prot_H-paniculata_contig5247.12616.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-paniculata_contig5247.12616.1
Unique Name	prot_H-paniculata_contig5247.12616.1
Type	polypeptide
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length	120

Homology

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BLAST of mRNA_H-paniculata_contig5247.12616.1 vs. uniprot
Match: A0A6H5L5M1_9PHAE (AMP-binding domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5M1_9PHAE)

HSP 1 Score: 182 bits (463), Expect = 6.630e-55
Identity = 85/115 (73.91%), Postives = 98/115 (85.22%), Query Frame = 0

Query:    8 AVELLRWVATTVRDKRAGD---VFARWYDAQGQVSATYTFEGLWTEAGRIAHQLRVAWGLSKGDRVVLCFGFGLDFFAAFLGCLRAGVLAVPVYPPSPLTMSKSLQKLQGIVDAC 119
            +VELLRW   TVR +  G+   VFARW+DAQG+VS T+TF  +W EAGRIAH+LRV+WGL KGDR +LC+GFGLDFFAAFLGCLRAGVLAVPVYPPSPLT+SKSL KLQ IV+AC
Sbjct:   12 SVELLRWAEATVRGRSGGENEVVFARWFDAQGEVSQTHTFASVWAEAGRIAHELRVSWGLGKGDRAILCYGFGLDFFAAFLGCLRAGVLAVPVYPPSPLTLSKSLTKLQSIVEAC 126

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BLAST of mRNA_H-paniculata_contig5247.12616.1 vs. uniprot
Match: D7G7J4_ECTSI (Carrier domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7J4_ECTSI)

HSP 1 Score: 185 bits (469), Expect = 3.130e-53
Identity = 86/115 (74.78%), Postives = 99/115 (86.09%), Query Frame = 0

Query:    8 AVELLRWVATTVRDKRAGD---VFARWYDAQGQVSATYTFEGLWTEAGRIAHQLRVAWGLSKGDRVVLCFGFGLDFFAAFLGCLRAGVLAVPVYPPSPLTMSKSLQKLQGIVDAC 119
            +VELLRW   TVR +  G+   VFARW+DAQG+VS T+TF  +W EAGRIAH+LRV+WGL KGDR +LC+GFGLDFFAAFLGCLRAGVLAVPVYPPSPLT+SKSL KLQGIV+AC
Sbjct:    3 SVELLRWAEATVRGRSGGENDAVFARWFDAQGEVSETHTFASVWAEAGRIAHELRVSWGLGKGDRAILCYGFGLDFFAAFLGCLRAGVLAVPVYPPSPLTLSKSLTKLQGIVEAC 117

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BLAST of mRNA_H-paniculata_contig5247.12616.1 vs. uniprot
Match: D7FH91_ECTSI (AMP-binding domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH91_ECTSI)

HSP 1 Score: 143 bits (360), Expect = 1.070e-37
Identity = 68/118 (57.63%), Postives = 86/118 (72.88%), Query Frame = 0

Query:    2 ANSQTCAVELLRWVATTVRDKRAGDVFARWYDAQGQVSATYTFEGLWTEAGRIAHQLRVAWGLSKGDRVVLCFGFGLDFFAAFLGCLRAGVLAVPVYPPSPLTMSKSLQKLQGIVDAC 119
            A++++     L+ +A +V       VFARWY+ +GQV +T TF G+W  +G IAH LRV WGL+KGDRVVL F FGL FFA FLGCLRAG++AVPVYPP+P T+ KSLQ LQ IV+ C
Sbjct:   18 ASARSSQDTFLQAIAQSVAKTPEDRVFARWYNRKGQVESTRTFHGVWGASGEIAHLLRVEWGLTKGDRVVLAFNFGLRFFAVFLGCLRAGIIAVPVYPPNPATLKKSLQNLQLIVEGC 135

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BLAST of mRNA_H-paniculata_contig5247.12616.1 vs. uniprot
Match: D7FRT1_ECTSI (Long-chain acyl-CoA synthetase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRT1_ECTSI)

HSP 1 Score: 144 bits (363), Expect = 1.380e-37
Identity = 66/108 (61.11%), Postives = 83/108 (76.85%), Query Frame = 0

Query:   12 LRWVATTVRDKRAGDVFARWYDAQGQVSATYTFEGLWTEAGRIAHQLRVAWGLSKGDRVVLCFGFGLDFFAAFLGCLRAGVLAVPVYPPSPLTMSKSLQKLQGIVDAC 119
            L+ +A ++       VF RWY+++GQV +T TF G+W  +G IAH LRV WGLSKGDRVVL F FGL FFA FLGCLRAG++AVPVYPP+P T+ +SL+KLQ IVD+C
Sbjct:  452 LQAIARSINKIPEDQVFGRWYNSKGQVESTRTFHGVWVASGEIAHLLRVEWGLSKGDRVVLAFDFGLRFFAVFLGCLRAGIIAVPVYPPNPATLKRSLKKLQLIVDSC 559

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BLAST of mRNA_H-paniculata_contig5247.12616.1 vs. uniprot
Match: A0A6H5JSY1_9PHAE (Carrier domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSY1_9PHAE)

HSP 1 Score: 144 bits (362), Expect = 1.860e-37
Identity = 69/118 (58.47%), Postives = 86/118 (72.88%), Query Frame = 0

Query:    2 ANSQTCAVELLRWVATTVRDKRAGDVFARWYDAQGQVSATYTFEGLWTEAGRIAHQLRVAWGLSKGDRVVLCFGFGLDFFAAFLGCLRAGVLAVPVYPPSPLTMSKSLQKLQGIVDAC 119
            A++++     L+ +A +V       VFARWY+  GQV +T TF G+W  +G IAH LRV WGL+KGDRVVL F FGL FFA FLGCLRAG++AVPVYPP+P T+ KSLQKLQ IV+ C
Sbjct:   16 ASARSSQDTFLQAIALSVAKTPEDRVFARWYNRVGQVESTRTFHGVWGASGEIAHLLRVEWGLTKGDRVVLAFNFGLRFFAVFLGCLRAGIIAVPVYPPNPATLKKSLQKLQLIVEGC 133

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BLAST of mRNA_H-paniculata_contig5247.12616.1 vs. uniprot
Match: D7G4W3_ECTSI (Acyl CoA Synthase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4W3_ECTSI)

HSP 1 Score: 134 bits (336), Expect = 5.950e-34
Identity = 62/85 (72.94%), Postives = 70/85 (82.35%), Query Frame = 0

Query:   35 QGQVSATYTFEGLWTEAGRIAHQLRVAWGLSKGDRVVLCFGFGLDFFAAFLGCLRAGVLAVPVYPPSPLTMSKSLQKLQGIVDAC 119
            +GQV +T TF G+W  +G IAH LRV WGLSKGDRVVL F FGL FFA FLGCLRAG+LAVPVYPP+P T+ KSLQKLQ IVD+C
Sbjct:   13 KGQVESTRTFHGVWAASGEIAHLLRVEWGLSKGDRVVLAFNFGLGFFAVFLGCLRAGILAVPVYPPNPATLKKSLQKLQLIVDSC 97

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BLAST of mRNA_H-paniculata_contig5247.12616.1 vs. uniprot
Match: A0A6H5KNL6_9PHAE (AMP-binding domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNL6_9PHAE)

HSP 1 Score: 127 bits (320), Expect = 1.700e-33
Identity = 61/109 (55.96%), Postives = 76/109 (69.72%), Query Frame = 0

Query:   11 LLRWVATTVRDKRAGDVFARWYDAQGQVSATYTFEGLWTEAGRIAHQLRVAWGLSKGDRVVLCFGFGLDFFAAFLGCLRAGVLAVPVYPPSPLTMSKSLQKLQGIVDAC 119
            L+R +   + +     VFARWY  +G V +T TF G+W  +G IA+ LR   GL+KGDRVVL F FGL FF  FLGCLRAGV+AVPVYPP+P T+ KSL KL  IV++C
Sbjct:   11 LIRKIHGVIAEMPRDKVFARWYGDKGHVESTRTFHGIWAASGEIAYLLRSTLGLNKGDRVVLAFNFGLRFFVVFLGCLRAGVVAVPVYPPNPATLQKSLGKLSLIVESC 119

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BLAST of mRNA_H-paniculata_contig5247.12616.1 vs. uniprot
Match: A0A7S2E6E5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2E6E5_9STRA)

HSP 1 Score: 114 bits (286), Expect = 1.170e-27
Identity = 55/112 (49.11%), Postives = 71/112 (63.39%), Query Frame = 0

Query:    8 AVELLRWVATTVRDKRAGDVFARWYDAQGQVSATYTFEGLWTEAGRIAHQLRVAWGLSKGDRVVLCFGFGLDFFAAFLGCLRAGVLAVPVYPPSPLTMSKSLQKLQGIVDAC 119
            +V  L  +  TV  ++ GD FA WYD+ G     YTF+ +W EAG ++H LR    L KGD V+LC+ FGLDFF AFL CLR+ ++A+PVYPP   T  K L KL+ I D C
Sbjct:  319 SVPFLNLLQNTV-SRKGGDTFATWYDSNGTAEKDYTFQHIWEEAGFMSHYLRCEKKLKKGDHVILCYNFGLDFFIAFLACLRSALVAIPVYPP---TQKKGLVKLKAITDDC 426

[Close]

BLAST of mRNA_H-paniculata_contig5247.12616.1 vs. uniprot
Match: A0A6H5J7K1_9PHAE (AMP-binding domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7K1_9PHAE)

HSP 1 Score: 110 bits (276), Expect = 6.630e-26
Identity = 52/71 (73.24%), Postives = 57/71 (80.28%), Query Frame = 0

Query:   49 TEAGRIAHQLRVAWGLSKGDRVVLCFGFGLDFFAAFLGCLRAGVLAVPVYPPSPLTMSKSLQKLQGIVDAC 119
            T    IAH LRV WGLSKGDRVVL F FGL FFA FLGCLRAG++AVPVYPP+P T+ KSL+KLQ IVD C
Sbjct:   21 TSVSEIAHLLRVEWGLSKGDRVVLAFDFGLRFFAVFLGCLRAGIIAVPVYPPNPATLKKSLKKLQLIVDDC 91

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BLAST of mRNA_H-paniculata_contig5247.12616.1 vs. uniprot
Match: A0A4D9CX67_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CX67_9STRA)

HSP 1 Score: 108 bits (269), Expect = 6.650e-25
Identity = 46/105 (43.81%), Postives = 74/105 (70.48%), Query Frame = 0

Query:   16 ATTVRDKRAGDVFARWYDAQGQVSATYTFEGLWTEAGRIAHQLRVAWGLSKGDRVVLCFGFGLDFFAAFLGCLRAGVLAVPVYPPSPLTMSKSLQKLQGIVDACG 120
            A ++ +++ G +F+ W   + + +  +++E +W  +G IA+ L   +G+ KG+RV+LC+GFGL+FF AFL CLR GV+AVPVYPP+P  +  SL+KL+ IV + G
Sbjct:   42 AKSMAEEKGGQIFSTWIGDKNE-TIDFSYEYIWDRSGAIAYHLNTKYGIKKGERVILCYGFGLEFFVAFLACLRLGVVAVPVYPPNPTKLKMSLEKLELIVTSAG 145

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig5247.12616.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig5247.12616.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5L5M1_9PHAE	6.630e-55	73.91	AMP-binding domain-containing protein n=1 Tax=Ecto...	[more]
D7G7J4_ECTSI	3.130e-53	74.78	Carrier domain-containing protein n=1 Tax=Ectocarp...	[more]
D7FH91_ECTSI	1.070e-37	57.63	AMP-binding domain-containing protein n=1 Tax=Ecto...	[more]
D7FRT1_ECTSI	1.380e-37	61.11	Long-chain acyl-CoA synthetase n=1 Tax=Ectocarpus ...	[more]
A0A6H5JSY1_9PHAE	1.860e-37	58.47	Carrier domain-containing protein n=1 Tax=Ectocarp...	[more]
D7G4W3_ECTSI	5.950e-34	72.94	Acyl CoA Synthase n=1 Tax=Ectocarpus siliculosus T...	[more]
A0A6H5KNL6_9PHAE	1.700e-33	55.96	AMP-binding domain-containing protein n=1 Tax=Ecto...	[more]
A0A7S2E6E5_9STRA	1.170e-27	49.11	Hypothetical protein (Fragment) n=1 Tax=Ditylum br...	[more]
A0A6H5J7K1_9PHAE	6.630e-26	73.24	AMP-binding domain-containing protein n=1 Tax=Ecto...	[more]
A0A4D9CX67_9STRA	6.650e-25	43.81	Uncharacterized protein n=1 Tax=Nannochloropsis sa...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR042099	AMP-dependent synthetase-like superfamily	GENE3D	3.40.50.12780		coord: 2..120 e-value: 2.9E-20 score: 74.3
IPR000873	AMP-dependent synthetase/ligase	PFAM	PF00501	AMP-binding	coord: 31..102 e-value: 2.0E-13 score: 49.8
None	No IPR available	PANTHER	PTHR22754	DISCO-INTERACTING PROTEIN 2 DIP2 -RELATED	coord: 19..120
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 99..120
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 70..98
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..69
None	No IPR available	SUPERFAMILY	56801	Acetyl-CoA synthetase-like	coord: 8..102
None	No IPR available	TMHMM	TMhelix		coord: 70..92

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig5247	contig	H-paniculata_contig5247:1984..5120 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig5247.12616.1	mRNA_H-paniculata_contig5247.12616.1	Halopteris paniculata Hal_grac_a_UBK monoicous	mRNA	H-paniculata_contig5247 1595..5120 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-paniculata_contig5247.12616.1 ID=prot_H-paniculata_contig5247.12616.1|Name=mRNA_H-paniculata_contig5247.12616.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=120bp
MANSQTCAVELLRWVATTVRDKRAGDVFARWYDAQGQVSATYTFEGLWTE
AGRIAHQLRVAWGLSKGDRVVLCFGFGLDFFAAFLGCLRAGVLAVPVYPP
SPLTMSKSLQKLQGIVDACG

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR042099	AMP-dep_Synthh-like_sf
IPR000873	AMP-dep_Synth/Lig