mRNA_H-paniculata_contig5208.12568.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig5208.12568.1
Unique NamemRNA_H-paniculata_contig5208.12568.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig5208.12568.1 vs. uniprot
Match: D8LKM5_ECTSI (Zinc finger transcriptional regulator n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKM5_ECTSI)

HSP 1 Score: 101 bits (251), Expect = 6.330e-19
Identity = 45/56 (80.36%), Postives = 49/56 (87.50%), Query Frame = 1 
Query:   25 LRKSCDYCVKMKRGCDGGTPCELCKRRKKFCVRSVKKRSGPAKGTKYCKRRARKSP 192
            LRKSCDYCV+MKRGC GGTPC LC RR K C+RS+KKRSGPAKGTKYCKR+ RK P
Sbjct:   23 LRKSCDYCVRMKRGCSGGTPCALCNRRNKNCIRSIKKRSGPAKGTKYCKRKPRKIP 78
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BLAST of mRNA_H-paniculata_contig5208.12568.1 vs. uniprot
Match: D8LPZ9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPZ9_ECTSI)

HSP 1 Score: 82.8 bits (203), Expect = 1.340e-12
Identity = 39/61 (63.93%), Postives = 47/61 (77.05%), Query Frame = 1 
Query:    1 QQEDEEPQLRKSCDYCVKMKRGCDGGTPCELCKRRKKFCVRSVKKRSGPAKGTKYCKRRAR 183
            QQ+D    LRKSCD CV++KR CDG  PC LC RR++ C RSVK++SGPAKGTKY  RR+R
Sbjct:   54 QQDDGRVLLRKSCDLCVRLKRACDGKNPCHLCLRRRETCTRSVKRKSGPAKGTKYTTRRSR 114
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BLAST of mRNA_H-paniculata_contig5208.12568.1 vs. uniprot
Match: A0A6H5L009_9PHAE (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L009_9PHAE)

HSP 1 Score: 82.4 bits (202), Expect = 1.740e-12
Identity = 37/54 (68.52%), Postives = 42/54 (77.78%), Query Frame = 1 
Query:   22 QLRKSCDYCVKMKRGCDGGTPCELCKRRKKFCVRSVKKRSGPAKGTKYCKRRAR 183
            +LRKSCDYCV++KR CDG  PC LC RR K C RS +K+SGPAKGTKY  RR R
Sbjct:    9 ELRKSCDYCVRLKRACDGKNPCSLCARRHKPCTRSARKKSGPAKGTKYAPRRKR 62
[Close]
BLAST of mRNA_H-paniculata_contig5208.12568.1 vs. uniprot
Match: D7FPF9_ECTSI (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPF9_ECTSI)

HSP 1 Score: 82.4 bits (202), Expect = 1.750e-12
Identity = 37/54 (68.52%), Postives = 42/54 (77.78%), Query Frame = 1 
Query:   22 QLRKSCDYCVKMKRGCDGGTPCELCKRRKKFCVRSVKKRSGPAKGTKYCKRRAR 183
            +LRKSCDYCV++KR CDG  PC LC RR K C RS +K+SGPAKGTKY  RR R
Sbjct:   17 ELRKSCDYCVRLKRACDGKNPCSLCARRHKPCTRSARKKSGPAKGTKYAPRRKR 70
[Close]
BLAST of mRNA_H-paniculata_contig5208.12568.1 vs. uniprot
Match: A0A6H5L7F3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7F3_9PHAE)

HSP 1 Score: 81.6 bits (200), Expect = 2.010e-12
Identity = 36/53 (67.92%), Postives = 44/53 (83.02%), Query Frame = 1 
Query:   25 LRKSCDYCVKMKRGCDGGTPCELCKRRKKFCVRSVKKRSGPAKGTKYCKRRAR 183
            LRKSCD CV++KR CDG +PC+LC RR++ C RSVK++SGPAKGTKY  RR R
Sbjct:   34 LRKSCDLCVRLKRACDGQSPCQLCLRRRETCTRSVKRKSGPAKGTKYTTRRVR 86
[Close]
BLAST of mRNA_H-paniculata_contig5208.12568.1 vs. uniprot
Match: A0A835Z8Y1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8Y1_9STRA)

HSP 1 Score: 66.2 bits (160), Expect = 1.900e-7
Identity = 29/49 (59.18%), Postives = 38/49 (77.55%), Query Frame = 1 
Query:   19 PQLRKSCDYCVKMKRGCDGGTPCELCKRRKKFCVRSVKKRSGPAKGTKY 165
            PQLR+SC+ CV++KR C G +PC LC R+   CVR+ K+ SGPAKGT+Y
Sbjct:  410 PQLRRSCNLCVQLKRKCSGDSPCTLCVRKGIECVRAFKRPSGPAKGTRY 458
[Close]
BLAST of mRNA_H-paniculata_contig5208.12568.1 vs. uniprot
Match: A0A836CI83_9STRA (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CI83_9STRA)

HSP 1 Score: 63.9 bits (154), Expect = 9.590e-7
Identity = 27/49 (55.10%), Postives = 35/49 (71.43%), Query Frame = 1 
Query:   19 PQLRKSCDYCVKMKRGCDGGTPCELCKRRKKFCVRSVKKRSGPAKGTKY 165
            PQLR+SC+ CV +KR C G  PC LC R+ K C+R+ K+ SGP KG +Y
Sbjct:   50 PQLRRSCNLCVSLKRKCSGDQPCTLCARKGKECIRTFKRPSGPQKGMRY 98
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5208.12568.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
D8LKM5_ECTSI6.330e-1980.36Zinc finger transcriptional regulator n=1 Tax=Ecto... [more]
D8LPZ9_ECTSI1.340e-1263.93Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L009_9PHAE1.740e-1268.52Zn(2)-C6 fungal-type domain-containing protein n=1... [more]
D7FPF9_ECTSI1.750e-1268.52Zn(2)-C6 fungal-type domain-containing protein n=1... [more]
A0A6H5L7F3_9PHAE2.010e-1267.92Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835Z8Y1_9STRA1.900e-759.18Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CI83_9STRA9.590e-755.10Zn(2)-C6 fungal-type domain-containing protein n=1... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5208contigH-paniculata_contig5208:327..7791 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons5
Model size2287
Cds size1221
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930517.7369692-UTR-H-paniculata_contig5208:326..3801622930517.7369692-UTR-H-paniculata_contig5208:326..380Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig5208 327..380 +
1691481328.1384451-UTR-H-paniculata_contig5208:326..3801691481328.1384451-UTR-H-paniculata_contig5208:326..380Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig5208 327..380 +
1622930517.8615446-UTR-H-paniculata_contig5208:6779..77911622930517.8615446-UTR-H-paniculata_contig5208:6779..7791Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig5208 6780..7791 +
1691481328.2109299-UTR-H-paniculata_contig5208:6779..77911691481328.2109299-UTR-H-paniculata_contig5208:6779..7791Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig5208 6780..7791 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930517.7503939-CDS-H-paniculata_contig5208:380..3821622930517.7503939-CDS-H-paniculata_contig5208:380..382Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5208 381..382 +
1691481328.1506956-CDS-H-paniculata_contig5208:380..3821691481328.1506956-CDS-H-paniculata_contig5208:380..382Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5208 381..382 +
1622930517.773083-CDS-H-paniculata_contig5208:585..6821622930517.773083-CDS-H-paniculata_contig5208:585..682Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5208 586..682 +
1691481328.160983-CDS-H-paniculata_contig5208:585..6821691481328.160983-CDS-H-paniculata_contig5208:585..682Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5208 586..682 +
1622930517.7913992-CDS-H-paniculata_contig5208:1776..19161622930517.7913992-CDS-H-paniculata_contig5208:1776..1916Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5208 1777..1916 +
1691481328.1770575-CDS-H-paniculata_contig5208:1776..19161691481328.1770575-CDS-H-paniculata_contig5208:1776..1916Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5208 1777..1916 +
1622930517.8116066-CDS-H-paniculata_contig5208:5433..60611622930517.8116066-CDS-H-paniculata_contig5208:5433..6061Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5208 5434..6061 +
1691481328.1873767-CDS-H-paniculata_contig5208:5433..60611691481328.1873767-CDS-H-paniculata_contig5208:5433..6061Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5208 5434..6061 +
1622930517.8419044-CDS-H-paniculata_contig5208:6425..67791622930517.8419044-CDS-H-paniculata_contig5208:6425..6779Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5208 6426..6779 +
1691481328.198451-CDS-H-paniculata_contig5208:6425..67791691481328.198451-CDS-H-paniculata_contig5208:6425..6779Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5208 6426..6779 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5208.12568.1prot_H-paniculata_contig5208.12568.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig5208 381..6779 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig5208.12568.1

>prot_H-paniculata_contig5208.12568.1 ID=prot_H-paniculata_contig5208.12568.1|Name=mRNA_H-paniculata_contig5208.12568.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=407bp
MKRGCDGGTPCELCKRRKKFCVRSVKKRSGPAKGTKYCKRRARKSPPEDS
ASPPAKAPPTTSPAGAKESVRRQTDRKTPSIQSPSVTNAPVLDPVSAKVK
RTLTTKPQPRAGNKASFPTPTAPSTSVVQCDVKKPKDVKEEKSCEEEPAA
PAVAHAVQASQEGWTDRSLHVDSHTSSNSHCESMPPFLSLGQTGDCAATS
TSAPSSHDYGLGSRNSKQELPASPRQPGSIQNVGLQGWTAAWHSGLSHCM
GSSTVACSQNTMRLVGARRGSLEEALYGSLDKRPSYASWIDIQDLDMDMK
TLSSLRWAHHGTTRDNATPWTDASGGNGAEIGASRSSLSSELMHPASDNS
CSADQGSHGFTVGARPTGGPAAATATLDDQSSLRDLLLEKWPPVPVSEVS
LAEGTW*
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mRNA from alignment at H-paniculata_contig5208:327..7791+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig5208.12568.1 ID=mRNA_H-paniculata_contig5208.12568.1|Name=mRNA_H-paniculata_contig5208.12568.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=7465bp|location=Sequence derived from alignment at H-paniculata_contig5208:327..7791+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
CAACAGGAAGATGAAGAGCCACAGCTCCGCAAGAGTTGTGATTACTGCGT
CAAAATGTGAGCCCCTTAGTTTGAGTGTGGAGCGTTGCAGGTTCACAGGC
AGTGCGTACCACTCTCCACTGGTTTGATAAGTTTCTTTATACAACAATCT
AGGTTCCTTTTATGGATCATGAAAGTTGGAAAACGCCAGATTTTCCCTAA
TTGAAAAATCGAAAATTGTGGGGAGTCAACAAAATCGCTTCCCCCGTGCT
CCTTCCTAGGAAGAGAGGGTGCGATGGAGGGACGCCGTGTGAGCTATGTA
AGAGGCGGAAGAAGTTTTGCGTACGCTCCGTGAAAAAGAGGAGCGGCCCG
GCTAAGGTCAGTTCGCAATGGTGTGAGGAACATGCTTGGTACAGATCGAT
AGTTGGTTGGGTCTAGCCAATCTTCGCTCTCAGAATCTAACCTAGTAGCG
ACATAGCTCACTTTAACTCAACAGAACCAGCTAGACGCACTAAAAAACCG
TCTGTAATATATACACAATAGAGCAGCCTTGGCTAGGGGTTGTCTTTGGT
CAAGGCGTCCTGCTAAAGTTGATGTTTATTTGTTCGTGTTGAACTGTACC
GCTCATGGGACTGTATTGTGCTACGCTCTGCTGTTCTCTGCTGCGCTCCA
CTGTAATCTAATGTATTCGTCTGTCTTTCTGCCGTCACCCTCGAAGTCGC
TTTTCGAATCGGAAACTTGGACTGCTGTACTACTGTTTGCAGTTGTGGAT
TCGTATCTGACTGTGAGATGAAGATGAAATAAAGAGATACAGCGACCTCC
GCGTGGCTTTCATGATTGAAAACAACTTGATGGTAGTCTTTAAATGTATG
TCGATCCGACGCCACGTGAGATCTAGCTGTGTAGTCACGTACAAGCGGAA
CACATACTCTAAAAAGGCATCGCCTTTTTTTTTTCGGGTCGTCATTCGAG
TCGAGAGGTCTGTGGACCGTAGCATGTCCATCAGGCCGAAAAGTCGTACA
CAAGAAAACCACGCCACTTGGGGCTGTCCATGATCTGATTTTTTTATGCC
TACAACTCTTTCGCTGTCTTCGTTGCGGCTTAATCTAATAGTCAGTCACA
AGTGTGAATTGTTGTACAGTCAGGATATAGCACAGCATCTACTTTTTCTT
CAGGGTGTTTCTGCGCCGTCCAAAATCCTGGGTATCGCGCGCCTTATAAC
AAATAGATAGCCCTAAGGCATAAATCAGTCCGGTGTTTCACACTATCAAG
TTGTTTCAGCCTGAGACTGCATTCATATTCATTGCTGCAACTCCTGAAAA
ATCACTTGTATTTGCAATAGGATACTATTTTCAAGCGTAATTGACAAAAC
GTGCCGAAAGGGCTTTACTGGTATCAGGAACTACTATGGTTGATATTTTG
TAGATACAAAATATATTTTTGATGGAAAGTCGTCGTCGTTGATCAACCAG
GGGACGAAGTACTGCAAACGAAGAGCTCGCAAAAGTCCCCCCGAGGACAG
CGCGTCACCGCCCGCCAAGGCTCCGCCCACGACCTCTCCAGCCGGAGCAA
AGGAGTCTGTGCGCCGGCAAACCGATCGCAAGACACCGAGGTGAATATGT
TCTAATGGTTGTCCATCGATTATTCCAATTCTAATTATTTTAGAACAAAG
GTCGTCTTGATATTGTACGATATGAATCTACGTCATCGAGGAGCGTGTAG
ACTCCAAACGGTTGCTCATGGTCGTGTATGGTACGTGGACATTTTTTGAA
GGCAGTCAATCTAGCCAGATGCCGAACGTGTGTGCAAAGTTCTGCTAGCA
TATGGGAAGACACTTTGTGCATTCGGCTACACACAATAGCTAACGATTTA
TAGCAACTCAAACATTCCAAGAGAGCTAGGAGCATATAGAGCTCTAAACA
GCACACCAGCGCCATTGCTGTGGGGTCTCGTTATTGGGAATAGTTGGCGA
ACTCAATTGTTGATCCAAGTAAATACTGGTGGTACCTACCGAATAGACAG
GATTTTCGTAATCGATACTGGCTGTAGTGGTGTAGCCAGTGTTTACTGGA
GAAGAACCACTCCAATCTACCAGTTTTGCAAATATCTACTGGCGGGATTG
ACTGTACTCCGTGGTTTTTCAAAGGTAGCGTTAGCCCTACGATCGAATAT
CCAGGATTTGGGTATCGATACTGGTAACACTTCTTAAAACCCAGCTTTTT
TTAGCGTCGTTACTGGCACTACTCCGTGTATTAACCACTACGAGCAAGAG
AGGTTCCAGTAACACCATTTGGATTAGATGATGGTAGGATTGGGGGTATT
AATTACTTCGTCCAAGTAAATACTGACGCTGGCCAAACGGGAATGTACAG
TGTTGAGCACTGGATACTACGAGCAAATGAGAATATATATAAACTCCTCT
CATAACGCACCGTTAGGTGTGAAGAAACTGGAGCTGTCAAGTGAGCCGCC
GAAATCGGTCGCCCCGGTGTGATGGACTTTACTCTATCGTACTCGAGTAC
TGTTCACTGTCGAATATCTGAAATCCTCTGCTTCTTGCCCTGTTGCTCGT
AGACGGTATAGAAGTCAGACAGCTTCCGTCGCCCAGCCCTGCGTCCCATT
GTTTTTGCTGAATCCCGTTTTGCGGCCCTGTTATGAGTTGTGGCTTGGCT
GGAAATTTGTTTCACTATCGCGTTGGGACCCCCGAATTACGTCACATTTT
CAATTAAGGCCCCATGGTCGGTCCTACCGCTTAGTTGAAAAATCGCTCTC
CGCGGAGGCGTCACGAGAGGGTTTCACGGTTACTCCTTGTACACACCATT
GTTTGTCAATCCCTCTTTGAAAACTGCGACGTACGTTTGGAGCTCTAGGT
TTGCTGTTTGCCCTATTGAATACCATCATGATGCGACGTCAACGTTGCAG
TCTTGCGCCTTGCCGTGATATTCTCCGAACGAAAATATACATTAGCGAAC
AAGTGCAAAATGTCAGAAACGGATGATCAAGTAGAATTGCTAATCCTAAT
TCTACCATGTCCGAGTTTGCAACATTGTCGGAAGGCTAACAAAAAAAATC
GTAGTGGTGTTCATGTGATTTTCTGTTAACGTCAAAAATTGCCGCCTCAC
CATGTATTGTGCTCCGCCGCTTAGTGCTTGTGGTAGTTCTCCACTATTTC
CCCTGGAAAAAAATCATGATGCAACATGTATGTGCGTGTGTTATGTTCGT
ACTGTGTTCTGGAAACCCCTCAGTATTGGCGGTACTGCCAGCTATAATAT
GTTATCCGTGTTGCAATCCATGTGAAACAAAAAAATAACAAGTGGGTCAA
CTAAAAAGGACATGTTTGCTTGGCGAGGACCGTGAAATGCGTTTTTTGTA
CAGGATTTGTCCATCCAGCAGCACGCTGCGCAGACTGAGAGCGCGATTAT
TTTGGACGAGTCTTTCAAGGTTTAGCCAAGATAGAACTGGGCGCGGCGTG
CACAAAATGGTTGGGAAATACAAGACGAAATGAGATATGCCATTCTGTTT
CGCAGACTTGAATATTATCTCTTTCGTCCGACGAAGTCTTTCTTACCAAA
AGCACCACATACCCAACACATGCCGACACAATGCGTTCAGTAGAGAGGCC
GAGCCAACAGCACCCCACCAAGGTGCGTCCTACAGGAGGCTTCCGCCTCG
TGCATCCTTTGACATCGTGAGCTTGTACACGACTCGCTGCCACCCGGCAG
TCAGCGATCAGTCCGTCAATACAGACACTGCAGACTGTCAGCACAATATA
TTCCTCGGGTCAACCATTGTGGCAATGACCTACGGTCAGTTCAATTCATC
TGGGTTTCGAGCACAATCCACGGTATTTTTTTTGGTACAAACTGAAAATT
TTGTAGGCATCAGACATTGCTCTGTTCGCACGCTGCTGCGCGAGATTCGA
AAGCTGTGCCAAACGTTTACCTCCCGCAGTGGGGCATTAAGCATGCCTCA
GAGTACTCACGAGGTGGTTTCGTGATCTCGAGTGTTCACGAGGTCGGGTT
CTGTGTGTCAAAGACATTTTTTCAGCGAAAGATTGTCAGCATCCGAACGA
AAATACACCAACACAAAATTCCTCACCCCAATTTCATTATTATGGAACCA
ACCACGAACTTTTAAAGATGCCGCGCGCACTTGGGGTGTCATGTCATGTC
ATGAGCTCTTGCCCAGCCTGAGACGTCGCTGATGATATGAGAAATACCGC
GGTCAGAGTGTCCGTGACGATCTGAAATTTTTATGAGTATGTAGACCGCA
ATATACCAAAATTACTCAAGAATACAGGTGAGGATTGTGATGAAATGCTT
CATTTCTCCTAAAATTTTGTTTTCATAACCATACACGGGAACGTATCACA
GTTAAGGCCAACATCTGGGTAACTCGATTGGAGAAGGACACGATGTGGTG
GTTGTGTATGCTTACGCCTCCTTGTTTTTTAAAATCTTGGATGAAATAAT
TGTTCGCCGTATGTATTGTACCGTGCGCGGTACAATTGTGACTTGACCTG
AAATTTCATCATTCTTGAGTATTTTCCAAGTAATTTACTTTCTACATGAG
AGCCGCTCGGTAAATACGGCAGTAATGGGCCTACTTGATAGTTTGCACAA
GTAAATACTGGTGGTATCGGCGAATAATCTGTATTTTCGGAATCGACACC
GGCGGTACCGCGCGTACTGTGACAGCAAGTACGTACTTTAAATATTCCAT
TGTGACCAAACAACGGGGTCATAAAACTAGAATTCTGGAAATAACATTTC
TGGAAAAGCGACGAAAACCAATCCAACGAAAAAAAAGGGTGGGGGGAAGT
GTAGACTGATAGGAACTATCCGTCCTTCATGTGGACAATGCAGCATGGGC
GATCAGGCGTAAATGACTCAAACTCGCTGTACATCACCACTGCTGCACTT
TCACGAGGATGTCAAATATCGAAGAGCTGAAGAGTCAACATTCTAACCAA
GGTGTCAACTGGGTTGAGCTGCATTATATAGTTTTTTCATCAGATGCAAA
TTTCGTCGATAACCGTCCTCGTTTCCTTCCAGTCTTTCTCTGCGGTATGC
GATGTAACGGTGTCCCCCTACTTCTGTTTCCCTCGACGACCCCGTTTGAT
CTGCTAGCATTCAAAGTCCTTCGGTGACAAATGCACCAGTCCTCGATCCC
GTCTCAGCAAAGGTGAAGCGGACGCTCACTACAAAACCACAGCCCCGCGC
TGGGAACAAGGCGTCATTTCCTACTCCGACAGCTCCTTCGACCTCCGTTG
TCCAGTGCGATGTTAAGAAACCGAAAGACGTCAAGGAGGAAAAATCTTGT
GAGGAGGAGCCCGCGGCGCCTGCTGTTGCGCATGCCGTACAGGCTTCGCA
GGAGGGATGGACAGATCGGAGCCTGCACGTGGACAGTCACACCAGCAGTA
ATAGTCACTGCGAGTCCATGCCCCCGTTCCTCTCTCTGGGACAGACCGGC
GATTGCGCCGCCACGAGCACGAGTGCGCCCAGCAGTCACGATTACGGTCT
CGGGTCGCGAAACTCCAAGCAAGAATTGCCAGCCTCTCCAAGGCAGCCCG
GCTCCATTCAAAACGTGGGGTTGCAGGGTTGGACGGCGGCATGGCACAGC
GGTTTGTCTCATTGCATGGGGTCTTCGACCGTGGCGTGTAGCCAAAACAC
GATGCGGTTGGTCGGGGCGCGACGTGGCAGCTTGGAGGAAGCACTGTACG
GGTCGCTGGACAAACGGCCGAGCTACGCCTCGTGGGTAAGTGGTCTTTTG
CTTTACCTCGCTACCTTTGCAGCCAGCACATGTATCCTTGCTGGAATTAG
CGACGCTACTGTACTGTAGTATTGCCACTGGTGTGCACGACAGCTGGTAC
GGGTGCCATCTTTGTGTGTAGGCGCATCCCAAATTATGGACAGCAATTGA
TGACTGTGTACAATTTTCCTTGCTTGGTTGACGCTTCTTGATGCCTCCAT
CCTAGCAGACTCTGCGCCAAACTCTGGCTGCTACCCTAGCCTTCAGTCCC
TCCCGTTCGTCTCTCCGCGTGAAAGACTGATGACGGCTTTCCAGTACTTG
CCATCCTCTGAGAGTGCTGCCCGTGTCGCTTGTGATCCTTGCTTCACAGA
TTGATATTCAAGACTTGGACATGGATATGAAAACGCTGTCCAGCCTCCGG
TGGGCCCACCACGGCACGACGCGAGACAACGCCACCCCGTGGACAGATGC
TAGCGGTGGGAATGGAGCGGAAATTGGGGCTTCACGTTCTTCTTTGTCAT
CGGAGTTAATGCACCCTGCATCCGATAATTCATGTTCGGCAGATCAAGGA
TCTCACGGTTTCACGGTCGGTGCGCGGCCAACCGGCGGGCCGGCCGCGGC
GACAGCCACACTCGACGACCAGTCATCTCTACGAGACCTCCTGCTCGAGA
AGTGGCCCCCTGTCCCCGTCAGCGAAGTGTCGCTCGCGGAGGGCACGTGG
TAGCTGGGTCTTCACGACTCACTCAGTGTATATCTGTGCCGTTGGCCTCT
AGGCGTTCAAGAGGTGCACTGGTGTTATGAGGGGAGAATCCTGTGTGTGT
TTTATAGGTGGCATGTATTTGTTCCTCGAATAGGCATGCTTACGGCGGGG
TTCACCAGCGTTACCTGTAGTGTCCACAGTAAGTACCATTCCCCCTTAGG
ATGGAATTCGTGAGTAATAAGTATACAGGGGACCGTCACGTTGCATTTGA
CCTTTAACGTTTACAGAGTTTTGCAAGACCTTGGGAGGTTTTCGTCGTCG
AGTGGACGATATGACGGTCCCAAACCGGCCATCTCAGACCGGAGAAGCAG
ATTGTGTGTGTTCAGGTAGGGGGACAGGTGCGATATTTTAGTCATAATTC
AGTCGTTTACCTTTTTGTCAAGTACTGTTGGTGATGTGGTGGGTGAGGAC
ATGAATGCGGTATCCGTATCATGGTTCACATTCTTGGTTGTCGTTGTTCA
TTGTTGATTGTTGGCGCGTGCATTTTCCGTTTTTTGTCTTCGAGCGGGCA
CTTGGTTCAATGTCTGGTGGTGCTCGAAGACGTGCGATTGTTCATTTCAC
ACTTGGTTGTTTGTGTCGTTGTTCATGGTGTATTCTGGGGGGGTATTTTT
GTGAGCTTGTGAGTTGAAAGTAAAAGCCGTCCTACAGGGGTAGTGTAACG
GCATGGACGGAGGTCAAGAGCAAAAAACAAACTGACACCAGCCATCCGTC
GTATTCAGTGCACAACGGCAATAAAAACAGCAAAAACGCATTTACATTAC
GGGAAGGGTAGGTATTTTGTTGCTGCTGTTGTTGCTGTGTTCACTAGTCG
GGACATGAAATTGTTATAGGGTCAAGCAGCAAAGAGGGAACGCTTTGCAC
AGCAGTGTGTGATCCTTTGCATGGATCGGTCTGTGGAAAGAACGCACACC
TGAGGGCCTGTTGCGACATCGCGCGACCCGCAAATTTCAGTCCCGTGTCG
CGATATGAAGGGGGG
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Coding sequence (CDS) from alignment at H-paniculata_contig5208:327..7791+

>mRNA_H-paniculata_contig5208.12568.1 ID=mRNA_H-paniculata_contig5208.12568.1|Name=mRNA_H-paniculata_contig5208.12568.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2442bp|location=Sequence derived from alignment at H-paniculata_contig5208:327..7791+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATATGAAGAGAGGGTGCGATGGAGGGACGCCGTGTGAGCTATGTAAGAGG
CGGAAGAAGTTTTGCGTACGCTCCGTGAAAAAGAGGAGCGGCCCGGCTAA
GGAAGAGAGGGTGCGATGGAGGGACGCCGTGTGAGCTATGTAAGAGGCGG
AAGAAGTTTTGCGTACGCTCCGTGAAAAAGAGGAGCGGCCCGGCTAAGGG
GACGAAGTACTGCAAACGAAGAGCTCGCAAAAGTCCCCCCGAGGACAGCG
CGTCACCGCCCGCCAAGGCTCCGCCCACGACCTCTCCAGCCGGAGCAAAG
GAGTCTGTGCGCCGGCAAACCGATCGCAAGACACCGAGGGGACGAAGTAC
TGCAAACGAAGAGCTCGCAAAAGTCCCCCCGAGGACAGCGCGTCACCGCC
CGCCAAGGCTCCGCCCACGACCTCTCCAGCCGGAGCAAAGGAGTCTGTGC
GCCGGCAAACCGATCGCAAGACACCGAGCATTCAAAGTCCTTCGGTGACA
AATGCACCAGTCCTCGATCCCGTCTCAGCAAAGGTGAAGCGGACGCTCAC
TACAAAACCACAGCCCCGCGCTGGGAACAAGGCGTCATTTCCTACTCCGA
CAGCTCCTTCGACCTCCGTTGTCCAGTGCGATGTTAAGAAACCGAAAGAC
GTCAAGGAGGAAAAATCTTGTGAGGAGGAGCCCGCGGCGCCTGCTGTTGC
GCATGCCGTACAGGCTTCGCAGGAGGGATGGACAGATCGGAGCCTGCACG
TGGACAGTCACACCAGCAGTAATAGTCACTGCGAGTCCATGCCCCCGTTC
CTCTCTCTGGGACAGACCGGCGATTGCGCCGCCACGAGCACGAGTGCGCC
CAGCAGTCACGATTACGGTCTCGGGTCGCGAAACTCCAAGCAAGAATTGC
CAGCCTCTCCAAGGCAGCCCGGCTCCATTCAAAACGTGGGGTTGCAGGGT
TGGACGGCGGCATGGCACAGCGGTTTGTCTCATTGCATGGGGTCTTCGAC
CGTGGCGTGTAGCCAAAACACGATGCGGTTGGTCGGGGCGCGACGTGGCA
GCTTGGAGGAAGCACTGTACGGGTCGCTGGACAAACGGCCGAGCTACGCC
TCGTGGCATTCAAAGTCCTTCGGTGACAAATGCACCAGTCCTCGATCCCG
TCTCAGCAAAGGTGAAGCGGACGCTCACTACAAAACCACAGCCCCGCGCT
GGGAACAAGGCGTCATTTCCTACTCCGACAGCTCCTTCGACCTCCGTTGT
CCAGTGCGATGTTAAGAAACCGAAAGACGTCAAGGAGGAAAAATCTTGTG
AGGAGGAGCCCGCGGCGCCTGCTGTTGCGCATGCCGTACAGGCTTCGCAG
GAGGGATGGACAGATCGGAGCCTGCACGTGGACAGTCACACCAGCAGTAA
TAGTCACTGCGAGTCCATGCCCCCGTTCCTCTCTCTGGGACAGACCGGCG
ATTGCGCCGCCACGAGCACGAGTGCGCCCAGCAGTCACGATTACGGTCTC
GGGTCGCGAAACTCCAAGCAAGAATTGCCAGCCTCTCCAAGGCAGCCCGG
CTCCATTCAAAACGTGGGGTTGCAGGGTTGGACGGCGGCATGGCACAGCG
GTTTGTCTCATTGCATGGGGTCTTCGACCGTGGCGTGTAGCCAAAACACG
ATGCGGTTGGTCGGGGCGCGACGTGGCAGCTTGGAGGAAGCACTGTACGG
GTCGCTGGACAAACGGCCGAGCTACGCCTCGTGGATTGATATTCAAGACT
TGGACATGGATATGAAAACGCTGTCCAGCCTCCGGTGGGCCCACCACGGC
ACGACGCGAGACAACGCCACCCCGTGGACAGATGCTAGCGGTGGGAATGG
AGCGGAAATTGGGGCTTCACGTTCTTCTTTGTCATCGGAGTTAATGCACC
CTGCATCCGATAATTCATGTTCGGCAGATCAAGGATCTCACGGTTTCACG
GTCGGTGCGCGGCCAACCGGCGGGCCGGCCGCGGCGACAGCCACACTCGA
CGACCAGTCATCTCTACGAGACCTCCTGCTCGAGAAGTGGCCCCCTGTCC
CCGTCAGCGAAGTGTCGCTCGCGGAGGGCACGTGGTAGATTGATATTCAA
GACTTGGACATGGATATGAAAACGCTGTCCAGCCTCCGGTGGGCCCACCA
CGGCACGACGCGAGACAACGCCACCCCGTGGACAGATGCTAGCGGTGGGA
ATGGAGCGGAAATTGGGGCTTCACGTTCTTCTTTGTCATCGGAGTTAATG
CACCCTGCATCCGATAATTCATGTTCGGCAGATCAAGGATCTCACGGTTT
CACGGTCGGTGCGCGGCCAACCGGCGGGCCGGCCGCGGCGACAGCCACAC
TCGACGACCAGTCATCTCTACGAGACCTCCTGCTCGAGAAGTGGCCCCCT
GTCCCCGTCAGCGAAGTGTCGCTCGCGGAGGGCACGTGGTAG
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