prot_H-paniculata_contig5220.12586.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig5220.12586.1
Unique Nameprot_H-paniculata_contig5220.12586.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length266
Homology
BLAST of mRNA_H-paniculata_contig5220.12586.1 vs. uniprot
Match: A0A6H5KL07_9PHAE (SMI1_KNR4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KL07_9PHAE)

HSP 1 Score: 227 bits (579), Expect = 1.890e-69
Identity = 145/314 (46.18%), Postives = 171/314 (54.46%), Query Frame = 0
Query:    3 RLGFDFLAHLEAMRGKG--VRSINISDSKQAPVAALTVWEDTNYPYRQGKRLPEDLRAFLCTSDGLSLSWTVKLHGKGGEGGGPGGSSDREVVAGRIYVGGVSAITRIPLDADDLRSIKLSSR----------------------------------------CVADAIAADAPAXXPGALDLDRDDTTGNRDAYDLAAFSIDSACEVGRVALVYG-VP------------RRSPPPRRRGSRSCSGENSRVTSRSAVEAWLVNPEVWIQDLSCRWHFLADSFTSYFRVMAVHLGVLGWQQAFSPVGLSPITEN 261
            RLGFD +AHLEAMRGKG  +R   I D  QA  AAL VWED+N+PYR    LPEDLRAFL TS+G SL W  K   +  E GG GG    E V GRI V  +SA+TRIPLD DDLR +  +                                            A   A  AP+    + D  +   T +  AY +AAF +DS+CEVGRVALVYG  P            RR  P  R  S   + E     ++++    L NPEVW+QDLSCRWHFLAD FTSYFR+M +HLGVLGWQQAF+PVGLSP TE 
Sbjct:   14 RLGFDMMAHLEAMRGKGMGIRDFEIQDCVQASAAALRVWEDSNFPYR----LPEDLRAFLRTSNGFSLEWASKQQQRSPEEGGSGG----ENVIGRIRVDSLSAMTRIPLDEDDLRDMAYARTRAXXXXXXXXXXSLPRRRPRFPSSGHGDNGLDAKGFHGGGTAAVLAATFAPS---SSEDHAKTPATSSSSAYGIAAFCVDSSCEVGRVALVYGGTPVMGSGGDTDFGERRERP--RNSSNGSTREKDSSRNKASATQELSNPEVWLQDLSCRWHFLADGFTSYFRMMVLHLGVLGWQQAFTPVGLSPTTEQ 314          
BLAST of mRNA_H-paniculata_contig5220.12586.1 vs. uniprot
Match: C1EEH4_MICCC (SMI1_KNR4 domain-containing protein n=3 Tax=Micromonas TaxID=38832 RepID=C1EEH4_MICCC)

HSP 1 Score: 102 bits (255), Expect = 1.510e-22
Identity = 78/252 (30.95%), Postives = 115/252 (45.63%), Query Frame = 0
Query:   19 GVRSINISDSKQAPVAALTVWEDTNYPYRQGKRLPEDLRAFLCTSDGLSLSWTVKLHGKGGEGGGPGGSSDREVV-AGRIYVGGVSAITRIPL------DADDLRSIKLSSRCVADAIAADAPAXXPGALDLDRDDTTGNRDAYDLAAFSIDSACEVGRVALVYGVPRRSPPPRRRGSRSCSGEN--SRVTSRSAVEAWLVNPEVWIQDLSCRWHFLADSFTSYFRVMAVHLGVLGWQQAFSPVGLS-PITE 260
            GV+ +     K A ++ +  WED N P++    LPEDL+AFL +SDG  ++W V                 +EV   G +++  ++ I ++P+      DAD      +    V D    D  A  P           G +  +  AAF +DS+   GRVALV+ VP            S SG N    +T   +V       +VW QD+S RWH +ADSF+ Y+R+M  HLG+  W      VG+  P T+
Sbjct:   17 GVQDVKYVQGKPATMSDIQAWEDANSPFK----LPEDLKAFLLSSDGFKMTWDVLFK--------------QEVHHLGNMHINSLAEIKKMPMMLVPHDDADXXXXXVVPPGSVWDPRREDDGARGPD----------GWKPPFPSAAFDLDSSVRHGRVALVF-VPSFEA--------SSSGPNVGDELTPMRSVPH---KAQVWFQDISTRWHIMADSFSEYYRLMTAHLGLPRWHYKLMDVGMDRPTTQ 228          
BLAST of mRNA_H-paniculata_contig5220.12586.1 vs. uniprot
Match: A0A078AC72_STYLE (SMI1_KNR4 domain-containing protein n=2 Tax=Oxytrichidae TaxID=57506 RepID=A0A078AC72_STYLE)

HSP 1 Score: 102 bits (253), Expect = 7.920e-22
Identity = 71/239 (29.71%), Postives = 107/239 (44.77%), Query Frame = 0
Query:   19 GVRSINISDSKQAPVAALTVWEDTNYPYRQGKRLPEDLRAFLCTSDGLSLSWTVKLHGKGGEGGGPGGSSDREVVAGRIYVGGVSAITRIPLDADDLRSIKLSSRCVADAIAADAPAXXPGALDLDRDDTTGNRDAYDLAAFSIDSACEVGRVALVYGVPRRSPPPRRRGSRSCSGENSRVTSRSAVEAWLVNPEVWIQDLSCRWHFLADSFTSYFRVMAVHLGVLGWQQAFSPVGLSP 257
            GV  +   + +     ++  WE+ N PY     LP+D +AFL  SDGLSL+W +K +             D+    G +++  +  I R+ +D       K SS    +  + + P+                 +  D+AAF IDS  + GR+AL+Y           RG+ +                    P++W QDLSC W F+A  FT YFR+M +HLG+  WQ AF+ VGL P
Sbjct:   26 GVTDVEFIERQGVAEMSIQKWEEENSPYL----LPDDYKAFLQISDGLSLNWKIKKN-------------DQIFPLGSMHLNKLRDIKRLKMD-----RFKFSSVGEEEETSDEEPS----------------EEQKDIAAFDIDSKVKDGRLALIY-----------RGNTN-------------------KPQIWFQDLSCSWFFIAYKFTDYFRLMIMHLGLPHWQYAFTQVGLDP 196          
BLAST of mRNA_H-paniculata_contig5220.12586.1 vs. uniprot
Match: A0A8J1Y6S3_OWEFU (Ofus.G17786 protein n=1 Tax=Owenia fusiformis TaxID=6347 RepID=A0A8J1Y6S3_OWEFU)

HSP 1 Score: 97.4 bits (241), Expect = 4.100e-20
Identity = 69/252 (27.38%), Postives = 104/252 (41.27%), Query Frame = 0
Query:   18 KGVRSINISDSKQAPVAALTVWEDTNYPYRQGKRLPEDLRAFLCTSDGLSLSWTVKLHGKGGEGGGPGGSSDREVVAGRIYVGGVSAITRI--------PLDADDLRSIKLSSRCVADAIAADAPAXXPGALDLDRDDTTGNRDAYDLAAFSIDSACEVGRVALVYGVPRRSPPPRRRGSRSCSGENSRVTSRSAVEAWLVNPEVWIQDLSCRWHFLADSFTSYFRVMAVHLGVLGWQQAFSPVGLSPITEN 261
            KG+  + + +   A    +  WE  +  +     LPED+++F  T+DGL L W+VK++             D  +  GR+ + G+S +T+I           A DL  I+ S     D                   +T+  R       F +D     G V LVY   +   P                           +PE+W  D + RWHFLAD+FT+YFR+M  H+G+  WQ AF+ +GLSP  E 
Sbjct:   25 KGICDVRLIEKTPAERHTVISWEQKHSCF-----LPEDVKSFFLTTDGLVLKWSVKVN-------------DSILPIGRVEINGISGLTKIVPGNSITSAKGAPDLNDIESSDEETEDG------------------ETSYPRFNPSCRIFELDPCGGFGMVCLVYRNTKPGVPAH-------------------------DPEIWFMDRAYRWHFLADNFTAYFRLMVAHVGLPQWQYAFTDIGLSPFAEQ 215          
BLAST of mRNA_H-paniculata_contig5220.12586.1 vs. uniprot
Match: UPI001E1DADE6 (tubulin polyglutamylase complex subunit 2-like isoform X1 n=2 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1DADE6)

HSP 1 Score: 93.2 bits (230), Expect = 1.850e-18
Identity = 71/240 (29.58%), Postives = 115/240 (47.92%), Query Frame = 0
Query:   19 GVRSINISDSKQAPVAALTVWEDTNYPYRQGKRLPEDLRAFLCTSDGLSLSWTVKLHGKGGEGGGPGGSSDREVVAGRIYVGGVSAITRIPLDADDLRSIKLSSRCVADAIAADAPAXXPGALDLDRDDTTGN-RDAYDLAA--FSIDSACEVGRVALVYGVPRRSPPPRRRGSRSCSGENSRVTSRSAVEAWLVNPEVWIQDLSCRWHFLADSFTSYFRVMAVHLGVLGWQQAFSPVGL 255
            GV  + +   + A   ++  WE  N  +     LPEDL++F  TSDG  L+W VK+        GP       V  GR+Y+  VS + +    A++     L +  +AD + AD+ A          D+T+G  +  +D     F +D     G+V LV+   + +P  ++          S   +    +  +   EVW  D + RWH++ADSFT+Y+R+M +HLG+  WQ AF+ +GL
Sbjct:   27 GVCKLELEPRRPADRPSILAWEQKNTVF-----LPEDLKSFYLTSDGFLLTWCVKIEN------GP-------VPVGRMYLNSVSKMMKFGGPANNT----LVNPSLAD-LDADSDA---------EDETSGTEKPTFDSRCKIFELDPCDGYGKVCLVFKENKTAPEYKKSADIVSKVYTSDYMTYGGTDPKI---EVWFLDRALRWHYIADSFTAYYRLMIMHLGLPQWQYAFTDIGL 231          
BLAST of mRNA_H-paniculata_contig5220.12586.1 vs. uniprot
Match: UPI0018D6FE88 (tubulin polyglutamylase complex subunit 2-like n=1 Tax=Patiria miniata TaxID=46514 RepID=UPI0018D6FE88)

HSP 1 Score: 89.7 bits (221), Expect = 6.470e-18
Identity = 68/244 (27.87%), Postives = 102/244 (41.80%), Query Frame = 0
Query:   19 GVRSINISDSKQAPVAALTVWEDTNYPYRQGKRLPEDLRAFLCTSDGLSLSWTVKLHGKGGEGGGPGGSSDREVVAGRIYVGGVSAITRIPLDADDLRSIKLSSRCVADAIAADAPAXXPGALDLDRDDTTGNRDAYDLAAFSIDSACEVGRVALVYGVPRRSPPPRRRGSRSCSGENSRVTSRSAVEAWLVNPEVWIQDLSCRWHFLADSFTSYFRVMAVHLGVLGWQQAFSPVGLSPITENV 262
            G+  I ++D + A    +  WE  N        LP+DL+ F  TSDGL L+W+V+               D+    GR+ +  +S +T+       L   K  S     ++A    A      D D D             F +D    + +V LVY   R   P +                         +PEVW+ D + RWHFLA +F+ YFR+M +HLG+  WQ A++ VGLSP  + +
Sbjct:   32 GICDITLADLQPAERHQVVSWEQRN-----SCMLPDDLKRFYLTSDGLLLTWSVRFD-------------DQLQSVGRMEINKISNVTK-------LAGNKAPSNANTPSLADVDYASDEEQCDEDTDVPAKPHFDTRSRIFELDPCRGIAKVCLVYRNTRPGSPAQ-------------------------HPEVWLLDRALRWHFLAHTFSQYFRMMLMHLGLPQWQLAYTDVGLSPQAKPI 225          
BLAST of mRNA_H-paniculata_contig5220.12586.1 vs. uniprot
Match: R7V0Q4_CAPTE (SMI1_KNR4 domain-containing protein n=2 Tax=Capitella teleta TaxID=283909 RepID=R7V0Q4_CAPTE)

HSP 1 Score: 89.7 bits (221), Expect = 2.300e-17
Identity = 73/260 (28.08%), Postives = 108/260 (41.54%), Query Frame = 0
Query:    3 RLGFDFLAHLEAMRGKGVRSINISDSKQAPVAALTVWEDTNYPYRQGKRLPEDLRAFLCTSDGLSLSWTVKLHGKGGEGGGPGGSSDREVVAGRIYVGGVSAITRI-PLDADDLRSIKLSSRCVADAIAADAPAXXPGALDLDRDDTTGNRDAYDLAAFSIDSACEVGRVALVYGVPRRSPPPRRRGSRSCSGENSRVTSRSAVEAWLVNPEVWIQDLSCRWHFLADSFTSYFRVMAVHLGVLGWQQAFSPVGLSPITEN 261
            +L F  +  LE  +  GV  + +S+ +    ++L  WE      +    LP+DLR+F  TS+G+ L W VK++             D  +  GR+ V  +  + RI P    D  +  L    + D IA  A     G    D          +    F +D     G+V LVY    +  P +R                          E+W  D S RWH LA++F SY+R+M +HLG+  WQ  F+ VGLSP  E 
Sbjct:   12 KLTFGIMRSLE--KRAGVCDVKLSERQATDRSSLVAWEQ-----KHSCALPDDLRSFYLTSNGMFLKWNVKMN-------------DSRIPVGRLEVNSLDKLIRIGPCTTTDHANPSLF---LLDFIADSADESEKGNPHWD----------HRSRIFELDPCDGYGKVCLVYRNTAQGLPAQR-------------------------SEIWFLDRSLRWHPLAETFLSYYRMMLMHLGLPQWQYGFTAVGLSPQAEQ 213          
BLAST of mRNA_H-paniculata_contig5220.12586.1 vs. uniprot
Match: A0A6J8B8K0_MYTCO (TPGS2 n=4 Tax=Mytilus TaxID=6548 RepID=A0A6J8B8K0_MYTCO)

HSP 1 Score: 88.6 bits (218), Expect = 9.280e-17
Identity = 76/247 (30.77%), Postives = 108/247 (43.72%), Query Frame = 0
Query:   19 GVRSINISDSKQAPVAALTVWEDTNYPYRQGKRLPEDLRAFLCTSDGLSLSWTVKLHGKGGEGGGPGGSSDREVVAGRIYVGGVSAITRIPLDADDLRSIKLSSRCVADAIAADAPAXXPGALDLDRDDTTGNRDAYDLAAFSIDSACEV---------GRVALVYGVPRRSPPPRRRGSRSCSGENSRVTSRSAVEAWLVNPEVWIQDLSCRWHFLADSFTSYFRVMAVHLGVLGWQQAFSPVGLS 256
            GV  I +     A   A+ +WE  N     G  LPED + F  T+DG  L+W VK+        GP          G++Y+  VS +TRI   A ++ S  ++                P  LDL+ D +    +A  L   S DS C++         GRV LV+   R +            G+++    R          EVW  D S RWHFLA+SF +YFR+M +HLG+  WQ   + +GLS
Sbjct:   30 GVCKIELDQRSPADRHAVLMWEQRN-----GCFLPEDFKNFYLTTDGFKLTWNVKMDN------GP-------TPVGKLYINRVSQLTRI---AGNVASSHVN----------------PTLLDLEAD-SDNEDEATGLEKPSFDSRCKIYEMDPCDGYGRVCLVF---RENKTGYIDSQELFDGKHTSELIRFGGND--PKTEVWFLDRSLRWHFLAESFMAYFRLMLMHLGLPQWQYGITDIGLS 233          
BLAST of mRNA_H-paniculata_contig5220.12586.1 vs. uniprot
Match: A0A830HNQ7_9CHLO (Tubulin polyglutamylase complex subunit 2 n=1 Tax=Pycnococcus provasolii TaxID=41880 RepID=A0A830HNQ7_9CHLO)

HSP 1 Score: 87.0 bits (214), Expect = 2.090e-16
Identity = 67/226 (29.65%), Postives = 93/226 (41.15%), Query Frame = 0
Query:   32 PVAALTVWEDTNYPYRQGKRLPEDLRAFLCTSDGLSLSWTVKLHGKGGEGGGPGGSSDREVVAGRIYVGGVSAITRIPLDADDLRSIKLSSRCVADAIAADAPAXXPGALDLDRDDTTGNRDAYDLAAFSIDSACEVGRVALVYGVPRRSPPPRRRGSRSCSGENSRVTSRSAVEAWLVNPEVWIQDLSCRWHFLADSFTSYFRVMAVHLGVLGWQQAFSPVGLSP 257
            P++A+T WE+ + P    K+LP+D +AFL T+DGL + + + L G                             T  P+ A       L    +A+A    APA   G  D D    TG           +D  C  GRVA+VY                   EN             V   V  QD++  WH LA++F+ Y+R+M VHLG+  WQ  F+PVGL P
Sbjct:   31 PLSAITAWEERHAP----KKLPDDFKAFLLTTDGLDVRYDLILRG-----------------------------TAFPVGA-------LCVNALANADVRPAPAPCAGPGDSDERPATGQN----AVCVDLDDTCTCGRVAIVY-------------------ENGDE----------VATHVGFQDIAGVWHKLANTFSQYYRLMVVHLGLPRWQLKFTPVGLDP 183          
BLAST of mRNA_H-paniculata_contig5220.12586.1 vs. uniprot
Match: UPI0018D5AFA2 (tubulin polyglutamylase complex subunit 2-like isoform X1 n=5 Tax=Patiria miniata TaxID=46514 RepID=UPI0018D5AFA2)

HSP 1 Score: 87.4 bits (215), Expect = 2.180e-16
Identity = 67/239 (28.03%), Postives = 99/239 (41.42%), Query Frame = 0
Query:   19 GVRSINISDSKQAPVAALTVWEDTNYPYRQGKRLPEDLRAFLCTSDGLSLSWTVKLHGKGGEGGGPGGSSDREVVAGRIYVGGVSAITRIPLDADDLRSIKLSSRCVADAIAADAPAXXPGALDLDRDDTTGNRDAYDLAAFSIDSACEVGRVALVYGVPRRSPPPRRRGSRSCSGENSRVTSRSAVEAWLVNPEVWIQDLSCRWHFLADSFTSYFRVMAVHLGVLGWQQAFSPVGLSP 257
            G+  I ++D + A    +  WE      R    LP+DL+ F  TSDGL L+W V+               D+    GR+ +  +S +T+       L   K  S     ++A    A      D D D             F +D    + +V LVY   +   P +                         +PEVW+ D + RWHFLA +F+ YFR+M +HLG+  WQ A++ VGLSP
Sbjct:   38 GICDITLADLQPAERHQVVSWEQ-----RSSCMLPDDLKRFYLTSDGLLLTWCVRFD-------------DQLQPVGRMEINKISNVTK-------LAGNKAPSNANTPSLADVDYASDEEQCDEDTDVPAKPHFDTRSRIFELDPCRGIAKVCLVYRNTKPGSPAQ-------------------------HPEVWLLDRALRWHFLAHTFSQYFRMMLMHLGLPQWQLAYTDVGLSP 226          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5220.12586.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KL07_9PHAE1.890e-6946.18SMI1_KNR4 domain-containing protein n=1 Tax=Ectoca... [more]
C1EEH4_MICCC1.510e-2230.95SMI1_KNR4 domain-containing protein n=3 Tax=Microm... [more]
A0A078AC72_STYLE7.920e-2229.71SMI1_KNR4 domain-containing protein n=2 Tax=Oxytri... [more]
A0A8J1Y6S3_OWEFU4.100e-2027.38Ofus.G17786 protein n=1 Tax=Owenia fusiformis TaxI... [more]
UPI001E1DADE61.850e-1829.58tubulin polyglutamylase complex subunit 2-like iso... [more]
UPI0018D6FE886.470e-1827.87tubulin polyglutamylase complex subunit 2-like n=1... [more]
R7V0Q4_CAPTE2.300e-1728.08SMI1_KNR4 domain-containing protein n=2 Tax=Capite... [more]
A0A6J8B8K0_MYTCO9.280e-1730.77TPGS2 n=4 Tax=Mytilus TaxID=6548 RepID=A0A6J8B8K0_... [more]
A0A830HNQ7_9CHLO2.090e-1629.65Tubulin polyglutamylase complex subunit 2 n=1 Tax=... [more]
UPI0018D5AFA22.180e-1628.03tubulin polyglutamylase complex subunit 2-like iso... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR039231Tubulin polyglutamylase complex subunit 2PANTHERPTHR31854FAMILY NOT NAMEDcoord: 6..261
NoneNo IPR availablePRODOMPD318037coord: 52..257
e-value: 4.0E-12
score: 173.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5220contigH-paniculata_contig5220:1339..4672 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5220.12586.1mRNA_H-paniculata_contig5220.12586.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig5220 1339..4696 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig5220.12586.1 ID=prot_H-paniculata_contig5220.12586.1|Name=mRNA_H-paniculata_contig5220.12586.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=266bp
MGRLGFDFLAHLEAMRGKGVRSINISDSKQAPVAALTVWEDTNYPYRQGK
RLPEDLRAFLCTSDGLSLSWTVKLHGKGGEGGGPGGSSDREVVAGRIYVG
GVSAITRIPLDADDLRSIKLSSRCVADAIAADAPAPAPGALDLDRDDTTG
NRDAYDLAAFSIDSACEVGRVALVYGVPRRSPPPRRRGSRSCSGENSRVT
SRSAVEAWLVNPEVWIQDLSCRWHFLADSFTSYFRVMAVHLGVLGWQQAF
SPVGLSPITENVRLC*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039231TPGS2