prot_H-paniculata_contig5220.12587.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig5220.12587.1
Unique Nameprot_H-paniculata_contig5220.12587.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length191
Homology
BLAST of mRNA_H-paniculata_contig5220.12587.1 vs. uniprot
Match: A0A6H5KPK4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPK4_9PHAE)

HSP 1 Score: 133 bits (334), Expect = 2.790e-36
Identity = 69/125 (55.20%), Postives = 93/125 (74.40%), Query Frame = 0
Query:   65 RGLATEVDRMQHNIRVKEGMSISDPVKRVLAIENASRQQQKQLARQLAIEHWCRHTTDTGSPACQIATLTIRIDALRHHLATLHGKDKSTKRGYLALLNRRQRMLAYLKRTDFDTYRKIHQELGL 189
            RGLA+E  RM + I++ EG+ +SDPV+RVL+I+N++  Q+K+L ++L +E W RH  DTGSP CQIA LT+RIDALR  + +    D S KRGY+ LL RR++MLAYLKR DF+ YRK+  E GL
Sbjct:   37 RGLASE--RMVYGIKIPEGVKVSDPVRRVLSIDNSTMPQKKKLLKRLELEKWQRHAGDTGSPECQIAALTVRIDALRPLVNSTARMDFSCKRGYVKLLARRRKMLAYLKRKDFEIYRKVALETGL 159          
BLAST of mRNA_H-paniculata_contig5220.12587.1 vs. uniprot
Match: D8LI83_ECTSI (RpsO n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI83_ECTSI)

HSP 1 Score: 100 bits (248), Expect = 4.170e-24
Identity = 54/97 (55.67%), Postives = 69/97 (71.13%), Query Frame = 0
Query:   94 LAIENASRQ-QQKQLARQLAIEHWCRHTTDTGSPACQIATLTIRIDALRHHLATLHGKDKSTKRGYLALLNRRQRMLAYLKRTDFDTYRKIHQELGL 189
            +A  N SR+ Q+K+L ++L +E W RH  DTGSP CQIA LT+RIDALR  + +    D S KRGY+ LL RR++MLAYLKR DF+ YRK+  E GL
Sbjct:    1 MAQTNLSRKPQKKKLLKRLELEKWQRHAGDTGSPECQIAALTVRIDALRPLVNSTARMDFSCKRGYVKLLARRRKMLAYLKRKDFEIYRKVALETGL 97          
BLAST of mRNA_H-paniculata_contig5220.12587.1 vs. uniprot
Match: A0A7S2FKX4_9STRA (30S ribosomal protein S15 n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FKX4_9STRA)

HSP 1 Score: 84.7 bits (208), Expect = 1.190e-17
Identity = 47/116 (40.52%), Postives = 72/116 (62.07%), Query Frame = 0
Query:   74 MQHNIRVKEGMSISDPVKRVLAIENASRQQQKQLARQLAIEHWCRHTTDTGSPACQIATLTIRIDALRHHLATLHGKDKSTKRGYLALLNRRQRMLAYLKRTDFDTYRKIHQELGL 189
            ++  I+ +    +S+ V+RVL++ NAS  +  Q     AIE +     DTGS   Q+A LT++I+ +R HL   H KD  +KRG + L+N+R+++L YLKRTDFD+YR+    L L
Sbjct:   18 LRFGIKPETVPEVSEAVRRVLSMANASNAEVTQAKVARAIEAFASRPGDTGSTPVQVAVLTVKIENVRAHLKQ-HVKDNPSKRGLVMLVNKRRKLLKYLKRTDFDSYRRTVYSLNL 132          
BLAST of mRNA_H-paniculata_contig5220.12587.1 vs. uniprot
Match: A0A8J5XJJ3_DIALT (Uncharacterized protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XJJ3_DIALT)

HSP 1 Score: 84.3 bits (207), Expect = 5.050e-17
Identity = 46/98 (46.94%), Postives = 63/98 (64.29%), Query Frame = 0
Query:   86 ISDPVKRVLAIENASRQQQKQLARQLAIEHWCRHTTDTGSPACQIATLTIRIDALRHHLATLHGKDKSTKRGYLALLNRRQRMLAYLKRTDFDTYRKI 183
            + + V+R +++ENAS   + ++    AIEHW     DTGSPA QIATLT+RID L  HLA+ H KDK++KR    L+ +R R L YL   D + YRK+
Sbjct:   63 LGESVRRAVSLENASSSDRMKVELHRAIEHWQARPGDTGSPAVQIATLTVRIDYLTRHLAS-HHKDKASKRIMYKLVGQRNRTLKYLLSEDRNMYRKV 159          
BLAST of mRNA_H-paniculata_contig5220.12587.1 vs. uniprot
Match: A0A6G7PVF4_9BACT (30S ribosomal protein S15 n=1 Tax=Thermosulfuriphilus ammonigenes TaxID=1936021 RepID=A0A6G7PVF4_9BACT)

HSP 1 Score: 80.5 bits (197), Expect = 1.420e-16
Identity = 41/77 (53.25%), Postives = 54/77 (70.13%), Query Frame = 0
Query:  113 IEHWCRHTTDTGSPACQIATLTIRIDALRHHLATLHGKDKSTKRGYLALLNRRQRMLAYLKRTDFDTYRKIHQELGL 189
            IE +  H +DTGSP  QIA LT RI+ L  H   +H KD  ++RG L ++ +R+R+L YLKRTDFD YR+I +ELGL
Sbjct:   12 IERFKLHDSDTGSPEVQIALLTARINHLTEHFK-VHKKDHHSRRGLLKMVGQRRRLLQYLKRTDFDRYRRIVKELGL 87          
BLAST of mRNA_H-paniculata_contig5220.12587.1 vs. uniprot
Match: A0A2H5W8Q7_9BACT (30S ribosomal protein S15 n=1 Tax=bacterium HR11 TaxID=2035406 RepID=A0A2H5W8Q7_9BACT)

HSP 1 Score: 78.6 bits (192), Expect = 7.870e-16
Identity = 43/77 (55.84%), Postives = 52/77 (67.53%), Query Frame = 0
Query:  113 IEHWCRHTTDTGSPACQIATLTIRIDALRHHLATLHGKDKSTKRGYLALLNRRQRMLAYLKRTDFDTYRKIHQELGL 189
            IE + RH TDTGS    IA LT RI  L  HL   H KD S+KRG L L+ RR+R+LAYL+R DFD Y+++ Q LGL
Sbjct:   12 IEQFRRHETDTGSTEIVIALLTQRIQHLSEHLRR-HPKDFSSKRGLLRLVGRRRRLLAYLRRKDFDRYQQVIQALGL 87          
BLAST of mRNA_H-paniculata_contig5220.12587.1 vs. uniprot
Match: A0A7S2MPL4_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2MPL4_9STRA)

HSP 1 Score: 82.4 bits (202), Expect = 9.120e-16
Identity = 46/121 (38.02%), Postives = 78/121 (64.46%), Query Frame = 0
Query:   70 EVDRMQHNIRVK-EGMSISDPVKRVLAIENASRQQQKQLARQLAIEHWCRHTTDTGSPACQIATLTIRIDALRHHLATLHGKDKSTKRGYLALLNRRQRMLAYLKRTDFDTYRKIHQELGL 189
            +++  + ++R +  G+ +SD VK++  + N S+++  +  ++  +E +     DTGS A Q+  LT RI  L+ H+ T H KDKS+KRG  AL  RR+++L Y++R DFD+YRK+ + LGL
Sbjct:  126 KINTQKESLRFRFSGLEMSDRVKKLFDLTNGSQKEVVKAQKERGMELFQLREGDTGSSAVQVIALTTRIQQLQTHM-TKHKKDKSSKRGLDALYVRRRKVLDYMERKDFDSYRKVVKTLGL 245          
BLAST of mRNA_H-paniculata_contig5220.12587.1 vs. uniprot
Match: A0A1Z5JKK0_FISSO (Small subunit ribosomal protein S15 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JKK0_FISSO)

HSP 1 Score: 81.3 bits (199), Expect = 2.280e-15
Identity = 43/108 (39.81%), Postives = 74/108 (68.52%), Query Frame = 0
Query:   83 GMSISDPVKRVLAIENASRQQQKQLARQLAIEHWCRHTTDTGSPACQIATLTIRIDALRHHLATLHGKDKSTKRGYLALLNRRQRMLAYLKRTDFDTYRKIHQELGLS 190
            G+ +S+ V+++  ++NAS+ ++ +  +Q  ++ +     DTGS A QIA L+ RI  ++ H+ T H KDK +KRG  AL +RR++ML YL+R DF++YR++ + LGL+
Sbjct:  135 GIQMSERVQKLFDLQNASQMERIKSQKQKVMQIFQYRPGDTGSSAVQIAALSTRIQQMQAHM-TKHKKDKHSKRGMEALFSRRRKMLDYLERKDFESYRRVVKALGLA 241          
BLAST of mRNA_H-paniculata_contig5220.12587.1 vs. uniprot
Match: M2XCM9_9MICC (30S ribosomal protein S15 n=4 Tax=Kocuria palustris TaxID=71999 RepID=M2XCM9_9MICC)

HSP 1 Score: 76.6 bits (187), Expect = 4.360e-15
Identity = 39/81 (48.15%), Postives = 51/81 (62.96%), Query Frame = 0
Query:  109 RQLAIEHWCRHTTDTGSPACQIATLTIRIDALRHHLATLHGKDKSTKRGYLALLNRRQRMLAYLKRTDFDTYRKIHQELGL 189
            +Q  IE +  H  DTGSP  Q+A LT RI  L  HL + H  D  T+RG +A++ RR+RML YL+ TD + YR + Q LGL
Sbjct:    8 KQSIIEEYATHEGDTGSPEVQVAVLTRRISDLTEHLKS-HKHDHHTRRGLMAMVGRRRRMLTYLQNTDIERYRSLIQRLGL 87          
BLAST of mRNA_H-paniculata_contig5220.12587.1 vs. uniprot
Match: A0A0S7ZVL0_9BACT (30S ribosomal protein S15 n=1 Tax=Gemmatimonas sp. SG8_17 TaxID=1703355 RepID=A0A0S7ZVL0_9BACT)

HSP 1 Score: 76.3 bits (186), Expect = 5.680e-15
Identity = 38/81 (46.91%), Postives = 54/81 (66.67%), Query Frame = 0
Query:  109 RQLAIEHWCRHTTDTGSPACQIATLTIRIDALRHHLATLHGKDKSTKRGYLALLNRRQRMLAYLKRTDFDTYRKIHQELGL 189
            +Q  ++ + RH  DTGS   Q+A LT RI+ L  H  T H KD   +RG LA++++R+R+L YLKRTD + YR++  ELGL
Sbjct:    5 KQAVVQKYQRHAGDTGSARVQVAVLTERINTLTDHFRT-HAKDHHGRRGLLAMVSKRRRLLDYLKRTDLEGYRQLITELGL 84          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5220.12587.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KPK4_9PHAE2.790e-3655.20Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LI83_ECTSI4.170e-2455.67RpsO n=1 Tax=Ectocarpus siliculosus TaxID=2880 Rep... [more]
A0A7S2FKX4_9STRA1.190e-1740.5230S ribosomal protein S15 n=1 Tax=Florenciella par... [more]
A0A8J5XJJ3_DIALT5.050e-1746.94Uncharacterized protein n=2 Tax=Diacronema lutheri... [more]
A0A6G7PVF4_9BACT1.420e-1653.2530S ribosomal protein S15 n=1 Tax=Thermosulfuriphi... [more]
A0A2H5W8Q7_9BACT7.870e-1655.8430S ribosomal protein S15 n=1 Tax=bacterium HR11 T... [more]
A0A7S2MPL4_9STRA9.120e-1638.02Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
A0A1Z5JKK0_FISSO2.280e-1539.81Small subunit ribosomal protein S15 n=2 Tax=Fistul... [more]
M2XCM9_9MICC4.360e-1548.1530S ribosomal protein S15 n=4 Tax=Kocuria palustri... [more]
A0A0S7ZVL0_9BACT5.680e-1546.9130S ribosomal protein S15 n=1 Tax=Gemmatimonas sp.... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000589Ribosomal protein S15SMARTSM01387Ribosomal_S15_2coord: 108..190
e-value: 1.3E-21
score: 87.8
IPR000589Ribosomal protein S15PFAMPF00312Ribosomal_S15coord: 111..189
e-value: 3.3E-25
score: 88.1
NoneNo IPR availableGENE3D1.10.287.10coord: 103..190
e-value: 3.4E-24
score: 86.9
NoneNo IPR availablePRODOMPD157043coord: 113..189
e-value: 2.0E-12
score: 174.0
IPR005290Ribosomal protein S15, bacterial-typeTIGRFAMTIGR00952TIGR00952coord: 110..189
e-value: 3.7E-21
score: 73.2
IPR005290Ribosomal protein S15, bacterial-typePANTHERPTHR23321RIBOSOMAL PROTEIN S15, BACTERIAL AND ORGANELLARcoord: 82..189
IPR005290Ribosomal protein S15, bacterial-typeHAMAPMF_01343_BRibosomal_S15_Bcoord: 99..190
score: 14.643
IPR009068S15/NS1, RNA-bindingSUPERFAMILY47060S15/NS1 RNA-binding domaincoord: 108..189

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5220contigH-paniculata_contig5220:5178..8361 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5220.12587.1mRNA_H-paniculata_contig5220.12587.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig5220 5157..9347 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig5220.12587.1 ID=prot_H-paniculata_contig5220.12587.1|Name=mRNA_H-paniculata_contig5220.12587.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=191bp
MMYSLGVRSGVRMGVDAVQKTYCGVGPLFVQRMAIAAVATSAGPLTISSR
RAWYGHERPNLLLGRGLATEVDRMQHNIRVKEGMSISDPVKRVLAIENAS
RQQQKQLARQLAIEHWCRHTTDTGSPACQIATLTIRIDALRHHLATLHGK
DKSTKRGYLALLNRRQRMLAYLKRTDFDTYRKIHQELGLS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000589Ribosomal_S15
IPR005290Ribosomal_S15_bac-type
IPR009068S15_NS1_RNA-bd