mRNA_H-paniculata_contig5220.12587.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig5220.12587.1
Unique NamemRNA_H-paniculata_contig5220.12587.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig5220.12587.1 vs. uniprot
Match: A0A6H5KPK4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPK4_9PHAE)

HSP 1 Score: 132 bits (331), Expect = 1.250e-32
Identity = 69/125 (55.20%), Postives = 93/125 (74.40%), Query Frame = 1 
Query:  214 RGLATEVDRMQHNIRVKEGMSISDPVKRVLAIENASRQQQKQLARQLAIEHWCRHTTDTGSPACQIATLTIRIDALRHHLATLHGKDKSTKRGYLALLNRRQRMLAYLKRTDFDTYRKIHQELGL 588
            RGLA+E  RM + I++ EG+ +SDPV+RVL+I+N++  Q+K+L ++L +E W RH  DTGSP CQIA LT+RIDALR  + +    D S KRGY+ LL RR++MLAYLKR DF+ YRK+  E GL
Sbjct:   37 RGLASE--RMVYGIKIPEGVKVSDPVRRVLSIDNSTMPQKKKLLKRLELEKWQRHAGDTGSPECQIAALTVRIDALRPLVNSTARMDFSCKRGYVKLLARRRKMLAYLKRKDFEIYRKVALETGL 159
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BLAST of mRNA_H-paniculata_contig5220.12587.1 vs. uniprot
Match: D8LI83_ECTSI (RpsO n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI83_ECTSI)

HSP 1 Score: 99.0 bits (245), Expect = 2.080e-21
Identity = 54/97 (55.67%), Postives = 69/97 (71.13%), Query Frame = 1 
Query:  301 LAIENASRQ-QQKQLARQLAIEHWCRHTTDTGSPACQIATLTIRIDALRHHLATLHGKDKSTKRGYLALLNRRQRMLAYLKRTDFDTYRKIHQELGL 588
            +A  N SR+ Q+K+L ++L +E W RH  DTGSP CQIA LT+RIDALR  + +    D S KRGY+ LL RR++MLAYLKR DF+ YRK+  E GL
Sbjct:    1 MAQTNLSRKPQKKKLLKRLELEKWQRHAGDTGSPECQIAALTVRIDALRPLVNSTARMDFSCKRGYVKLLARRRKMLAYLKRKDFEIYRKVALETGL 97
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BLAST of mRNA_H-paniculata_contig5220.12587.1 vs. uniprot
Match: A0A7S2FKX4_9STRA (30S ribosomal protein S15 n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FKX4_9STRA)

HSP 1 Score: 83.6 bits (205), Expect = 1.770e-15
Identity = 47/116 (40.52%), Postives = 72/116 (62.07%), Query Frame = 1 
Query:  241 MQHNIRVKEGMSISDPVKRVLAIENASRQQQKQLARQLAIEHWCRHTTDTGSPACQIATLTIRIDALRHHLATLHGKDKSTKRGYLALLNRRQRMLAYLKRTDFDTYRKIHQELGL 588
            ++  I+ +    +S+ V+RVL++ NAS  +  Q     AIE +     DTGS   Q+A LT++I+ +R HL   H KD  +KRG + L+N+R+++L YLKRTDFD+YR+    L L
Sbjct:   18 LRFGIKPETVPEVSEAVRRVLSMANASNAEVTQAKVARAIEAFASRPGDTGSTPVQVAVLTVKIENVRAHLKQ-HVKDNPSKRGLVMLVNKRRKLLKYLKRTDFDSYRRTVYSLNL 132
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BLAST of mRNA_H-paniculata_contig5220.12587.1 vs. uniprot
Match: A0A8J5XJJ3_DIALT (Uncharacterized protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XJJ3_DIALT)

HSP 1 Score: 83.6 bits (205), Expect = 5.500e-15
Identity = 46/98 (46.94%), Postives = 63/98 (64.29%), Query Frame = 1 
Query:  277 ISDPVKRVLAIENASRQQQKQLARQLAIEHWCRHTTDTGSPACQIATLTIRIDALRHHLATLHGKDKSTKRGYLALLNRRQRMLAYLKRTDFDTYRKI 570
            + + V+R +++ENAS   + ++    AIEHW     DTGSPA QIATLT+RID L  HLA+ H KDK++KR    L+ +R R L YL   D + YRK+
Sbjct:   63 LGESVRRAVSLENASSSDRMKVELHRAIEHWQARPGDTGSPAVQIATLTVRIDYLTRHLAS-HHKDKASKRIMYKLVGQRNRTLKYLLSEDRNMYRKV 159
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BLAST of mRNA_H-paniculata_contig5220.12587.1 vs. uniprot
Match: A0A6G7PVF4_9BACT (30S ribosomal protein S15 n=1 Tax=Thermosulfuriphilus ammonigenes TaxID=1936021 RepID=A0A6G7PVF4_9BACT)

HSP 1 Score: 79.3 bits (194), Expect = 1.440e-14
Identity = 41/77 (53.25%), Postives = 54/77 (70.13%), Query Frame = 1 
Query:  358 IEHWCRHTTDTGSPACQIATLTIRIDALRHHLATLHGKDKSTKRGYLALLNRRQRMLAYLKRTDFDTYRKIHQELGL 588
            IE +  H +DTGSP  QIA LT RI+ L  H   +H KD  ++RG L ++ +R+R+L YLKRTDFD YR+I +ELGL
Sbjct:   12 IERFKLHDSDTGSPEVQIALLTARINHLTEHFK-VHKKDHHSRRGLLKMVGQRRRLLQYLKRTDFDRYRRIVKELGL 87
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BLAST of mRNA_H-paniculata_contig5220.12587.1 vs. uniprot
Match: A0A2H5W8Q7_9BACT (30S ribosomal protein S15 n=1 Tax=bacterium HR11 TaxID=2035406 RepID=A0A2H5W8Q7_9BACT)

HSP 1 Score: 77.4 bits (189), Expect = 6.860e-14
Identity = 43/77 (55.84%), Postives = 52/77 (67.53%), Query Frame = 1 
Query:  358 IEHWCRHTTDTGSPACQIATLTIRIDALRHHLATLHGKDKSTKRGYLALLNRRQRMLAYLKRTDFDTYRKIHQELGL 588
            IE + RH TDTGS    IA LT RI  L  HL   H KD S+KRG L L+ RR+R+LAYL+R DFD Y+++ Q LGL
Sbjct:   12 IEQFRRHETDTGSTEIVIALLTQRIQHLSEHLRR-HPKDFSSKRGLLRLVGRRRRLLAYLRRKDFDRYQQVIQALGL 87
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BLAST of mRNA_H-paniculata_contig5220.12587.1 vs. uniprot
Match: A0A7S2MPL4_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2MPL4_9STRA)

HSP 1 Score: 81.3 bits (199), Expect = 1.240e-13
Identity = 46/121 (38.02%), Postives = 78/121 (64.46%), Query Frame = 1 
Query:  229 EVDRMQHNIRVK-EGMSISDPVKRVLAIENASRQQQKQLARQLAIEHWCRHTTDTGSPACQIATLTIRIDALRHHLATLHGKDKSTKRGYLALLNRRQRMLAYLKRTDFDTYRKIHQELGL 588
            +++  + ++R +  G+ +SD VK++  + N S+++  +  ++  +E +     DTGS A Q+  LT RI  L+ H+ T H KDKS+KRG  AL  RR+++L Y++R DFD+YRK+ + LGL
Sbjct:  126 KINTQKESLRFRFSGLEMSDRVKKLFDLTNGSQKEVVKAQKERGMELFQLREGDTGSSAVQVIALTTRIQQLQTHM-TKHKKDKSSKRGLDALYVRRRKVLDYMERKDFDSYRKVVKTLGL 245
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BLAST of mRNA_H-paniculata_contig5220.12587.1 vs. uniprot
Match: A0A1Z5JKK0_FISSO (Small subunit ribosomal protein S15 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JKK0_FISSO)

HSP 1 Score: 80.1 bits (196), Expect = 2.810e-13
Identity = 43/108 (39.81%), Postives = 74/108 (68.52%), Query Frame = 1 
Query:  268 GMSISDPVKRVLAIENASRQQQKQLARQLAIEHWCRHTTDTGSPACQIATLTIRIDALRHHLATLHGKDKSTKRGYLALLNRRQRMLAYLKRTDFDTYRKIHQELGLS 591
            G+ +S+ V+++  ++NAS+ ++ +  +Q  ++ +     DTGS A QIA L+ RI  ++ H+ T H KDK +KRG  AL +RR++ML YL+R DF++YR++ + LGL+
Sbjct:  135 GIQMSERVQKLFDLQNASQMERIKSQKQKVMQIFQYRPGDTGSSAVQIAALSTRIQQMQAHM-TKHKKDKHSKRGMEALFSRRRKMLDYLERKDFESYRRVVKALGLA 241
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BLAST of mRNA_H-paniculata_contig5220.12587.1 vs. uniprot
Match: M2XCM9_9MICC (30S ribosomal protein S15 n=4 Tax=Kocuria palustris TaxID=71999 RepID=M2XCM9_9MICC)

HSP 1 Score: 75.5 bits (184), Expect = 3.260e-13
Identity = 39/81 (48.15%), Postives = 51/81 (62.96%), Query Frame = 1 
Query:  346 RQLAIEHWCRHTTDTGSPACQIATLTIRIDALRHHLATLHGKDKSTKRGYLALLNRRQRMLAYLKRTDFDTYRKIHQELGL 588
            +Q  IE +  H  DTGSP  Q+A LT RI  L  HL + H  D  T+RG +A++ RR+RML YL+ TD + YR + Q LGL
Sbjct:    8 KQSIIEEYATHEGDTGSPEVQVAVLTRRISDLTEHLKS-HKHDHHTRRGLMAMVGRRRRMLTYLQNTDIERYRSLIQRLGL 87
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BLAST of mRNA_H-paniculata_contig5220.12587.1 vs. uniprot
Match: A0A0S7ZVL0_9BACT (30S ribosomal protein S15 n=1 Tax=Gemmatimonas sp. SG8_17 TaxID=1703355 RepID=A0A0S7ZVL0_9BACT)

HSP 1 Score: 75.1 bits (183), Expect = 4.110e-13
Identity = 38/81 (46.91%), Postives = 54/81 (66.67%), Query Frame = 1 
Query:  346 RQLAIEHWCRHTTDTGSPACQIATLTIRIDALRHHLATLHGKDKSTKRGYLALLNRRQRMLAYLKRTDFDTYRKIHQELGL 588
            +Q  ++ + RH  DTGS   Q+A LT RI+ L  H  T H KD   +RG LA++++R+R+L YLKRTD + YR++  ELGL
Sbjct:    5 KQAVVQKYQRHAGDTGSARVQVAVLTERINTLTDHFRT-HAKDHHGRRGLLAMVSKRRRLLDYLKRTDLEGYRQLITELGL 84
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5220.12587.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KPK4_9PHAE1.250e-3255.20Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LI83_ECTSI2.080e-2155.67RpsO n=1 Tax=Ectocarpus siliculosus TaxID=2880 Rep... [more]
A0A7S2FKX4_9STRA1.770e-1540.5230S ribosomal protein S15 n=1 Tax=Florenciella par... [more]
A0A8J5XJJ3_DIALT5.500e-1546.94Uncharacterized protein n=2 Tax=Diacronema lutheri... [more]
A0A6G7PVF4_9BACT1.440e-1453.2530S ribosomal protein S15 n=1 Tax=Thermosulfuriphi... [more]
A0A2H5W8Q7_9BACT6.860e-1455.8430S ribosomal protein S15 n=1 Tax=bacterium HR11 T... [more]
A0A7S2MPL4_9STRA1.240e-1338.02Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
A0A1Z5JKK0_FISSO2.810e-1339.81Small subunit ribosomal protein S15 n=2 Tax=Fistul... [more]
M2XCM9_9MICC3.260e-1348.1530S ribosomal protein S15 n=4 Tax=Kocuria palustri... [more]
A0A0S7ZVL0_9BACT4.110e-1346.9130S ribosomal protein S15 n=1 Tax=Gemmatimonas sp.... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5220contigH-paniculata_contig5220:5157..9347 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score78.6
Seed ortholog evalue3.6e-12
Seed eggNOG ortholog667014.Thein_1642
Preferred namerpsO
KEGG koko:K02956
KEGG Pathwayko03010,map03010
KEGG ModuleM00178,M00179
Hectar predicted targeting categoryother localisation
GOsGO:0000028,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006139,GO:0006378,GO:0006396,GO:0006397,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016020,GO:0016043,GO:0016070,GO:0016071,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0031123,GO:0031124,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043631,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904
EggNOG free text desc.Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
EggNOG OGs2GHY4@200940,COG0184@1,COG0184@2
Ec32 ortholog descriptionS15/NS1, RNA-binding
Ec32 orthologEc-14_003560.1
COG Functional cat.J
Best tax levelThermodesulfobacteria
Best eggNOG OGNA|NA|NA
BRITEbr01610,ko00000,ko00001,ko00002,ko03011
Exons3
Model size1580
Cds size573
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5220.12587.1prot_H-paniculata_contig5220.12587.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig5220 5178..8361 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930520.2830448-UTR-H-paniculata_contig5220:5156..51771622930520.2830448-UTR-H-paniculata_contig5220:5156..5177Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig5220 5157..5177 +
1691481329.3022535-UTR-H-paniculata_contig5220:5156..51771691481329.3022535-UTR-H-paniculata_contig5220:5156..5177Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig5220 5157..5177 +
1622930520.3463838-UTR-H-paniculata_contig5220:8361..93471622930520.3463838-UTR-H-paniculata_contig5220:8361..9347Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig5220 8362..9347 +
1691481329.349262-UTR-H-paniculata_contig5220:8361..93471691481329.349262-UTR-H-paniculata_contig5220:8361..9347Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig5220 8362..9347 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930520.296954-CDS-H-paniculata_contig5220:5177..54791622930520.296954-CDS-H-paniculata_contig5220:5177..5479Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5220 5178..5479 +
1691481329.3174365-CDS-H-paniculata_contig5220:5177..54791691481329.3174365-CDS-H-paniculata_contig5220:5177..5479Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5220 5178..5479 +
1622930520.310135-CDS-H-paniculata_contig5220:6632..67181622930520.310135-CDS-H-paniculata_contig5220:6632..6718Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5220 6633..6718 +
1691481329.3279166-CDS-H-paniculata_contig5220:6632..67181691481329.3279166-CDS-H-paniculata_contig5220:6632..6718Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5220 6633..6718 +
1622930520.3292336-CDS-H-paniculata_contig5220:8176..83611622930520.3292336-CDS-H-paniculata_contig5220:8176..8361Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5220 8177..8361 +
1691481329.3384547-CDS-H-paniculata_contig5220:8176..83611691481329.3384547-CDS-H-paniculata_contig5220:8176..8361Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5220 8177..8361 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig5220.12587.1

>prot_H-paniculata_contig5220.12587.1 ID=prot_H-paniculata_contig5220.12587.1|Name=mRNA_H-paniculata_contig5220.12587.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=191bp
MMYSLGVRSGVRMGVDAVQKTYCGVGPLFVQRMAIAAVATSAGPLTISSR
RAWYGHERPNLLLGRGLATEVDRMQHNIRVKEGMSISDPVKRVLAIENAS
RQQQKQLARQLAIEHWCRHTTDTGSPACQIATLTIRIDALRHHLATLHGK
DKSTKRGYLALLNRRQRMLAYLKRTDFDTYRKIHQELGLS*
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mRNA from alignment at H-paniculata_contig5220:5157..9347+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig5220.12587.1 ID=mRNA_H-paniculata_contig5220.12587.1|Name=mRNA_H-paniculata_contig5220.12587.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4191bp|location=Sequence derived from alignment at H-paniculata_contig5220:5157..9347+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GACACCTTTCGTTGGAACATCATGATGTATTCTCTGGGTGTACGATCAGG
TGTCCGGATGGGTGTAGATGCGGTGCAAAAGACCTACTGTGGTGTTGGAC
CACTCTTCGTTCAGCGCATGGCGATAGCAGCAGTAGCAACCTCAGCAGGA
CCGTTAACAATTTCTTCCAGGCGTGCCTGGTATGGCCATGAACGACCAAA
CCTGCTGCTCGGGAGAGGGTTGGCGACCGAAGTGGATAGGATGCAGCACA
ATATTAGGGTCAAGGAAGGCATGAGTATATCCGATCCCGTCAAGCGAGTC
TTGGCCATCGAGAATGCTAGTCGGTGAGTGATGTCAGCTTGAATGATGGA
AATGTTGATGTGTGCTGGTGAGCAACTATGTTATTACATACTGGAACACT
CACGATCAAGGGTGTTCGTTGAAAAGGCACAGGACGGAAGGCCTTGTGGA
CGGCACAGTCAGTGAACAACGGTTGTACCGCTCAACTGATTGTGTAGACG
TTTTGGTTCAACAGGGTACCTTATTCCTGTGCCTTGTACTCCTGATTATA
CAATTAAACGTCACCCGACTACTATACGAGTGAGATTGTGTACATCCAGT
AGTGTTGTTGATCAGATGGTTAGGCGATCTTCGAGGCAGCAGCGGCAACG
GCGGCAATACCTTGTAACGGCTACAAACAGTTCCACTTGGCACTATTCAT
GTGCCTCCAAATCAAATGTTCCCTGCGGTTACTGGTGTGTCGCTTTGGTA
GATAACGCGGCGTCTGTATGGTTGACAGGTGGCGTGGCATCCATGGCTGA
CCGCCGTGCATAATGCAACTTCGTTATTCTGGTAACAGTCATGTTGTACA
ATGGCCACTTGATACTACTCACATTGCCTGCACCAAGCGCGGATTCGATA
CGGTGTGCAGGCAGGTGGACATGAACAGGTACAAAAGTGGGTAGAATCGA
CTAATGTTGGACAGGGAAAGGGGAAACCTACTTCAAGTAGAATGATATGT
GGGAGTAAATGAACACATTTTACTGTTTCTAAACATCATCCGTCGATTGC
CCAGTAGTTTGAGTACTGCTATGCACCCATTTAGTTTGTTTTCCGTCGTT
CTTTTTTCTATTAGGGTGTTTGAAAGGATGCAACCGCGAGCCGTGAGCAC
AAAGCGGAATGGTTATGAGTCATTTCAGTGTGTCAATAGACAGTTTCAAA
GTTGCCCCATACCTGTATATACCTGAAACTGTCCAAAAATGACTTAGGAT
ATTATTTTAGAGTACACCGCTCTGAAGTATATTTCGAGGGAATACACCTG
TCATAACTCCGGATTTTGCCAACTACCGTCACGCGTATTTGCTCTGAAAA
ACACGCTATGATGCGTCTTACAATGCGTGACAGAAGATATCGGCGATCAT
AGCCCTGCTTCCTGTACACAGCTGTTCAAAATGCGCTCTTTGTTCTATTT
GTTATGTCATGGCGCGACGAACACAGGCAACAGCAGAAGCAGCTGGCTCG
GCAGCTGGCGATCGAGCACTGGTGCCGCCACACGACAGACACAGGGTCTC
CGGCTTGCCAGAGTGAGTGTGCATACTGCTTCAGCAGTTTTTGTGTTTAC
CCACCCGATTTCGCGGTCGGTGACGGCACTGGCGGGTACCAGTAGATTTT
CACCCAATTCTCGGGGTCAGCCGTTTGCTGTTCTCTCGATGTGTTGATTC
GAAGGTGGTAAACGCAGTTCCTGTTGATTCGGGGCGCAAGATGAGCGCGA
ATCAATCACTGATGCTCGTTCAGCCAATGGGAAAATGCTCTTCTCAGACA
TGAAGAGAACCCACTCCCTTGCCTTTACAGTCGCCTATATCCCAATTTTC
CAGCACACCACACCTTTTTGCACGGAAAGGGGAGCCCAAAAAGAAAATCT
GAGAAATATAGATTTTCAAGGTGTGAGCCACCAAGGGTTTGGGATACTGG
TAATGCTGATCATCGTATCGAAATGGTTCCGTACATTATCCAAGTGTTTT
GCATAGACTGTCGCATGACACGGAACTGTGGATTTTTATTCCATTCATCA
CAAAAAAATGCATCGTACTTTATTCCCTCCCACGTGCTTCCAAGTTTTGT
TTTTGTAGACTACAGCAGGGACTACGGGGTGTGCCACAGTGCCAAATAGC
AAATATTGCTCTGACAGCGTACAATGGGTGCGCTGCACTCTCAGAGGCCG
TATCTATTACAATCTATGTACCAGACTGATGTAATCTCCCGTTTCAAATC
AGAGGGTGGTGCGCACGACGATGACGGCAGGGCATTGTGATAAACATATG
CCGCACAAAATAACAGACCCAATGCAACCTGTATGCATGGCTCAACAGCA
TAAAAAACAGGCCAGTGTATGAGCGCTTTCTGAGAACAGCTTAACGACAA
AAGCGTTAGTAGGTGAAACAAGCAGATCGATCTAATAGCAGAGCAACAGA
GAGTGGCGTCTGTTTGTCTATCCCTGTTCATCTGTTTTTTCTCCACCACG
TCGAGTTGATCGCTCAGACCCGCGGTCAGAGTACAGAAACTGGCCGGTGT
CTGGTAAGACCATGGCAGTGTCGGCTGTGCGCTACTGCGTAGGTCGCCGA
CGGTACTTAATGGCGCTTCATATCAGCATTCTTATGTACGTAAACCGTGC
CGCGCAAAGCGGGCTATCGCAAGCGTAGCCACAAGTGGGATAGAGATATA
ATGCTTTAAATGATGAGAGGGGGATCGCAAGGGAATATATGTGAAACTTC
GACACAAACAGGTGGTGACTATACGAACAACAGATTACACGAATATGGAT
GATAGGTTATAGACTGGGCTACGGTGACAAGCGACTGACAGGATTGGCTT
AACCGTACTCGGTTACTACCCCTGTTACTGGAAAAGTTGTAACAACCGAA
TACGTCTAAACCATGAAGAGCTCTGCGCTGCCGCCGCCCCGCCCCCCCGG
TCTCTTCTGTACTTGTTTTGGCCTCTCTTGACCGTCTGTTGTTGAAACAA
ACGAACACAACAACATATAGTTGCGACGTTGACGATCAGAATCGACGCCC
TTCGCCATCATCTCGCCACGCTGCACGGAAAGGACAAATCCACGAAGCGA
GGGTACCTCGCGCTGCTTAACCGTAGGCAGAGGATGCTGGCGTACCTCAA
GCGCACTGATTTCGACACCTACCGGAAGATCCATCAGGAGCTAGGGTTAA
GTTAAGCGAACACATTCCAAGCAAGCGCGTGGCGCGGTGGGCGAGCCCGC
GGTCATCTCGTGGTGGGGCTTGGGGAAACAGGTTGGAAGAGACACGAAAG
GGTCTGATACACGATCTATTTTTTGTCTGTCTCGGCCTTTTCCTCAAGCC
CTTGGAAACATAACGTCACTGGAAAGTCCCGGTTGCACGACAACAGTTGG
TTGTAGGGCGGGACATCTATATTTTGGTGTAGTAGCCTACGACTGTATTC
GTGAGGGAAACTGATACAATATTAAACGTAGGGTGTGGCCTGCTTATAGC
ATTGAGCAAACGGGTTGGCTATTGCGCGCTTCTAACAGTAAACTGAAACC
TTCACAAACCGGTGTCATGGAGATACATACGCATTGATGTATGTGCAGAG
CTCTACATAATCGCGCCTGATGTCTGTTATCTCTGGCGTATGTCGACCAT
GCGCTGGGCATATTAACTTCGATAAGAGCACGACAGAGCACGTTCTCCGA
GTGCTTTGGGGAGGATTTTCTCCGTGAGGGGTAATGCACGTTTGAGGGTA
ATTCGCATCCCGCAAATGCCTTTCGTCGCAGGAACTCGTGGTGGTAAGTC
TGCTCGCAGTGAGCAGGTATTACTCTCTACTTACTGTATGGGAGGTGCCA
TTCGACTGACTTGATGCTTCATAGTACATTAGGCCCGCCTTCGGAGGGGG
GGGGGTTGATTTGGTGCAAAGCGGAGTAGTAGGTGGACGTCATTTTGTCC
ATGTGGTTTCCTCTCGTCTTGGAGTTTTGGGATTTCCATTGATTGGTTTT
GGGCAAACGACAAAAAGATATTTGTATTGCTGGACTATCCTAAGTCACAA
CGATGTATATCTTGTACAGCGCAATTTAATCTGCCTACTACGCACTCATT
TGATTGGCCCGAAGACCCTACCTGCTTTTGGCGACAGAAGGCACCTACAA
TCCCACACCAACCCTTTGCCACAACTTCCAATCTCTAGAAA
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Coding sequence (CDS) from alignment at H-paniculata_contig5220:5157..9347+

>mRNA_H-paniculata_contig5220.12587.1 ID=mRNA_H-paniculata_contig5220.12587.1|Name=mRNA_H-paniculata_contig5220.12587.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1146bp|location=Sequence derived from alignment at H-paniculata_contig5220:5157..9347+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGATGTATTCTCTGGGTGTACGATCAGGTGTCCGGATGGGTGTAGATGC
GGTGCAAAAGACCTACTGTGGTGTTGGACCACTCTTCGTTCAGCGCATGG
CGATAGCAGCAGTAGCAACCTCAGCAGGACCGTTAACAATTTCTTCCAGG
CGTGCCTGGTATGGCCATGAACGACCAAACCTGCTGCTCGGGAGAGGGTT
GGCGACCGAAGTGGATAGGATGCAGCACAATATTAGGGTCAAGGAAGGCA
TGAGTATATCCGATCCCGTCAAGCGAGTCTTGGCCATCGAGAATGCTAGT
CGATGATGTATTCTCTGGGTGTACGATCAGGTGTCCGGATGGGTGTAGAT
GCGGTGCAAAAGACCTACTGTGGTGTTGGACCACTCTTCGTTCAGCGCAT
GGCGATAGCAGCAGTAGCAACCTCAGCAGGACCGTTAACAATTTCTTCCA
GGCGTGCCTGGTATGGCCATGAACGACCAAACCTGCTGCTCGGGAGAGGG
TTGGCGACCGAAGTGGATAGGATGCAGCACAATATTAGGGTCAAGGAAGG
CATGAGTATATCCGATCCCGTCAAGCGAGTCTTGGCCATCGAGAATGCTA
GTCGGCAACAGCAGAAGCAGCTGGCTCGGCAGCTGGCGATCGAGCACTGG
TGCCGCCACACGACAGACACAGGGTCTCCGGCTTGCCAGAGCAACAGCAG
AAGCAGCTGGCTCGGCAGCTGGCGATCGAGCACTGGTGCCGCCACACGAC
AGACACAGGGTCTCCGGCTTGCCAGATTGCGACGTTGACGATCAGAATCG
ACGCCCTTCGCCATCATCTCGCCACGCTGCACGGAAAGGACAAATCCACG
AAGCGAGGGTACCTCGCGCTGCTTAACCGTAGGCAGAGGATGCTGGCGTA
CCTCAAGCGCACTGATTTCGACACCTACCGGAAGATCCATCAGGAGCTAG
GGTTAAGTTAATTGCGACGTTGACGATCAGAATCGACGCCCTTCGCCATC
ATCTCGCCACGCTGCACGGAAAGGACAAATCCACGAAGCGAGGGTACCTC
GCGCTGCTTAACCGTAGGCAGAGGATGCTGGCGTACCTCAAGCGCACTGA
TTTCGACACCTACCGGAAGATCCATCAGGAGCTAGGGTTAAGTTAA
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