAGGATACCATCT
TTCCGTGACCTTGTGGGTGTTCACGACTTATGGAAGTCTTACGTAGCCCG
ATTACAAGTCACTTCGAAGAACGCCAAAACGTTGGAACAGCTGGTGCTCG
GTGCAGACCTGCAGGTACTGATTGTATGGACTGGCATGTGTACAGAAGAG
TAGAGAACAAAATCACTGTACAGCTGGATTAGAAAAGAGTGAGGGCATGC
ATTATCTGATATTGCCCTATCTAATCTTGGGCAATTCCTCGTTGAATTGG
GACAACATACATGGCTTCCACAGTACTTCTTCGCTTTCAGAGACAGGTAG
AGTAGGAGCCAGCCCACCGTTGTCTGGAATACCTTCAAACTTGATCACTT
TCCCCACCATTTCCCACTTTTTCCTCCCCCCATTCACAAGTTATGTATCT
CTCCACTACCCCCTAATGTAGCCTACCTCTCCCACGCACCCCGGCCATGC
ATGCCGCCATGCCATATAATACCTACGCTCGTGTCAGGGATCCTATTTGA
CAGTCTCGAGATCATCGGTACCCTCCATGGTGGGCCTCGCTGGAATTTTG
TTACGGGAAACAGCCAACACCTTTCAGGTTAGCTATCTTGGTGTTTGTTT
TCCCTTGCTGCCTCGTGTCAATGGCGTGCAAAAAAGCCCATAGAGGAAGT
CTTTTTTTTCATGTGTATTTGTTTTATGCACTCAGCATTCATGTTGGTGT
CGGCGCCAGGACCCCGTTTTTCATATGTTTCTAACCTATCTCCCTCTGAT
TTGCGCTCCTTTTTGCATGGTGCTCCCTCTGTATCGTAAGTCCTAGGGGA
GTATGGTTGCACTGTCATAATTTTGGATCAAAATGGATTAATCAAACACC
AAGCATGCCGTTCGAAAGCTCTGGATATCAGCTATCTCCTACATGTCGGA
GACGTAGGATTCCGAATAGGGCATATGCCCCAAGTCTGGGATAACTATTG
GGGATGCGGAAATGAACATGCAATTTTTGCACAAAACCTGCCGCTAATTT
CGATGCATAGAGCACATACACACACACCAAACACAAAGCAGCCCACACAA
CGCCCAATGCGAGCTGTGCCACCTCGTCGTCAAACCCTGAAAGCCCCTCG
GCAAACCCTGCAAGCCAATCGGCCCACTTCGAACATGGAGAACCCTCTGC
GGAAGCTCGCTATGGTTTGACTATGCGGCACTCAGAGGTTCTTCCACATG
GGAATGTTCGGCTGTCCAAAGGCGTAAGCAGTGCGCTCTTCCCTGAGTAC
GGAGCAAACCAAAATTACGTAGCTAAGGTATTGGGTGAGGAAAAGGAAGA
GCCTGAAATGGGAGCACGTTGGGTCTCAGCGCAAGAAGAGATGTGGGCTT
CCGTCGATCCTCACCCCAACCAAAAATCATCCGCTGATGATTGAGGAGAT
GGTTCCAGACTTTTTGACGAGTACGGCGAGAAAACGGTTTAGAAGGCGTG
GCAAAGTCTAGTTAAGAGGTATAACCAGGTGTTGGGGGCGTTTGGGAGCA
ACGACTTTGAGGTGGAACATGTGGGGGATCGATTTTGGCAGTAAACGAGT
AGTTTGCTTTACACTGTAAAATGGCCAAGAAACATTTTGGGCGACGACGA
GGAGAGTGAATCAGAGGGACACGGAGAATTACTGCAAGGAATCCAACGCA
GGAGACCTTTCTTAATCGGAGCTCTTGGTGAAGAATCAAGAGTGTAAAAT
CCTAATCCATAAAGATTCACGAGACGAAGGAGTGTATCGCTAGTTGGTGC
TGTAATACACGAATGGTTATCCAACACTTTTGAGCACGTGCTTGAAATAT
GCCTCCCGTGTGCTATCAGCTGATGTCATGCCTGAGGTTACAGGACGACG
CTCGATCCAGCATCCCCCATTGACAAGCTCGGTTTACTGATGACTGATAA
CGCTTCGTCCTGACTTCACCTCGCCGTTTGCTGTGCCACTCTCGCATACT
TGATGGTAGATCGTTACGCCCAAGGAAAAGGCGAGAACGATCCCAAAACG
TGGTTGTGCCTTTCGTCTGGCTATCGGCAATCGCATAATCACTCTCAGCG
GGGCAGCATTGGAAGGCAGACGGGGTGGACAGAAGAAAGTGGTGCCGCTC
AAGAATGGCGACGACTGTCGCCTTCGAACTGCAGCGTTGTAACATTGTGA
ATTTTGCTGTGCTGCTGTTTTGTGTGTCCGACAGTTGGCAACTAAATTGG
ATATAGAGCTGTAGTTACAGGCTTTCAATCATGTATTTTAGTGACGGTAA
CAAATATGTTTCTAGGTGAAACGAGCGGTGTAATACCAGGTCATTCGACT
TTGCAACAGTTTTTATATGAAGGCGGAAGCAAGTGATGTGCTACTATTGC
CTCAGGTTGTGTTTGTTGTTCAGTAGAGTAATTTAATACTCTCTTTTTGT
AGTTCCGTTC
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Coding sequence (CDS) from alignment at H-paniculata_contig527:18390..24299-

>mRNA_H-paniculata_contig527.12647.1 ID=mRNA_H-paniculata_contig527.12647.1|Name=mRNA_H-paniculata_contig527.12647.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1992bp|location=Sequence derived from alignment at H-paniculata_contig527:18390..24299- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGTCGGCGGATAAGCGTGCACTCGATGACCTCGATGCTCTGTTCCGTGC
TGTACCTATAACCAAAACGCCCAGGAGGTCGTCGTTATCTTCGGCTTCGA
GGCCAAACAAGAAGGTCAAGCATGACCAAACATCATCTCCACATCAACAA
CAGCAGCGCGGCAACGGCAGCAGCAATTCTAAGAAGCGCACAGCTGCGGT
TGCTCGACTCTCAGATGTCGGCGGATAAGCGTGCACTCGATGACCTCGAT
GCTCTGTTCCGTGCTGTACCTATAACCAAAACGCCCAGGAGGTCGTCGTT
ATCTTCGGCTTCGAGGCCAAACAAGAAGGTCAAGCATGACCAAACATCAT
CTCCACATCAACAACAGCAGCGCGGCAACGGCAGCAGCAATTCTAAGAAG
CGCACAGCTGCGGTTGCTCGACTCTCAGAGCTGGCAAACGAGAGCGCTGC
CAACACCGAATCGGGGCGAATGTACATCCGCATGCTCCCAGAACTTCTAC
CTCCACACCTGCGCGCCCCGCCGGCGGGCGCCCGCTCCGATGCCAAACCC
GGAGTCGTGGGGGCTGCTTCCGCTGCCCGCTTCACAGAGTTCGTTCGTGG
ATTGCTCGGTGCCCGGGGCGAGCGTGCGGCGACATCGGCTATTGAGTCGA
GGGTGCAGCACAAGGTGCTACAGTTAGACAATGGTTGCGCTCAGGAGGGG
GCGCAGAGCGCGTCTGCGAGGGCCGCGCGAGCCGCGGGGAGGATTCGGCA
GGATCTCAGCGGCAAGCAGTACCAGAAGAAGAGCTGGCAAACGAGAGCGC
TGCCAACACCGAATCGGGGCGAATGTACATCCGCATGCTCCCAGAACTTC
TACCTCCACACCTGCGCGCCCCGCCGGCGGGCGCCCGCTCCGATGCCAAA
CCCGGAGTCGTGGGGGCTGCTTCCGCTGCCCGCTTCACAGAGTTCGTTCG
TGGATTGCTCGGTGCCCGGGGCGAGCGTGCGGCGACATCGGCTATTGAGT
CGAGGGTGCAGCACAAGGTGCTACAGTTAGACAATGGTTGCGCTCAGGAG
GGGGCGCAGAGCGCGTCTGCGAGGGCCGCGCGAGCCGCGGGGAGGATTCG
GCAGGATCTCAGCGGCAAGCAGTACCAGAAGAAGGGGCTGGGAAGTTTGA
AAGCGGAGAGAGGAAGGATACCATCTTTCCGTGACCTTGTGGGTGTTCAC
GACTTATGGAAGTCTTACGTAGCCCGATTACAAGTCACTTCGAAGAACGC
CAAAACGTTGGAACAGCTGGTGCTCGGTGCAGACCTGCAGGGGCTGGGAA
GTTTGAAAGCGGAGAGAGGAAGGATACCATCTTTCCGTGACCTTGTGGGT
GTTCACGACTTATGGAAGTCTTACGTAGCCCGATTACAAGTCACTTCGAA
GAACGCCAAAACGTTGGAACAGCTGGTGCTCGGTGCAGACCTGCAGGGAT
CCTATTTGACAGTCTCGAGATCATCGGTACCCTCCATGGTGGGCCTCGCT
GGAATTTTGTTACGGGAAACAGCCAACACCTTTCAGGGATCCTATTTGAC
AGTCTCGAGATCATCGGTACCCTCCATGGTGGGCCTCGCTGGAATTTTGT
TACGGGAAACAGCCAACACCTTTCAGATCGTTACGCCCAAGGAAAAGGCG
AGAACGATCCCAAAACGTGGTTGTGCCTTTCGTCTGGCTATCGGCAATCG
CATAATCACTCTCAGCGGGGCAGCATTGGAAGGCAGACGGGGTGGACAGA
AGAAAGTGGTGCCGCTCAAGAATGGCGACGACTGTCGCCTTCGAACTGCA
GCGTTGTAAATCGTTACGCCCAAGGAAAAGGCGAGAACGATCCCAAAACG
TGGTTGTGCCTTTCGTCTGGCTATCGGCAATCGCATAATCACTCTCAGCG
GGGCAGCATTGGAAGGCAGACGGGGTGGACAGAAGAAAGTGGTGCCGCTC
AAGAATGGCGACGACTGTCGCCTTCGAACTGCAGCGTTGTAA
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