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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Model size | 1433 |
| Cds size | 1011 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig5240.12609.1 >prot_H-paniculata_contig5240.12609.1 ID=prot_H-paniculata_contig5240.12609.1|Name=mRNA_H-paniculata_contig5240.12609.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=337bp
MGDNGLGQSGRLKRSREDMIDKAPGGTKPSKSPASNQQDKLDRDNTSNFA
RGGQQLQQQQSRSSAFCSAGPTATVSVVSTTRPAPRARAESDDMDIDEEG
LGPETEEQRRPPPPGKFSIRGNIVGYSDAVRAAGGVGRRELTAAVSNSAN
GTILDNGSNGDDDRADTARKIERQVVRAIGVGSSAAANGSSGSSTGTAAG
MLVSVSGETPITNNNDNDNNNNNRWGADLRRREKHSRKGQDLPCTDCHGR
RYSWGRHHEGQWERQEQDSHAASRGAKVICGERRCCGDHFKDVRRSRNCP
AAARSVFKNGTADCLFSIVVGEAESRNVNRSQRRWQ* back to topmRNA from alignment at H-paniculata_contig5240:5535..6987+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig5240.12609.1 ID=mRNA_H-paniculata_contig5240.12609.1|Name=mRNA_H-paniculata_contig5240.12609.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1453bp|location=Sequence derived from alignment at H-paniculata_contig5240:5535..6987+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GGCTATCGAATCCAGACGCAAAGGATACCGCGTTAGGCTGAGAGACGTCC
ACTTCCCTCTCCATCATCGCAGCTGGAGCGTGAGATCTCTTTTACTCGTG
GAGATATCCAGGAGCTGAGCAGGAACAGCAGTGTGTGTGTGTGTCTGTGT
GTGTGTCTATGTGCACAGAAGACACACACAAATTGAAAAAAAACGTGCGA
AACAGACATCAAAAAGCTTTAAAAAACTGACTGTATTGTAACAAGGACCG
AGGCGGCGGGCGTACGCTTTGGAGGAGAGCGAAAGCAAGAGATAGATAGG
GAGAGCAAGAACGAGACTTTTCAACCTCTCACAGGATGGGTGATAACGGG
CTGGGGCAATCGGGCCGCCTCAAGCGCTCCCGGGAAGACATGATCGACAA
GGCTCCGGGCGGCACCAAACCTTCGAAGTCTCCGGCTTCGAACCAACAAG
ATAAACTCGACCGGGACAACACATCCAATTTTGCGCGGGGAGGGCAGCAG
CTGCAGCAGCAGCAGTCGCGATCATCAGCTTTCTGCTCGGCAGGACCTAC
CGCCACGGTGAGTGTGGTCAGCACAACGCGTCCCGCACCACGTGCTCGGG
CAGAATCGGACGATATGGACATAGATGAGGAAGGATTGGGGCCTGAGACC
GAGGAGCAGCGCAGGCCTCCACCGCCGGGGAAGTTCTCCATCCGCGGCAA
CATTGTTGGTTATTCAGACGCGGTGCGAGCGGCAGGAGGGGTGGGCAGGA
GGGAGCTGACTGCGGCGGTGAGCAACAGCGCGAACGGGACTATTCTCGAC
AACGGAAGCAACGGCGACGACGACCGTGCCGACACGGCTAGAAAGATCGA
GAGACAGGTGGTGCGAGCTATCGGAGTTGGGAGCTCTGCGGCCGCCAACG
GCAGCAGTGGGTCGTCAACAGGAACGGCTGCAGGCATGCTCGTCTCTGTT
TCTGGCGAAACACCTATTACCAACAACAACGACAACGACAACAACAACAA
CAACAACAACAATTCGTCATCATCCGCTGGGGAGCAGACCTCAGGAGGAG
GGAAAAGCACAGCAGGAAAGGGCAAGATCTTCCATGCACCGATTGCCACG
GCCGCCGCTACAGCTGGGGGAGGCACCACGAGGGCCAATGGGAAAGGCAA
GAACAAGACTCCCACGCCGCCTCCCGTGGAGCCAAGGTTATCTGTGGGGA
ACGGAGGTGTTGTGGGGATCATTTCAAAGACGTCAGGAGGAGCAGGAATT
GCCCAGCAGCAGCGAGGTCAGTCTTCAAGAACGGCACAGCAGACTGTTTA
TTCTCAATCGTCGTCGGTGAGGCAGAGAGTCGCAATGTCAATCGCAGCCA
AAGGCGATGGCAATAGCAGCAACAGCATAGCCAATAGTCGTCGCTCGTCG
GGCTCCCCCTCGCCTACGCTGCCGCCAGCGCTGATGATCCCAATCCCGAC
CCC back to topCoding sequence (CDS) from alignment at H-paniculata_contig5240:5535..6987+ >mRNA_H-paniculata_contig5240.12609.1 ID=mRNA_H-paniculata_contig5240.12609.1|Name=mRNA_H-paniculata_contig5240.12609.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2022bp|location=Sequence derived from alignment at H-paniculata_contig5240:5535..6987+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGGTGATAACGGGCTGGGGCAATCGGGCCGCCTCAAGCGCTCCCGGGA
AGACATGATCGACAAGGCTCCGGGCGGCACCAAACCTTCGAAGTCTCCGG
CTTCGAACCAACAAGATAAACTCGACCGGGACAACACATCCAATTTTGCG
CGGGGAGGGCAGCAGCTGCAGCAGCAGCAGTCGCGATCATCAGCTTTCTG
CTCGGCAGGACCTACCGCCACGGTGAGTGTGGTCAGCACAACGCGTCCCG
CACCACGTGCTCGGGCAGAATCGGACGATATGGACATAGATGAGGAAGGA
TTGGGGCCTGAGACCGAGGAGCAGCGCAGGCCTCCACCGCCGGGGAAGTT
CTCCATCCGCGGCAACATTGTTGGTTATTCAGACGCGGTGCGAGCGGCAG
GAGGGGTGGGCAGGAGGGAGCTGACTGCGGCGGTGAGCAACAGCGCGAAC
GGGACTATTCTCGACAACGGAAGCAACGGCGACGACGACCGTGCCGACAC
GGCTAGAAAGATCGAGAGACAGGTGGTGCGAGCTATCGGAGTTGGGAGCT
CTGCGGCCGCCAACGGCAGCAGTGGGTCGTCAACAGGAACGGCTGCAGGC
ATGCTCGTCTCTGTTTCTGGCGAAACACCTATTACCAACAACAACGACAA
CGACAACAACAACAACAAATGGGTGATAACGGGCTGGGGCAATCGGGCCG
CCTCAAGCGCTCCCGGGAAGACATGATCGACAAGGCTCCGGGCGGCACCA
AACCTTCGAAGTCTCCGGCTTCGAACCAACAAGATAAACTCGACCGGGAC
AACACATCCAATTTTGCGCGGGGAGGGCAGCAGCTGCAGCAGCAGCAGTC
GCGATCATCAGCTTTCTGCTCGGCAGGACCTACCGCCACGGTGAGTGTGG
TCAGCACAACGCGTCCCGCACCACGTGCTCGGGCAGAATCGGACGATATG
GACATAGATGAGGAAGGATTGGGGCCTGAGACCGAGGAGCAGCGCAGGCC
TCCACCGCCGGGGAAGTTCTCCATCCGCGGCAACATTGTTGGTTATTCAG
ACGCGGTGCGAGCGGCAGGAGGGGTGGGCAGGAGGGAGCTGACTGCGGCG
GTGAGCAACAGCGCGAACGGGACTATTCTCGACAACGGAAGCAACGGCGA
CGACGACCGTGCCGACACGGCTAGAAAGATCGAGAGACAGGTGGTGCGAG
CTATCGGAGTTGGGAGCTCTGCGGCCGCCAACGGCAGCAGTGGGTCGTCA
ACAGGAACGGCTGCAGGCATGCTCGTCTCTGTTTCTGGCGAAACACCTAT
TACCAACAACAACGACAACGACAACAACAACAACAACCGCTGGGGAGCAG
ACCTCAGGAGGAGGGAAAAGCACAGCAGGAAAGGGCAAGATCTTCCATGC
ACCGATTGCCACGGCCGCCGCTACAGCTGGGGGAGGCACCACGAGGGCCA
ATGGGAAAGGCAAGAACAAGACTCCCACGCCGCCTCCCGTGGAGCCAAGG
TTATCTGTGGGGAACGGAGGTGTTGTGGGGATCATTTCAAAGACGTCAGG
AGGAGCAGGAATTGCCCAGCAGCAGCGAGGTCAGTCTTCAAGAACGGCAC
AGCAGACTGTTTATTCTCAATCGTCGTCGGTGAGGCAGAGAGTCGCAATG
TCAATCGCAGCCAAAGGCGATGGCAATAGCCGCTGGGGAGCAGACCTCAG
GAGGAGGGAAAAGCACAGCAGGAAAGGGCAAGATCTTCCATGCACCGATT
GCCACGGCCGCCGCTACAGCTGGGGGAGGCACCACGAGGGCCAATGGGAA
AGGCAAGAACAAGACTCCCACGCCGCCTCCCGTGGAGCCAAGGTTATCTG
TGGGGAACGGAGGTGTTGTGGGGATCATTTCAAAGACGTCAGGAGGAGCA
GGAATTGCCCAGCAGCAGCGAGGTCAGTCTTCAAGAACGGCACAGCAGAC
TGTTTATTCTCAATCGTCGTCGGTGAGGCAGAGAGTCGCAATGTCAATCG
CAGCCAAAGGCGATGGCAATAG back to top
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