mRNA_H-paniculata_contig5260.12637.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig5260.12637.1
Unique NamemRNA_H-paniculata_contig5260.12637.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig5260.12637.1 vs. uniprot
Match: D7G5I6_ECTSI (RRP7 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G5I6_ECTSI)

HSP 1 Score: 230 bits (587), Expect = 1.180e-70
Identity = 147/309 (47.57%), Postives = 173/309 (55.99%), Query Frame = 1 
Query:   22 VAKGYRVVPQRLWPAPVESPSSVPGVRPGAGYRYLHIKEHRGIFR--VTSGKNHGEAVKAREFAKGTTLFVGNVDDQGGRLCRKEIADRLRRAFSNCGHVSHVQISPPEGTDNHKTI-NGRGQAQVGKKAMLGSRFAHVSFSTADGVQAALALQGISSGTDLQKKCKKSRKRTREGAEDEESRDE---------NGDETLGYAGLIQRHRRNFLPRSELQAEVDTIMERFEDEEAEEAAKRKALLENPTDDDGFITVTYKKKRGRSV-------PLPVAADLAAANAAAGVKKKRKGAGSLPDFYRFQV 891
            VAKGYRVVPQ L  A         G     G+R+LH+KEH+G+F+  V++    G        A+GTTLFVGNVDDQGGRLCRK I  RLRRA S CG + HVQ+S          + + RG    G+K    +RFAHV FS+  GVQ ALAL+ + SG                                   NGDET GYA LIQRHRR F PR  LQ EVD  M RFE+EE+ E A+RKA+LENP  DDGF+TVTYK+KRGR+        P  V A         G KKKRKGAG L DFYRFQ+
Sbjct:    4 VAKGYRVVPQALADA---------GAGTSRGFRHLHLKEHKGLFKAAVSAAGGEGGRETTAASARGTTLFVGNVDDQGGRLCRKTIEARLRRALSPCGKILHVQVSAAASAATGGGVGDARGTTVTGRKHTGAARFAHVCFSSTKGVQRALALEQLPSGASTASATXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGDETCGYAALIQRHRRKFPPRKALQEEVDATMLRFEEEESAEIAQRKAMLENPEGDDGFVTVTYKRKRGRNSGGGTGNPPDGVVAG--------GAKKKRKGAGELSDFYRFQM 295
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BLAST of mRNA_H-paniculata_contig5260.12637.1 vs. uniprot
Match: L8HHU1_ACACA (RRP7 domain-containing protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8HHU1_ACACA)

HSP 1 Score: 61.6 bits (148), Expect = 4.160e-7
Identity = 81/277 (29.24%), Postives = 116/277 (41.88%), Query Frame = 1 
Query:  121 YLHIKEHRGIFRVTSGKNHGEAVKAREFAKGTTLFVGNVDDQGGRLCRKEIADRLRRAFSNCGH-VSHVQIS-----PPEGTDNHKTI----------NGRGQ----AQVGKKAMLGSRFAHVSFSTADGVQAALALQGISSGTDLQKKCKKSRKRTREGAEDEESRDENGDETLGYAGLIQRHRRNFLPRSELQAEVDTIMERFEDEEAEEAAKRKALLENPTDDDGFITVTYK-KKRGRSVPLPVAADLAAANAAAGVKKKRKGAGSLPDFYRFQ 888
            YL+I++HR   +V          +  E    +TLFV NV D         + D+LRR F  CGH V  V +      PP   D+H+             GRG     AQ          FAHV+FS+ DG++AAL     S+                  AE + + +  G        L++       P+  L AEVD  M  F+  +     + +A L  P D DGF+TV  K +K+     +P+A+  AA   AA  +++      L DFYRFQ
Sbjct:   98 YLYIRQHRAGSQVDDDPRGHHPTE--EAGATSTLFVANVGDDADAGA---VEDQLRRLFERCGHPVESVTLKSMRRVPP--ADSHRQXXXXXXRPAHQGGRGPWLEVAQADDAEARPLVFAHVTFSSPDGLRAALRYDWNSAAA----------------AESDAAGEAAGSGRGVNKWLLEYEEARPDPQRVL-AEVDAFMADFDRRQRLAEKEEEAALGKP-DADGFVTVRRKGRKKVADGGIPIASAKAAPALAAKAQRQESDK-VLLDFYRFQ 348
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BLAST of mRNA_H-paniculata_contig5260.12637.1 vs. uniprot
Match: A0A067QKC0_ZOONE (Ribosomal RNA-processing protein 7-like protein A n=2 Tax=Zootermopsis nevadensis TaxID=136037 RepID=A0A067QKC0_ZOONE)

HSP 1 Score: 55.8 bits (133), Expect = 2.100e-5
Identity = 74/246 (30.08%), Postives = 98/246 (39.84%), Query Frame = 1 
Query:  169 KNHGEAVKAREFAKGTTLFVGNVDDQGGRLCRKEIADRLRRAFSNCGHVSHVQI--SPPEGTDNHKTINGRGQAQVGKKAMLGSRFAHVSFSTADGVQAALALQGISSGTDLQKKCKKSRKRTREGAEDEESRDENGDETLGYAGL---IQRHRRNFLPRSELQAEVDTIMERFEDEEAEEAAKRKALLENPTDDDGFITVTYKKKRGRSVPLPVAADLAAANAAAGVKKKRKGAGSLPDFYRFQV 891
            K H    K        TLF+ NV       C K   D  +R FS CG V+ V     P  GT    T     Q       + G + A+V F    G+Q AL L        L   C K                    ET    GL    Q +       S LQ E+DT ME+F+DE   +A K K +++   D++G+ITVT   KRGR      A   +      G +K+R+    L +FYRFQ+
Sbjct:   30 KEHSVREKNSSKPTNRTLFIINVPP----YCNK---DCFKRIFSVCGSVTSVFFHQKPSAGT----TPPEESQFFTKCPRIKGFKVAYVVFEDNRGLQRALKLGENMKPVIL---CTK--------------------ETPILCGLQKWCQEYNNRIPDISLLQKEIDTFMEKFDDEAHRKALKEKEMMQE--DEEGWITVT---KRGRKPGF--ARKESVEKKIMGKEKQRRSKKELRNFYRFQI 234
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5260.12637.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G5I6_ECTSI1.180e-7047.57RRP7 domain-containing protein n=2 Tax=Ectocarpus ... [more]
L8HHU1_ACACA4.160e-729.24RRP7 domain-containing protein n=1 Tax=Acanthamoeb... [more]
A0A067QKC0_ZOONE2.100e-530.08Ribosomal RNA-processing protein 7-like protein A ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5260contigH-paniculata_contig5260:500..8512 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score236.5
Seed ortholog evalue1.6e-59
Seed eggNOG ortholog2880.D7G5I6
Preferred nameRRP7A
KEGG rclassRC00002
KEGG koko:K10872,ko:K13024,ko:K14545
KEGG ReactionR05799,R08964
KEGG Pathwayko03008,ko04070,ko04113,map03008,map04070,map04113
Hectar predicted targeting categoryother localisation
GOsGO:0000028,GO:0001701,GO:0001824,GO:0001825,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005730,GO:0005737,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0006996,GO:0007275,GO:0008150,GO:0008152,GO:0009653,GO:0009790,GO:0009792,GO:0009987,GO:0010467,GO:0016043,GO:0016070,GO:0016072,GO:0022607,GO:0022613,GO:0022618,GO:0030684,GO:0030686,GO:0031974,GO:0031981,GO:0032501,GO:0032502,GO:0032545,GO:0032991,GO:0034456,GO:0034470,GO:0034622,GO:0034641,GO:0034660,GO:0042254,GO:0042255,GO:0042274,GO:0043009,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044452,GO:0044464,GO:0046483,GO:0048646,GO:0048856,GO:0065003,GO:0070013,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:1901360,GO:1990904
EggNOG free text desc.ribosomal small subunit assembly
EggNOG OGsKOG4008@1,KOG4008@2759
Ec32 ortholog descriptionRibosomal RNA-processing protein 7
Ec32 orthologEc-22_000790.1
EC2.7.4.24
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03009,ko03400
Exons5
Model size891
Cds size891
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5260.12637.1prot_H-paniculata_contig5260.12637.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig5260 500..8512 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930527.4137459-CDS-H-paniculata_contig5260:499..7451622930527.4137459-CDS-H-paniculata_contig5260:499..745Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5260 500..745 -
1691481332.9091525-CDS-H-paniculata_contig5260:499..7451691481332.9091525-CDS-H-paniculata_contig5260:499..745Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5260 500..745 -
1622930527.427101-CDS-H-paniculata_contig5260:2274..23621622930527.427101-CDS-H-paniculata_contig5260:2274..2362Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5260 2275..2362 -
1691481332.9258327-CDS-H-paniculata_contig5260:2274..23621691481332.9258327-CDS-H-paniculata_contig5260:2274..2362Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5260 2275..2362 -
1622930527.4406407-CDS-H-paniculata_contig5260:3404..35301622930527.4406407-CDS-H-paniculata_contig5260:3404..3530Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5260 3405..3530 -
1691481332.9337585-CDS-H-paniculata_contig5260:3404..35301691481332.9337585-CDS-H-paniculata_contig5260:3404..3530Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5260 3405..3530 -
1622930527.4576137-CDS-H-paniculata_contig5260:5044..52281622930527.4576137-CDS-H-paniculata_contig5260:5044..5228Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5260 5045..5228 -
1691481332.9416363-CDS-H-paniculata_contig5260:5044..52281691481332.9416363-CDS-H-paniculata_contig5260:5044..5228Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5260 5045..5228 -
1622930527.470983-CDS-H-paniculata_contig5260:8265..85121622930527.470983-CDS-H-paniculata_contig5260:8265..8512Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5260 8266..8512 -
1691481332.9499207-CDS-H-paniculata_contig5260:8265..85121691481332.9499207-CDS-H-paniculata_contig5260:8265..8512Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5260 8266..8512 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig5260.12637.1

>prot_H-paniculata_contig5260.12637.1 ID=prot_H-paniculata_contig5260.12637.1|Name=mRNA_H-paniculata_contig5260.12637.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=297bp
MSGPAPTVAKGYRVVPQRLWPAPVESPSSVPGVRPGAGYRYLHIKEHRGI
FRVTSGKNHGEAVKAREFAKGTTLFVGNVDDQGGRLCRKEIADRLRRAFS
NCGHVSHVQISPPEGTDNHKTINGRGQAQVGKKAMLGSRFAHVSFSTADG
VQAALALQGISSGTDLQKKCKKSRKRTREGAEDEESRDENGDETLGYAGL
IQRHRRNFLPRSELQAEVDTIMERFEDEEAEEAAKRKALLENPTDDDGFI
TVTYKKKRGRSVPLPVAADLAAANAAAGVKKKRKGAGSLPDFYRFQV
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mRNA from alignment at H-paniculata_contig5260:500..8512-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig5260.12637.1 ID=mRNA_H-paniculata_contig5260.12637.1|Name=mRNA_H-paniculata_contig5260.12637.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=8013bp|location=Sequence derived from alignment at H-paniculata_contig5260:500..8512- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGTCGGGTCCAGCCCCAACAGTGGCAAAAGGCTACCGGGTGGTCCCACA
GCGCCTGTGGCCTGCGCCTGTCGAAAGCCCTAGTTCGGTGCCAGGCGTCC
GGCCCGGTGCTGGGTATCGCTATCTGCACATCAAAGAGCACAGGGGAATA
TTCAGGGTCACTAGCGGAAAGAATCATGGAGAAGCGGTGAAAGCGAGAGA
ATTCGCCAAGGGCACCACCCTGTTTGTTGGCAACGTTGACGATCAAGGTG
TGGACTCATCTGGTGTAGCGTGTTGGATGTACTATGTTACCCTGGGAGAG
AGGTGTAAATGTACCAATTTCATGCGATGTACCAATTTCACAGTGCTGAG
AAGTCTTGTACTCTTCGTTATCACCCTAATGTCTGCTGCTACTATTTGTA
ATCCTTCGTCTCTGTTGCGTTGCTGTACTGAGTGCTTACTGCACAAATGC
TGTAATTTCTAATTCCCTCCTCCATATGCTGCAGTACGTAAAAGTAATGG
ACCTCAGTTGACTTGACTGTACGCTTTAGATTGCATAGCGCGATTGTCCT
TTCAGTTCGTGGTCGCTTCTTATTCGATAGATAAAGATGAGCTCGACCTT
GCAATCGAGACTCGATTCATAGACTTGAAGAATTCACGTTTGATTTCTCC
AACTGCGTAATCACGGCTCCCTGTAATCTATTACCGTGGCACAATCATGC
GCCTTCTTTCGACATCATATATTTATTATCCCATCATCATCATCATCTTG
ATTTTGTGGTAAATGTTTGTCGTGGGTGTTTGTATGAGCGGGTGCCGGTT
TCTCTTTGTTTTTATATATCTGGAACTGTTATACAAAGCCAAGATCTTTA
GTCCCATCCAACAGCTTAGTGATAGTTACTGTGGTTGGTTTCATGCACCT
TGTCAATCAGCCACACCATCACTAGTAATGATTGTGAAGTAGGCACATGG
AGTAAATTTTCTTGAGTGACTGTTTTGCTCTATTATTTCGTATGTTCAGA
CAGGGTCTTATCGAGGCAGCTTTGAAGTGATTTTAGATCATTTTTCAAAA
CCGATTTCACAATCGTATTTCGTGGCTTAATGAGCCGTGTATCATGGCAT
CGAGAAAAAAGAATTGGCAATGAAGTGGTGTCGACACACGATCCAGAATT
GCTTTCAGGGTTCCCGACATGACCCTGCACTAGCAGGTCTCGGGGATCTA
CGAGCATACCTGTCCGGCAGTTGAAATAGTCTCGCACACACCTGCCCAAG
ACCAATAGGTTAACTTTTGCCGGTAGACCGTGGGCATATCAGTTGCGATC
TCGGGGACTTGTTGACTTCGTGAGTCTTCAGCAGCCACCGCGGTTGGTAA
TGGGCCCAGTGAGAATTTTTGACGGCCACTGTGGTCGCCTAAAGGTCCGA
CCTAATCTGATTGGGGTGTTCGTCGTTTTCGCTTTTCCATTGGTACTACG
CAGTTTTTGTTTTATATGTGCAATCTATTTACTCCCGTGGCATATGATCG
TTGGTCATACCAGCAAGAGGGTGCTCGCTTGGGCCTCGTCATGTTGACCT
TTAGTGTACTGATTGCTACAGAAGTATCGAATCTAATGCCTCTAACCAGG
TCTGAACGGTGGACTTGACATGTTTTAAGAATCCACCTACTAGCGGAGAC
TAAATGCAGACAAACCGGTAAACTTCTCGCCCTTTATCCTGGTTTTCACG
AACGTCGAGCTGAGTGACTTTCATCGAGTTCATGCCAAACGCCCCCAAAG
GTTGAGGATAGTTACACCATTTGCCATTTGAGTTTGAGAATGCGGGCGTT
GCTCCCACCTCAGCATGAAGAAATTACTTAGTTTCAGAGGGATAGCAACC
TTGAGTTTAGGACGCAGTATTTACATCGCAAACCCGCGCCAAAGGCACTG
TGCGTGAAAGCTCGCTATCTTCGGTATAAGTGCAAAATAAGACAGTTTCT
TATGAGAGCTTGATGTTTGAATTTGATTATTTGAATTTTGCGAAATTCAG
AACCAGACAACAGGCCGCTTTCGAAAACTTTTGCGCAAGCGGACAGCACA
CACAAGTGCTGGCCTCGTAGATGAGCGATTGGAGCGGAATATTTTACGCA
ATCTACCGACAATGCTGTTATCTGGGCTGTGCCAAGTTTCAGCAAATGAC
CTACGCCCGAACTGGTAGGGTAGCTCGTGAACTGAGCATGACTGGATGTC
TGGTCAGAGGTCTTTTAGTGGGTGTAACCCCCAAACTGCCTACCCGGTTC
GGCCGAACCGGGGGGGCGCCTACCCCGCAGAGGAAAAATAACGCTGTTTT
GTTGAAGGAAATGTAGAAATACTTTCGTAAAATACTTGAGTATGGAAGCA
TCTGTAAAGGTTTTTGCCTCAGTCTTCCGGGGGTTAAAAACCCCCCCAAA
AATGGTGTGGACCAAAGCTGTCGCCCTTCCCATCTCGACACCATCTCGAA
AGGGAATAAGTATCACACGCAGATCGGCCTGCCGTACAATAATATGTGAA
AATCGAACGGCTCCAATTTTTATACGCAAGTTTCAAATGCCCATAAGAAG
GGGCGGCAGTAGGGTTAGATCAAAGTTTGTTGGCAAGAGGGTAACCACGT
CCGTCCTACTTGAAATGGAGAAAGCAAATATGACCATGTCTTTCGACCTG
TTTTGTAATGCTGGTGGTGTTGTTGCACTCCAATCTGCATAATTGTATCA
CTTCAAGTCAAGTCACCAGTATGGTATGCACGTATTCAGCAATACACGTG
CCCCACAAATAGTCGAGTGTTGCCTCTTACTCAACCTCTTGTCGAAGTCG
AGTTATCCGACTCTTTTCTGTGTTTCGCGCGTGAGAGCATGTATGTCATT
TGGGATGATGTCATGTTGCCTCCTGGCGGAAGCCTCCGTCGCGGTATATA
CTTGCATTGACCCCCTATAATCATCGACTGCCCCCCTGTCCCGGTTGGTG
CCGAAATACGCGAGGTTTAAGGTTGATGTGGTACGTGAAATATTTCTGAG
CCACTTTTGGCAGCGGAAGAAAGAACGATTGGTCGTAGGAAAATCAATCT
GAGGAACAAAGCTCAGCTCTACCGTGGACCCGTGATCAATAGTCTAACAA
CGACGACATGCAAAATATGAACCCCCACCCCCCACCCCCCGCTTTCTCCC
ACGTCCCAGTGCACACTTAATTAGGCCTGTAATGCCCTTGTACTCGCTCT
TTCTTCCCTATCTCCTTGTGCCCACAACACTTCGCTTTCATGCCCACGTC
GTCCTCTCTCGTGGATAACCATCGTTATCACCAGGAGGGCGCCTCTGTCG
GAAAGAAATAGCAGATCGGCTTCGCCGCGCGTTCTCGAACTGCGGACATG
TTTCTCACGTGCAAATCTCCCCACCAGAAGGCACCGACAATCACAAGACA
ATCAATGGAAGGGGTCAAGCGCAAGTGGGGAAGAAGGCGATGCTGGGCTC
GAGGTTCGCCCACGTCAGGTGTTTCATCATACATGCTTTTTCTACCGAGA
GTTGACCACAGAGAACACACTTACTTAAAAAGCCTTCACGCGTGACGTGG
CCGAGGTTTTGTTACGGTCTATGAAGTCGCATTTTTCTCCTCGTGATGTA
GATCGAAGTGACTATCGCACCAGAGACTGAGCATCCCATGACGCGCCGTT
GTTTTTGGGAATGTCCACAGTAGTGGAGCAAATTGCGTGTGATGAAGTTG
AAATATGCACATCTCCATGTAACAATGAAGGTCGATAAAGGTTGTCGTGG
AATTTGGTACGATGAGAGCATGAGGGTCCGTGACGCCTCCCTAAACCCCC
TCGATTTGGTAGCTGAAGGTTCTTCATTGCGTGGATGTCCGAACTTGAAA
ATGAGCGCACATTCACACATTTCCTCACTTCATAGCATAAACATTGCCTG
AATATTCAAGCTTCCATGAACAGGTTCTCACTTGAAATGTTCAAAGTTTT
ATCCGATCTATATCGGGAATGGTTCAATCATGGATACCGACAACCCCAAC
TGGGACCTAGTCGCACCGGATATCGCGACTCGGTCTACTTGATAGGGATT
AGATCATCGGTAATTTTTTTTGTCTCAGCCTTCGGGGGGTTGAAAAAAAA
CGGACAATTTTACCTTCATGGTTGGATATTTTATTCCATACCCATGTCGA
GAACGTGTGCCGGAAGACCTATACTTGTTGACAACGTCACTCCCTCTTTG
GAACCAGCTCCTCGTGTCAGAGCCCTGGACCCTGCAGCCTCGGCTATGCG
GGGATTGAAGGTCGGCCTTGAGTAGGACGCTAAGAACAATTTTTCCCGGC
GGTGACAACATCCCCACAACTGCCAGTCCTCTTCGGTCTTTCTTGCAGTC
GCTGAGCGTTGGCACCGTTGAACATATCCATTTATGTAGATGATGTAAGT
AGTACTAAGGTTGAATCTAAAGTGCGTTTTCATGTACTTAGACGTCACGA
ACAGTAACCGAATGGTACAAGTCACTTCGCCAGGTATTATAAATCCCACT
CGACGCAAGTAGGGTGAGGTTACTCCACGACCTCGCAGTGATCGAGCGGT
GGGTTCAGAGTTCCCTTCGTGAGTGTACGCTAAGTGCTGAGGTACAGTAC
ATGGCAGAACGAGGTGCCTCGAGAGAAATATACTAATTAACAGCGAGGGA
GCAAGGCATGAGCCTTTCCTAGCCAGGCTAAGAGTTATCATCTGTCATCT
GGATATGTCAGCTGAACACTTCATGAAGGCGCTGCATCAGCTGCATGTAT
CATGCCCTGATAACATATATGCGGAAGGTGACACATGTCACGAAGATATG
AGAGTACTGAGGCGTGATGGAACTTGCGCGTACATGGCAACAACACTATC
TTTTTCAATTGTATTCAAGGCTTTCTCTGACTCTAATTAAGGGAGACTGC
CACCTAAATGTATTCGCTAGTGTCATGTGTGTCGATGTTTTCAAGGCCTT
TTTCTCTCGATGCTCCCCCTCCTTCATCGCAGTTTCTCAACAGCAGATGG
CGTTCAAGCGGCGCTTGCTCTGCAGGGCATTTCATCCGGCACCGATCTTC
AGAAAAAGTGTAAAAAGAGCCGAAAACGGACTCGGGAGGGAGCCGAAGAT
GAAGAGTCGTTGCCCTCAGCGAAGGATTCAGAGCCAAGTTTGTAAGTCGC
TCTCTACCCCCCTTTCCCTTGTTCAACTAAAACGTGATGTAGGAAATAGT
TTTATTATGCTGTGTGTAGCTGGTTATATCGAACCTTTGATTATTTCTTT
CTATTCAAATTCTCGATTATACAGGTATCGGATATCATGTGGAAATTCGT
GTGTTTTGATATTCATAAATGTTTCGCAAATAGATTTAGTTGTGGTTAGT
CCTTTTCCTCATATTTAAGGTACTGGCGCACCTTCTTTGGAATTGGTCGC
TATCGATCAACAGGACATGGTCGACTCCACGAGTACTACGTAAAACACCA
TTGCCACCATCCCTGCTGCACGCGAATGCCGCCTACTGTCTGTCATCTAA
TCCTATTTAGTGGAGAGCAAAATTTGTGGCAAATGGACAGGAAAATGGTT
CCAGCCATGAATTCCGATTATTTTTTTTTCCATGTCACCTCAGGGCTTGG
GATGTGCGGGTACAGGAGAAGAAGTGTTGACTCGCTGTCCAATCGTTTTA
CTTTTTTTTTCGAGGCAGCAGTCGTGAATGGTCTGGGGCACATGAACTAA
GTGTGCTCATTCTGAACCGGCTGGTGAAGAGTGTTGGAATTCCATGGTAA
AGGAGTCAAGTACGGCTAAGTCACGTACAACGGCTAGCCCACAATATGCC
CTAGGTTCAAGCAAAGAACCGAAGGGCTGACAGACTAGACAACACTCCCC
GCGTTCTGCGGGGTTCGAGAATCGGGACACGGTAAATTCTATCGTGTTGT
GGGCTCAAGCTCCTTCCCTCACAACGCTTCTAAGTCGTAAAGGTGATTCT
TTACGCTTTGGGGTGGAAAGGAAAGGGAAGGAGTCAAGTATTCGTACTCG
TCTCGGCGGGTTGAGAGTTTAGTTGATGGTATGTACCTGAGGTCGTTCAT
ACGCCAGTTCCGGCTCGGCCCGTTACCCTCCGCCCTCTAGACAGCTTTTT
CAGCAACCCTAACTAATTGTGACACAATCTAACACCAAAAACGTGACGAG
CAGGGATGAAAACGGCGACGAAACTCTTGGATACGCGGGACTCATCCAGC
GACATCGACGAAACTTCCTACCAAGATCGGAGCTTCAGGTGTGTATTTTG
TGAAGCTTCGGCTTTTGTTTTCGTTTCATCGTTCCTCTCCATGAATCCTT
TGCTTTGGTTCTGTGATTCCGTCTTTTACCTTCTAATTTTTCGTCCCGTA
AGTGGATCGTGACGTCTTCTCGCAAAGAAGTTGCTATTTTTCAGCCTTGT
TTTTGTTTACCCTATACCGTTGGAGTTTTCCCATCCGTAATTTCTCGTTA
GCACAGCTCCTCGTGTCAGAGCCCTGGACCTCGCTGCCTCGGCTATGCGG
GGGTTGAAGGTTGGCCTTGAGTAGGACGCTAAGAGTAATTCTTGGCAGTG
ACAACATCCCCAAGGCTGTTCGTCCTTTTTGGTCGCAGTCGATGAGCGTT
GGCACCGTCGGACATGACTTTTTTTGTAACGTTATATATCGATAGGAGCA
ACTGGTACTCGTCTGCATCGTTTCTACGCATGTTGAGCAACATGTAGATC
TCTACTAGAAAACAACTGTCAAGTCGTGTACGGCCTTGTCTTTACGTACT
TCTCACAGAGCCAACCAGACTAGAGATGTGAATGCGAAGACTCGCGAATC
AAACTATGTTTCTTCCTCGCTCCCCACCTCTTCCCGTACTTCGTTGGATG
GATATCCAGATAGGCAAACTCACTTTTTCACACTCTGCCCCCGGTTGACT
TCTCCTCAAGTCACACCTAGTGCGCTGCCTGTGCAGCACATCTGCTGCAA
GAGCAATTATGGAAATAAGATGAGAGAATCACCATGTGATGCAGACGGTA
AAAGGTCCAAGCAGCGCATTAGAGGCTTGACCTTTTTCGTTTCGTCTTGT
TTGACCTTCGACACAGAACAAGTAGTAATTGCCTTCAACTTCGCCGTACA
AGACGAATTATTTATCAAATGTTGGAAGTTTCGCGAGTTTGAGCGGGCGA
AGAGGAACTCGTTTTGTACCAAGAGTTGGGTGTAGGTGAACTGCTGTCCT
GGACTTGTAGCTCACGATGAACCGTACACGACCAAATCAAAATCTCCCGA
TAGAGATTTGTTTTCACCGAACACATGTATACCGTGAAGGCGTTTGAGCT
CATAACCTCCATATTAACGGCCCCTATTTATCTCAAACTGCGCATGTTTC
TAGTACACGAGGTTAACTGCTTTCAGAGAATGTCTTCCACCGCTTGACGT
GCTTGATCGACATATGCTCCCGTTCCCCCCCTGCACCATCCTCTGGGAGA
CATGTGGTCAATGATTTCACCAACTAGTACTATTGCGTACGAAAAATGAG
TATCCCTTTTTGGGGATTATCAACTCGTGTGAGTATATAGATAATCAATC
ATGACTTCGGGCTTAAAACTCTCGGCATAAAGCGGGTTCATGTATAACTG
CTGTGAATGTGTGTGGGCAGCTCTAATCATATGCCCATCTTTGCTATATC
AACCTGCGCCTGAATACGTGTCGATATGTTTGGAGTTCGTGATGTGTAGT
GTCGTCCTGTGTACTAGTTGTCTTACACACGTGTACCCGCCCTCCTCTCC
TTGTCCCCACGTTGAAGGCCGAAGTGGACACAATCATGGAGCGGTTCGAA
GACGAAGAAGCCGAGGAAGCGGCAAAAAGGAAAGCTCTTCTCGAAAATCC
TACCGACGATGACGGTTTCATAACCGTTACGTACAAGAAGAAGCGAGGGC
GTAGCGTTCCTCTCCCGGTGGCCGCGGATTTGGCGGCAGCGAATGCGGCT
GCGGGCGTAAAGAAGAAGAGAAAAGGAGCCGGTTCTCTGCCCGATTTCTA
CCGATTCCAGGTG
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Coding sequence (CDS) from alignment at H-paniculata_contig5260:500..8512-

>mRNA_H-paniculata_contig5260.12637.1 ID=mRNA_H-paniculata_contig5260.12637.1|Name=mRNA_H-paniculata_contig5260.12637.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1782bp|location=Sequence derived from alignment at H-paniculata_contig5260:500..8512- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGTCGGGTCCAGCCCCAACAGTGGCAAAAGGCTACCGGGTGGTCCCACA
GCGCCTGTGGCCTGCGCCTGTCGAAAGCCCTAGTTCGGTGCCAGGCGTCC
GGCCCGGTGCTGGGTATCGCTATCTGCACATCAAAGAGCACAGGGGAATA
TTCAGGGTCACTAGCGGAAAGAATCATGGAGAAGCGGTGAAAGCGAGAGA
ATTCGCCAAGGGCACCACCCTGTTTGTTGGCAACGTTGACGATCAAGATG
TCGGGTCCAGCCCCAACAGTGGCAAAAGGCTACCGGGTGGTCCCACAGCG
CCTGTGGCCTGCGCCTGTCGAAAGCCCTAGTTCGGTGCCAGGCGTCCGGC
CCGGTGCTGGGTATCGCTATCTGCACATCAAAGAGCACAGGGGAATATTC
AGGGTCACTAGCGGAAAGAATCATGGAGAAGCGGTGAAAGCGAGAGAATT
CGCCAAGGGCACCACCCTGTTTGTTGGCAACGTTGACGATCAAGGAGGGC
GCCTCTGTCGGAAAGAAATAGCAGATCGGCTTCGCCGCGCGTTCTCGAAC
TGCGGACATGTTTCTCACGTGCAAATCTCCCCACCAGAAGGCACCGACAA
TCACAAGACAATCAATGGAAGGGGTCAAGCGCAAGTGGGGAAGAAGGCGA
TGCTGGGCTCGAGGTTCGCCCACGTCAGGAGGGCGCCTCTGTCGGAAAGA
AATAGCAGATCGGCTTCGCCGCGCGTTCTCGAACTGCGGACATGTTTCTC
ACGTGCAAATCTCCCCACCAGAAGGCACCGACAATCACAAGACAATCAAT
GGAAGGGGTCAAGCGCAAGTGGGGAAGAAGGCGATGCTGGGCTCGAGGTT
CGCCCACGTCAGTTTCTCAACAGCAGATGGCGTTCAAGCGGCGCTTGCTC
TGCAGGGCATTTCATCCGGCACCGATCTTCAGAAAAAGTGTAAAAAGAGC
CGAAAACGGACTCGGGAGGGAGCCGAAGATGAAGAGTCTTTCTCAACAGC
AGATGGCGTTCAAGCGGCGCTTGCTCTGCAGGGCATTTCATCCGGCACCG
ATCTTCAGAAAAAGTGTAAAAAGAGCCGAAAACGGACTCGGGAGGGAGCC
GAAGATGAAGAGTCCAGGGATGAAAACGGCGACGAAACTCTTGGATACGC
GGGACTCATCCAGCGACATCGACGAAACTTCCTACCAAGATCGGAGCTTC
AGCAGGGATGAAAACGGCGACGAAACTCTTGGATACGCGGGACTCATCCA
GCGACATCGACGAAACTTCCTACCAAGATCGGAGCTTCAGGCCGAAGTGG
ACACAATCATGGAGCGGTTCGAAGACGAAGAAGCCGAGGAAGCGGCAAAA
AGGAAAGCTCTTCTCGAAAATCCTACCGACGATGACGGTTTCATAACCGT
TACGTACAAGAAGAAGCGAGGGCGTAGCGTTCCTCTCCCGGTGGCCGCGG
ATTTGGCGGCAGCGAATGCGGCTGCGGGCGTAAAGAAGAAGAGAAAAGGA
GCCGGTTCTCTGCCCGATTTCTACCGATTCCAGGTGGCCGAAGTGGACAC
AATCATGGAGCGGTTCGAAGACGAAGAAGCCGAGGAAGCGGCAAAAAGGA
AAGCTCTTCTCGAAAATCCTACCGACGATGACGGTTTCATAACCGTTACG
TACAAGAAGAAGCGAGGGCGTAGCGTTCCTCTCCCGGTGGCCGCGGATTT
GGCGGCAGCGAATGCGGCTGCGGGCGTAAAGAAGAAGAGAAAAGGAGCCG
GTTCTCTGCCCGATTTCTACCGATTCCAGGTG
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