mRNA_H-paniculata_contig52281.12595.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig52281.12595.1 vs. uniprot
Match: D7FKR6_ECTSI (Sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKR6_ECTSI) HSP 1 Score: 85.5 bits (210), Expect = 1.730e-18 Identity = 36/49 (73.47%), Postives = 45/49 (91.84%), Query Frame = 1
Query: 1 VKMLTIHRWFDISAAERDLKYKPLLTFEEGWANTLEWLQENWLPKYEAK 147
VKML IHRWFDISAAERDLKYKP++TFEEG++ T+ WL+E+WLP ++AK
Sbjct: 298 VKMLIIHRWFDISAAERDLKYKPIVTFEEGFSKTIAWLKEDWLPTFKAK 346
BLAST of mRNA_H-paniculata_contig52281.12595.1 vs. uniprot
Match: A0A7S2Z2X8_9CHLO (Hypothetical protein n=1 Tax=Chloropicon laureae TaxID=464258 RepID=A0A7S2Z2X8_9CHLO) HSP 1 Score: 85.5 bits (210), Expect = 1.920e-18 Identity = 34/49 (69.39%), Postives = 44/49 (89.80%), Query Frame = 1
Query: 1 VKMLTIHRWFDISAAERDLKYKPLLTFEEGWANTLEWLQENWLPKYEAK 147
V+ML IHRWFDI+AAERDLKY+PLL+FEEGW +TLEW + NW+PK++ +
Sbjct: 306 VRMLMIHRWFDITAAERDLKYEPLLSFEEGWRDTLEWFKHNWMPKFDPE 354
BLAST of mRNA_H-paniculata_contig52281.12595.1 vs. uniprot
Match: A0A7S0RG05_9CHLO (Hypothetical protein n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0RG05_9CHLO) HSP 1 Score: 84.7 bits (208), Expect = 3.390e-18 Identity = 35/50 (70.00%), Postives = 44/50 (88.00%), Query Frame = 1
Query: 1 VKMLTIHRWFDISAAERDLKYKPLLTFEEGWANTLEWLQENWLPKYEAKK 150
VKMLTIHRWF+I+AA+RDL Y+PL +F+EGWA+T+EW QE+WLP Y A K
Sbjct: 299 VKMLTIHRWFNITAAKRDLGYEPLFSFQEGWASTIEWFQEHWLPDYRAGK 348
BLAST of mRNA_H-paniculata_contig52281.12595.1 vs. uniprot
Match: A0A7S3GUI0_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GUI0_9STRA) HSP 1 Score: 83.6 bits (205), Expect = 1.110e-17 Identity = 35/48 (72.92%), Postives = 43/48 (89.58%), Query Frame = 1
Query: 1 VKMLTIHRWFDISAAERDLKYKPLLTFEEGWANTLEWLQENWLPKYEA 144
VKML I+R+FDISAAERDLKYKP++ FE+GWA T+EW +ENWLP Y+A
Sbjct: 329 VKMLVINRYFDISAAERDLKYKPVIPFEQGWAQTIEWFKENWLPTYKA 376
BLAST of mRNA_H-paniculata_contig52281.12595.1 vs. uniprot
Match: A0A7S2G9R4_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G9R4_9STRA) HSP 1 Score: 78.6 bits (192), Expect = 9.450e-17 Identity = 34/51 (66.67%), Postives = 43/51 (84.31%), Query Frame = 1
Query: 1 VKMLTIHRWFDISAAERDLKYKPLLTFEEGWANTLEWLQENWLPKY-EAKK 150
VK+LT+HRWFDISAAE+DLKY P++ F+EGW T EW + NWLPK+ EA+K
Sbjct: 117 VKVLTMHRWFDISAAEKDLKYLPVIPFDEGWKQTGEWFKANWLPKFNEAQK 167
BLAST of mRNA_H-paniculata_contig52281.12595.1 vs. uniprot
Match: A0A5B8MXM1_9CHLO (Hypothetical protein n=1 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8MXM1_9CHLO) HSP 1 Score: 80.5 bits (197), Expect = 1.210e-16 Identity = 32/47 (68.09%), Postives = 41/47 (87.23%), Query Frame = 1
Query: 1 VKMLTIHRWFDISAAERDLKYKPLLTFEEGWANTLEWLQENWLPKYE 141
V+ML IHRWFDISAAERDLKY P+L+FE+GW +TL W ++NW+P Y+
Sbjct: 298 VRMLMIHRWFDISAAERDLKYAPVLSFEDGWKDTLAWFKQNWMPLYD 344
BLAST of mRNA_H-paniculata_contig52281.12595.1 vs. uniprot
Match: A0A7S2SV77_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SV77_9STRA) HSP 1 Score: 80.5 bits (197), Expect = 1.690e-16 Identity = 30/50 (60.00%), Postives = 44/50 (88.00%), Query Frame = 1
Query: 1 VKMLTIHRWFDISAAERDLKYKPLLTFEEGWANTLEWLQENWLPKYEAKK 150
V++LT+HRWFDISAAE DLKYKP++++++GWA T+ W +ENWLP +++ K
Sbjct: 329 VRVLTMHRWFDISAAENDLKYKPVISYKQGWAETIAWFKENWLPDFQSGK 378
BLAST of mRNA_H-paniculata_contig52281.12595.1 vs. uniprot
Match: A0A7S3Y444_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y444_HETAK) HSP 1 Score: 78.2 bits (191), Expect = 8.660e-16 Identity = 31/45 (68.89%), Postives = 39/45 (86.67%), Query Frame = 1
Query: 1 VKMLTIHRWFDISAAERDLKYKPLLTFEEGWANTLEWLQENWLPK 135
VKMLTIHRWF+I AA +DL Y+P++TFE GWA+T+ W +ENWLPK
Sbjct: 303 VKMLTIHRWFNIEAARQDLGYEPIVTFENGWADTMHWFRENWLPK 347
BLAST of mRNA_H-paniculata_contig52281.12595.1 vs. uniprot
Match: A0A482T2Y5_9ARCH (NAD-dependent epimerase/dehydratase family protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482T2Y5_9ARCH) HSP 1 Score: 77.0 bits (188), Expect = 1.220e-15 Identity = 32/49 (65.31%), Postives = 41/49 (83.67%), Query Frame = 1
Query: 1 VKMLTIHRWFDISAAERDLKYKPLLTFEEGWANTLEWLQENWLPKYEAK 147
V+ML I R+F+I+ A+RDLKY+PLLTFEEGWA T+ W ++NWLPKY K
Sbjct: 230 VRMLVIDRYFNIANAKRDLKYEPLLTFEEGWAQTVSWFKQNWLPKYNKK 278
BLAST of mRNA_H-paniculata_contig52281.12595.1 vs. uniprot
Match: A0A7S2FWZ1_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2FWZ1_9EUKA) HSP 1 Score: 73.6 bits (179), Expect = 1.370e-15 Identity = 28/49 (57.14%), Postives = 40/49 (81.63%), Query Frame = 1
Query: 1 VKMLTIHRWFDISAAERDLKYKPLLTFEEGWANTLEWLQENWLPKYEAK 147
VKMLT+HRWF+I+AAE+DL YKP++ + EGW +TLEW +WLP ++ +
Sbjct: 48 VKMLTMHRWFNIAAAEKDLGYKPIVNYGEGWRDTLEWFAAHWLPSFDRR 96 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig52281.12595.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig52281.12595.1 >prot_H-paniculata_contig52281.12595.1 ID=prot_H-paniculata_contig52281.12595.1|Name=mRNA_H-paniculata_contig52281.12595.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=49bp MLTIHRWFDISAAERDLKYKPLLTFEEGWANTLEWLQENWLPKYEAKK*back to top mRNA from alignment at H-paniculata_contig52281:202..354+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig52281.12595.1 ID=mRNA_H-paniculata_contig52281.12595.1|Name=mRNA_H-paniculata_contig52281.12595.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=153bp|location=Sequence derived from alignment at H-paniculata_contig52281:202..354+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig52281:202..354+ >mRNA_H-paniculata_contig52281.12595.1 ID=mRNA_H-paniculata_contig52281.12595.1|Name=mRNA_H-paniculata_contig52281.12595.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=294bp|location=Sequence derived from alignment at H-paniculata_contig52281:202..354+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |