prot_H-paniculata_contig52260.12594.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig52260.12594.1
Unique Nameprot_H-paniculata_contig52260.12594.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length76
Homology
BLAST of mRNA_H-paniculata_contig52260.12594.1 vs. uniprot
Match: A0A6H5K892_9PHAE (APG6 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K892_9PHAE)

HSP 1 Score: 91.7 bits (226), Expect = 6.970e-20
Identity = 43/73 (58.90%), Postives = 56/73 (76.71%), Query Frame = 0
Query:    1 EAALDLSNRSALSDLFAISHVKGFPSINGYRLGRAPDERQQLHWNEINASWGQVRTVLTWCVSPELGVWSLKY 73
            E A  LS RSALS+LF+I HV GFPSING+RLGRAPD++++LHWNEINA+WG+   +L  CVS  +   S ++
Sbjct:  492 ENAAHLSERSALSELFSIRHVDGFPSINGFRLGRAPDDKRRLHWNEINAAWGEA-VLLVRCVSNAVDFRSKRF 563          
BLAST of mRNA_H-paniculata_contig52260.12594.1 vs. uniprot
Match: A0A397H515_9GLOM (Uncharacterized protein n=1 Tax=Diversispora epigaea TaxID=1348612 RepID=A0A397H515_9GLOM)

HSP 1 Score: 52.0 bits (123), Expect = 6.230e-6
Identity = 24/53 (45.28%), Postives = 33/53 (62.26%), Query Frame = 0
Query:    6 LSNRSALSDLFAISHVKGFPSINGYRLGRAPDERQQLHWNEINASWGQVRTVL 58
            L   +  +D F I H   F +ING+RLGR P+  Q + W+EINA+WGQ   +L
Sbjct:  305 LQKTNVYNDTFCIGHDGHFGTINGFRLGRLPN--QMVDWSEINAAWGQTLLLL 355          
BLAST of mRNA_H-paniculata_contig52260.12594.1 vs. uniprot
Match: A0A1Y1ZB23_9FUNG (APG6-domain-containing protein n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1ZB23_9FUNG)

HSP 1 Score: 50.8 bits (120), Expect = 1.590e-5
Identity = 24/53 (45.28%), Postives = 33/53 (62.26%), Query Frame = 0
Query:    6 LSNRSALSDLFAISHVKGFPSINGYRLGRAPDERQQLHWNEINASWGQVRTVL 58
            L   +  +D F I H   F +ING+RLGR P+  Q + W+EINA+WGQ   +L
Sbjct:  274 LQKTNVYNDTFNIGHDGHFGTINGFRLGRLPN--QAVEWSEINAAWGQTVLLL 324          
BLAST of mRNA_H-paniculata_contig52260.12594.1 vs. uniprot
Match: A0A813FZN8_POLGL (Hypothetical protein (Fragment) n=3 Tax=Polarella glacialis TaxID=89957 RepID=A0A813FZN8_POLGL)

HSP 1 Score: 50.4 bits (119), Expect = 2.020e-5
Identity = 24/53 (45.28%), Postives = 34/53 (64.15%), Query Frame = 0
Query:    6 LSNRSALSDLFAISHVKGFPSINGYRLGRAPDERQQLHWNEINASWGQVRTVL 58
            L   S L+++F IS    F +ING+RLGR P+  Q + W E+NA+WGQ   +L
Sbjct:  146 LRRSSVLNEMFHISQEGPFGTINGFRLGRLPE--QLVPWEEVNAAWGQACLLL 196          
BLAST of mRNA_H-paniculata_contig52260.12594.1 vs. uniprot
Match: A0A812RCQ5_9DINO (Atg6 protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812RCQ5_9DINO)

HSP 1 Score: 48.5 bits (114), Expect = 9.230e-5
Identity = 22/53 (41.51%), Postives = 34/53 (64.15%), Query Frame = 0
Query:    6 LSNRSALSDLFAISHVKGFPSINGYRLGRAPDERQQLHWNEINASWGQVRTVL 58
            L   + L+++F IS    F +ING+R+GR P+  Q + W E+NA+WGQ   +L
Sbjct:   78 LRKTNVLNEMFHISQDGPFGTINGFRMGRLPE--QPVPWEEVNAAWGQACLLL 128          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig52260.12594.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5K892_9PHAE6.970e-2058.90APG6 domain-containing protein n=2 Tax=Ectocarpus ... [more]
A0A397H515_9GLOM6.230e-645.28Uncharacterized protein n=1 Tax=Diversispora epiga... [more]
A0A1Y1ZB23_9FUNG1.590e-545.28APG6-domain-containing protein n=1 Tax=Basidiobolu... [more]
A0A813FZN8_POLGL2.020e-545.28Hypothetical protein (Fragment) n=3 Tax=Polarella ... [more]
A0A812RCQ5_9DINO9.230e-541.51Atg6 protein n=1 Tax=Symbiodinium natans TaxID=878... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR038274Atg6/Beclin C-terminal domain superfamilyGENE3D1.10.418.40coord: 2..73
e-value: 7.9E-14
score: 53.6
IPR040455Atg6, BARA domainPFAMPF04111APG6coord: 8..59
e-value: 3.4E-12
score: 46.7

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig52260contigH-paniculata_contig52260:730..957 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig52260.12594.1mRNA_H-paniculata_contig52260.12594.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig52260 730..957 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig52260.12594.1 ID=prot_H-paniculata_contig52260.12594.1|Name=mRNA_H-paniculata_contig52260.12594.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=76bp
EAALDLSNRSALSDLFAISHVKGFPSINGYRLGRAPDERQQLHWNEINAS
WGQVRTVLTWCVSPELGVWSLKYVP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR038274Atg6/Beclin_C_sf
IPR040455Atg6_BARA