mRNA_H-paniculata_contig5267.12642.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig5267.12642.1
Unique NamemRNA_H-paniculata_contig5267.12642.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig5267.12642.1 vs. uniprot
Match: D8LEC5_ECTSI (Tup_N domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEC5_ECTSI)

HSP 1 Score: 211 bits (537), Expect = 3.070e-58
Identity = 108/163 (66.26%), Postives = 122/163 (74.85%), Query Frame = 1 
Query:    1 VKQDTKMVAAASIDRIVHVWSTQTHELLHRLDGHTESVYAVTFSHEGDRLVSGGLDKTIK-----VWDLGPSSEGRLSPQAQTLPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKLMKKVATVTGFKNSVIGVSASPTNGMFATGSGDNLVCVWNYGER 474
            ++QDT MVAAASIDR+VHVWSTQTH++LHRLDGH+ESVYA+TFS +G+RLVSGGLDKTIK     VWDLGP SEGRLSPQA+TLPG                               A+LMK+VAT+TGFKNSVIGVSASP N MFATGSGDNLVCVWNYG+R
Sbjct:  636 LRQDTTMVAAASIDRVVHVWSTQTHKILHRLDGHSESVYAITFSADGNRLVSGGLDKTIKASAEMVWDLGPGSEGRLSPQAKTLPGGHKDYVLSVCFSQDGKYIISGSKDRSVTMWDARLMKRVATITGFKNSVIGVSASPFNSMFATGSGDNLVCVWNYGDR 798
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BLAST of mRNA_H-paniculata_contig5267.12642.1 vs. uniprot
Match: A0A6H5JC28_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JC28_9PHAE)

HSP 1 Score: 85.9 bits (211), Expect = 1.740e-15
Identity = 40/46 (86.96%), Postives = 43/46 (93.48%), Query Frame = 1 
Query:  337 AKLMKKVATVTGFKNSVIGVSASPTNGMFATGSGDNLVCVWNYGER 474
            A+LMK+VAT+TGFKNSVIGVSASP N MFATGSGDNLVCVWNYG R
Sbjct:    4 ARLMKRVATITGFKNSVIGVSASPLNSMFATGSGDNLVCVWNYGVR 49
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BLAST of mRNA_H-paniculata_contig5267.12642.1 vs. uniprot
Match: F4P4P5_BATDJ (Tup_N domain-containing protein (Fragment) n=1 Tax=Batrachochytrium dendrobatidis (strain JAM81 / FGSC 10211) TaxID=684364 RepID=F4P4P5_BATDJ)

HSP 1 Score: 73.2 bits (178), Expect = 9.110e-11
Identity = 59/196 (30.10%), Postives = 77/196 (39.29%), Query Frame = 1 
Query:   10 DTKMVAAASIDRIVHVWSTQTHELLHRLDGHTESVYAVTFSHEGDRLVSGGLDKTIKVWDLGPSSE-----GRLSPQAQ--------------------------TLPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKLMKKVATVTGFKNSVIGVSASPTNGMFATGSGDNLVCVWNYGERRSTSSRPPGA 504
            D++ VAA +ID  + +W   T +LL R  GH  SVYAV FS  G  LVSG LD+ ++VWD+   +E     G +   A+                            PG                               A     VA V+G +NSVI V+ S   G+ ATGSGD    +W      S S  PP A
Sbjct:  360 DSRCVAAGAIDDTIRLWDALTGQLLERFVGHQNSVYAVAFSPTGLSLVSGSLDRNLRVWDISAETEQFLKSGVIPTPAEIAKRHSVVNSKPRHLFRGHKDFILSVAFPGKGSSLDWIVSSSKDRHVTLWDASLDGTNPFSAP----VALVSGHRNSVISVAVSSVGGLLATGSGDMRTRLWRVSCDTSASDVPPSA 551
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BLAST of mRNA_H-paniculata_contig5267.12642.1 vs. uniprot
Match: W7HR05_9PEZI (Tup_N domain-containing protein n=1 Tax=Drechslerella stenobrocha 248 TaxID=1043628 RepID=W7HR05_9PEZI)

HSP 1 Score: 68.6 bits (166), Expect = 3.090e-9
Identity = 47/138 (34.06%), Postives = 64/138 (46.38%), Query Frame = 1 
Query:   73 HELLHRL-DGHTESVYAVTFSHEGDRLVSGGLDKTIKVWDL--GPSSEGRLS---PQAQTLPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKLMKKVATVT-GFKNSVIGVSASPTNGMFATGSGDNLVCVWNY 465
            HEL H   +GH +SVY+V F+  G  L+SG LDKT+K+W L  G S  G L+   P+ +T  G                                    ++  +  G KNSVI V+ SP   +FATGSGD    +W+Y
Sbjct:  438 HELAHEHNEGHRDSVYSVAFTSNGAGLISGSLDKTVKMWTLASGKSQAGGLTKPEPRLKTFEGHEDFVLSVAQTPDAYGPWVISGSKDRRVQFWDPRTNQIQLMLQGHKNSVISVAPSPAGRLFATGSGDYKARIWSY 575
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BLAST of mRNA_H-paniculata_contig5267.12642.1 vs. uniprot
Match: S8AFQ2_DACHA (Tup_N domain-containing protein n=1 Tax=Dactylellina haptotyla (strain CBS 200.50) TaxID=1284197 RepID=S8AFQ2_DACHA)

HSP 1 Score: 67.4 bits (163), Expect = 7.640e-9
Identity = 44/130 (33.85%), Postives = 61/130 (46.92%), Query Frame = 1 
Query:   94 DGHTESVYAVTFSHEGDRLVSGGLDKTIKVWDL----GPSSEG-RLSPQAQTLPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-AKLMKKVATVTGFKNSVIGVSASPTNGMFATGSGDNLVCVWNY 465
            +GH +SVY+V F+  G  L+SG LDKT+K+W+L    G  S G +L P+ +T  G                                 +  +    + G KNSVI VS SP   +FATGSGD    +W+Y
Sbjct:  475 EGHRDSVYSVAFTANGTGLISGSLDKTVKMWNLSSATGVQSGGAKLEPRVKTFEGHEDFVLSVAQTPDTYGTWVMSGSKDRRVQFWDPRTGQTQLMLQGHKNSVISVSPSPVGKLFATGSGDYKARIWSY 604
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BLAST of mRNA_H-paniculata_contig5267.12642.1 vs. uniprot
Match: A0A7C8KB39_ORBOL (Proteinral transcription repressor n=1 Tax=Orbilia oligospora TaxID=2813651 RepID=A0A7C8KB39_ORBOL)

HSP 1 Score: 67.4 bits (163), Expect = 7.750e-9
Identity = 43/129 (33.33%), Postives = 61/129 (47.29%), Query Frame = 1 
Query:   94 DGHTESVYAVTFSHEGDRLVSGGLDKTIKVWDLGP-SSEG---RLSPQAQTLPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-AKLMKKVATVTGFKNSVIGVSASPTNGMFATGSGDNLVCVWNY 465
            +GH +SVY+V F+  G  L+SG LDKT+K+W L   SS+G   +L P+ +T  G                                 +  +    + G KNSVI V+ SP   +FATGSGD    +W+Y
Sbjct:  495 EGHRDSVYSVAFTANGTGLISGSLDKTVKMWTLSSASSQGVGQKLEPRVKTFEGHEDFVLSVAQTPDAYGPWVMSGSKDRRVQFWDPRTNQTQLMLQGHKNSVISVAPSPAGKLFATGSGDYKARIWSY 623
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BLAST of mRNA_H-paniculata_contig5267.12642.1 vs. uniprot
Match: A0A4V1IUU8_9FUNG (Tup_N domain-containing protein (Fragment) n=1 Tax=Caulochytrium protostelioides TaxID=1555241 RepID=A0A4V1IUU8_9FUNG)

HSP 1 Score: 67.4 bits (163), Expect = 8.210e-9
Identity = 54/182 (29.67%), Postives = 80/182 (43.96%), Query Frame = 1 
Query:   10 DTKMVAAASIDRIVHVWSTQTHELLHRLDGHTESVYAVTFSHEGDRLVSGGLDKTIKVWD----LGPSS--EGRLSPQAQ------------TLP-------------GXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKLMKKVA-TVTGFKNSVIGVSASPTNGMFATGSGDNLVCVW 459
            + + VA+  +D++V +W T T +LL R +GH +SVY+V+FS +G  LVSG LDK++K+      L P    E R++ +A+             LP             G                               + +    A  + G KNSVI V+ SPT G+ ATGSGD    +W
Sbjct:  538 EPRCVASGCLDKMVRIWDTATGQLLERFEGHKDSVYSVSFSPDGRSLVSGSLDKSLKLGGGNGHLRPEYRVEARVTTRARHTFVGHRDFVLSLLPPDPSLASIEWIVSGSKDRTVVFWDGQSLLNPQSGGVHQLGPEGEVSDVNSATAFMLQGHKNSVISVAVSPTTGLLATGSGDCRARIW 719
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BLAST of mRNA_H-paniculata_contig5267.12642.1 vs. uniprot
Match: A0A177WEU4_BATDL (Tup_N domain-containing protein n=1 Tax=Batrachochytrium dendrobatidis (strain JEL423) TaxID=403673 RepID=A0A177WEU4_BATDL)

HSP 1 Score: 67.0 bits (162), Expect = 1.240e-8
Identity = 31/66 (46.97%), Postives = 42/66 (63.64%), Query Frame = 1 
Query:   10 DTKMVAAASIDRIVHVWSTQTHELLHRLDGHTESVYAVTFSHEGDRLVSGGLDKTIKVWDLGPSSE 207
            D++ VAA +ID  + +W   T +LL R  GH  SVYAV FS  G  LVSG LD+ ++VWD+   +E
Sbjct:  720 DSRCVAAGAIDDTIRLWDALTGQLLERFVGHQNSVYAVAFSPTGLSLVSGSLDRNLRVWDISAETE 785
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BLAST of mRNA_H-paniculata_contig5267.12642.1 vs. uniprot
Match: A0A2S7Q4G7_9HELO (Transcriptional repressor rco-1 protein n=1 Tax=Rutstroemia sp. NJR-2017a BBW TaxID=2070414 RepID=A0A2S7Q4G7_9HELO)

HSP 1 Score: 65.5 bits (158), Expect = 2.450e-8
Identity = 47/158 (29.75%), Postives = 66/158 (41.77%), Query Frame = 1 
Query:   10 DTKMVAAASIDRIVHVWSTQTHELLHRLDGHTESVYAVTFSHEGDRLVSGGLDKTIKVWDLGPSSE------GRLSPQAQTLPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKLMKKVATVTGFKNSVIGVSASPTNGMFATGSGDNLVCVWNY 465
            D + +A  S D+++ + +    E L   DGHT SVY++ FS     LVSG LDKT+K+W++ P  +       R S    T  G                                +  K    + G KN V  + AS + G FATGSGD    +W Y
Sbjct:  239 DGRYLATGSEDKLIRIATGCLVEQLKGRDGHTNSVYSIDFSPNSKSLVSGSLDKTVKIWNISPLQDPYNFDVSRRSSCRSTFKGHEDAVLTAKYTFKSGCILSGSKDKSVRLWD-TRTGKSELVLYGHKNGVTCI-ASRSKGYFATGSGDTTAKIWRY 394
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BLAST of mRNA_H-paniculata_contig5267.12642.1 vs. uniprot
Match: A0A6G0XPL3_9STRA (Tup_N domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XPL3_9STRA)

HSP 1 Score: 65.5 bits (158), Expect = 3.610e-8
Identity = 72/152 (47.37%), Postives = 95/152 (62.50%), Query Frame = 1 
Query:   10 DTKMVAAASIDRIVHVWSTQTHELLHRLDGHTESVYAVTFSHEGDRLVSGGLDKTIKVWDLGPSSEGRLSPQAQTLPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKLMKKVATVTGFKNSVIGVSASPTNGMFATGSGDNLVCVWNY 465
            D +++AAAS+D++V +W TQT +L+ RL+GH                             +  S+ GR + + + L  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX +  + V TV+G++NSVI V +SP +  FATGSGD   C+W Y
Sbjct:  608 DGRLLAAASLDKVVRIWDTQTTQLMDRLEGHCXXXXXXXXXXXXXXXXXXXXXXXXXXXXV--SASGRTTTRPRMLFQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPRTARSVLTVSGYRNSVINVHSSPASPHFATGSGDCFACIWKY 757
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5267.12642.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LEC5_ECTSI3.070e-5866.26Tup_N domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5JC28_9PHAE1.740e-1586.96Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
F4P4P5_BATDJ9.110e-1130.10Tup_N domain-containing protein (Fragment) n=1 Tax... [more]
W7HR05_9PEZI3.090e-934.06Tup_N domain-containing protein n=1 Tax=Drechslere... [more]
S8AFQ2_DACHA7.640e-933.85Tup_N domain-containing protein n=1 Tax=Dactylelli... [more]
A0A7C8KB39_ORBOL7.750e-933.33Proteinral transcription repressor n=1 Tax=Orbilia... [more]
A0A4V1IUU8_9FUNG8.210e-929.67Tup_N domain-containing protein (Fragment) n=1 Tax... [more]
A0A177WEU4_BATDL1.240e-846.97Tup_N domain-containing protein n=1 Tax=Batrachoch... [more]
A0A2S7Q4G7_9HELO2.450e-829.75Transcriptional repressor rco-1 protein n=1 Tax=Ru... [more]
A0A6G0XPL3_9STRA3.610e-847.37Tup_N domain-containing protein n=1 Tax=Aphanomyce... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5267contigH-paniculata_contig5267:8649..13923 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score204.5
Seed ortholog evalue6.8e-50
Seed eggNOG ortholog2880.D8LEC5
Preferred nameTUP1
KEGG koko:K06666,ko:K14963
KEGG Pathwayko04011,ko04111,ko04934,map04011,map04111,map04934
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000122,GO:0000228,GO:0000429,GO:0000430,GO:0000433,GO:0000785,GO:0000790,GO:0000988,GO:0000989,GO:0001076,GO:0001191,GO:0001196,GO:0001198,GO:0003006,GO:0003674,GO:0005488,GO:0005515,GO:0005543,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005694,GO:0006323,GO:0006325,GO:0006333,GO:0006338,GO:0006342,GO:0006355,GO:0006357,GO:0006950,GO:0006970,GO:0006996,GO:0007154,GO:0007155,GO:0007530,GO:0007531,GO:0007532,GO:0007584,GO:0008150,GO:0008289,GO:0009267,GO:0009372,GO:0009405,GO:0009605,GO:0009607,GO:0009628,GO:0009651,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009987,GO:0009991,GO:0010033,GO:0010035,GO:0010038,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010565,GO:0010570,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0016043,GO:0016458,GO:0016584,GO:0017053,GO:0019216,GO:0019217,GO:0019219,GO:0019222,GO:0019747,GO:0019899,GO:0022414,GO:0022607,GO:0022610,GO:0030154,GO:0030447,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031497,GO:0031667,GO:0031668,GO:0031669,GO:0031670,GO:0031974,GO:0031981,GO:0032502,GO:0032879,GO:0032991,GO:0033554,GO:0033993,GO:0034728,GO:0035091,GO:0035690,GO:0035950,GO:0035952,GO:0035953,GO:0035955,GO:0036033,GO:0036166,GO:0036170,GO:0036171,GO:0036180,GO:0040007,GO:0040008,GO:0040029,GO:0042221,GO:0042304,GO:0042393,GO:0042493,GO:0042594,GO:0042826,GO:0043044,GO:0043156,GO:0043157,GO:0043167,GO:0043168,GO:0043207,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043486,GO:0043933,GO:0044085,GO:0044111,GO:0044114,GO:0044115,GO:0044182,GO:0044403,GO:0044409,GO:0044419,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044446,GO:0044451,GO:0044454,GO:0044464,GO:0044764,GO:0044877,GO:0045013,GO:0045014,GO:0045165,GO:0045814,GO:0045827,GO:0045833,GO:0045892,GO:0045893,GO:0045894,GO:0045926,GO:0045934,GO:0045935,GO:0045944,GO:0045990,GO:0046015,GO:0046677,GO:0046688,GO:0046890,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048869,GO:0050789,GO:0050794,GO:0050896,GO:0051049,GO:0051051,GO:0051171,GO:0051172,GO:0051173,GO:0051252,GO:0051253,GO:0051254,GO:0051276,GO:0051701,GO:0051704,GO:0051707,GO:0051716,GO:0051828,GO:0051832,GO:0051834,GO:0052173,GO:0060255,GO:0060258,GO:0061984,GO:0061985,GO:0061986,GO:0061987,GO:0062012,GO:0065007,GO:0070013,GO:0070784,GO:0070887,GO:0071103,GO:0071214,GO:0071236,GO:0071241,GO:0071248,GO:0071280,GO:0071310,GO:0071396,GO:0071470,GO:0071472,GO:0071473,GO:0071496,GO:0071824,GO:0071840,GO:0072364,GO:0080025,GO:0080090,GO:0080134,GO:0080135,GO:0090087,GO:0090088,GO:0090089,GO:0090568,GO:0097305,GO:0097306,GO:0097307,GO:0097308,GO:0098609,GO:0104004,GO:0140110,GO:1900428,GO:1900429,GO:1901700,GO:1901701,GO:1901981,GO:1902679,GO:1902680,GO:1902936,GO:1903506,GO:1903507,GO:1903508,GO:2000112,GO:2000113,GO:2000217,GO:2000531,GO:2000877,GO:2000879,GO:2001020,GO:2001141
EggNOG free text desc.WD repeat-containing protein
EggNOG OGsKOG0266@1,KOG0266@2759
COG Functional cat.B
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03021,ko03036
Exons3
Model size912
Cds size894
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5267.12642.1prot_H-paniculata_contig5267.12642.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig5267 8649..13905 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930528.101749-CDS-H-paniculata_contig5267:8648..92061622930528.101749-CDS-H-paniculata_contig5267:8648..9206Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5267 8649..9206 -
1691481333.2208095-CDS-H-paniculata_contig5267:8648..92061691481333.2208095-CDS-H-paniculata_contig5267:8648..9206Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5267 8649..9206 -
1622930528.11602-CDS-H-paniculata_contig5267:10943..111171622930528.11602-CDS-H-paniculata_contig5267:10943..11117Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5267 10944..11117 -
1691481333.232418-CDS-H-paniculata_contig5267:10943..111171691481333.232418-CDS-H-paniculata_contig5267:10943..11117Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5267 10944..11117 -
1622930528.1298602-CDS-H-paniculata_contig5267:13743..139051622930528.1298602-CDS-H-paniculata_contig5267:13743..13905Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5267 13744..13905 -
1691481333.2475965-CDS-H-paniculata_contig5267:13743..139051691481333.2475965-CDS-H-paniculata_contig5267:13743..13905Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5267 13744..13905 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930528.1495872-UTR-H-paniculata_contig5267:13905..139231622930528.1495872-UTR-H-paniculata_contig5267:13905..13923Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig5267 13906..13923 -
1691481333.261889-UTR-H-paniculata_contig5267:13905..139231691481333.261889-UTR-H-paniculata_contig5267:13905..13923Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig5267 13906..13923 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig5267.12642.1

>prot_H-paniculata_contig5267.12642.1 ID=prot_H-paniculata_contig5267.12642.1|Name=mRNA_H-paniculata_contig5267.12642.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=298bp
MVAAASIDRIVHVWSTQTHELLHRLDGHTESVYAVTFSHEGDRLVSGGLD
KTIKVWDLGPSSEGRLSPQAQTLPGGHSDYVLSVCFSQDGKYIISGSKDR
SVTIWDAKLMKKVATVTGFKNSVIGVSASPTNGMFATGSGDNLVCVWNYG
ERRSTSSRPPGAATAAGTTPAPAGTAGSERPRSSSPGSSPGEGGKVGNTE
ADGDGSDDSDGGANGKESGKSKSGRSRGDVERGGGGGIVEERGVAAAATA
GKGEGEGSSRSKEGRDKNDGATTTEEQEEDDGATPAAGRNSANSGGKG
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mRNA from alignment at H-paniculata_contig5267:8649..13923-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig5267.12642.1 ID=mRNA_H-paniculata_contig5267.12642.1|Name=mRNA_H-paniculata_contig5267.12642.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=5275bp|location=Sequence derived from alignment at H-paniculata_contig5267:8649..13923- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GTAAAACAGGACACGAAGATGGTTGCTGCAGCGTCGATCGACCGCATCGT
GCACGTTTGGTCTACCCAGACACACGAGCTCCTTCACCGACTGGACGGCC
ACACCGAGTCTGTATATGCCGTAACGTTCTCTCACGAGGGTGATCGGCTC
GTCTCTGGAGGGCTCGACAAGACTATCAAGGTGCAGTAAAAGTTAATCCG
TATAGTTAATCTGTGTAGATAATCCGTAGAAAAACACTGGTTGTTTGCGG
GTCTTTATTACTATAGGAGTTACCGTATTTGTCGCCCTCCCTCACCGAAC
AAGTTAGCTACACATTTGAACCCTTATCCCCCCATAGGGCTACTAGCTAT
ACCACGTAGTTTATTCTACTTTAAGGTGTTTTTGTTCTGTTATGCTCTTA
TTAATATTCTGTATAACGATATCCTCGACTACTGTAGTAATGCTAAAAAA
AACGGGAGAGTGTAGATACAACACGGGTTACATGAAACCAAACGACCGAC
ATACGTACGCATGAGGGTACCGTAGAGTTTCTCTGGGAACGCGTCCCAAA
GATGATGTCGATATACTTGTTACCACTGAAAGATATGACGCACATCTCAC
GCCTAAGAAAAACATTTTCCGTATATTGTGTCCCGCAGGACATTTCGATG
TATCTTCACTGTACGCTCACACCTAGTGAATCCCGCACTATGCACGTGCG
GTCCATGTACAGTAGTAACCTTGCGACTGCCGATCTGACCAGCCTGCAGC
GCAAATGGTGTCCCACAGCGTTGTCGCTTCTGGGATATGTCAAGAGGAAT
ACAATGATAGTACCTGTGTTCTCGCCAAATTAAGGCGTTTTTCAACTCGA
CAAGTACCGACCGTTGAACAGCCAGTAATTTTTACAGTCAATTTGCATCC
ACGCCGACGGTGCCTCTGGCTTTGCAACATATAGTAGTGAGGAATGTACT
AGGTCACAAGACCGCGTTGCTTGTTAATTTGCACTGTACTGCATGGCGCC
GCGTGAACCCCGCAGATGGACTAATTGAAGGCTGCGTATTGCAGCGTTGT
TTTTAGCTTGGTTTGTTTTTGTGTGGTTTCGCACATAACAAAATGATGTT
GAACTGCCCAAAAATTGCTAGTATCTCTCGTAAATTAGTTTCCAGTGCTT
TTCCTGTCGATGTGGTATTCTGCACAAGCACATGGCCTTTGCCATGTCAT
CGGCTTATGCCGCCGCGAAGGTTTTGCTTGCTGTCACCCACCGTATATGC
CTGTATATCTGTATATCTGTTGCATTTGCTCTGAGTAAAATCAAAATACA
CGACCGAAATCGCCAATGATTTGTTTTCAGTGCGAAGGTGGAGGAACGCG
AGAACCCCCGCCCCCCCATGCCGAAAAAGCCTACAATTTCGTTGCATTTT
TTTGTTTGTTTTATATAGATTGTAATATATATATATATATATATATATAT
ATATTACAATCTATATATATATAGGTGGAAATGAGTAATGACTAGTTTGT
ACGTTGTTGCTGAAAATCATGACTGGTCGTCGATTTTATGCGGTGCTGTC
GTCGGGCTGGATAGATTATCCGGCTGATTTTTGAGGTATTATGCCACAAT
ATAAGATTGCTTAAAATCTGAGTGCAGCAAAGACACTTTTTAGAGAGATT
TCCATAGGGGTGTCAATCGCGATAAAAAGCCAAAAAGACGGGTTATCATG
GAAACGCATGCTTTCTTAGGCCCGTTGGACTCGAGAATGACGTCATGTGC
TGCTTCTAGTCCCGTGTCCGTGGATGTTGAACAGCTTCTGAAACTTGATT
ATGATAACCAACGATTGATCGCTCCAGCCATCAGAAAAAAAAAATCCAAC
AATGTGTCGAGGCCCTAGTTAGTGACCGTTTCGTTTTTGAAGCGTTTTTT
TTTTTCCAGGGCTTTATCACAAGGGACAAAGGAGAGTCTATACATTTATT
TATATCTATTTCGATCGGACGAGCGGTGTGTAGCGGGACTCGCTCCCTTG
CCCTCAAGAAAACAGCAGGGCGTAACGATGATCCCGTCCCGTCCCCTGAG
GGTCCCGTGGTCCCGCGATAGCTCCTGTTTTTCTGATTTTCGCCTTTCCG
AGGGATCGTTCATTGCCCTATCTTTGTTGAGGGCGTGTTGTTCTCGTGTG
TGTGGTACTTACTTTGTGCTGTCCTCACGTGTGCGAGGCTCGATTGCAGT
AGTACCCCCCCCGCGCCCCCCCCCACCACTGGTGCTGTAATGATGTTGTG
TAAATATGTCGTACATACGAAGACATGAACAGATGTTGAGGAAATGCTAG
GTGTGAACGATAATGTTTGTATGTGGCATATCGAGCACAAAAAAAGGGTC
GACTGGTTCCTATAGTCCTTTTCGCTCTGCCACTACTGCAAATACGCCCA
GAAAACCTCGAAGAGTTGCATCCTGGCGGCAGTGTACCCCTTCTGTTGAC
CTCTCTTTTTTTGTATCTCTTCTTGTCACCCTTTTTGTTTCAGGGAGTGA
GCGCGGCGTCGTGCAGCTACACGGCAGGAAACGCACGCTGATACCGATCC
GAGTGTGCGCTCCGCCACCTTATCACAGACCCATATATATATATGTATAT
CCGTGAAAGTTAGAGCCGTAACAATGTAGCCGTCACCGAACGTAAACCTT
ATCAATTTTTTTTTACTGATATAGTGTACACAAATAAAGTCTAAGGTCAG
CTATATAACCTACCTCAACATGGGAACACTGCCCCCTCCCCCCCCCCCCC
CACTGCCCCTGAAATTGTCCCCTTGATTCGACTTTTGTTGTTTTTGGGTT
GTCCAGGTATGGGACTTGGGGCCTAGCTCAGAGGGTCGGCTATCACCGCA
GGCTCAGACGCTGCCAGGGGGGCACAGCGACTACGTCCTGTCTGTGTGCT
TCTCGCAGGACGGTAAGTACATCATCTCAGGCTCCAAGGACCGTTCCGTG
ACCATCTGGGATGCCAAGCTCATGAAGAAGGTTGGTTTTTGTTGGGTGTA
TCTTTTGGGGGGCGGGGAAGGGTATCACCCACCAAGGCGCATTCACGGGT
CAACCCACGTACCAGTTCATTGCTCTATTAAGGTGATACTGATGAGGGTG
GCTATGGTGGGTGGGGAGGGGCGGGGGGGGGTCGCTGAGCCATTTTTTTC
ACGTTTTGAGCCTTTTTTGGAAGCGGCTCGGCACGGTAAATTCTCCCCTT
CGAACAGTATGATGCTTCCGAAATGATGCTTTGTGCGCCTGCCTCTACGG
ATGCGTGAACGCACGTGATTGGATTGAATAGGTTTGAAATGTTTTCATTT
AGAGTTTATTTCGAGTCGCTTGTCGAAATGGTCTTTTGTGAAAGAAGTGA
CTCGACACACCCCTCGCCCTATGGTAGCCGGACTCTAATGTGATAACTCA
GCCATCATACCCCTGTTCAGGTTTGCAGCTGACCTCACGTCTGACTTGCG
TACACACATTACGAAATATTAAATCAAGTTGGGGGGGAGGGGGAAAAATA
TTTTTTTTTCAAGTTCAACAAAAGTTTGTTTTCGGGGCTTTGGGCTGTCC
TAGATTTCACCACGGAAACGTTTGTTTTTGCTGTACCAAGTGTAATTCGC
CAGCTAAACAGCTAGGATTGGAATTTTTGGTGGTGTAAAAATAGGGTGTT
GCTTTGGAAGTGCTGGAAAACCTGCGGATTCGGGAAGTAATCCGTTAATA
TACTGGGCTTCGGGTTTTCGAGTTTGCCGATTCTCTCGTTGCTGGTAATA
ATAATATGTATATTGCGGATGCTGTGCAGTAGATTGTGTGTATGTGTATT
TTTCTTCAGCGCACGTCTTTAACGGTAAAATAAAGACGTGTTCTGCAGGT
ATTCTCCTTTTGTTTTACTCTATTACTTCCTCTCTCTCTCACAAGTATAC
TCAGTTGCGATTATAGAGGCACTTGAACACCTCCAGGTGTTTTTTTTAGT
GGAACTGTACATTTTTTTTGGGTTGAAACCCATTTTGGGGTCAAACAGTT
GACTTGTAACACCGAAACTCTTTTTGAGGCGTTTGTTTTTGTCCCACAAG
TACACAATTTTGAGACGAGAAAACTATATCCGATAATTAAATATATATAT
ATATATATATCAATCAATAATTAGAATACGACATTTGTTTGGGGTTGAAC
CCCAAAATATTGAGTCGAATAGTTGACTTTTAACACCAAAACATACGCCG
TGATACAAAGTACTCGACCACAAAAGGGCCTTATGTCGGCCGAGTACTTT
TTTTCACGGCGTGCGTTTTGGTGTTGAAGGTCAACTGTTTGACCCAAAAT
AATTGGGTTTCGATCCAAAAAACATGTTCAGAATTCCATAAAGAAAAAAA
AAGGGAGAAGGTTACGTGCCTCTATAATCATAACTGAGTATATACTTCTG
AGACAGGGAAGTATGTAGATATGAAGATTTTTTTAAGGCTGTATCAAAAC
AAAAAGGGAGATTCGTGTAGGTTGACGCCTACGTTCGTGCAGTCCGTGGT
ATTTTCTTAATCCGCGTATAAGTAACATGTCGCTACACTTGGCAAGAATT
TAGGCACATACATGCGCCTGTAAATTCGCTTTCTAAAGTTTCTTGAGCAC
ATAGAGTTGTCCGGCAAAATATCAACACATCACCGCCCTTACTTGGGCTA
CATGCAACTCATTTTATCATATATATATATATATATATATATATATATTG
CTTATTGCTCGACACAGGTTGCCACCGTCACCGGCTTCAAGAACTCCGTC
ATCGGAGTGTCAGCCTCGCCTACCAACGGTATGTTCGCCACAGGAAGCGG
CGACAATCTCGTCTGCGTCTGGAACTACGGAGAGCGCCGCTCGACCTCAT
CGCGCCCGCCCGGCGCCGCCACCGCGGCCGGTACGACCCCCGCCCCCGCC
GGCACAGCGGGCAGCGAAAGGCCAAGATCTTCATCCCCGGGCTCGTCTCC
TGGAGAAGGTGGGAAGGTAGGCAACACGGAGGCCGACGGGGACGGCAGTG
ACGACAGTGACGGCGGCGCCAATGGGAAAGAGAGTGGTAAGAGCAAGTCA
GGGAGGTCACGGGGTGACGTAGAGCGAGGCGGCGGTGGCGGAATTGTGGA
GGAGCGCGGCGTAGCTGCGGCGGCGACGGCAGGTAAAGGAGAAGGAGAAG
GGAGTAGTAGGTCCAAAGAAGGCAGGGATAAGAACGATGGAGCAACGACG
ACGGAGGAGCAGGAGGAGGACGATGGGGCAACACCAGCAGCAGGGCGTAA
CTCCGCGAATAGTGGAGGCAAGGGG
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Coding sequence (CDS) from alignment at H-paniculata_contig5267:8649..13923-

>mRNA_H-paniculata_contig5267.12642.1 ID=mRNA_H-paniculata_contig5267.12642.1|Name=mRNA_H-paniculata_contig5267.12642.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1788bp|location=Sequence derived from alignment at H-paniculata_contig5267:8649..13923- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGTTGCTGCAGCGTCGATCGACCGCATCGTGCACGTTTGGTCTACCCA
GACACACGAGCTCCTTCACCGACTGGACGGCCACACCGAGTCTGTATATG
CCGTAACGTTCTCTCACGAGGGTGATCGGCTCGTCTCTGGAGGGCTCGAC
AAGACTATCAAGATGGTTGCTGCAGCGTCGATCGACCGCATCGTGCACGT
TTGGTCTACCCAGACACACGAGCTCCTTCACCGACTGGACGGCCACACCG
AGTCTGTATATGCCGTAACGTTCTCTCACGAGGGTGATCGGCTCGTCTCT
GGAGGGCTCGACAAGACTATCAAGGTATGGGACTTGGGGCCTAGCTCAGA
GGGTCGGCTATCACCGCAGGCTCAGACGCTGCCAGGGGGGCACAGCGACT
ACGTCCTGTCTGTGTGCTTCTCGCAGGACGGTAAGTACATCATCTCAGGC
TCCAAGGACCGTTCCGTGACCATCTGGGATGCCAAGCTCATGAAGAAGGT
ATGGGACTTGGGGCCTAGCTCAGAGGGTCGGCTATCACCGCAGGCTCAGA
CGCTGCCAGGGGGGCACAGCGACTACGTCCTGTCTGTGTGCTTCTCGCAG
GACGGTAAGTACATCATCTCAGGCTCCAAGGACCGTTCCGTGACCATCTG
GGATGCCAAGCTCATGAAGAAGGTTGCCACCGTCACCGGCTTCAAGAACT
CCGTCATCGGAGTGTCAGCCTCGCCTACCAACGGTATGTTCGCCACAGGA
AGCGGCGACAATCTCGTCTGCGTCTGGAACTACGGAGAGCGCCGCTCGAC
CTCATCGCGCCCGCCCGGCGCCGCCACCGCGGCCGGTACGACCCCCGCCC
CCGCCGGCACAGCGGGCAGCGAAAGGCCAAGATCTTCATCCCCGGGCTCG
TCTCCTGGAGAAGGTGGGAAGGTAGGCAACACGGAGGCCGACGGGGACGG
CAGTGACGACAGTGACGGCGGCGCCAATGGGAAAGAGAGTGGTAAGAGCA
AGTCAGGGAGGTCACGGGGTGACGTAGAGCGAGGCGGCGGTGGCGGAATT
GTGGAGGAGCGCGGCGTAGCTGCGGCGGCGACGGCAGGTAAAGGAGAAGG
AGAAGGGAGTAGTAGGTCCAAAGAAGGCAGGGATAAGAACGATGGAGCAA
CGACGACGGAGGAGCAGGAGGAGGACGATGGGGCAACACCAGCAGCAGGG
CGTAACTCCGCGAATAGTGGAGGCAAGGGGGTTGCCACCGTCACCGGCTT
CAAGAACTCCGTCATCGGAGTGTCAGCCTCGCCTACCAACGGTATGTTCG
CCACAGGAAGCGGCGACAATCTCGTCTGCGTCTGGAACTACGGAGAGCGC
CGCTCGACCTCATCGCGCCCGCCCGGCGCCGCCACCGCGGCCGGTACGAC
CCCCGCCCCCGCCGGCACAGCGGGCAGCGAAAGGCCAAGATCTTCATCCC
CGGGCTCGTCTCCTGGAGAAGGTGGGAAGGTAGGCAACACGGAGGCCGAC
GGGGACGGCAGTGACGACAGTGACGGCGGCGCCAATGGGAAAGAGAGTGG
TAAGAGCAAGTCAGGGAGGTCACGGGGTGACGTAGAGCGAGGCGGCGGTG
GCGGAATTGTGGAGGAGCGCGGCGTAGCTGCGGCGGCGACGGCAGGTAAA
GGAGAAGGAGAAGGGAGTAGTAGGTCCAAAGAAGGCAGGGATAAGAACGA
TGGAGCAACGACGACGGAGGAGCAGGAGGAGGACGATGGGGCAACACCAG
CAGCAGGGCGTAACTCCGCGAATAGTGGAGGCAAGGGG
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