prot_H-paniculata_contig52508.12624.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig52508.12624.1
Unique Nameprot_H-paniculata_contig52508.12624.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length67
Homology
BLAST of mRNA_H-paniculata_contig52508.12624.1 vs. uniprot
Match: A0A811RG30_9POAL (Hypothetical protein n=1 Tax=Miscanthus lutarioriparius TaxID=422564 RepID=A0A811RG30_9POAL)

HSP 1 Score: 67.8 bits (164), Expect = 1.190e-11
Identity = 31/66 (46.97%), Postives = 42/66 (63.64%), Query Frame = 0
Query:    2 GPITPEALGGFKYVGKTSDEHTKWTETYLLKSKGDTLSAFQSFVQSVVIPSGSRIERLRADKGGEY 67
            GPITPE  GG KY     D+H++W E ++LKSK   L AF  +   V   SG +I+ LR+D+GGE+
Sbjct:  394 GPITPETAGGNKYFILLVDDHSRWMEVHMLKSKDQALIAFVKYKAQVENESGCKIKTLRSDRGGEF 459          
BLAST of mRNA_H-paniculata_contig52508.12624.1 vs. uniprot
Match: A0A4S4K8M5_9APHY (Uncharacterized protein (Fragment) n=1 Tax=Hermanssonia centrifuga TaxID=98765 RepID=A0A4S4K8M5_9APHY)

HSP 1 Score: 62.8 bits (151), Expect = 6.920e-10
Identity = 27/66 (40.91%), Postives = 41/66 (62.12%), Query Frame = 0
Query:    2 GPITPEALGGFKYVGKTSDEHTKWTETYLLKSKGDTLSAFQSFVQSVVIPSGSRIERLRADKGGEY 67
            GP   E LGG KY    +D+H++WT TYL+++K +    +QSFV  +    G  ++ L +D+GGEY
Sbjct:  601 GPAPVETLGGRKYYVSFTDDHSRWTVTYLMRTKDEVFRHYQSFVALMKAHHGVAVKLLHSDRGGEY 666          
BLAST of mRNA_H-paniculata_contig52508.12624.1 vs. uniprot
Match: A0A2R6PCF8_9APHY (Uncharacterized protein n=1 Tax=Hermanssonia centrifuga TaxID=98765 RepID=A0A2R6PCF8_9APHY)

HSP 1 Score: 60.5 bits (145), Expect = 4.580e-9
Identity = 26/66 (39.39%), Postives = 40/66 (60.61%), Query Frame = 0
Query:    2 GPITPEALGGFKYVGKTSDEHTKWTETYLLKSKGDTLSAFQSFVQSVVIPSGSRIERLRADKGGEY 67
            GP   E LGG KY    +D+H++WT TYL+++K +    +QSFV  +       ++ L +D+GGEY
Sbjct:  601 GPAPVETLGGRKYYVSFTDDHSRWTVTYLMRTKDEVFRHYQSFVALMKAHHSVAVKLLHSDRGGEY 666          
BLAST of mRNA_H-paniculata_contig52508.12624.1 vs. uniprot
Match: A0A6H5JK46_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK46_9PHAE)

HSP 1 Score: 60.1 bits (144), Expect = 6.120e-9
Identity = 29/63 (46.03%), Postives = 36/63 (57.14%), Query Frame = 0
Query:    4 ITPEALGGFKYVGKTSDEHTKWTETYLLKSKGDTLSAFQSFVQSVVIPSGSRIERLRADKGGE 66
            I  +  G F Y  KT+D+HTK  E YLL+ K DT  A  ++   V    G RIE +R DKGGE
Sbjct:  129 ILRKDTGCFPYACKTTDDHTKMKEVYLLRKKSDTTEAVHTYNMCVAAAGGYRIETIRCDKGGE 191          
BLAST of mRNA_H-paniculata_contig52508.12624.1 vs. uniprot
Match: A0A438E9S1_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438E9S1_VITVI)

HSP 1 Score: 58.2 bits (139), Expect = 2.920e-8
Identity = 25/66 (37.88%), Postives = 42/66 (63.64%), Query Frame = 0
Query:    2 GPITPEALGGFKYVGKTSDEHTKWTETYLLKSKGDTLSAFQSFVQSVVIPSGSRIERLRADKGGEY 67
            GP+TP ALGG+KY     D+ +++    L+  K D+L+ F++F   V +  G  I+ +++D+GGEY
Sbjct:  272 GPLTPTALGGYKYFITFIDDFSRYGYAELIHEKSDSLNVFKAFKAKVELQLGKPIKAVKSDRGGEY 337          
BLAST of mRNA_H-paniculata_contig52508.12624.1 vs. uniprot
Match: A0A438BT79_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438BT79_VITVI)

HSP 1 Score: 57.8 bits (138), Expect = 3.980e-8
Identity = 25/66 (37.88%), Postives = 42/66 (63.64%), Query Frame = 0
Query:    2 GPITPEALGGFKYVGKTSDEHTKWTETYLLKSKGDTLSAFQSFVQSVVIPSGSRIERLRADKGGEY 67
            GP+TP ALGG+KY     D+ +++    L+  K D+L+ F++F   V +  G  I+ +++D+GGEY
Sbjct:  158 GPLTPTALGGYKYFITFIDDFSRFGYVELIHEKSDSLNVFKAFKAKVELQLGKPIKAVKSDRGGEY 223          
BLAST of mRNA_H-paniculata_contig52508.12624.1 vs. uniprot
Match: A5BH00_VITVI (Integrase catalytic domain-containing protein n=1 Tax=Vitis vinifera TaxID=29760 RepID=A5BH00_VITVI)

HSP 1 Score: 57.8 bits (138), Expect = 4.070e-8
Identity = 25/66 (37.88%), Postives = 42/66 (63.64%), Query Frame = 0
Query:    2 GPITPEALGGFKYVGKTSDEHTKWTETYLLKSKGDTLSAFQSFVQSVVIPSGSRIERLRADKGGEY 67
            GP+TP ALGG+KY     D+ +++    L+  K D+L+ F++F   V +  G  I+ +++D+GGEY
Sbjct:  355 GPLTPTALGGYKYSITFIDDFSRYGYVELIHEKSDSLNVFKAFKAKVELQLGKPIKAVKSDRGGEY 420          
BLAST of mRNA_H-paniculata_contig52508.12624.1 vs. uniprot
Match: A0A438DQE9_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438DQE9_VITVI)

HSP 1 Score: 57.4 bits (137), Expect = 5.300e-8
Identity = 25/66 (37.88%), Postives = 42/66 (63.64%), Query Frame = 0
Query:    2 GPITPEALGGFKYVGKTSDEHTKWTETYLLKSKGDTLSAFQSFVQSVVIPSGSRIERLRADKGGEY 67
            GP+TP ALGG+KY     D+ +++    L+  K D+L+ F++F   V +  G  I+ +++D+GGEY
Sbjct:   74 GPLTPTALGGYKYFITFIDDFSRFGYVELIHEKSDSLNMFKAFKAKVELQLGKPIKAVKSDRGGEY 139          
BLAST of mRNA_H-paniculata_contig52508.12624.1 vs. uniprot
Match: A0A438C3G6_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438C3G6_VITVI)

HSP 1 Score: 57.4 bits (137), Expect = 5.460e-8
Identity = 25/66 (37.88%), Postives = 43/66 (65.15%), Query Frame = 0
Query:    2 GPITPEALGGFKYVGKTSDEHTKWTETYLLKSKGDTLSAFQSFVQSVVIPSGSRIERLRADKGGEY 67
            GP+TP ALGG+KY     D+ +++    L+  K D+L+ F++F  +V +  G  I+ +++D+GGEY
Sbjct:  419 GPLTPTALGGYKYFITFIDDFSRFGYVELIHEKSDSLNVFKAFKANVELQLGKPIKVVKSDRGGEY 484          
BLAST of mRNA_H-paniculata_contig52508.12624.1 vs. uniprot
Match: A0A438JQV8_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438JQV8_VITVI)

HSP 1 Score: 57.0 bits (136), Expect = 7.470e-8
Identity = 25/66 (37.88%), Postives = 43/66 (65.15%), Query Frame = 0
Query:    2 GPITPEALGGFKYVGKTSDEHTKWTETYLLKSKGDTLSAFQSFVQSVVIPSGSRIERLRADKGGEY 67
            GP+TP ALGG+KY     D+ +++    L+  K D+L+ F++F  +V +  G  I+ +++D+GGEY
Sbjct:  139 GPLTPTALGGYKYFITFIDDFSRFGYVELIHEKFDSLNVFKAFKANVELQLGKPIKAVKSDRGGEY 204          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig52508.12624.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A811RG30_9POAL1.190e-1146.97Hypothetical protein n=1 Tax=Miscanthus lutariorip... [more]
A0A4S4K8M5_9APHY6.920e-1040.91Uncharacterized protein (Fragment) n=1 Tax=Hermans... [more]
A0A2R6PCF8_9APHY4.580e-939.39Uncharacterized protein n=1 Tax=Hermanssonia centr... [more]
A0A6H5JK46_9PHAE6.120e-946.03Integrase catalytic domain-containing protein n=1 ... [more]
A0A438E9S1_VITVI2.920e-837.88Retrovirus-related Pol polyprotein from transposon... [more]
A0A438BT79_VITVI3.980e-837.88Retrovirus-related Pol polyprotein from transposon... [more]
A5BH00_VITVI4.070e-837.88Integrase catalytic domain-containing protein n=1 ... [more]
A0A438DQE9_VITVI5.300e-837.88Retrovirus-related Pol polyprotein from transposon... [more]
A0A438C3G6_VITVI5.460e-837.88Retrovirus-related Pol polyprotein from transposon... [more]
A0A438JQV8_VITVI7.470e-837.88Retrovirus-related Pol polyprotein from transposon... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 7..67

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig52508contigH-paniculata_contig52508:173..373 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig52508.12624.1mRNA_H-paniculata_contig52508.12624.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig52508 155..373 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig52508.12624.1 ID=prot_H-paniculata_contig52508.12624.1|Name=mRNA_H-paniculata_contig52508.12624.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=67bp
MGPITPEALGGFKYVGKTSDEHTKWTETYLLKSKGDTLSAFQSFVQSVVI
PSGSRIERLRADKGGEY
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012337RNaseH-like_sf