prot_H-paniculata_contig5218.12581.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig5218.12581.1
Unique Nameprot_H-paniculata_contig5218.12581.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length48
Homology
BLAST of mRNA_H-paniculata_contig5218.12581.1 vs. uniprot
Match: D8LM73_ECTSI (MCM domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM73_ECTSI)

HSP 1 Score: 52.8 bits (125), Expect = 1.050e-6
Identity = 28/30 (93.33%), Postives = 28/30 (93.33%), Query Frame = 0
Query:    1 MEQQALSVAKAGLVCKLNARTTVFAVTKTK 30
            MEQQ LSVAKAGLVCKLNARTTVFAVT TK
Sbjct:  438 MEQQTLSVAKAGLVCKLNARTTVFAVTNTK 467          
BLAST of mRNA_H-paniculata_contig5218.12581.1 vs. uniprot
Match: A0A6H5JX13_9PHAE (MCM domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JX13_9PHAE)

HSP 1 Score: 51.2 bits (121), Expect = 3.650e-6
Identity = 27/30 (90.00%), Postives = 27/30 (90.00%), Query Frame = 0
Query:    1 MEQQALSVAKAGLVCKLNARTTVFAVTKTK 30
            MEQQ LSVAKAGLVCKLNARTT FAVT TK
Sbjct:   51 MEQQTLSVAKAGLVCKLNARTTAFAVTNTK 80          
BLAST of mRNA_H-paniculata_contig5218.12581.1 vs. uniprot
Match: A0A6H5K1D8_9PHAE (MCM domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1D8_9PHAE)

HSP 1 Score: 51.2 bits (121), Expect = 3.660e-6
Identity = 27/30 (90.00%), Postives = 27/30 (90.00%), Query Frame = 0
Query:    1 MEQQALSVAKAGLVCKLNARTTVFAVTKTK 30
            MEQQ LSVAKAGLVCKLNARTT FAVT TK
Sbjct:   51 MEQQTLSVAKAGLVCKLNARTTAFAVTNTK 80          
BLAST of mRNA_H-paniculata_contig5218.12581.1 vs. uniprot
Match: D0N2F2_PHYIT (DNA replication licensing factor MCM9 n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0N2F2_PHYIT)

HSP 1 Score: 50.4 bits (119), Expect = 6.850e-6
Identity = 31/47 (65.96%), Postives = 34/47 (72.34%), Query Frame = 0
Query:    1 MEQQALSVAKAGLVCKLNARTTVFAVTKTKDAV--VSVICVETSLHS 45
            MEQQ LSVAKAGLVCKLNARTT+FAVT  K      S + V TS+ S
Sbjct:  596 MEQQTLSVAKAGLVCKLNARTTIFAVTNPKGRYDPTSDVSVNTSIAS 642          
BLAST of mRNA_H-paniculata_contig5218.12581.1 vs. uniprot
Match: A0A421FE45_9STRA (MCM domain-containing protein (Fragment) n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A421FE45_9STRA)

HSP 1 Score: 50.1 bits (118), Expect = 9.360e-6
Identity = 26/30 (86.67%), Postives = 27/30 (90.00%), Query Frame = 0
Query:    1 MEQQALSVAKAGLVCKLNARTTVFAVTKTK 30
            MEQQ LSVAKAGLVCKLNARTT+FAVT  K
Sbjct:  304 MEQQTLSVAKAGLVCKLNARTTIFAVTNPK 333          
BLAST of mRNA_H-paniculata_contig5218.12581.1 vs. uniprot
Match: A0A3R7NH50_9STRA (MCM domain-containing protein n=1 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7NH50_9STRA)

HSP 1 Score: 50.1 bits (118), Expect = 9.370e-6
Identity = 26/30 (86.67%), Postives = 27/30 (90.00%), Query Frame = 0
Query:    1 MEQQALSVAKAGLVCKLNARTTVFAVTKTK 30
            MEQQ LSVAKAGLVCKLNARTT+FAVT  K
Sbjct:  475 MEQQTLSVAKAGLVCKLNARTTIFAVTNPK 504          
BLAST of mRNA_H-paniculata_contig5218.12581.1 vs. uniprot
Match: K3WF99_GLOUD (MCM domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WF99_GLOUD)

HSP 1 Score: 50.1 bits (118), Expect = 9.370e-6
Identity = 26/30 (86.67%), Postives = 27/30 (90.00%), Query Frame = 0
Query:    1 MEQQALSVAKAGLVCKLNARTTVFAVTKTK 30
            MEQQ LSVAKAGLVCKLNARTT+FAVT  K
Sbjct:  488 MEQQTLSVAKAGLVCKLNARTTIFAVTNPK 517          
BLAST of mRNA_H-paniculata_contig5218.12581.1 vs. uniprot
Match: A0A662XSS9_9STRA (MCM domain-containing protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XSS9_9STRA)

HSP 1 Score: 50.1 bits (118), Expect = 9.370e-6
Identity = 26/30 (86.67%), Postives = 27/30 (90.00%), Query Frame = 0
Query:    1 MEQQALSVAKAGLVCKLNARTTVFAVTKTK 30
            MEQQ LSVAKAGLVCKLNARTT+FAVT  K
Sbjct:  283 MEQQTLSVAKAGLVCKLNARTTIFAVTNPK 312          
BLAST of mRNA_H-paniculata_contig5218.12581.1 vs. uniprot
Match: A0A0P1B2I4_PLAHL (Dna replication licensing factor mcm9 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1B2I4_PLAHL)

HSP 1 Score: 50.1 bits (118), Expect = 9.370e-6
Identity = 26/30 (86.67%), Postives = 27/30 (90.00%), Query Frame = 0
Query:    1 MEQQALSVAKAGLVCKLNARTTVFAVTKTK 30
            MEQQ LSVAKAGLVCKLNARTT+FAVT  K
Sbjct:  446 MEQQTLSVAKAGLVCKLNARTTIFAVTNPK 475          
BLAST of mRNA_H-paniculata_contig5218.12581.1 vs. uniprot
Match: A0A2P4Y5F4_9STRA (DNA replication licensing factor MCM9 n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4Y5F4_9STRA)

HSP 1 Score: 50.1 bits (118), Expect = 9.370e-6
Identity = 26/30 (86.67%), Postives = 27/30 (90.00%), Query Frame = 0
Query:    1 MEQQALSVAKAGLVCKLNARTTVFAVTKTK 30
            MEQQ LSVAKAGLVCKLNARTT+FAVT  K
Sbjct:  669 MEQQTLSVAKAGLVCKLNARTTIFAVTNPK 698          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5218.12581.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LM73_ECTSI1.050e-693.33MCM domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5JX13_9PHAE3.650e-690.00MCM domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5K1D8_9PHAE3.660e-690.00MCM domain-containing protein n=1 Tax=Ectocarpus s... [more]
D0N2F2_PHYIT6.850e-665.96DNA replication licensing factor MCM9 n=2 Tax=Phyt... [more]
A0A421FE45_9STRA9.360e-686.67MCM domain-containing protein (Fragment) n=3 Tax=P... [more]
A0A3R7NH50_9STRA9.370e-686.67MCM domain-containing protein n=1 Tax=Phytophthora... [more]
K3WF99_GLOUD9.370e-686.67MCM domain-containing protein n=1 Tax=Globisporang... [more]
A0A662XSS9_9STRA9.370e-686.67MCM domain-containing protein n=1 Tax=Nothophytoph... [more]
A0A0P1B2I4_PLAHL9.370e-686.67Dna replication licensing factor mcm9 n=1 Tax=Plas... [more]
A0A2P4Y5F4_9STRA9.370e-686.67DNA replication licensing factor MCM9 n=1 Tax=Phyt... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001208MCM domainPFAMPF00493MCMcoord: 1..30
e-value: 1.5E-7
score: 30.8
NoneNo IPR availableGENE3D3.40.50.300coord: 1..40
e-value: 3.2E-6
score: 28.5
NoneNo IPR availablePANTHERPTHR11630:SF48DNA HELICASE MCM9coord: 1..30
IPR031327Mini-chromosome maintenance proteinPANTHERPTHR11630DNA REPLICATION LICENSING FACTORcoord: 1..30

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5218contigH-paniculata_contig5218:3625..7720 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5218.12581.1mRNA_H-paniculata_contig5218.12581.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig5218 3287..7749 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig5218.12581.1 ID=prot_H-paniculata_contig5218.12581.1|Name=mRNA_H-paniculata_contig5218.12581.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=48bp
MEQQALSVAKAGLVCKLNARTTVFAVTKTKDAVVSVICVETSLHSTA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001208MCM_dom
IPR031327MCM