mRNA_H-paniculata_contig526.12635.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig526.12635.1 vs. uniprot
Match: D8LPQ5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LPQ5_ECTSI) HSP 1 Score: 1258 bits (3256), Expect = 0.000e+0 Identity = 1122/2931 (38.28%), Postives = 1430/2931 (48.79%), Query Frame = 3
Query: 36 MEAIMLTVDRLVDALNGEDPGGARMYMAQLRDKEAQTLLQSFQEVLVGNLSPSPSSTNSLFGGGRGSGGLSFNRSSSAPSAYPVPPSEFLKVLLEGNVTRLRALHAVLQAMGRGDLQGRAASLCLSELRMCLAACSAPPGGSSSSRNGYTVDNLLIPNGHNGLRELADVCLSFIVGPASAATSGKRSRAT--SDADNSAERNNRRLVMLDALPAVLGACCAAAACEESEYXXXXXXXXDDTGEGIAPCGASPELDSGLTG---------------------NKRKGKGKTPANEDSCTGSGGXXXDRGDDRNDWKEQRTPHTDSGSLLGTGAGRRPR-CVEDMLPERAAEVMVEVTSALLDRPWAPQLALPLLRMFEEVSDLVEALE----EYYTDCDEGGXXXXXXXXXVTALGASAVGRGAGMGVWARVRSRLMECVWMGGLDGTDFTGVVQQVCILCEADIRRNWEKENGRPNHSLRHDKNGARPQSNAAPHAAATFT--------SAKEHRNCDIDGLGGPSWDRRQATTQGASIPNGGDWLSCLRRLYAAVPPDSLSTVELVLEQTLHQMPDVAESLLDDIQRRTGGDSAAAGAAVGVRRRSNRGIDPKNDGAPWTVGETPQKSALERGPSRKRSGYGHGVGSKNADSKSGTGSATEHLITHDLGLLLLLLREAAPLRACSLPLLPNDADRGRRAEDGVQLLLLSVAHRGFEGRWHMDHLALRRSPGGGGGGRVCTASKSGCRELGDPWSPLVIREGRVGAAASVRAVVKGVLCNETGSGARGGGXXXXXXXXXXXX--------YEHELESSSVASERASQLFELALRWLEEGDEGRSGSG-------GGGCILGVEELAAETISVVFDVVPGARPRLLRSLLSGVLDGSQGGVACARGYLSAWETLMAQEGRVQCRQLAPHSQVVSDVLGRLTLLPQDRAQRVVESMIPLADACRSHASALISLCRKCAAQGGTKGRRLALHAVTCILVWNVRRAIAGGAKDGCLNQEGVQEDLIGMFRRAMEGGLETAARAEALHLLTSRLFARPSSTASPYVSLVGVAAVGAMPEARREHGPPLEQPAAAAATMGVDV------TVLGGLRHLLADRLYRFLVHKDEIIVGXXXXXDNSPAPFDGSHCGRPGTPSGRYGRSSYGVGDGADVDRGKGKGKKLSRVLIAGRYQFAPLRLLEGRRPSTGPTGSEGGGRGSSTGLRYGGSGNGISKSAHGYGGAGWEAVVPRDAIGQLLKCCWALVPLSTGVERGGSKWPSEAAARAAAGGAILAPGDAATGKQAEAEVVARAVLGLGPSWLEGDRGAPGRAGKPTRGFVGAIGAGTLEGEALLAVVEFLASGGVMETVRVI-PSWPKQASVRRDDGDVFESDGDSCRAAHPSQCHPGLVGPLPALAIVVTVAEAMVDCLLNS-------ELTVAASNGAVSRVR-------GDTAVKCNGRYQQQQPLLIFWAAADTFTLLAAAARVTEGLGGASGGM-KQSKFRPHEGLSAVIASLTGQTQGLSHRGSSFSNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHGSEAPCPLFSTYSAFVFVKEFLDWVAAREEVRTAVESIGEGWDGGVGVWLGLTHSVRTLAQVLESATKNSSQTAAQAEMSWHGGXXXGDDIPVEGQATRCEYPSCESAALAIFELRRVVGSPSAAARVHGGSAAMPSAAGVPWMPKSWSTAPSGARDEPTQNGSSKFDQSDPFY-SLRPPPGAMVTGFLKRMSERWKVHLDWGLPGLTPPTRASPRLEHSNRRRRGFYDDSEDGAAGRVGGYLPEGLREEAGDLFYTLRGELLRAERLALSVLLHGSSSTHTSKLWVVRAALATSAFRTTDDARKSAQGGLGRQNSTVTGSLPARFEKCLDDRSGGKAPLADDSGGRPGGGRGGEEPEAGSGPARRAVTVNGMLKTLEGRRRESVERCGGISSSDG-------GGGLATAR----GGAQDSCGSRRDKEGEEE-EVGEGLGTLCRYAALELREGLENGLSVKLTQAYLDLVELFGNAALEHLRRTKRSDITPHSTSPHPTVNAKLQESRVAAASASGY-DHPTNGETKLGVRQESEERVDDAGEVLFSVLTCHCVNQVSLFQRLVRGAVQFEGVGVRRRHRRCRRHQ---------------------------------------------------ERCSRLLVHCVRWMRRRQGXXXXXXXXGYITEVDGKESGEEAAVGAGR--------DASGACGSGEDDTDAGRKSTGTVDSTDGHDDSDSGTYNSQPEAVIIATPRECYAALTRVLAEHEAALMSSLGSFGGSGAGRGAVGFLLGGGAFSPMGVGAEVGEVLAVVAGGLRQFFVTSTTGVSATTTAVRVRNKGETGTTADSEGGDVAAEVSNLDAASTRREADELSTNVNTKDKTLAAAASSTRGQSVAVVSILPETMKLRLMQLLERVYLTGRAVSLIAYGALMKPPPTAVLRTDDRPPETRVKPEAFPCPVSCVLSPSTLSCAPPPATPSPVVVSVPPSSKRRRPNQEDSIT--KPGDQAAGVGRPAKLQVVARKVSTRYSARNSNRECSAEKSESKAGVQVPGR--VIEVEGKLSGGGGEAKSMLTSVAGLLAHGKREEARREEGEREMPEAAR-RLLEVVSPAAVAASGHCLELMSAARGWAEAERAQTRRAGDDPCRKKASTLLFKIDRCELEMSKAARMARQYLDNFHDDSDKLDRHCGAKASGRSG-MKGNNSRLGANRRDKIGNDGDDSR---MGWGGGTGKVANNGRNEKLERALRTLVAGANTLAARRRESAAAGDRGNSRKTGSHKR-KGRNSSSGGVGSPSRRKNDGLRGRQRRTTDERCLASGKQGRRRSRGVTRVRSRNTVIDGWLEETREGETNGADAFVDLEDFI 8360
M+A ML VDRLVD ++GEDPGGAR+YM+Q+R+ E ++L+ F+++L G L +P S++ N +S AY VPPSEFLKVL+EGN TR+ ALHAV+QA+GRGDLQGRAASLC+SE+RMCL+AC+ G ++ R + +P LRELA VCLSF + SA SG+ + + + NNRR++ML A PAVLGAC XXXXXXXX RKGKGK+ + GD + R+ SG ++ G G E LP+R ++ +VT ALLDRPW +LALPLL MFEE+ LVE LE E E G G + G+ + VW RVRSRLME VWMGGLDG DFTGV++QVC+LC+ D RRN+E + + LR + +G + AP AA + + R DG+ G RR T+ +S GG W+SCLR+LYAAVPP+ +STVELVLEQTLHQMP VAESLLD IQ + A GV + G +T I+HDL LL+LLLREA+PLRACSLPLLP DRGRRAE+GV+ LLL A GF+GR + SG ++ + GR GA S RA+++ VLC+E G G XXXXXXXXXXXX + + ESS V SERASQL ELALRWLEEGD G G G G G L ++++A+ETIS VFD V ARPRLLR+LLSG+ D SQGG ACA Y+ AWE LMAQE +CR+L PHSQ VSD LG+LTLLP+ RA+RVVESM+PLAD C + ASA+ISLCRKC+ QG +KGR L LHAVTCIL WN RR G GCL+QEG+QEDL+GMFRRA EGGL+T ARA+ALHLL ++L + + + AMP + Q + A AT+ VD T L GLR L+ RL+RF HKDE++ +S A G + G P PSG Y D + R KGK K +R GR+Q PLRLLE R G+ GGG S G G G GI ++ G G VVPRDAIGQLLKCCWALVP G+ P + A G I+ + K+AEAE +AR +LG G S + G R G+P+ VG + T EGEAL+AVVEFL GG MET+R++ PS + + D DV E A P CHPG+V PL L +VVT+AEA+ DCLL + AS VSRV GD + + PL++ WA AD FTLLAAA RV +G+ GG+ KQ + R EGLS +I+SL +T GLS + XXXXXXXXXXXX + L S SA VFV+EFL W A +E+ ++ + EGWDGG+GVWLGL HSV+TL++ L++ N S+ A GG + V G AT+ P E+ ALA+F+LR VVG+PSAA V SA + + +PS T G+ + D S RPPPG M+TGFL +MS RWK L WGLP + PP R S G G + G++ EA DLF+ L+ ELLR+ERL LS+LL G +++ + W +RAALA++ R + + R T + + KC DR P A R E PE+GSGPAR A + NG + + R+S GG + SD GG L A GG + G++ +EG E + GLG LCR AA E+REGLE GLSVKL+ AYLDL+EL G+AALEH +R+ + P T A + +A + G D N + +DAG VL S++TCH V+Q LF RLVRGAV+ +G+G+ + RR ER +RLLVHCVRW+R R G ++E DG ES EE V DA A G G K + + DG Y+ PE V A+ REC+AA+ L E E +SL S GG G GGG S G + +VLA VA LR+FF +T + +L LM++LERV+L G+ A L KP TA T V A P KRRR ++ KPGDQA G P + K S S +A+ +S +G + P V G+ G S A AH + +E G + PE A +L V PA ASG CL LM AAR WAEA R ++RR GDDPCRK+AST+LFKI+RCELE+ AA RQ+L++F D +++ KA RSG ++G + DK G GD ++ + GG T + E LE ALR L+AGA+T+AA RR+SAA +R T KR + R G+G + + R+ R +G G+RR RVRSRN VIDGWLEE E N DAFVDLEDFI
Sbjct: 7 MDATMLKVDRLVDGMHGEDPGGARLYMSQIRESETLSMLECFEDMLSGKLPVAPPSSSRC--------PTPLNIASGGSMAYRVPPSEFLKVLVEGNTTRVGALHAVMQAIGRGDLQGRAASLCISEVRMCLSACANMTGVANGDRGSTNPVHRRMPLAQ--LRELAGVCLSFSMDIHSATASGRPAPGVYAGGRRGAEDANNRRVLMLQAFPAVLGACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKMRKGKGKSVGTNEDERRRSSVGDHVGDGLSTGVRGRSR---SGKVISNGRGASGGGWSEGGLPQRGEAILWDVTDALLDRPWPLRLALPLLVMFEEIFGLVELLERRGCEARHQAQESG-------------GGAVPGKES---VWTRVRSRLMELVWMGGLDGADFTGVIRQVCVLCDTDDRRNYEHDTRHSSPPLREEVSGC----DVAPGAATSHEPQERLLPKNGHSERTEMRDGVDGVRKARRGEQTRVSS--RGGGWISCLRQLYAAVPPEWVSTVELVLEQTLHQMPGVAESLLDAIQDTSSSSVNTGEADYGVMTGAGLGSSQAEXXXXXXXXXXXXXXXXXX-------------------------XSTPTSISHDLALLILLLREASPLRACSLPLLPVGVDRGRRAEEGVRSLLLHAARSGFDGR------------------AAVISRSSGNNQMNE-------YRGREGALDSTRALLRAVLCSEPGCKGSGXXXXXXXXXXXXXXXXXXSGGVFRNGGESSGVVSERASQLLELALRWLEEGDGGSGGDGSVAFDTEGVGTELNIQDIASETISAVFDAVVEARPRLLRALLSGIYDQSQGGAACAWNYMRAWEALMAQETGRECRRLVPHSQCVSDALGQLTLLPRGRARRVVESMLPLADVCPTQASAMISLCRKCSVQGESKGRLLTLHAVTCILAWNARRGHTG-RNGGCLDQEGMQEDLVGMFRRAFEGGLQTVARADALHLLATKLATSVAGAITQGTQYNRAQLLSAMPCQ-------MPQQSHARATIHVDPPPAIDRTALNGLRAFLSMRLFRFFAHKDEVLSA------DSNADGGGDNSGGP-APSGGY--------DADSLSRRKGKHK--ARRRRGGRFQLVPLRLLEER-------GASGGGH-SFGGKSSRGKGPGIVRNGRGRG------VVPRDAIGQLLKCCWALVPAGGPT---GTDVPDDGAH-----GTIMPVPE----KRAEAEAIARMLLGAG-SRRRSEGGGRERGGRPS---VGRVSVDTREGEALVAVVEFLQGGGTMETLRMVTPSNQQTPDQQEADDDVIEPP-----APAPPACHPGVVSPLTTLGVVVTLAEALADCLLTGISCPRAIHFSRKASRCEVSRVEPADGHHVGDGGDGGPTSGKPEAPLVL-WAIADVFTLLAAATRVADGIAAPLGGLSKQPQTRAPEGLSEIISSLPAETLGLSRGSELNATVVGVEEGDDSDSGGAMGERGXXXXXXXXXXXXXXASGQSSLLSATSALVFVREFLGW-AEKEKGKSPAALVAEGWDGGIGVWLGLVHSVQTLSRALKTTRGNCSRDGA-------GG------VSVGGAATQNSDPCAEAIALAVFQLRTVVGTPSAAVSVVDPSAEASKTTVSSDERSAGAASPSVGHG--TARGTHETDSPIMHQTSRRPPPGKMITGFLTKMSMRWKTALPWGLPSVAPPRRTSXXXXXXXXXXXXXXX----GCGGHA---VAGGVKAEAEDLFFALQAELLRSERLVLSILLVGPNASLAQRGWTMRAALASACPRQLAENVEE-----WRSPPPGTSAASSAATKCAPDR-----PRAFS--------RREEPPESGSGPARGAASSNGRV--VRATLRKSATLAGGRNGSDAAATEQEFGGKLGRASNMGVGGRRGLVGAKGVREGGEGGDKWNGLGGLCRLAAAEMREGLETGLSVKLSHAYLDLIELLGSAALEHRSCARRTPKPNAAAGPAETSAADRSSEQGSAGACWGQADDAMN---------TGDGNKEDAGGVLLSIVTCHTVSQSKLFNRLVRGAVRLDGIGISHHPQPPRRTAAASLAELRARDREISCVANHPDGGQGGGGAGCNGANRVEGLRAVAVSPPSLERSTRLLVHCVRWIRARHGNKRGRTAI-LLSEEDGSESSEEEGVXXXXXXXXXXLPDAEHASGKG--------KGLSDLRARDGRQS----RYSLCPEKVKFASSRECFAAMRTALVECE----TSLSSVGGVDVG--------GGGGASSTG---NLADVLATVAFCLREFFTPGST------------------------------------------------------------------------------STRLLLMRVLERVFLVGKGALASASATLAKPSSTATA--------TVVAVRAAPXXXXXXXXXXXXXXX-----------------KRRRQQHAATVENGKPGDQAGGA--PCRTPA---KCGGTNSTERSGGSRAAKDGDSGSGRRPPQSRSVSSSSGRQGKGAXXXXXRAGSDAAAAAHSELSRLGQESGMTKAPEGALDAVLAPVLPAVALASGDCLRLMLAARTWAEALRLKSRRGGDDPCRKRASTMLFKIERCELEIGTAAHKTRQFLEHFQDG----EKNSAVKAETRSGGVRGATRKRARGGCDKDGGGGDPAKAKKLEPGGSTTISCD----ENLESALRLLLAGADTVAAWRRDSAAKEKSRAARPTHGGKRGQARRERQQGLGPGAEHEEGDEEEAGGRSNSVRHRFTGASGKRRRSRRARVRSRNVVIDGWLEEGGEEGGNRDDAFVDLEDFI 2595 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig526.12635.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig526.12635.1 >prot_H-paniculata_contig526.12635.1 ID=prot_H-paniculata_contig526.12635.1|Name=mRNA_H-paniculata_contig526.12635.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=2778bp MEAIMLTVDRLVDALNGEDPGGARMYMAQLRDKEAQTLLQSFQEVLVGNLback to top mRNA from alignment at H-paniculata_contig526:9405..26006+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig526.12635.1 ID=mRNA_H-paniculata_contig526.12635.1|Name=mRNA_H-paniculata_contig526.12635.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=16602bp|location=Sequence derived from alignment at H-paniculata_contig526:9405..26006+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig526:9405..26006+ >mRNA_H-paniculata_contig526.12635.1 ID=mRNA_H-paniculata_contig526.12635.1|Name=mRNA_H-paniculata_contig526.12635.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=16668bp|location=Sequence derived from alignment at H-paniculata_contig526:9405..26006+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |