prot_H-paniculata_contig527.12645.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig527.12645.1
Unique Nameprot_H-paniculata_contig527.12645.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length509
Homology
BLAST of mRNA_H-paniculata_contig527.12645.1 vs. uniprot
Match: A0A6H5K2V5_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2V5_9PHAE)

HSP 1 Score: 241 bits (616), Expect = 3.570e-68
Identity = 234/478 (48.95%), Postives = 258/478 (53.97%), Query Frame = 0
Query:   82 NIGASPSSQLASPPPGLPHCSSTAELVALGLISAGGPTTPEHNTSTSSGQLAYNPVTPNGGMNGSPNGGNAGLETTGSGXXXXXXXXXXXXXXADISGNVAGNXXXXXXXXXGMGLGLRNHSLTNLANMVRSQSVSSFHADLFNNSEGGVAEEGRVTAAHDGPSWGSYPANLDKAGXXXXXXXXXXXXXXXXXXXXHPFTLSPVTG-SLAGSGRGAGSSRPPPSSXXXXXXXX-----GMDLSPGQFAGRGTAPRREV-ERGVPAWSSSTRTSQRRPVGV------SGSAMDHGG-VPAGRAGSGA-PTGRTMVYNRSDTDLVASFSRLGFGSSGGISRWSPHMSPAASPL-GAPLLEEDPLDLELEET-----GHELGSGGTYV------TSLRSGGGRRGLGSSNSGESGAG--------LPRHASYPSLALSRGG---------------YGMEDLVQGAFEGLGVGDSAGGGEG 509
            ++ AS SS   +PPPGLP  SSTAELVALG   +GG        S+  G                              XXXXXXX X      DI G   G    XXXXXXGMGLGLRNHSLTNLANMVRSQSVSSFH+++F  + GG       +AA + P+WGSYPANLDK G  XXXXXXXXX           FTLSP       G+GRGA   RPP                G DLSP QFAGRGTA RREV +RG+ A                      GS+ D  G VP+G   SGA P GR MV+NRSDTDLVASFSR GFG  GG+SRWSP MSP ASPL GAPLLEEDPLDLELEE      G   G+GG         +S  +  GRRGL     G+  AG        LPRHASYPSL +SRGG               YGMEDLV GA E L  GDSA GG G
Sbjct:    7 SLSASASSGSLAPPPGLPRSSSTAELVALGFDPSGGMEGGNDLNSSDGGXXXXXXXX---------------XXXXXXXXXXXXXXVXGGHDAGDIGGKNDGTGGTXXXXXXGMGLGLRNHSLTNLANMVRSQSVSSFHSEIF--ASGGKPVG---SAAVESPAWGSYPANLDKMGSGXXXXXXXXXEDI--------FTLSPSPSVGPRGAGRGALPMRPPTGGGDSDVVGGTGAGAGADLSPQQFAGRGTAARREVVDRGMSAXXXXXXXXXXXXXXXXXXXMGGGSSFDPRGIVPSGPGRSGALPGGRAMVHNRSDTDLVASFSRFGFGQ-GGVSRWSPLMSPTASPLVGAPLLEEDPLDLELEENASRGAGASGGAGGAAADTFGPPSSFLTSHGRRGL---MDGQGAAGEAPSMEVRLPRHASYPSLTVSRGGGSXXXXXXXXXXXXGYGMEDLVHGALEHLTAGDSATGGAG 452          
BLAST of mRNA_H-paniculata_contig527.12645.1 vs. uniprot
Match: D8LNL2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNL2_ECTSI)

HSP 1 Score: 217 bits (553), Expect = 1.170e-61
Identity = 200/372 (53.76%), Postives = 222/372 (59.68%), Query Frame = 0
Query:   82 NIGASPSSQLASPPPGLPHCSSTAELVALGLISAGGPTTPEHNTSTSSGQLAYNPVTPNGGMNGSPNGGNAGLETTGSGXXXXXXXXXXXXXXADISGNVAGNXXXXXXXXXGMGLGLRNHSLTNLANMVRSQSVSSFHADLFNNSEGGVAEEGRVTAAHDGPSWGSYPANLDKAGXXXXXXXXXXXXXXXXXXXXHPFTLSPVTGSLAGSGRGAGSSRPPPSSXXXXXXXX---------------GMDLSPGQFAGRGTAPRREV-ERGVPAWSS--STRTSQRRPVGVSGSAMDHGGVPAGRAGSGAP-TGRTMVYNRSDTDLVASFSRLGFGSSGGISRWSPHMSPAASPL-GAPLLEEDPLDLELEE 433
            ++ AS SS   +PPPGLP  SSTAELVALG   +G         S+  G                              XXXXXXX        D+ G   G XXXXXXXXX MGLGLRNHSLTNLANMVRSQSVSSFH+++F  + GG       + A D P+WGSYPANLDK G  XXXXXXXXXX          FT+SP  G   G+GRG    RPP         XX               G DLSP QFAGRGTA RREV +RG+ A S+  STRTSQRRP+G   S    G VP+G   SGAP +GR MV+NRSDTDLVASFSRLGFG  GG+SRWSP MSP ASPL GAPLLEEDPLDLELEE
Sbjct:    5 SLSASASSGSLAPPPGLPRSSSTAELVALGFDPSGVMDGGNDLNSSDGGXXXXXXXXXXXXX----------XXXXXXXXXXXXXXVGGGLDAGDMGGKDDGTXXXXXXXXXXMGLGLRNHSLTNLANMVRSQSVSSFHSEIF--ASGGKPVR---STAIDSPAWGSYPANLDKMGSGXXXXXXXXXXEDM-------FTVSPSMGPR-GAGRGTLPMRPPTGGGDRGGVXXXXXXXXXDVXXXXXXGADLSPQQFAGRGTAARREVVDRGMSAGSAAGSTRTSQRRPMGGGSSFDPRGMVPSGPGRSGAPPSGRAMVHNRSDTDLVASFSRLGFGQ-GGVSRWSPLMSPTASPLVGAPLLEEDPLDLELEE 352          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig527.12645.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K2V5_9PHAE3.570e-6848.95Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
D8LNL2_ECTSI1.170e-6153.76Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig527contigH-paniculata_contig527:4339..5865 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig527.12645.1mRNA_H-paniculata_contig527.12645.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig527 1772..5865 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig527.12645.1 ID=prot_H-paniculata_contig527.12645.1|Name=mRNA_H-paniculata_contig527.12645.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=509bp
MALLDEQYLSHDQRSLLRSPSAAYFGGSKGGGQVDSPAKLPSHQHQQVSI
RNGGDSLHSHKTNTSHHQGMPAPFSGPTDDSNIGASPSSQLASPPPGLPH
CSSTAELVALGLISAGGPTTPEHNTSTSSGQLAYNPVTPNGGMNGSPNGG
NAGLETTGSGGGGQSSGGGGGGGGADISGNVAGNSSGGTGSAGGMGLGLR
NHSLTNLANMVRSQSVSSFHADLFNNSEGGVAEEGRVTAAHDGPSWGSYP
ANLDKAGGGGGGGGGGGGVSGGGGGGGHPFTLSPVTGSLAGSGRGAGSSR
PPPSSSGAGGDGGGMDLSPGQFAGRGTAPRREVERGVPAWSSSTRTSQRR
PVGVSGSAMDHGGVPAGRAGSGAPTGRTMVYNRSDTDLVASFSRLGFGSS
GGISRWSPHMSPAASPLGAPLLEEDPLDLELEETGHELGSGGTYVTSLRS
GGGRRGLGSSNSGESGAGLPRHASYPSLALSRGGYGMEDLVQGAFEGLGV
GDSAGGGEG
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