mRNA_H-paniculata_contig5240.12610.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_H-paniculata_contig5240.12610.1
Unique Name	mRNA_H-paniculata_contig5240.12610.1
Type	mRNA
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)

Homology

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BLAST of mRNA_H-paniculata_contig5240.12610.1 vs. uniprot
Match: D7FK88_ECTSI (SANT domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK88_ECTSI)

HSP 1 Score: 218 bits (556), Expect = 3.780e-60
Identity = 100/145 (68.97%), Postives = 117/145 (80.69%), Query Frame = 1

Query:  595 LLLDGTHPRGPSTKAKDTQRWRTHRMVEDFVNTCGRIMYPQVRVGPFGYDPCQGRFPMERPTTLGITRTEVRRPSVIEKWSPYQVACFEGAISIHGKVFHKVAGQVDGKSVPDVIEFYYMWKKTNHYKQWKDMFHKEQAILQGSE 1029
            LL D    +GPS K K+  RWRTHRMVED+ N CG+IMY  VR GPFGY+  +GRFPMERPTTLG+ +  +RRP+VIE+WSPY VA FEGAIS+HGKVFHKVA +++GK+V DV+EFYYMWKKTNHYKQWK MF  EQAILQ  E
Sbjct:  378 LLEDYHASKGPSNKPKE-MRWRTHRMVEDYTNVCGKIMYGHVRTGPFGYNSVEGRFPMERPTTLGMIKAGMRRPTVIERWSPYDVALFEGAISVHGKVFHKVAEEIEGKTVADVVEFYYMWKKTNHYKQWKSMFRAEQAILQAQE 521

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BLAST of mRNA_H-paniculata_contig5240.12610.1 vs. uniprot
Match: A0A6H5KPS5_9PHAE (SANT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPS5_9PHAE)

HSP 1 Score: 220 bits (561), Expect = 6.890e-60
Identity = 102/148 (68.92%), Postives = 119/148 (80.41%), Query Frame = 1

Query:  595 LLLDGTHPRGPSTKAKDTQRWRTHRMVEDFVNTCGRIMYPQVRVGPFGYDPCQGRFPMERPTTLGITRTEVRRPSVIEKWSPYQVACFEGAISIHGKVFHKVAGQVDGKSVPDVIEFYYMWKKTNHYKQWKDMFHKEQAILQGSESDS 1038
            LL D    +GPS K K+  RWRTHRMVED+ N CG+IMY  VR GPFGY+  +GRFPMERPTTLG+ +  +RRP+VIE+WSP+ VA FEGAIS+HGKVFHKVA ++DGK+V DV+EFYYMWKKTNHYKQWK MF  EQAILQ  E DS
Sbjct:  577 LLEDYHASKGPSNKPKE-MRWRTHRMVEDYTNICGKIMYGHVRTGPFGYNSVEGRFPMERPTTLGMIKAGIRRPTVIERWSPHDVALFEGAISVHGKVFHKVAEEIDGKTVADVVEFYYMWKKTNHYKQWKAMFRAEQAILQAQEGDS 723

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BLAST of mRNA_H-paniculata_contig5240.12610.1 vs. uniprot
Match: A0A835Z5U6_9STRA (SANT domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5U6_9STRA)

HSP 1 Score: 161 bits (408), Expect = 7.410e-44
Identity = 71/133 (53.38%), Postives = 93/133 (69.92%), Query Frame = 1

Query:  601 LDGTHPRGPSTKAKDTQRWRTHRMVEDFVNTCGRIMYPQVRVGPFGYDPCQGRFPMERPTTLGITRTEVRRPSVIEKWSPYQVACFEGAISIHGKVFHKVAGQVDGKSVPDVIEFYYMWKKTNHYKQWKDMFH 999
            +DG  PR    + K+ QRWRTHRMV+D VN CG  MYPQV +GP+GY P  G + +ER   L + +  +RRPS +E+WSP +VA FEGA+ I+GK FHK+A +V  K+    IEFYY+WK T HYKQWK +F+
Sbjct:    1 MDGYRPRLSGWRRKEPQRWRTHRMVDDLVNLCGNSMYPQVSMGPYGYRPEAGSYALERAAMLSMIQHPLRRPSAVEQWSPLEVAKFEGAMCIYGKQFHKIAAEVGTKTCQQAIEFYYVWKLTGHYKQWKKVFY 133

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BLAST of mRNA_H-paniculata_contig5240.12610.1 vs. uniprot
Match: A0A6U0ZH30_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A6U0ZH30_9STRA)

HSP 1 Score: 157 bits (397), Expect = 4.810e-41
Identity = 69/139 (49.64%), Postives = 98/139 (70.50%), Query Frame = 1

Query:  631 TKAKDTQRWRTHRMVEDFVNTCGRIMYPQVRVGPFGYDPCQGRFPMERPTTLGITRTEVRRPSVIEKWSPYQVACFEGAISIHGKVFHKVAGQVDGKSVPDVIEFYYMWKKTNHYKQWKDMFHKEQAILQ-GSESDSGD 1044
            T+ +  +RWRT +M ED++    R+MYP +++GPFGYDP +GRFP+ER   LG     +RRPSVIE+WSPY++A FEGAI++ GK FHKV   V+ K+  +V+EFYY+WKKT HY  WK ++  E   ++ G + + GD
Sbjct:   59 TRGRHRKRWRTTQMAEDYMEMVSRLMYPPIQIGPFGYDPLKGRFPVERLHALGYITNPLRRPSVIERWSPYEIAKFEGAIALFGKHFHKVQRAVESKTTKEVVEFYYVWKKTAHYDHWKRIYEPEMIPVEDGDDEEKGD 197

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BLAST of mRNA_H-paniculata_contig5240.12610.1 vs. uniprot
Match: A0A4D9CXF5_9STRA (SANT domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CXF5_9STRA)

HSP 1 Score: 148 bits (373), Expect = 2.660e-38
Identity = 63/121 (52.07%), Postives = 85/121 (70.25%), Query Frame = 1

Query:  634 KAKDTQRWRTHRMVEDFVNTCGRIMYPQVRVGPFGYDPCQGRFPMERPTTLGITRTEVRRPSVIEKWSPYQVACFEGAISIHGKVFHKVAGQVDGKSVPDVIEFYYMWKKTNHYKQWKDMF 996
            K K  +RWR  RM ED+VN  G +MYP+V  GP+GYD  +G  P+ERP TLG+     RR +V+E WSP++VACFEGAI + GK F++++  +  KS  + IEFYY+WK T+HY+QWK  F
Sbjct:   91 KGKPVERWRAQRMAEDYVNLVGDLMYPKVSFGPYGYDMAKGEIPLERPNTLGVLMCPARRRTVMEHWSPFEVACFEGAIVLVGKNFYEISKLLPSKSTKECIEFYYVWKMTSHYQQWKRSF 211

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BLAST of mRNA_H-paniculata_contig5240.12610.1 vs. uniprot
Match: A0A7S3HK57_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HK57_9STRA)

HSP 1 Score: 146 bits (369), Expect = 4.540e-38
Identity = 67/134 (50.00%), Postives = 88/134 (65.67%), Query Frame = 1

Query:  586 KRRLLLDGTHPRGPSTKAKDTQRWRTHRMVEDFVNTCGRIMYPQVRVGPFGYDPCQGRFPMERPTTLGITRTEVRRPSVIEKWSPYQVACFEGAISIHGKVFHKVAGQVDGKSVPDVIEFYYMWKKTNHYKQWK 987
            K  +    TH     +  K+  RWR H + ED+VN  G IMYP+   GP+GYD   GRFP+E+ ++LG     +R+P+VIEKWSP +VA FE A++++GK FH V   V  KS  +VIEFYY WKKTNHYK+WK
Sbjct:   49 KLNVAKHATHHAHLQSSGKNNDRWRPHGITEDYVNIIGEIMYPKQTFGPYGYDAENGRFPVEKMSSLGWLLCPLRKPTVIEKWSPIEVAVFEAAMTLYGKNFHTVQKYVKTKSTQEVIEFYYDWKKTNHYKEWK 182

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BLAST of mRNA_H-paniculata_contig5240.12610.1 vs. uniprot
Match: A0A7S0KBC3_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus aporus TaxID=1398097 RepID=A0A7S0KBC3_9STRA)

HSP 1 Score: 151 bits (381), Expect = 8.230e-38
Identity = 66/129 (51.16%), Postives = 92/129 (71.32%), Query Frame = 1

Query:  601 LDGTHPRGPSTKAKDTQRWRTHRMVEDFVNTCGRIMYPQVRVGPFGYDPCQGRFPMERPTTLGITRTEVRRPSVIEKWSPYQVACFEGAISIHGKVFHKVAGQVDGKSVPDVIEFYYMWKKTNHYKQWK 987
            L G   +  +T+ K+  RWR HR  ED+++  G IMYP    G FGY+  +G +P+ERP TLG+  + +RRP+VIEKWSPY+VA FE A++++GKVFH V   V  KS  +++EFYY+WKKT+HYK+WK
Sbjct:  227 LPGVESKRNNTQIKE-YRWRAHRAAEDYISLVGDIMYPGTYFGAFGYNSDKGNYPVERPNTLGLLTSPLRRPTVIEKWSPYEVASFEAALTLYGKVFHSVQKVVKTKSTKEIVEFYYVWKKTSHYKRWK 354

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BLAST of mRNA_H-paniculata_contig5240.12610.1 vs. uniprot
Match: A0A7S4RT22_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4RT22_9STRA)

HSP 1 Score: 146 bits (368), Expect = 5.810e-37
Identity = 59/116 (50.86%), Postives = 84/116 (72.41%), Query Frame = 1

Query:  649 QRWRTHRMVEDFVNTCGRIMYPQVRVGPFGYDPCQGRFPMERPTTLGITRTEVRRPSVIEKWSPYQVACFEGAISIHGKVFHKVAGQVDGKSVPDVIEFYYMWKKTNHYKQWKDMF 996
            QRWR H+M +D++   G IMYP   +GP+ Y    G++P+ER TTLG+     RRPS IEKWSPY++A FE ++S++GKVFHKV   V  K+  ++IEFYY+WKK++HY++WK  +
Sbjct:  116 QRWRAHQMADDYITLAGNIMYPSTYLGPYAYTHTHGQYPIERLTTLGLLTNPCRRPSPIEKWSPYEIAMFEASLSLYGKVFHKVQKIVRSKTTKEIIEFYYIWKKSSHYRRWKGQY 231

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BLAST of mRNA_H-paniculata_contig5240.12610.1 vs. uniprot
Match: A0A7S2R001_9STRA (Hypothetical protein (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2R001_9STRA)

HSP 1 Score: 141 bits (355), Expect = 7.240e-37
Identity = 55/111 (49.55%), Postives = 81/111 (72.97%), Query Frame = 1

Query:  664 HRMVEDFVNTCGRIMYPQVRVGPFGYDPCQGRFPMERPTTLGITRTEVRRPSVIEKWSPYQVACFEGAISIHGKVFHKVAGQVDGKSVPDVIEFYYMWKKTNHYKQWKDMF 996
            HRM E++++  G +M P   +GPFGYDP QG++P+ER T  G+  + +RRP+V+EKWSPY++A FE A++  GK FH+V   +  KS  +++EFYY+WKKT+HYK WK  +
Sbjct:   12 HRMAEEYISLAGELMLPGTHLGPFGYDPAQGKYPIERITAYGVLTSPLRRPTVVEKWSPYEIATFEAAVAFLGKQFHRVQKLIRTKSTKEIVEFYYIWKKTHHYKMWKKQY 122

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BLAST of mRNA_H-paniculata_contig5240.12610.1 vs. uniprot
Match: A0A448Z6P5_9STRA (SANT domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z6P5_9STRA)

HSP 1 Score: 143 bits (361), Expect = 3.090e-35
Identity = 58/127 (45.67%), Postives = 90/127 (70.87%), Query Frame = 1

Query:  637 AKDTQRWRTHRMVEDFVNTCGRIMYPQVRVGPFGYDPCQGRFPMERPTTLGITRTEVRRPSVIEKWSPYQVACFEGAISIHGKVFHKVAGQVDGKSVPDVIEFYYMWKKTNHYKQWKDMFHKEQAIL 1017
            AK  +RWR H+M ED+    GR+MYP  +   +GYDP   ++PME+ + L   ++ +RRP++IEKWSPY++A FEG++  +GK F +V+ Q+  K+  +VI+FYY+WKKT HYK+WK+ F  ++ +L
Sbjct:  212 AKPNERWRVHQMAEDYTTLVGRMMYPVTQFNNYGYDPLMRQYPMEKISLLSFIQSPLRRPTIIEKWSPYEIAVFEGSLFHYGKEFREVSKQIGTKTTREVIDFYYIWKKTGHYKKWKEQFISDEDLL 338

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig5240.12610.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig5240.12610.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FK88_ECTSI	3.780e-60	68.97	SANT domain-containing protein n=1 Tax=Ectocarpus ...	[more]
A0A6H5KPS5_9PHAE	6.890e-60	68.92	SANT domain-containing protein n=1 Tax=Ectocarpus ...	[more]
A0A835Z5U6_9STRA	7.410e-44	53.38	SANT domain-containing protein n=1 Tax=Tribonema m...	[more]
A0A6U0ZH30_9STRA	4.810e-41	49.64	Hypothetical protein n=1 Tax=Rhizochromulina marin...	[more]
A0A4D9CXF5_9STRA	2.660e-38	52.07	SANT domain-containing protein n=2 Tax=Monodopsida...	[more]
A0A7S3HK57_9STRA	4.540e-38	50.00	Hypothetical protein n=1 Tax=Spumella elongata Tax...	[more]
A0A7S0KBC3_9STRA	8.230e-38	51.16	Hypothetical protein n=1 Tax=Leptocylindrus aporus...	[more]
A0A7S4RT22_9STRA	5.810e-37	50.86	Hypothetical protein n=2 Tax=Ditylum brightwellii ...	[more]
A0A7S2R001_9STRA	7.240e-37	49.55	Hypothetical protein (Fragment) n=1 Tax=Eucampia a...	[more]
A0A448Z6P5_9STRA	3.090e-35	45.67	SANT domain-containing protein n=1 Tax=Pseudo-nitz...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig5240	contig	H-paniculata_contig5240:7376..14367 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Properties


Property Name	Value
Taxonomic scope	Eukaryota
Seed ortholog score	218.4
Seed ortholog evalue	6.9e-54
Seed eggNOG ortholog	2880.D7FK88
Preferred name	RCOR3
KEGG ko	ko:K11829
KEGG Pathway	ko05016,map05016
Hectar predicted targeting category	other localisation
GOs	GO:0000122,GO:0000785,GO:0000981,GO:0000982,GO:0001067,GO:0001078,GO:0001227,GO:0002262,GO:0002376,GO:0002520,GO:0002682,GO:0002684,GO:0003674,GO:0003676,GO:0003677,GO:0003682,GO:0003700,GO:0003712,GO:0003714,GO:0003824,GO:0004407,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005667,GO:0005694,GO:0006325,GO:0006355,GO:0006357,GO:0006464,GO:0006476,GO:0006807,GO:0006950,GO:0006996,GO:0007154,GO:0007165,GO:0007166,GO:0007219,GO:0007221,GO:0007275,GO:0007596,GO:0007599,GO:0008134,GO:0008150,GO:0008152,GO:0008593,GO:0009611,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009966,GO:0009967,GO:0009987,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0010638,GO:0010639,GO:0010646,GO:0010647,GO:0016043,GO:0016569,GO:0016570,GO:0016575,GO:0016787,GO:0016810,GO:0016811,GO:0017053,GO:0019213,GO:0019219,GO:0019222,GO:0019538,GO:0019899,GO:0023051,GO:0023052,GO:0023056,GO:0030097,GO:0030099,GO:0030154,GO:0030218,GO:0031056,GO:0031057,GO:0031060,GO:0031061,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031399,GO:0031400,GO:0031935,GO:0031937,GO:0031974,GO:0031981,GO:0032268,GO:0032269,GO:0032501,GO:0032502,GO:0032991,GO:0033043,GO:0033044,GO:0033558,GO:0034101,GO:0035065,GO:0035067,GO:0035601,GO:0036211,GO:0042060,GO:0042592,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0044212,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044446,GO:0044464,GO:0045595,GO:0045597,GO:0045637,GO:0045639,GO:0045652,GO:0045654,GO:0045747,GO:0045892,GO:0045893,GO:0045934,GO:0045935,GO:0045944,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048534,GO:0048583,GO:0048584,GO:0048731,GO:0048856,GO:0048869,GO:0048872,GO:0050789,GO:0050793,GO:0050794,GO:0050817,GO:0050878,GO:0050896,GO:0051052,GO:0051054,GO:0051094,GO:0051128,GO:0051129,GO:0051130,GO:0051171,GO:0051172,GO:0051173,GO:0051239,GO:0051240,GO:0051246,GO:0051248,GO:0051252,GO:0051253,GO:0051254,GO:0051276,GO:0051716,GO:0060255,GO:0060968,GO:0061085,GO:0061086,GO:0065007,GO:0065008,GO:0070013,GO:0070933,GO:0071704,GO:0071840,GO:0080090,GO:0090239,GO:0090241,GO:0090308,GO:0090309,GO:0097159,GO:0098732,GO:0140096,GO:0140110,GO:1901363,GO:1901564,GO:1901983,GO:1901984,GO:1902275,GO:1902679,GO:1902680,GO:1903506,GO:1903507,GO:1903508,GO:1903706,GO:1903708,GO:1905268,GO:1905269,GO:1990391,GO:2000026,GO:2000112,GO:2000113,GO:2000618,GO:2000619,GO:2000756,GO:2000757,GO:2001141,GO:2001251,GO:2001252
EggNOG free text desc.	transcription corepressor activity
EggNOG OGs	KOG1194@1,KOG1194@2759
Ec32 ortholog description	SANT/Myb domain transcription factor
Ec32 ortholog	Ec-17_003180.1
COG Functional cat.	K
Best tax level	Eukaryota
Best eggNOG OG	NA\|NA\|NA
BRITE	ko00000,ko00001
Exons	2
Model size	1364
Cds size	1362
Stop	0
Start	0

Relationships

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622930523.280279-CDS-H-paniculata_contig5240:7375..8260	1622930523.280279-CDS-H-paniculata_contig5240:7375..8260	Halopteris paniculata Hal_grac_a_UBK monoicous	CDS	H-paniculata_contig5240 7376..8260 +
1691481330.807466-CDS-H-paniculata_contig5240:7375..8260	1691481330.807466-CDS-H-paniculata_contig5240:7375..8260	Halopteris paniculata Hal_grac_a_UBK monoicous	CDS	H-paniculata_contig5240 7376..8260 +
1622930523.2958584-CDS-H-paniculata_contig5240:13890..14367	1622930523.2958584-CDS-H-paniculata_contig5240:13890..14367	Halopteris paniculata Hal_grac_a_UBK monoicous	CDS	H-paniculata_contig5240 13891..14367 +
1691481330.8178968-CDS-H-paniculata_contig5240:13890..14367	1691481330.8178968-CDS-H-paniculata_contig5240:13890..14367	Halopteris paniculata Hal_grac_a_UBK monoicous	CDS	H-paniculata_contig5240 13891..14367 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig5240.12610.1	prot_H-paniculata_contig5240.12610.1	Halopteris paniculata Hal_grac_a_UBK monoicous	polypeptide	H-paniculata_contig5240 7376..14367 +

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at H-paniculata_contig5240:7376..14367+
coding sequence from alignment at H-paniculata_contig5240:7376..14367+

protein sequence of mRNA_H-paniculata_contig5240.12610.1

>prot_H-paniculata_contig5240.12610.1 ID=prot_H-paniculata_contig5240.12610.1|Name=mRNA_H-paniculata_contig5240.12610.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=454bp
FQDSESSSDTTASSSTAAAASVTSTALPPTPATAAAGYAAATAAAADPGA
LGRRSRRPGGGSGPVNTATTSLGSPLSSNNGRHAPAGAGVAATSPVARVE
TLSSAGTKRVGGAGGSEGGVSGPVKKRSRPSAKEEGRGVGAGAAASSGGS
AQAGGVGGVVGGKAAPEKVTRGRGRPPGKGRGGGNSNSNSTKGRGKRRLL
LDGTHPRGPSTKAKDTQRWRTHRMVEDFVNTCGRIMYPQVRVGPFGYDPC
QGRFPMERPTTLGITRTEVRRPSVIEKWSPYQVACFEGAISIHGKVFHKV
AGQVDGKSVPDVIEFYYMWKKTNHYKQWKDMFHKEQAILQGSESDSGDDG
SEFEQNTASSATSGSGSVASVERTEITRGSSLAAAAKSSKGRKNGGRGTG
GGRGSGRGSGGGRGGGGSGRGSGGGRGGSSGGGRGGAGGSGGGRGGGGAR
GGGR

mRNA from alignment at H-paniculata_contig5240:7376..14367+

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_H-paniculata_contig5240.12610.1 ID=mRNA_H-paniculata_contig5240.12610.1|Name=mRNA_H-paniculata_contig5240.12610.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=6992bp|location=Sequence derived from alignment at H-paniculata_contig5240:7376..14367+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
TTCCAAGATTCAGAATCGTCATCAGACACAACAGCATCCTCATCAACAGC
AGCAGCAGCTTCAGTAACATCCACAGCTTTACCGCCGACCCCAGCCACCG
CCGCCGCTGGCTACGCCGCAGCAACTGCAGCAGCAGCCGACCCCGGCGCG
CTCGGTCGGCGCTCGCGTAGGCCCGGAGGTGGCAGCGGCCCCGTCAACAC
CGCCACGACATCTCTAGGATCTCCCCTCTCCTCTAACAACGGTCGGCATG
CCCCTGCCGGCGCCGGCGTTGCCGCAACAAGTCCAGTAGCACGTGTCGAA
ACTTTGTCTTCTGCAGGGACCAAGCGGGTGGGAGGAGCCGGCGGGAGTGA
GGGTGGGGTTAGTGGGCCCGTGAAAAAGAGAAGTAGGCCTTCGGCTAAGG
AGGAAGGGCGGGGGGTTGGAGCCGGAGCGGCTGCGTCGTCGGGCGGGAGT
GCGCAGGCGGGGGGAGTGGGGGGGGTCGTGGGAGGGAAGGCTGCGCCCGA
AAAGGTTACTCGTGGGCGCGGGCGGCCGCCGGGGAAGGGACGCGGTGGCG
GCAACAGTAACAGTAACAGCACCAAGGGCAGGGGGAAGCGACGGTTGCTG
CTAGACGGGACGCATCCGCGAGGACCGAGTACGAAGGCTAAGGACACTCA
GAGATGGCGCACGCACCGTATGGTGGAGGACTTTGTGAACACTTGCGGGA
GGATTATGTACCCTCAGGTACGAGTCGGACCGTTCGGCTACGATCCGTGC
CAGGGGAGATTTCCGATGGAGCGGCCGACAACCCTGGGGATAACGCGCAC
GGAGGTGCGGCGACCGAGTGTGATTGAGAAGTGGAGCCCTTATCAGGTTG
CTTGCTTTGAAGGAGCCATCAGTATTCACGGGAAGGTGAGAGAGAGAGCT
AGAGGGAGAGAGAGAGAAATGAGCAATCATAATTCGGTAGATTTCAGCTG
AGAGACCCGGCGTTGTTCCGGATCTGTGTGTAGTTTTAAGGTTTTTGTTG
GTTTTGCGTGTAGTTTGTAGTACGTACATAGTAGAATGTTAGAAGTTTTC
CATGTACGTGTAGCTAGCTAACGCGGTCGCCAAACCTACTAGTAAAACAA
GCTCGTTTGGGGGATGACTTCATGGCGAGGTTATGTTTCGATGTTGAGAT
TTTGAGTGCGATGAGCATGTCGAAGGGTGTCCGCCAGTGCTGACTTTCGT
TTGTGCCTGATTTTCACCGAATTTGGCTCGAGTTAGTTAAGAAGAAAATG
ACCTATTTCATGGGGGCGAAAAAGTGAAATTCACCTCAACATATACCCTA
GGTTTTGATGATTTTCTCCTCCTCTTTCCTCCTCCAACTGTTTTTTTTGT
CCTTGGATACCAACCACTCCCTCCTCTTGTGTACGTTTTCGGGAATTTCC
TGAGGTACAAAGCTGATTTGTCATCCTCGTTACGGAAGATATCACCCCCT
TCCCCCCCCCCCCCCCCGCGCGCGCCTCCTCTTCCTAATGTGGAGGATGC
CGTTATTTTTGTTCGTCGCGGAGCACTTCACCTGTCAGAACCTTTGGTCC
GAAGTTGGGAATGTAATATCTCGGTTTTTAAGTACTATTATCACACGGTG
GGAGCGACGGTCCCATCCGCTTGTCGGCGTTGGAGCCCACGGCCGTTTAT
GATTAATTTCTCCCTTCCTCATGCCCTTTATCAGTGCTTCGTACTAACAA
AATGTTTTCCTGATCCATTTGGGAAGAAAAATCCTGGGAGTGCAGGGAAT
TGAACCCATAACGTACCAACTGGATGAATTTGTGAACTATCCTTTTGATT
ACGGTACCCGCGGTCACTGGGATTATCACCACCCATGAAAATGGATCATG
ACGTTTAGGATGAGATAGTCCCACAAAGAGCGCTGGCGAAAGTTATGGCC
CACGCACACCTCACCACAAAACCAACGTGAGGTATATGGAAAGCCGCAAC
GAGGATGCATAGAGCACTGCCACAGGCTAGAACGAGGGGCGGCGTGACAT
ACCTAACCTATGTTGCATGCTTGTTGTGACTCCGCCCCGTGCCTATGGCC
GGCATCTGATGGCTCTGCCATCACCCGGTGTTACCGTAGATACCCATCCT
ATAAGAGGATATGGGACCTTATAAGTAGAAAATGCAGTGTATGTGCAGTC
CAAGTTACCTCGAGAGGAAACAAGAAAGGATTGTACGGCATTCCCCCCCC
CCGCCAAATCGCAGGTAGGTCGGATATAGCTGACAATTTTTTGGGCCATA
TTTAGCGATGTAGGAAAGAGCGATTGGATTAGCTTTAATCGGAGATCGCT
CTGACAAGAATAAAGCTACGTACGTACGTCCTCCCAAGGATGCGTGGTCA
ATGATCTAACAACTAACTATGACTGCAAAACATGAATACCCCCCTTCCCC
CTTCCCCCTTATTGGTCATTATCTAATTTTGCTGATAACTGTAGACAGCT
GAAGGCTGAGGTCACCTGTATAACCTCCCTCAACATGAGTACAATAGAGT
CATTATAAAAGCGTTCGGGCTTAGGTCTACGTACTGGGTATCCCTCCCTC
CTCCCCTATATTGCTCTCGCCGCAGGGAAGTTGTCTAATGTAACCTACGA
CGGGTCTGACAACGGTTAACAGTCGCCCCCCATTTGGCTATATGTCCAAT
GCGAGCGGCATACTGCATCACTTTTTTTTTTTTATCTGCTTTTAGCCGAA
TCTTTCATAACCCCGTTGTACGGCAAACAAACTCGTCGAGAAATCCTGCA
AGTAATATGTTTTTGTACAATTACTGGTCATACTCCAGGATACTTTTTTC
TCTCAGTTTGACTGGATTTTTATTTCTAATTAGATTATGGATATAAACAA
AATGAAAAGCACTTACAATATTAACCTTTTAAAACGCAGTCTGGACTGCC
AACCCCCCCAGGATATCGCTCCGTTCAGCGTATTTAGTATCTGGGGATGC
GAGGTCAATACGTTCGGATTATGTAAAAATATGGGATAGGTTTTTATCAT
AGTGAAACCATTTGAGAATATGCGGATTTTTTTCGGAACGGTTTTGGATA
TTGTAAACAGCAACGCCAAAAAAGGTACGTTTGTTCTTTTTTATGTATAT
GAGTCATAGTTTAAAAAAGATACGGATATTAGAGATGGAGTATGACCTAC
TTGGGGCTCAAAATCAGTGTTTTTCCGTATTTCGCGTGCCCGTGCACGGA
TAAATCGAGTTTTGAAGTAATCAGTGTTTCAGTTTGTTGGAAGGCTTGTG
GCCAAGGGGTTAGATGTCATGTGGTTTCGCGCAATACAATGACCATGCAG
CAGCACCCAACAGAGTTTGGGAATTTCGATGGTTGGAAGATTTTATTTGC
GGCGGCAAATTCTTTAATGTGAGATATTTAAATACCGGATTTCCGTTTTT
TCTCAAGAAATGATATGCGGAACTCCACCTACATGAAACGGAGTTTTGGG
AACACTCCCTGTTTCAAAGATGTTCTTATGCGGCGGAAAAAAAAATGATA
AAAATCAGATTAAATATGCGTGAATTCCGTTTTTGAAAGATTTTACGTGC
TGTAATTCCGTATATCAAATATTCAATATTGCAGGAAATCCATTTTTAAG
ATTCAACATGCAAATCTTCGGGTGTTTTTTTTTGGAAATAAATTACATGC
GGCGGGTCTTTTTTATATACATTTCAACATGCGGACATTCCGCTTTTCAA
GGATTTAAAGGCAGAAGTCCTTTTTAACGGTAGCCCCCATGTTGATCTAT
TTTTGCTGATACGTCTATTCTGCTCTTCTACCACGAATAGAAGTCGATTG
AGTTTTTTGGCAGATCATATTTCCAGATCTAAAACTTTTCAAAGGCTGCG
GATGGAATGGTTGGAAAAAATCTAGAATACAGACGATTCTCATAGGACAT
TCCGATTTCTGATTCCGATAATTTTTTTCCGAATAACTCAAACTTAACCC
GGTTTCGGACATTTCTGGCCGGTTTGTCGCTGGACTACCATCGCCCACAA
AGCACATCAGTGCGATGGACTAGCCCATCAACACGCCTCCGCGCGGCAAC
CGAGGGCCAGAGCTTCCCCTGGGCCGCCGTTACGCGATTGTGATCGGGAT
TGCGATGGCATTCCCGCCGGGCTAAATAAAGTAGATTGCTCAGGGGAAAA
ACAGTTAAAATCGCAGCAGCTAGGTACATTTTTTTTTTTTTTAAGGTCTA
AATTTGACCTTTTTTAACCGACATCTCTTCATTTGCGCTGCACTTGCTCC
CGACGGATGTCGCTAATTTCCGTGAAATGGCTGGGATCAATCTCAATAAG
CATGTAGGATTATAACTAGTTGAAAGAAGAAACATGGGAGATGGTTACAT
ATGCCTCTATAAACTCAACCGACTTTTACTCACGGCACAGAGAAGTTGGA
AGTACAGGTTAAAGTAGCATAACTATAACATGTGTATCTTTATATGAGGT
TCAGAGTTATACCCTCCCTTCTTGATTATTATCTAATCATTTTTTGCTGA
TAATTGTAAACAACTGATCTTTAAAGTCAGTTGCATAACCTATCTCAACA
TGGGTACCCCCCCCCTGAGCACCCTCCCACAGCTGTCACCTCCACGTCCT
TCCTGTTTCGGCCTCTTGAGCCGCGGTCGTTCTGACCATCATCATTAATG
TCTGCTAGAGACGACGTCACCGTCAAAATTTCGTCGTGGTTGCGGGTTGT
CGGTTTCCAATGCAACGTTGCTTCGTTTTCCCCAGTTCGTGAGGAGTGCC
GCTTTCAGTGTAGTAACGCGGGTGCCTGGTGCATGTCGCCGTCATTGGCT
TCGAATTCGAATTTGAACGAGTATGTCGCGCACTGCCCATTTTGGATATA
CAAAACGGCACGGATAATATCCAGCGGGAGTCCTGTACAAAATGGCGTGG
GTGCTGAACACCGCAATTACTTGACGAAAAAAAATGAAATGATAAGAAAC
AAACACGGACAAACAAAAGTGTGCGACTTGTTTTGATTGGTCATTTTCCA
AAATCCGACCGACTGGATAAGGTCGTCAGACCGAGCTGATTAGATGTTCA
AAAGTCACTCCCTTTGTCTTCGTCCTCGCCCCCCCCCCCCCTGCCAAAAC
ATTTCAAGATACAATTAATTAATTAATTAAAGCATTTGTTCTCTCTACCC
CCCTCTCTCTTTTTGTATACTTCCTCTGTGCCAAAAGTGAAGGCGGTTAA
GTTTTTATAGAGGTACATAACCATCATATATTATTTCACATGTGTATGAG
GTTGATCCCAAATTGCATGGAAATTGGTGAAATCCATCGGGAGCGCGTAC
CACGCAAAAAAAAAAAAAAAAACTAAAAAAGGCCACATTTTCGCCCTTTT
TCGTATCTTCCCAATCGAAACAAACGTGAAGATGATCAAAATTAACCCAA
CCATCTTGAGCAGTCATTAATCCTGACCCACAAATTGGAATGCACCTTTG
GAATAGCGCATATGAGTCTATCAGATTTCAGCGTTCTGTCGGATTCCAAC
CACAGCCTCTGACAATCATATCTAGAGTTATAATCTGCCAAACATAACCG
AATTTACTTGTGGCATAAGAGAAATTAGATTTCGCCCCCCCCCCCCAACC
GAACAATTACGAACAAGTAATGGGCAATATTAAGGAGGACTTTTTTTTTT
TTTTGCTTTTTTCAAACTTCCGTTTATTTATTTATTTATTTATTTATTTT
TTCAATCGTAAATTTTAGCTAAATATAAACGTCGTGTTGAAAGGGTCTTT
GACTTTCAGACCCTGGTGAAACCTGCGCATAGGTGTAATTCTTCATTTTT
TTTAGCCGATTTTTTACGAGGTAAAAGCTGGAATTTTGATTAAATATTGT
GAATCCCAAAAAAAAAACTTAAAAAAGTTTTCCTTCTGTTGTTTTTTCAA
AGTCGAGAATTCTGCGTACATGCTACGAATGCTAACCCAAATTGATGTCG
GTCGTATCTAGTTCTCGAGAGTGTGAAATATGATCTAGTTGGGACCGAGA
TTCCTCAAAGCATTGTCGTATATACATATATTTTTTTGTGTTAGCTAAAA
TCATTTCACCCGTGTTGTATTGTCCCTCCCGAACACACTTTTTCCCTTGG
GACACACACACAAAACTATTACAGCAGAGGATGAAAATGTTGTTGAACGC
TTAGCCCTGAATGACGTTTATAATAGAACTACCAACCATAGGGAAGGCAT
GGCTGTAATTTGCTAGTGGCGTATAGCTAGCTCGGACCCGCTCAAAGCTT
TCCCTATCACGAGCCCTTGAAAAATACGCTTGGACATAGTCTGGAAATTA
TTCGGTGAGGATGCCATATGATGGTGATTATGATTGCCGCATTCGTTAGT
AAGGATCGATGTATTTTCCAATAGGCAACACCATCTATCTAAGCAGACAC
ATTCATGTAAGCACCCATCCACCCACCCATATCAGTGTATTTTCCAATAC
AGCATCCAAACAAATAGGCACACATGTCCACCCACCCCCCCAACTCCACG
CACACAAAATCACAGGTCTTCCATAAGGTAGCCGGGCAGGTGGACGGCAA
GAGCGTGCCCGACGTGATCGAGTTCTACTACATGTGGAAAAAGACCAATC
ACTACAAGCAGTGGAAGGACATGTTTCACAAGGAACAGGCCATTCTCCAG
GGCTCGGAGAGCGATAGCGGCGACGACGGCAGCGAATTCGAGCAAAACAC
TGCCTCGTCCGCAACCAGCGGGAGCGGCAGCGTCGCATCCGTCGAACGCA
CAGAAATTACCAGAGGCTCTTCTCTAGCAGCCGCCGCCAAGAGCTCGAAG
GGGCGGAAAAACGGAGGACGAGGTACGGGCGGCGGCAGAGGATCAGGCAG
AGGCAGCGGTGGCGGGAGAGGGGGGGGCGGTAGCGGCCGAGGGAGTGGCG
GGGGACGAGGGGGTAGCAGTGGGGGTGGGCGAGGAGGTGCCGGAGGGAGT
GGGGGAGGGCGCGGGGGGGGGGGCGCGAGGGGGGGGGGGAGG

Coding sequence (CDS) from alignment at H-paniculata_contig5240:7376..14367+

>mRNA_H-paniculata_contig5240.12610.1 ID=mRNA_H-paniculata_contig5240.12610.1|Name=mRNA_H-paniculata_contig5240.12610.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2724bp|location=Sequence derived from alignment at H-paniculata_contig5240:7376..14367+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
TTCCAAGATTCAGAATCGTCATCAGACACAACAGCATCCTCATCAACAGC
AGCAGCAGCTTCAGTAACATCCACAGCTTTACCGCCGACCCCAGCCACCG
CCGCCGCTGGCTACGCCGCAGCAACTGCAGCAGCAGCCGACCCCGGCGCG
CTCGGTCGGCGCTCGCGTAGGCCCGGAGGTGGCAGCGGCCCCGTCAACAC
CGCCACGACATCTCTAGGATCTCCCCTCTCCTCTAACAACGGTCGGCATG
CCCCTGCCGGCGCCGGCGTTGCCGCAACAAGTCCAGTAGCACGTGTCGAA
ACTTTGTCTTCTGCAGGGACCAAGCGGGTGGGAGGAGCCGGCGGGAGTGA
GGGTGGGGTTAGTGGGCCCGTGAAAAAGAGAAGTAGGCCTTCGGCTAAGG
AGGAAGGGCGGGGGGTTGGAGCCGGAGCGGCTGCGTCGTCGGGCGGGAGT
GCGCAGGCGGGGGGAGTGGGGGGGGTCGTGGGAGGGAAGGCTGCGCCCGA
AAAGGTTACTCGTGGGCGCGGGCGGCCGCCGGGGAAGGGACGCGGTGGCG
GCAACAGTAACAGTAACAGCACCAAGGGCAGGGGGAAGCGACGGTTGCTG
CTAGACGGGACGCATCCGCGAGGACCGAGTACGAAGGCTAAGGACACTCA
GAGATGGCGCACGCACCGTATGGTGGAGGACTTTGTGAACACTTGCGGGA
GGATTATGTACCCTCAGGTACGAGTCGGACCGTTCGGCTACGATCCGTGC
CAGGGGAGATTTCCGATGGAGCGGCCGACAACCCTGGGGATAACGCGCAC
GGAGGTGCGGCGACCGAGTGTGATTGAGAAGTGGAGCCCTTATCAGGTTG
CTTGCTTTGAAGGAGCCATCAGTATTCACGGGAAGTTCCAAGATTCAGAA
TCGTCATCAGACACAACAGCATCCTCATCAACAGCAGCAGCAGCTTCAGT
AACATCCACAGCTTTACCGCCGACCCCAGCCACCGCCGCCGCTGGCTACG
CCGCAGCAACTGCAGCAGCAGCCGACCCCGGCGCGCTCGGTCGGCGCTCG
CGTAGGCCCGGAGGTGGCAGCGGCCCCGTCAACACCGCCACGACATCTCT
AGGATCTCCCCTCTCCTCTAACAACGGTCGGCATGCCCCTGCCGGCGCCG
GCGTTGCCGCAACAAGTCCAGTAGCACGTGTCGAAACTTTGTCTTCTGCA
GGGACCAAGCGGGTGGGAGGAGCCGGCGGGAGTGAGGGTGGGGTTAGTGG
GCCCGTGAAAAAGAGAAGTAGGCCTTCGGCTAAGGAGGAAGGGCGGGGGG
TTGGAGCCGGAGCGGCTGCGTCGTCGGGCGGGAGTGCGCAGGCGGGGGGA
GTGGGGGGGGTCGTGGGAGGGAAGGCTGCGCCCGAAAAGGTTACTCGTGG
GCGCGGGCGGCCGCCGGGGAAGGGACGCGGTGGCGGCAACAGTAACAGTA
ACAGCACCAAGGGCAGGGGGAAGCGACGGTTGCTGCTAGACGGGACGCAT
CCGCGAGGACCGAGTACGAAGGCTAAGGACACTCAGAGATGGCGCACGCA
CCGTATGGTGGAGGACTTTGTGAACACTTGCGGGAGGATTATGTACCCTC
AGGTACGAGTCGGACCGTTCGGCTACGATCCGTGCCAGGGGAGATTTCCG
ATGGAGCGGCCGACAACCCTGGGGATAACGCGCACGGAGGTGCGGCGACC
GAGTGTGATTGAGAAGTGGAGCCCTTATCAGGTTGCTTGCTTTGAAGGAG
CCATCAGTATTCACGGGAAGGTCTTCCATAAGGTAGCCGGGCAGGTGGAC
GGCAAGAGCGTGCCCGACGTGATCGAGTTCTACTACATGTGGAAAAAGAC
CAATCACTACAAGCAGTGGAAGGACATGTTTCACAAGGAACAGGCCATTC
TCCAGGGCTCGGAGAGCGATAGCGGCGACGACGGCAGCGAATTCGAGCAA
AACACTGCCTCGTCCGCAACCAGCGGGAGCGGCAGCGTCGCATCCGTCGA
ACGCACAGAAATTACCAGAGGCTCTTCTCTAGCAGCCGCCGCCAAGAGCT
CGAAGGGGCGGAAAAACGGAGGACGAGGTACGGGCGGCGGCAGAGGATCA
GGCAGAGGCAGCGGTGGCGGGAGAGGGGGGGGCGGTAGCGGCCGAGGGAG
TGGCGGGGGACGAGGGGGTAGCAGTGGGGGTGGGCGAGGAGGTGCCGGAG
GGAGTGGGGGAGGGCGCGGGGGGGGGGGCGCGAGGGGGGGGGGGAGGGTC
TTCCATAAGGTAGCCGGGCAGGTGGACGGCAAGAGCGTGCCCGACGTGAT
CGAGTTCTACTACATGTGGAAAAAGACCAATCACTACAAGCAGTGGAAGG
ACATGTTTCACAAGGAACAGGCCATTCTCCAGGGCTCGGAGAGCGATAGC
GGCGACGACGGCAGCGAATTCGAGCAAAACACTGCCTCGTCCGCAACCAG
CGGGAGCGGCAGCGTCGCATCCGTCGAACGCACAGAAATTACCAGAGGCT
CTTCTCTAGCAGCCGCCGCCAAGAGCTCGAAGGGGCGGAAAAACGGAGGA
CGAGGTACGGGCGGCGGCAGAGGATCAGGCAGAGGCAGCGGTGGCGGGAG
AGGGGGGGGCGGTAGCGGCCGAGGGAGTGGCGGGGGACGAGGGGGTAGCA
GTGGGGGTGGGCGAGGAGGTGCCGGAGGGAGTGGGGGAGGGCGCGGGGGG
GGGGGCGCGAGGGGGGGGGGGAGG