prot_H-paniculata_contig5251.12626.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig5251.12626.1
Unique Nameprot_H-paniculata_contig5251.12626.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length407
Homology
BLAST of mRNA_H-paniculata_contig5251.12626.1 vs. uniprot
Match: A0A6H5KEE9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KEE9_9PHAE)

HSP 1 Score: 324 bits (830), Expect = 6.800e-105
Identity = 199/414 (48.07%), Postives = 255/414 (61.59%), Query Frame = 0
Query:    5 VELKECAKTHLKDLASEITTLIGHARPAGKG--LPMNCWSTNSEDINVALTVLQAAGSSINDAITRFNIVFKANPGDAASESMAKELAGFCQQMVSSLMLLPSVGASDSMVAFFATSSRAVLHSLKDVVDALLDTSKHAQINGLTGVVWRACKELQQAPKTNKLACRQGLVFWSVAIKDTIDEFQEAAKNKKSTEETADSTPLATATGDSSTSTKTSSELEKM------MGDLSMNDPGLQ----DNDFXXXXXXXXXXMNYSPSELRCVDAALDVLRASRRCLKAANESLNKLDSAKPSGSGEATGISSDEEKRLSRSLAWAQALQGCLSKANDGAAELGVSLYPPLNGGDLSARAEDLERALGEFCDVFDEQKGVESGSSAGSGSVADRKRPQLREIVEETADALRVELAKL 406
            +EL    K HL+ L  EI  LIGH+   GKG      CWS NSED++VAL V+ AA  SI+D +TR N+V+KANP + ASESM++E+ GFCQQMV+SL LL SVGAS SMV +F+   RAVLHS+KD++ ALLD S+HA++NGLTG VW+ CKELQQAPKTNKLACR+ ++ WSVA+KDTIDEF EAAK              A A    S S      L++       +G     + G +    D DF           NY  +EL CV+A++DVLR  RRCLKAAN+SLN LDS +P     AT   + E   L   L WA+++Q  L  AN+ A E+GV LYPPL+GG+L  RA DLE++L  F +VF         S+ G G+ ++ + P LR+ V E    LR  L KL
Sbjct:    1 MELNGAVKGHLEGLGKEIDALIGHSM-YGKGGTYSPTCWSKNSEDVDVALRVIGAASQSIHDGVTRLNLVYKANPSEVASESMSREMGGFCQQMVASLTLLSSVGASKSMVTYFSAGVRAVLHSVKDLIGALLDPSRHARLNGLTGTVWQTCKELQQAPKTNKLACRRQMMQWSVAVKDTIDEFVEAAKT------------AAMANAGKSESAGDKGGLDEQFAAKVTVGGAGEGEVGAEGTFDDFDFDGMDE------NYGAAELSCVEASVDVLRVFRRCLKAANDSLNSLDSPEPQEESGATAGPAGEGW-LQGKLEWAKSVQTHLDDANECAGEVGVLLYPPLDGGELLGRANDLEKSLAAFFEVF---------SAGGEGTNSEMESP-LRKAVVEKLGVLRAALEKL 384          
BLAST of mRNA_H-paniculata_contig5251.12626.1 vs. uniprot
Match: A0A836CN71_9STRA (Grap2 and cyclin-D-interacting-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CN71_9STRA)

HSP 1 Score: 122 bits (305), Expect = 2.640e-27
Identity = 99/339 (29.20%), Postives = 156/339 (46.02%), Query Frame = 0
Query:   41 WSTNSEDINVALTVLQAAGSSINDAITRFNIVFKANPGDAASESMAKELAGFCQQMVSSLM--LLPSVGASDSMVAFFATSSRAVLHSLKDVVDALL-DTSKHAQINGLTGVVWRACKELQQAPKTNKLACRQGLVFWSVAIKDTIDEFQEAAKNKKSTEETADSTPLATATGDSSTSTKTSSELEKMMGDLSMNDPG-LQDNDFXXXXXXXXXXMNY-----------SPSELRCVDAALDVLRASRRCLKAANESLNKLDSAKPSGSGEATGISSDEEKRLSRSLAWAQALQGCLSKANDGAAELGVSLYPPLNGGDLSARAEDLERALGEFCDVFD 364
            W+T S+ + VAL+V+  A +SI+ + TRF ++FK  P    +  M  E+      + SSL   L P  G S S+      + RAV  +L ++V ++    S   + N LTG +W ACK + + P TNKLA R  L+  S++IKDTIDEF+ A +              A    D   S + S+       D   ++PG   D+            ++Y           SP+E     A +++LR SR C+K AN+++     A  +GSG A G+           +AWA  L   +    +   ++G++LYPP+ G  + A A+     +    D  D
Sbjct:   43 WATPSDSLKVALSVMLTAANSISGSSTRFTLLFKTAPPPEITAGMVNEMGSLSDHLASSLAVALAPEQGVSPSLAVAIIGAVRAVQVALLELVKSVAAGPSTEPEWNHLTGALWEACKGVAEVPTTNKLAVRMQLMCVSMSIKDTIDEFKAALE--------------AAEAADGGLSGEVSALSISGSADNQSHEPGKTADSARDEAVDSFDDLVDYMDGEGADEDAMSPAEAEAAAAVVELLRTSRACIKTANDAM-----AAATGSGAARGV-----------MAWAGPLCEEVQSLAEQVGDVGMALYPPMEGAAVVAAADGFGARVTACLDKVD 351          
BLAST of mRNA_H-paniculata_contig5251.12626.1 vs. uniprot
Match: A0A7S3H5N5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H5N5_9STRA)

HSP 1 Score: 62.4 bits (150), Expect = 5.470e-7
Identity = 72/299 (24.08%), Postives = 139/299 (46.49%), Query Frame = 0
Query:   46 EDINVALTVLQAAGSSINDAITRFNIVFKANPGDAASESMAKELAGFCQQMVSSLMLLPSVGASDSMVAFFATSSRAVLHSLKDVVDALLDTSKHAQINGLTGVVWRACKELQQAPKTNKLACRQGLVFWSVAIKDTIDEFQ---EAAKNKKSTEETADSTPLATATGDSSTSTKTSSEL--EKMMGDLSMNDPGLQDNDFXXXXXXXXXXMNYSPSELRCVDAALDVLRASRRCLKAANESLNKLDSAKPSGSGEATGISSDEEKRLSRSLAWAQALQGCLSKANDGAAELGVSLYPP 339
            E +  ++T+L+     +++   +  ++ KA P + A  S+  EL+   + + +          +D +      + R +L  ++D + AL   S  + +N + G+V +    +++ P +NK A R   +   + +K+T+ EF+   + A+ K++ +  A+  P +  TG ++ +      +  E + GD        Q    XXXXXXXXX ++Y+P E+R V+A++ +L  +  C+K        +  A  + +  +T   + EE     S  W   L       N  A +LG  LYPP
Sbjct:   52 ESLRNSITILKDIAKVLSNGCIKLILLMKAKPSNDALASLLSELSNHAKLLTAHYFKFLENSVADCLFDSVTRAVRTLLSHIQDFLRALQSGSTDS-LNYMVGMVTKIVDAMEKIPLSNKQAYRTLFMQNCILVKETLQEFKAYLDEAREKRARQ--AEELPESVLTGVANIALSAQGPVVAEDVDGDSE------QXXXXXXXXXXXXXELDYTPEEVRVVEASVVLLGKTVSCIKHTLFIATTVCDAIIAPTNASTATDATEEGAEKHSQQWVAQLAHLTQLLNKDALDLGAELYPP 341          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5251.12626.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5KEE9_9PHAE6.800e-10548.07Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CN71_9STRA2.640e-2729.20Grap2 and cyclin-D-interacting-domain-containing p... [more]
A0A7S3H5N5_9STRA5.470e-724.08Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 179..199
NoneNo IPR availablePFAMPF13324GCIPcoord: 55..357
e-value: 2.0E-25
score: 89.9
NoneNo IPR availablePANTHERPTHR15492:SF1CYCLIN-D1-BINDING PROTEIN 1coord: 24..366
IPR026907Cyclin-D1-binding protein 1PANTHERPTHR15492CYCLIN D1-BINDING PROTEIN 1coord: 24..366

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5251contigH-paniculata_contig5251:7315..13331 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5251.12626.1mRNA_H-paniculata_contig5251.12626.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig5251 7189..13675 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig5251.12626.1 ID=prot_H-paniculata_contig5251.12626.1|Name=mRNA_H-paniculata_contig5251.12626.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=407bp
MAKVVELKECAKTHLKDLASEITTLIGHARPAGKGLPMNCWSTNSEDINV
ALTVLQAAGSSINDAITRFNIVFKANPGDAASESMAKELAGFCQQMVSSL
MLLPSVGASDSMVAFFATSSRAVLHSLKDVVDALLDTSKHAQINGLTGVV
WRACKELQQAPKTNKLACRQGLVFWSVAIKDTIDEFQEAAKNKKSTEETA
DSTPLATATGDSSTSTKTSSELEKMMGDLSMNDPGLQDNDFDFNDDDDDD
DMNYSPSELRCVDAALDVLRASRRCLKAANESLNKLDSAKPSGSGEATGI
SSDEEKRLSRSLAWAQALQGCLSKANDGAAELGVSLYPPLNGGDLSARAE
DLERALGEFCDVFDEQKGVESGSSAGSGSVADRKRPQLREIVEETADALR
VELAKL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR026907CCNDBP1