prot_H-paniculata_contig5225.12591.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig5225.12591.1
Unique Nameprot_H-paniculata_contig5225.12591.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length434
Homology
BLAST of mRNA_H-paniculata_contig5225.12591.1 vs. uniprot
Match: D7FWY0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWY0_ECTSI)

HSP 1 Score: 289 bits (739), Expect = 1.300e-90
Identity = 159/356 (44.66%), Postives = 219/356 (61.52%), Query Frame = 0
Query:   93 FLELAQARFLERVGRPSTKADENWSFNHIQLIRVPKAASTAASAVARTLVGCSPPGPCCVWGEVPVGSCPARGLDCSHKVTGCWGHRMGPERKGTMQNSKVFSMSSVRDVTARLVSGFFYAAPHSPECARNKNVDYTACFRHMVERPMYQNVAARMFAGYYAYDHRQNICLKSGQ------RCSATLDAVIASACDLNFIMVSEAWKSSILLLFETLPWIAPSKAYLPV----------TGKSQGGADVG--RRNTERRYEEGLGNVTTPELMDLAKTRNAVDVQLHEFITAMFCNRLRVLGLINHSLVVEELVAFKSLGGMCYDESNTQATLARFRPFKTTNGEKCRLFQPLARE 430
            FLELA+ RF  R  R +T   + ++F+ +QL+RVPKA S+ AS +AR L GC P GPCC+    P GSCP+ GL C   V GC  H M P+R   +++  VFSMS+VRDV  R+VSGF Y  PHSP C R  +VDY +CF  M+    +QNVAARM +G+ AY+    +C+   Q       C+  L++VI  AC+LNF+ + EAW SS+LLLFETL W+ P+  + P           +  ++ GA  G  R NT  ++EEG+ ++T PEL D A++ NAVD  LHEF++A FC RLR  GL++H LV  EL  ++ L   C DE+  + TL RF P      ++CRL+QP  ++
Sbjct:   49 FLELARERFEARNVRSATLEGDTFAFDRLQLVRVPKAGSSEASVIARRLGGCVPRGPCCMMPGHPPGSCPSEGLMCP-AVLGCTAHMMDPKRNTMLEDPSVFSMSNVRDVVDRMVSGFLYTQPHSPLCTRTDDVDYESCFEEMMNTTKFQNVAARMVSGHDAYEGSVKLCMNKDQDVGGEAACAEDLESVIKGACNLNFVTMCEAWASSVLLLFETLRWLEPTADFFPAPRHRHRQLSSSEDAKEGAAAGPQRHNTGSKHEEGIKHIT-PELRDAARSANAVDEALHEFVSAKFCERLRETGLLHHPLVGAELATYEPLERRCNDETWAKDTLERFAPIMP---DECRLYQPFDKQ 399          
BLAST of mRNA_H-paniculata_contig5225.12591.1 vs. uniprot
Match: A0A6H5L244_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L244_9PHAE)

HSP 1 Score: 287 bits (734), Expect = 4.910e-90
Identity = 160/358 (44.69%), Postives = 216/358 (60.34%), Query Frame = 0
Query:   93 FLELAQARFLERVGRPSTKADENWSFNHIQLIRVPKAASTAASAVARTLVGCSPPGPCCVWGEVPVGSCPARGLDCSHKVTGCWGHRMGPERKGTMQNSKVFSMSSVRDVTARLVSGFFYAAPHSPECARNKNVDYTACFRHMVERPMYQNVAARMFAGYYAYDHRQNICLKSGQR------CSATLDAVIASACDLNFIMVSEAWKSSILLLFETLPWIAPSKAYLPVTGK------SQGGADV------------GRRNTERRYEEGLGNVTTPELMDLAKTRNAVDVQLHEFITAMFCNRLRVLGLINHSLVVEELVAFKSLGGMCYDESNTQATLARFRPFKTTNGEKCRLFQP 426
            FLELA+ RF  R GRP+T  +  ++F+ +QLIRVPKA S+ AS +AR L GC P GPCC +   P GSCP  GL C   VTGC  HRM P     +++  VFSM+++R V  R+VSGFFY  PHSP CA   +VDY ACF+ M+    +QN+AARM +G+ AY     +C+   Q       C   L++VI  AC+LNF+ + E W SS+LLLFETLPW+ P+  + P   +      S G AD              R+NT  ++EEG+ ++T PEL + A + NAVD  LHEFI+A FC RLR  GL++H LV  +L  ++ L   C DE+  + TL RF P      ++CRL++P
Sbjct:   30 FLELARERFEARNGRPATFEENAFAFDGLQLIRVPKAGSSEASVIARRLGGCVPRGPCCRFPGDPPGSCPLEGLMCP-MVTGCTSHRMDPTTTAMLEDPSVFSMANIRGVVDRMVSGFFYTDPHSPPCAWKDDVDYEACFQKMITTRKFQNIAARMVSGHDAYKGGIRLCMDKDQDEGGEGVCVEDLESVIRGACNLNFVTMCETWDSSVLLLFETLPWLGPTADFFPAPKRQHRQLPSIGDADAPAPLEVPAASGRSRQNTGAKHEEGIKHIT-PELREAASSANAVDEALHEFISAKFCERLRETGLLHHPLVSAQLATYEPLDHRCNDETWAKETLERFAPI---TPQECRLYEP 382          
BLAST of mRNA_H-paniculata_contig5225.12591.1 vs. uniprot
Match: A0A6H5KAL5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAL5_9PHAE)

HSP 1 Score: 269 bits (687), Expect = 1.920e-82
Identity = 150/334 (44.91%), Postives = 202/334 (60.48%), Query Frame = 0
Query:   93 FLELAQARFLERVGRPSTKADENWSFNHIQ-----LIRVPKAASTAASAVARTLVGCSPPGPCCVWGEVPVGSCPARGLDCSHKVTGCWGHRMGPERKGTMQNSKVFSMSSVRDVTARLVSGFFYAAPHSPECARNKNVDYTACFRHMVERPMYQNVAARMFAGYYAYDHRQNICLKSGQ------RCSATLDAVIASACDLNFIMVSEAWKSSILLLFETLPWIAPSKAYLPVTGKS--QGGADVGR--------------------RNTERRYEEGLGNVTTPELMDLAKTRNAVDVQLHEFITAMFCNRLRVLGLINHSLVVEELVAFKSL 393
            FLELA+ RF  R GRP+T  + N+S + +Q     L+ VPKA S+ AS VAR L GC P GPCC+    P GSCP+ GL C   V GC  H+M P+R   +++  VFSMS++RDV  R+VSGF Y  PHSP C R  +VDY +CF  M+    +QNVAARM +G+ AYD    +C+   Q       C+  L++V+  AC+LNF+ + EAW SS+LLLFETLPW+ P+  + P       Q G D+GR                    +NT  ++EEG+ ++T PEL D A++ NAVD  LHE ++A FC RLR  GL++H LVV EL  ++ L
Sbjct:   18 FLELARERFEARNGRPATFEESNFSLDRLQGLLRMLMLVPKAGSSEASVVARRLGGCVPRGPCCMMPGHPPGSCPSEGLMCP-AVLGCTAHKMDPKRNTMLEDPSVFSMSNIRDVVDRMVSGFLYTQPHSPLCTRTDDVDYESCFEEMMNTTKFQNVAARMVSGHDAYDSSIKLCMNKDQDVGGEAACAEDLESVMKGACNLNFVTMCEAWGSSVLLLFETLPWLEPTADFFPAPRHRHHQCGCDLGRVTPVYSSEDAKESAASGPQRQNTGAKHEEGMKHIT-PELRDAARSANAVDEALHELVSAKFCERLREAGLLHHPLVVAELATYEPL 349          
BLAST of mRNA_H-paniculata_contig5225.12591.1 vs. uniprot
Match: D7G3X3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3X3_ECTSI)

HSP 1 Score: 104 bits (259), Expect = 1.670e-23
Identity = 54/102 (52.94%), Postives = 64/102 (62.75%), Query Frame = 0
Query:  125 RVPKAASTAASAVARTLVGCSPPGPCCVWGEVPVGSCPARGLDCSHKVTGCWGHRMGPERKGTMQNSKVFSMSSVRDVTARLVSGFFYAAPHSPECARNKNV 226
            RVPKA S+ AS +AR L GC P GPCC +   P GSCP  GL C   VTGC GH M   R   +++  VFSM+++R V  R+VSGF Y   HSP CAR  NV
Sbjct:    4 RVPKAGSSEASVIARRLGGCVPRGPCCAFPGDPPGSCPLEGLMCP-MVTGCVGHNMNQRRTMMLEDPSVFSMTNIRGVVNRMVSGFLYTKSHSPPCARTDNV 104          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5225.12591.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7FWY0_ECTSI1.300e-9044.66Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L244_9PHAE4.910e-9044.69Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5KAL5_9PHAE1.920e-8244.91Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G3X3_ECTSI1.670e-2352.94Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 19..36
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..36
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 7..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..6
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 37..433
NoneNo IPR availableTMHMMTMhelixcoord: 7..29

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5225contigH-paniculata_contig5225:963..8607 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5225.12591.1mRNA_H-paniculata_contig5225.12591.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig5225 799..8860 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig5225.12591.1 ID=prot_H-paniculata_contig5225.12591.1|Name=mRNA_H-paniculata_contig5225.12591.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=434bp
MKLGGKLALLAPLIVVATLMGVVCFHHNLFTSIASRGDTTSKRDITDRPI
WGRGPEETVDRFEPDSPGQGIAVELQRDLVVTEEKAQGSMDRFLELAQAR
FLERVGRPSTKADENWSFNHIQLIRVPKAASTAASAVARTLVGCSPPGPC
CVWGEVPVGSCPARGLDCSHKVTGCWGHRMGPERKGTMQNSKVFSMSSVR
DVTARLVSGFFYAAPHSPECARNKNVDYTACFRHMVERPMYQNVAARMFA
GYYAYDHRQNICLKSGQRCSATLDAVIASACDLNFIMVSEAWKSSILLLF
ETLPWIAPSKAYLPVTGKSQGGADVGRRNTERRYEEGLGNVTTPELMDLA
KTRNAVDVQLHEFITAMFCNRLRVLGLINHSLVVEELVAFKSLGGMCYDE
SNTQATLARFRPFKTTNGEKCRLFQPLAREHFL*
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