mRNA_H-paniculata_contig5215.12580.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig5215.12580.1 vs. uniprot
Match: D7FPJ3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPJ3_ECTSI) HSP 1 Score: 387 bits (993), Expect = 5.560e-126 Identity = 196/219 (89.50%), Postives = 209/219 (95.43%), Query Frame = 1
Query: 1 NKAVEFSKLQICVDLFLFSAQYTDVATLANLSKFSAGQLFYYPAFSSLRDGEKFNADLTRVLTRATAFEAVMRVRATRGLRITNFYGNYFIRGTDLLALPNCTPDSVFAVEFGYDEQLLTASVISVQAALLYTTSCGERRIRVHNLAIPVEAVIQNVFESVNIDVLCNILAKQALEVALKSGLDTARGRIQQACVDIIRASRGGGYGSSPYMATGAQQQ 657
NKAVEFSKLQICVDLFLFS+ Y+DVATL NL KF+AGQLFYYPAF++ DG KFNA+LTRVLTRATAFEAVMRVRATRGLRITNFYGNYFIRGTDLLALPNCTPDSVFAVEFGYDEQLLTASV+SVQAALLYTTSCGERRIRVHNLAIPVE V+QNVF+SV+IDVLCNILAKQALEV+LKSGLD+AR +IQQ CVDIIRASRGGGYGSSPYMA GAQQQ
Sbjct: 481 NKAVEFSKLQICVDLFLFSSGYSDVATLVNLPKFTAGQLFYYPAFNAQSDGVKFNAELTRVLTRATAFEAVMRVRATRGLRITNFYGNYFIRGTDLLALPNCTPDSVFAVEFGYDEQLLTASVVSVQAALLYTTSCGERRIRVHNLAIPVETVVQNVFDSVSIDVLCNILAKQALEVSLKSGLDSARSKIQQTCVDIIRASRGGGYGSSPYMAAGAQQQ 699
BLAST of mRNA_H-paniculata_contig5215.12580.1 vs. uniprot
Match: A0A836CAX8_9STRA (Sec23/Sec24 trunk domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAX8_9STRA) HSP 1 Score: 315 bits (807), Expect = 7.690e-99 Identity = 163/219 (74.43%), Postives = 182/219 (83.11%), Query Frame = 1
Query: 1 NKAVEFSKLQICVDLFLFSAQYTDVATLANLSKFSAGQLFYYPAFSSLRDGEKFNADLTRVLTRATAFEAVMRVRATRGLRITNFYGNYFIRGTDLLALPNCTPDSVFAVEFGYDEQLLTASVISVQAALLYTTSCGERRIRVHNLAIPVEAVIQNVFESVNIDVLCNILAKQALEVALKSGLDTARGRIQQACVDIIRASRGGGYGSSPYMATGAQQQ 657
NKA +FSKLQICVDLFL AQY DVATL L + GQLFYYP F+ RDG K A+LTRVLTRATAFEAVMRVRATRGLR++NFYGNYFIRGTDLLALPNCTPDSVF VEF YDEQ+L ASVIS+QAALLYTTS GERRIRVHN+A+PV+ V Q +F SV+ID LCN++AKQAL+VAL SGLD AR RIQ CV+I+RA+RGGGYG GAQQQ
Sbjct: 441 NKAQDFSKLQICVDLFLCGAQYMDVATLFQLPSKTGGQLFYYPGFNVQRDGVKLQAELTRVLTRATAFEAVMRVRATRGLRMSNFYGNYFIRGTDLLALPNCTPDSVFGVEFAYDEQVLVASVISIQAALLYTTSTGERRIRVHNVALPVKTVCQEIFNSVSIDALCNLVAKQALDVALTSGLDAARARIQDVCVEILRATRGGGYGGYG----GAQQQ 655
BLAST of mRNA_H-paniculata_contig5215.12580.1 vs. uniprot
Match: A0A7S2V2R8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V2R8_9STRA) HSP 1 Score: 299 bits (765), Expect = 1.180e-97 Identity = 155/219 (70.78%), Postives = 181/219 (82.65%), Query Frame = 1
Query: 1 NKAVEFSKLQICVDLFLFSAQYTDVATLANLSKFSAGQLFYYPAFSSLRDGEKFNADLTRVLTRATAFEAVMRVRATRGLRITNFYGNYFIRGTDLLALPNCTPDSVFAVEFGYDEQLLTASVISVQAALLYTTSCGERRIRVHNLAIPVEAVIQNVFESVNIDVLCNILAKQALEVALKSGLDTARGRIQQACVDIIRASRGGGYGSSPYMATGAQQQ 657
KA+EFS+ QICVDLFLFS YTDVATL+ L K++AG+ ++YP FSS RDGEKF +LTRVLT+ AFEAVMRVRATRGLRITNFYGNYF+RGTDLLALPNCTPD+ F +EF Y+EQLLTA +IS+QAALLYT+S GERRIRVHNLAIPV VIQ V SV IDV+ N+LAK ALEVA K+G D AR RIQQAC+D++RA+R G G+ Y G+QQQ
Sbjct: 44 TKAIEFSRYQICVDLFLFSEHYTDVATLSQLPKYTAGRCYHYPRFSSQRDGEKFVTELTRVLTQPIAFEAVMRVRATRGLRITNFYGNYFVRGTDLLALPNCTPDTCFGIEFAYEEQLLTAQIISIQAALLYTSSSGERRIRVHNLAIPVSQVIQEVVNSVAIDVVINVLAKSALEVAWKTGFDHARTRIQQACLDMVRANRVGA-GAGAY---GSQQQ 258
BLAST of mRNA_H-paniculata_contig5215.12580.1 vs. uniprot
Match: A0A7S4D505_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D505_HETAK) HSP 1 Score: 280 bits (717), Expect = 4.230e-87 Identity = 145/218 (66.51%), Postives = 173/218 (79.36%), Query Frame = 1
Query: 1 NKAVEFSKLQICVDLFLFSAQYTDVATLANLSKFSAGQLFYYPAFSSLRDGEKFNADLTRVLTRATAFEAVMRVRATRGLRITNFYGNYFIRGTDLLALPNCTPDSVFAVEFGYDEQLLTASVISVQAALLYTTSCGERRIRVHNLAIPVEAVIQNVFESVNIDVLCNILAKQALEVALKSGLDTARGRIQQACVDIIRASRGGGYGSSPYMATGAQQ 654
KAVEFS+LQI V+LFLF+AQY D+A L +L K++AG+ +YYPAF RDG + +A+L R LTR FEAVMRVRATRGLRITNFYGNYFIRG+DLLALPNC+P+ +A+E Y+EQL+TA VISVQAALLYT+S GERRIRVHNLA+PV +IQ S+NIDVLCNI+AKQAL+VA K+GLD AR RI Q DI+RA RGGG + Y AQQ
Sbjct: 290 TKAVEFSRLQITVELFLFAAQYADLAALQDLPKYTAGRTYYYPAFRPPRDGARLDAELARCLTRPVVFEAVMRVRATRGLRITNFYGNYFIRGSDLLALPNCSPEHAYALELAYEEQLMTAQVISVQAALLYTSSNGERRIRVHNLAVPVTTIIQEYINSINIDVLCNIMAKQALDVATKTGLDFARTRIFQNAADILRACRGGG-AQAAYGVQQAQQ 506
BLAST of mRNA_H-paniculata_contig5215.12580.1 vs. uniprot
Match: A0A812VPB2_SYMMI (Hypothetical protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812VPB2_SYMMI) HSP 1 Score: 261 bits (667), Expect = 8.450e-80 Identity = 134/221 (60.63%), Postives = 164/221 (74.21%), Query Frame = 1
Query: 1 NKAVEFSKLQICVDLFLFSAQYTDVATLANLSKFSAGQLFYYPAFSSLRDGEKFNADLTRVLTRATAFEAVMRVRATRGLRITNFYGNYFIRGTDLLALPNCTPDSVFAVEFGYDEQLLTASVISVQAALLYTTSCGERRIRVHNLAIPVEAVIQNVFESVNIDVLCNILAKQALEVALKSGLDTARGRIQQACVDIIRASRGGGYGSS---PYMATGAQQ 654
N A+EFS+LQICVD FLFS QYTDVAT + LSK++AG +YYP F RDGEKF A+L R LTRA+AFEAVMRVRATRGLRI NFYG++FIRGTDLLALPNCT DSV+ ++F YDE L+ + ++VQAALLYT S GERRIRVH + IPV + + +ID NI AKQA++ +LK GLD +R R+ Q CV+I+RA++ G S Y A G QQ
Sbjct: 365 NTAIEFSRLQICVDTFLFSGQYTDVATFSTLSKYTAGSTYYYPGFYGPRDGEKFEAELHRTLTRASAFEAVMRVRATRGLRIQNFYGSFFIRGTDLLALPNCTSDSVYTMDFAYDEPALSTTAVTVQAALLYTNSAGERRIRVHTMVIPVTQHLSEMLSLTDIDCAVNIAAKQAVDSSLKGGLDASRTRVHQNCVEILRAAKSGVQQSQMPGQYGAVGYQQ 585
BLAST of mRNA_H-paniculata_contig5215.12580.1 vs. uniprot
Match: M4BN79_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BN79_HYAAE) HSP 1 Score: 254 bits (648), Expect = 1.550e-79 Identity = 126/209 (60.29%), Postives = 160/209 (76.56%), Query Frame = 1
Query: 1 NKAVEFSKLQICVDLFLFSAQYTDVATLANLSKFSAGQLFYYPAFSSLRDGEKFNADLTRVLTRATAFEAVMRVRATRGLRITNFYGNYFIRGTDLLALPNCTPDSVFAVEFGYDEQLLTASVISVQAALLYTTSCGERRIRVHNLAIPVEAVIQNVFESVNIDVLCNILAKQALEVALKSGLDTARGRIQQACVDIIRASRGGG-YGS 624
A++F + Q+ VDLFLFS+ YTD+A++ +LSK+SAGQ++YYPAF++ RDGEKF+ +L L R TA+EAVMRVR T+G+R+ NFYGN+F+RG DLLALP C DS FAVE + + LLT+S ISVQA LLYT S GERRIRVH + IPV + +F V+ D LCNI+AK ALEVALK+GLD+ R R+Q CVDIIRA R G YG+
Sbjct: 11 TNAIDFCRQQVSVDLFLFSSMYTDIASMGSLSKYSAGQVYYYPAFNAKRDGEKFSKELAHCLVRETAWEAVMRVRCTKGMRLANFYGNFFLRGPDLLALPTCNADSTFAVEITHSDALLTSSTISVQAGLLYTNSGGERRIRVHTVCIPVTKLFAELFRQVDQDALCNIMAKNALEVALKTGLDSGRSRLQAQCVDIIRAYRNSGTYGA 219
BLAST of mRNA_H-paniculata_contig5215.12580.1 vs. uniprot
Match: A0A662XXV8_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XXV8_9STRA) HSP 1 Score: 248 bits (634), Expect = 2.070e-77 Identity = 122/209 (58.37%), Postives = 158/209 (75.60%), Query Frame = 1
Query: 1 NKAVEFSKLQICVDLFLFSAQYTDVATLANLSKFSAGQLFYYPAFSSLRDGEKFNADLTRVLTRATAFEAVMRVRATRGLRITNFYGNYFIRGTDLLALPNCTPDSVFAVEFGYDEQLLTASVISVQAALLYTTSCGERRIRVHNLAIPVEAVIQNVFESVNIDVLCNILAKQALEVALKSGLDTARGRIQQACVDIIRASRGGG-YGS 624
A++F + Q+ VD+FLFS+ YTDVA++ +LSK+SAGQ++YYPAF++ RDGEKF+ +L L R T++EAVMRVR T+G+R+ NFYGN+F+RG DLLALP C DS FAVE + + LLT+S ISVQA LLYT S GERRIRVH + IPV + +F V+ D LCNI+AK ALE ALK+GLD+ R R+Q C DI+RA R G YG+
Sbjct: 10 TNAIDFCRQQVSVDMFLFSSMYTDVASIGSLSKYSAGQVYYYPAFNAERDGEKFSRELAHCLVRETSWEAVMRVRCTKGMRLANFYGNFFLRGPDLLALPTCNADSTFAVELTHSDALLTSSTISVQAGLLYTNSGGERRIRVHTVCIPVTKLFAELFRQVDQDALCNIMAKSALETALKTGLDSGRSRLQAQCADIVRAYRNSGAYGA 218
BLAST of mRNA_H-paniculata_contig5215.12580.1 vs. uniprot
Match: A0A024TUF0_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TUF0_9STRA) HSP 1 Score: 260 bits (664), Expect = 3.040e-77 Identity = 130/220 (59.09%), Postives = 166/220 (75.45%), Query Frame = 1
Query: 1 NKAVEFSKLQICVDLFLFSAQYTDVATLANLSKFSAGQLFYYPAFSSLRDGEKFNADLTRVLTRATAFEAVMRVRATRGLRITNFYGNYFIRGTDLLALPNCTPDSVFAVEFGYDEQLLTASVISVQAALLYTTSCGERRIRVHNLAIPVEAVIQNVFESVNIDVLCNILAKQALEVALKSGLDTARGRIQQACVDIIRASR-GGGYGSSPYMATGAQQQ 657
A+EF + Q+ VD FLFS QYTD A+L +SK+SAGQ+FYYP F++ +DG+KF A+L LTR T +EAVMRVR T+G+R+ NFYGN F+RG DLLALPNC D+ FA+E + + LLTASVIS+QAALLYTTSCGERRIRV +A+PV + VF SV++D +CN++AK ALEVALK+GL+ AR ++QQ CVDI RA R G YG + +G Q Q
Sbjct: 606 KNAIEFCRQQVSVDTFLFSPQYTDYASLGAMSKYSAGQVFYYPGFTAAKDGDKFRAELAHTLTRETGWEAVMRVRCTKGMRLVNFYGNSFLRGPDLLALPNCHADAAFAIEIEHQDALLTASVISIQAALLYTTSCGERRIRVLTVAVPVTKLFAEVFRSVDVDAICNMIAKNALEVALKTGLEPARNKMQQVCVDIARAYRTSGAYGQNNPSNSGFQLQ 825
BLAST of mRNA_H-paniculata_contig5215.12580.1 vs. uniprot
Match: W4GMY2_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GMY2_9STRA) HSP 1 Score: 258 bits (660), Expect = 1.090e-76 Identity = 132/221 (59.73%), Postives = 168/221 (76.02%), Query Frame = 1
Query: 1 NKAVEFSKLQICVDLFLFSAQYTDVATLANLSKFSAGQLFYYPAFSSLRDGEKFNADLTRVLTRATAFEAVMRVRATRGLRITNFYGNYFIRGTDLLALPNCTPDSVFAVEFGYDEQLLTASVISVQAALLYTTSCGERRIRVHNLAIPVEAVIQNVFESVNIDVLCNILAKQALEVALKSGLDTARGRIQQACVDIIRASR-GGGYG-SSPYMATGAQQQ 657
A+EF + Q+ VD FLFS QYTD A+L +SK+SAGQ+F+YP F + +DG+KF+A+L LTR T +E+VMRVR T+G+R+ NFYGN F+RG DLLALPNC D+ FA+E + + LLTASVIS+QAALLYTTSCGERRIRV +AIPV + VF SV++D +CN++AK ALEVALKSGL+TAR ++Q CVDI RA R G YG ++P TG Q Q
Sbjct: 602 KNAIEFCRQQVSVDTFLFSPQYTDYASLGAMSKYSAGQVFHYPGFVAAKDGDKFSAELAHTLTRETGWESVMRVRCTKGMRLVNFYGNSFLRGPDLLALPNCHADAAFAIEIEHQDALLTASVISIQAALLYTTSCGERRIRVLTVAIPVTKLFAEVFRSVDVDAICNMIAKNALEVALKSGLETARNKMQTVCVDIARAYRTSGAYGHNNPTNNTGYQLQ 822
BLAST of mRNA_H-paniculata_contig5215.12580.1 vs. uniprot
Match: A0A1W0A274_9STRA (Transporter Sec24 (Fragment) n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A274_9STRA) HSP 1 Score: 254 bits (648), Expect = 2.130e-76 Identity = 128/220 (58.18%), Postives = 168/220 (76.36%), Query Frame = 1
Query: 1 NKAVEFSKLQICVDLFLFSAQYTDVATLANLSKFSAGQLFYYPAFSSLRDGEKFNADLTRVLTRATAFEAVMRVRATRGLRITNFYGNYFIRGTDLLALPNCTPDSVFAVEFGYDEQLLTASVISVQAALLYTTSCGERRIRVHNLAIPVEAVIQNVFESVNIDVLCNILAKQALEVALKSGLDTARGRIQQACVDIIRASR-GGGYGSSPYMATGAQQQ 657
A+EF + Q+ VD FLFS QYTD A+L LSK+SAG++F+YP FS+ +DGEKF+ +L LTR T +EAVMRVR T+G+R++NFYGN F+RG DLLALPNC D+ +A+E +++ LLTASVI VQ+ALLYTTSCGERRIRVH +A+PV + VF SV++D +CN++AK ALEVALK+GL+ AR ++Q DI RA R G YG++P +TG Q Q
Sbjct: 346 KNAIEFCRQQVSVDTFLFSPQYTDFASLGCLSKYSAGEVFFYPGFSAAKDGEKFSNELAHCLTRETGWEAVMRVRVTKGMRLSNFYGNSFLRGPDLLALPNCHRDAAYAIEIEHNDALLTASVICVQSALLYTTSCGERRIRVHTVAVPVTKLFAEVFRSVDVDAMCNLIAKNALEVALKTGLNAARNKLQAVASDIARAYRTSGAYGANP--STGYQLQ 563 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5215.12580.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig5215.12580.1 >prot_H-paniculata_contig5215.12580.1 ID=prot_H-paniculata_contig5215.12580.1|Name=mRNA_H-paniculata_contig5215.12580.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=219bp NKAVEFSKLQICVDLFLFSAQYTDVATLANLSKFSAGQLFYYPAFSSLRDback to top mRNA from alignment at H-paniculata_contig5215:9865..14133+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig5215.12580.1 ID=mRNA_H-paniculata_contig5215.12580.1|Name=mRNA_H-paniculata_contig5215.12580.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4269bp|location=Sequence derived from alignment at H-paniculata_contig5215:9865..14133+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig5215:9865..14133+ >mRNA_H-paniculata_contig5215.12580.1 ID=mRNA_H-paniculata_contig5215.12580.1|Name=mRNA_H-paniculata_contig5215.12580.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1314bp|location=Sequence derived from alignment at H-paniculata_contig5215:9865..14133+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |