prot_H-paniculata_contig5208.12568.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig5208.12568.1
Unique Nameprot_H-paniculata_contig5208.12568.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length407
Homology
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BLAST of mRNA_H-paniculata_contig5208.12568.1 vs. uniprot
Match: D8LKM5_ECTSI (Zinc finger transcriptional regulator n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKM5_ECTSI)

HSP 1 Score: 80.5 bits (197), Expect = 8.590e-13
Identity = 36/46 (78.26%), Postives = 39/46 (84.78%), Query Frame = 0 
Query:    1 MKRGCDGGTPCELCKRRKKFCVRSVKKRSGPAKGTKYCKRRARKSP 46
            MKRGC GGTPC LC RR K C+RS+KKRSGPAKGTKYCKR+ RK P
Sbjct:   33 MKRGCSGGTPCALCNRRNKNCIRSIKKRSGPAKGTKYCKRKPRKIP 78
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BLAST of mRNA_H-paniculata_contig5208.12568.1 vs. uniprot
Match: A0A6H5L7F3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7F3_9PHAE)

HSP 1 Score: 63.9 bits (154), Expect = 2.350e-7
Identity = 28/43 (65.12%), Postives = 35/43 (81.40%), Query Frame = 0 
Query:    1 MKRGCDGGTPCELCKRRKKFCVRSVKKRSGPAKGTKYCKRRAR 43
            +KR CDG +PC+LC RR++ C RSVK++SGPAKGTKY  RR R
Sbjct:   44 LKRACDGQSPCQLCLRRRETCTRSVKRKSGPAKGTKYTTRRVR 86
[Close]
BLAST of mRNA_H-paniculata_contig5208.12568.1 vs. uniprot
Match: D8LPZ9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPZ9_ECTSI)

HSP 1 Score: 63.2 bits (152), Expect = 5.090e-7
Identity = 28/43 (65.12%), Postives = 34/43 (79.07%), Query Frame = 0 
Query:    1 MKRGCDGGTPCELCKRRKKFCVRSVKKRSGPAKGTKYCKRRAR 43
            +KR CDG  PC LC RR++ C RSVK++SGPAKGTKY  RR+R
Sbjct:   72 LKRACDGKNPCHLCLRRRETCTRSVKRKSGPAKGTKYTTRRSR 114
[Close]
BLAST of mRNA_H-paniculata_contig5208.12568.1 vs. uniprot
Match: A0A6H5L009_9PHAE (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L009_9PHAE)

HSP 1 Score: 61.2 bits (147), Expect = 2.060e-6
Identity = 28/43 (65.12%), Postives = 31/43 (72.09%), Query Frame = 0 
Query:    1 MKRGCDGGTPCELCKRRKKFCVRSVKKRSGPAKGTKYCKRRAR 43
            +KR CDG  PC LC RR K C RS +K+SGPAKGTKY  RR R
Sbjct:   20 LKRACDGKNPCSLCARRHKPCTRSARKKSGPAKGTKYAPRRKR 62
[Close]
BLAST of mRNA_H-paniculata_contig5208.12568.1 vs. uniprot
Match: D7FPF9_ECTSI (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPF9_ECTSI)

HSP 1 Score: 61.2 bits (147), Expect = 2.070e-6
Identity = 28/43 (65.12%), Postives = 31/43 (72.09%), Query Frame = 0 
Query:    1 MKRGCDGGTPCELCKRRKKFCVRSVKKRSGPAKGTKYCKRRAR 43
            +KR CDG  PC LC RR K C RS +K+SGPAKGTKY  RR R
Sbjct:   28 LKRACDGKNPCSLCARRHKPCTRSARKKSGPAKGTKYAPRRKR 70
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5208.12568.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D8LKM5_ECTSI8.590e-1378.26Zinc finger transcriptional regulator n=1 Tax=Ecto... [more]
A0A6H5L7F3_9PHAE2.350e-765.12Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LPZ9_ECTSI5.090e-765.12Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L009_9PHAE2.060e-665.12Zn(2)-C6 fungal-type domain-containing protein n=1... [more]
D7FPF9_ECTSI2.070e-665.12Zn(2)-C6 fungal-type domain-containing protein n=1... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5208contigH-paniculata_contig5208:381..6779 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5208.12568.1mRNA_H-paniculata_contig5208.12568.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig5208 327..7791 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig5208.12568.1 ID=prot_H-paniculata_contig5208.12568.1|Name=mRNA_H-paniculata_contig5208.12568.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=407bp
MKRGCDGGTPCELCKRRKKFCVRSVKKRSGPAKGTKYCKRRARKSPPEDS
ASPPAKAPPTTSPAGAKESVRRQTDRKTPSIQSPSVTNAPVLDPVSAKVK
RTLTTKPQPRAGNKASFPTPTAPSTSVVQCDVKKPKDVKEEKSCEEEPAA
PAVAHAVQASQEGWTDRSLHVDSHTSSNSHCESMPPFLSLGQTGDCAATS
TSAPSSHDYGLGSRNSKQELPASPRQPGSIQNVGLQGWTAAWHSGLSHCM
GSSTVACSQNTMRLVGARRGSLEEALYGSLDKRPSYASWIDIQDLDMDMK
TLSSLRWAHHGTTRDNATPWTDASGGNGAEIGASRSSLSSELMHPASDNS
CSADQGSHGFTVGARPTGGPAAATATLDDQSSLRDLLLEKWPPVPVSEVS
LAEGTW*
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