prot_H-paniculata_contig5239.12603.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-paniculata_contig5239.12603.1
Unique Name	prot_H-paniculata_contig5239.12603.1
Type	polypeptide
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length	113

Homology

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BLAST of mRNA_H-paniculata_contig5239.12603.1 vs. uniprot
Match: D7G4B1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G4B1_ECTSI)

HSP 1 Score: 233 bits (595), Expect = 1.710e-77
Identity = 108/112 (96.43%), Postives = 111/112 (99.11%), Query Frame = 0

Query:    1 MSYLLPHLRTGWAVDQAILNEEERVVCLRFGHDHDVTCMQMDEVLAGVAETVKNFCAIYVVDVSEVPDFNDMYELYDPCTVMFFFRNKHIMIDLGTGNNNKISWAFNNKQEV 112
            MSYLLPHLRTGWAVDQAI+NEEERVVCLRFGHDHDVTCMQMDEVLAG+AE VKNFCAIYVVDVSEVPDFNDMYELYDPCTVMFFFRNKHIMIDLGTGNNNKISWAFNNKQE+
Sbjct:    1 MSYLLPHLRTGWAVDQAIINEEERVVCLRFGHDHDVTCMQMDEVLAGIAEDVKNFCAIYVVDVSEVPDFNDMYELYDPCTVMFFFRNKHIMIDLGTGNNNKISWAFNNKQEM 112

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BLAST of mRNA_H-paniculata_contig5239.12603.1 vs. uniprot
Match: H3G9C0_PHYRM (Uncharacterized protein n=32 Tax=Oomycota TaxID=4762 RepID=H3G9C0_PHYRM)

HSP 1 Score: 207 bits (528), Expect = 2.810e-67
Identity = 95/112 (84.82%), Postives = 103/112 (91.96%), Query Frame = 0

Query:    1 MSYLLPHLRTGWAVDQAILNEEERVVCLRFGHDHDVTCMQMDEVLAGVAETVKNFCAIYVVDVSEVPDFNDMYELYDPCTVMFFFRNKHIMIDLGTGNNNKISWAFNNKQEV 112
            MSYLLPHL +GWAVDQAILNE +RVV +RFGHDHD TCMQMDEVL GVAE VKNF AIYVVD++EVPDFN MYELYDPCTVMFFFRNKH+MIDLGTGNNNKI+WAFNNK E+
Sbjct:    1 MSYLLPHLESGWAVDQAILNEGDRVVVIRFGHDHDSTCMQMDEVLCGVAEDVKNFAAIYVVDITEVPDFNTMYELYDPCTVMFFFRNKHVMIDLGTGNNNKINWAFNNKSEM 112

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BLAST of mRNA_H-paniculata_contig5239.12603.1 vs. uniprot
Match: A0A7S3HQX3_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HQX3_9STRA)

HSP 1 Score: 205 bits (521), Expect = 5.020e-66
Identity = 92/112 (82.14%), Postives = 104/112 (92.86%), Query Frame = 0

Query:    1 MSYLLPHLRTGWAVDQAILNEEERVVCLRFGHDHDVTCMQMDEVLAGVAETVKNFCAIYVVDVSEVPDFNDMYELYDPCTVMFFFRNKHIMIDLGTGNNNKISWAFNNKQEV 112
            MSYLLPHLR+GWAVDQAILNEE +VV +RFGHD D TCM+MDE+L G+A+ VKNFC+IY+VD+SEVPDF  MYELYDPCTVMFFFRNKHIMIDLGTGNNNKI+WAFNNKQE+
Sbjct:   14 MSYLLPHLRSGWAVDQAILNEESKVVLIRFGHDWDTTCMEMDEILFGIADDVKNFCSIYLVDLSEVPDFTTMYELYDPCTVMFFFRNKHIMIDLGTGNNNKINWAFNNKQEM 125

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BLAST of mRNA_H-paniculata_contig5239.12603.1 vs. uniprot
Match: A0A835Z237_9STRA (Mitosis protein DIM1-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z237_9STRA)

HSP 1 Score: 204 bits (519), Expect = 6.620e-66
Identity = 93/112 (83.04%), Postives = 103/112 (91.96%), Query Frame = 0

Query:    1 MSYLLPHLRTGWAVDQAILNEEERVVCLRFGHDHDVTCMQMDEVLAGVAETVKNFCAIYVVDVSEVPDFNDMYELYDPCTVMFFFRNKHIMIDLGTGNNNKISWAFNNKQEV 112
            M+YLL HL +GWAVDQAIL EEER V +RFGHD+D TCMQMDEVL+G+AE VKNF  IYVVD+S+VPDFNDMYELYDPCTVMFFFRNKHIMIDLGTGNNNKI+WAFNNKQE+
Sbjct:    1 MAYLLAHLTSGWAVDQAILKEEERAVVIRFGHDYDPTCMQMDEVLSGIAEDVKNFAVIYVVDISQVPDFNDMYELYDPCTVMFFFRNKHIMIDLGTGNNNKINWAFNNKQEM 112

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BLAST of mRNA_H-paniculata_contig5239.12603.1 vs. uniprot
Match: A0A7S2HED9_9STRA (Hypothetical protein n=3 Tax=Dictyochophyceae TaxID=39119 RepID=A0A7S2HED9_9STRA)

HSP 1 Score: 202 bits (514), Expect = 3.960e-65
Identity = 91/112 (81.25%), Postives = 102/112 (91.07%), Query Frame = 0

Query:    1 MSYLLPHLRTGWAVDQAILNEEERVVCLRFGHDHDVTCMQMDEVLAGVAETVKNFCAIYVVDVSEVPDFNDMYELYDPCTVMFFFRNKHIMIDLGTGNNNKISWAFNNKQEV 112
            MSYLLPHL+TGW+VDQAILNEE+RVV  RFGHD+D  CMQMDEVL G+ + VKNF  IYV+D+SEVPDFN MYELYDPCTVMFFFRNKHIMIDLGTGNNNKI+WAFN+KQE+
Sbjct:    2 MSYLLPHLQTGWSVDQAILNEEDRVVVCRFGHDYDPVCMQMDEVLCGIVDDVKNFAVIYVIDISEVPDFNTMYELYDPCTVMFFFRNKHIMIDLGTGNNNKINWAFNSKQEM 113

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BLAST of mRNA_H-paniculata_contig5239.12603.1 vs. uniprot
Match: A0A5D6XYK2_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XYK2_9STRA)

HSP 1 Score: 204 bits (520), Expect = 7.480e-65
Identity = 93/112 (83.04%), Postives = 103/112 (91.96%), Query Frame = 0

Query:    1 MSYLLPHLRTGWAVDQAILNEEERVVCLRFGHDHDVTCMQMDEVLAGVAETVKNFCAIYVVDVSEVPDFNDMYELYDPCTVMFFFRNKHIMIDLGTGNNNKISWAFNNKQEV 112
            MSYLLPHL +GWAVDQAILNE +RVV +RFGHDHD TCMQMDEVL+GVAE VKNF  +YVVD+++VPDFN MYELYDPCTVMFFFRNKHIMIDLGTGNNNKI+WAFNNK E+
Sbjct:   87 MSYLLPHLESGWAVDQAILNEGDRVVVIRFGHDHDPTCMQMDEVLSGVAEDVKNFAVVYVVDITQVPDFNTMYELYDPCTVMFFFRNKHIMIDLGTGNNNKINWAFNNKLEM 198

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BLAST of mRNA_H-paniculata_contig5239.12603.1 vs. uniprot
Match: A0A812WHX6_SYMMI (YLS8 protein n=3 Tax=Sar TaxID=2698737 RepID=A0A812WHX6_SYMMI)

HSP 1 Score: 201 bits (510), Expect = 1.560e-64
Identity = 90/112 (80.36%), Postives = 101/112 (90.18%), Query Frame = 0

Query:    1 MSYLLPHLRTGWAVDQAILNEEERVVCLRFGHDHDVTCMQMDEVLAGVAETVKNFCAIYVVDVSEVPDFNDMYELYDPCTVMFFFRNKHIMIDLGTGNNNKISWAFNNKQEV 112
            MSYLLPHL +GWAVDQAILNEE+RVV +RFGHD D TCMQMDE+L  +A+ VKNF  IY VD++EVPDFN MYELYDPCTVMFF+RNKHIMIDLGTGNNNKI+WAFNNKQE+
Sbjct:    1 MSYLLPHLNSGWAVDQAILNEEDRVVVIRFGHDWDTTCMQMDEILCNIADDVKNFAVIYCVDITEVPDFNTMYELYDPCTVMFFYRNKHIMIDLGTGNNNKINWAFNNKQEM 112

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BLAST of mRNA_H-paniculata_contig5239.12603.1 vs. uniprot
Match: A0A0M0JAP0_9EUKA (Thioredoxin-like protein 4a n=2 Tax=Prymnesiales TaxID=73028 RepID=A0A0M0JAP0_9EUKA)

HSP 1 Score: 199 bits (505), Expect = 9.010e-64
Identity = 91/112 (81.25%), Postives = 102/112 (91.07%), Query Frame = 0

Query:    1 MSYLLPHLRTGWAVDQAILNEEERVVCLRFGHDHDVTCMQMDEVLAGVAETVKNFCAIYVVDVSEVPDFNDMYELYDPCTVMFFFRNKHIMIDLGTGNNNKISWAFNNKQEV 112
            MSYL+PHL TGWAVDQAIL+EE+RVV LRFGHD+D TCMQMDEVL G+AE VKN+  IY+VD+SEVPDFN MYELYDPCTVMFFFRNKHIMIDLGTGNNNKI+WA  +KQE+
Sbjct:    1 MSYLMPHLNTGWAVDQAILSEEDRVVVLRFGHDYDPTCMQMDEVLYGIAELVKNYAVIYLVDISEVPDFNTMYELYDPCTVMFFFRNKHIMIDLGTGNNNKINWAIPDKQEM 112

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BLAST of mRNA_H-paniculata_contig5239.12603.1 vs. uniprot
Match: A0A1S3TIP0_VIGRR (thioredoxin-like protein YLS8 n=21 Tax=Pentapetalae TaxID=1437201 RepID=A0A1S3TIP0_VIGRR)

HSP 1 Score: 197 bits (501), Expect = 3.670e-63
Identity = 92/111 (82.88%), Postives = 99/111 (89.19%), Query Frame = 0

Query:    1 MSYLLPHLRTGWAVDQAILNEEERVVCLRFGHDHDVTCMQMDEVLAGVAETVKNFCAIYVVDVSEVPDFNDMYELYDPCTVMFFFRNKHIMIDLGTGNNNKISWAFNNKQE 111
            MSYLLPHL +GWAVDQ IL+EEERVV +RFGHD D TCMQMDEVLA VAE +KNF  IYVVD+SEVPDFN MYELYDPCTVMFFFRNKHIMIDLGTGNNNKI+WA  +KQE
Sbjct:    1 MSYLLPHLHSGWAVDQCILSEEERVVVIRFGHDWDDTCMQMDEVLASVAEKIKNFAVIYVVDISEVPDFNTMYELYDPCTVMFFFRNKHIMIDLGTGNNNKINWALKDKQE 111

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BLAST of mRNA_H-paniculata_contig5239.12603.1 vs. uniprot
Match: A0A7S3SL24_9SPIT (Hypothetical protein (Fragment) n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3SL24_9SPIT)

HSP 1 Score: 198 bits (503), Expect = 7.090e-63
Identity = 88/112 (78.57%), Postives = 102/112 (91.07%), Query Frame = 0

Query:    1 MSYLLPHLRTGWAVDQAILNEEERVVCLRFGHDHDVTCMQMDEVLAGVAETVKNFCAIYVVDVSEVPDFNDMYELYDPCTVMFFFRNKHIMIDLGTGNNNKISWAFNNKQEV 112
            MSYLLPHL +GWAVDQAI++EE RVVC+RFGHD+D  CMQMDEVL  +AE VKN+C IY+VD++EVPDFN MYELYDPCTVMFF+RNKHIMIDLGTGNNNKI+WA ++KQEV
Sbjct:   42 MSYLLPHLNSGWAVDQAIISEEARVVCIRFGHDYDPICMQMDEVLYSIAELVKNYCVIYLVDITEVPDFNTMYELYDPCTVMFFYRNKHIMIDLGTGNNNKINWAIHDKQEV 153

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig5239.12603.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig5239.12603.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7G4B1_ECTSI	1.710e-77	96.43	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]
H3G9C0_PHYRM	2.810e-67	84.82	Uncharacterized protein n=32 Tax=Oomycota TaxID=47...	[more]
A0A7S3HQX3_9STRA	5.020e-66	82.14	Hypothetical protein n=1 Tax=Spumella elongata Tax...	[more]
A0A835Z237_9STRA	6.620e-66	83.04	Mitosis protein DIM1-domain-containing protein n=1...	[more]
A0A7S2HED9_9STRA	3.960e-65	81.25	Hypothetical protein n=3 Tax=Dictyochophyceae TaxI...	[more]
A0A5D6XYK2_9STRA	7.480e-65	83.04	Uncharacterized protein n=1 Tax=Pythium brassicum ...	[more]
A0A812WHX6_SYMMI	1.560e-64	80.36	YLS8 protein n=3 Tax=Sar TaxID=2698737 RepID=A0A81...	[more]
A0A0M0JAP0_9EUKA	9.010e-64	81.25	Thioredoxin-like protein 4a n=2 Tax=Prymnesiales T...	[more]
A0A1S3TIP0_VIGRR	3.670e-63	82.88	thioredoxin-like protein YLS8 n=21 Tax=Pentapetala...	[more]
A0A7S3SL24_9SPIT	7.090e-63	78.57	Hypothetical protein (Fragment) n=1 Tax=Strombidin...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004123	Dim1 family	SMART	SM01410	DIM1_2	coord: 4..112 e-value: 1.3E-61 score: 220.7
IPR004123	Dim1 family	PIRSF	PIRSF017199	Dim1	coord: 1..112 e-value: 2.2E-57 score: 190.5
IPR004123	Dim1 family	PFAM	PF02966	DIM1	coord: 4..111 e-value: 4.4E-51 score: 172.1
IPR004123	Dim1 family	PANTHER	PTHR12052	THIOREDOXIN-LIKE PROTEN 4A, 4B	coord: 1..111
None	No IPR available	GENE3D	3.40.30.10		coord: 1..112 e-value: 1.8E-56 score: 191.6
None	No IPR available	PANTHER	PTHR12052:SF9		coord: 1..111
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 4..111

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig5239	contig	H-paniculata_contig5239:3019..6437 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig5239.12603.1	mRNA_H-paniculata_contig5239.12603.1	Halopteris paniculata Hal_grac_a_UBK monoicous	mRNA	H-paniculata_contig5239 2663..6552 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-paniculata_contig5239.12603.1 ID=prot_H-paniculata_contig5239.12603.1|Name=mRNA_H-paniculata_contig5239.12603.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=113bp
MSYLLPHLRTGWAVDQAILNEEERVVCLRFGHDHDVTCMQMDEVLAGVAE
TVKNFCAIYVVDVSEVPDFNDMYELYDPCTVMFFFRNKHIMIDLGTGNNN
KISWAFNNKQEV*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR004123	Dim1
IPR036249	Thioredoxin-like_sf