mRNA_H-paniculata_contig52063.12567.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig52063.12567.1 vs. uniprot
Match: A0A8F0F7H1_9PHAE (Chaperonin GroEL n=1 Tax=Protohalopteris sp. TaxID=2843287 RepID=A0A8F0F7H1_9PHAE) HSP 1 Score: 657 bits (1696), Expect = 1.580e-234 Identity = 347/373 (93.03%), Postives = 361/373 (96.78%), Query Frame = 3
Query: 72 EIGSMIAKALKIVGRDGIISLEESTSTFTELVITEGMRLDKGFISPYFITNPEKAEAEYENPYILITNKKLTLVQQDLVPILEKVAFTKRPLLIIAEDIEKEALSTLVLNKLRGIVQVVAIRAPGFGDFRKSLLEDIAILTDGTLINEELGLRLDNVPLTLLGKASRIIVTKESTTLITKGNKENIKNRCEQLKKQIITSDSSYDIEKLKDRIAKLSGGIAVIKVGAVTETEMKDKKLRLEDAINATRAAVEEGIIPGGGAFLTHLSAPLRLWSQKNLKDDQLIGAYILAESIKEPLKRIAENTGKNGSVITEIVESGDIEFGYNAEINEFGDMFSYGVVDPAKVTRSALQNAISIASMILTTECIVVEDKIE 1190
+IGSMIAKAL IVGRDGIISLEES +TFTEL ITEGMRLDKGFISPYFITNPEKAE EYENP+ILITNKKLTLVQQDLVPILEKVAFTKRPLLIIAEDIEKEALSTLVLNKLRGIV VVAIRAPGFGDFRKSLLEDIAILT GTLI EELGLRLD+V LTLLG+ASRII+TKES+TLIT+GN ENIKNRCEQLKKQIITSDSSYDIEKLKDRIAKLSGGIAVIKVGAVTETEMKDKKLRLEDAINATRAAVEEGIIPGGGAFLTHLS PL+LW+++NLKDDQLIGAYILAESIKEPLKRIAENTGKNGSVITEIVESG IEFGYNAEIN+FGDMFSYG+VDPAKVTRSALQNAISIASMILTTECIVV DKIE
Sbjct: 138 QIGSMIAKALNIVGRDGIISLEESNNTFTELAITEGMRLDKGFISPYFITNPEKAEVEYENPFILITNKKLTLVQQDLVPILEKVAFTKRPLLIIAEDIEKEALSTLVLNKLRGIVNVVAIRAPGFGDFRKSLLEDIAILTGGTLITEELGLRLDSVELTLLGEASRIIITKESSTLITEGNSENIKNRCEQLKKQIITSDSSYDIEKLKDRIAKLSGGIAVIKVGAVTETEMKDKKLRLEDAINATRAAVEEGIIPGGGAFLTHLSPPLKLWARQNLKDDQLIGAYILAESIKEPLKRIAENTGKNGSVITEIVESGVIEFGYNAEINKFGDMFSYGIVDPAKVTRSALQNAISIASMILTTECIVVSDKIE 510
BLAST of mRNA_H-paniculata_contig52063.12567.1 vs. uniprot
Match: D1GJF9_FUCVE (Chaperonin GroEL, chloroplastic n=50 Tax=Phaeophyceae TaxID=2870 RepID=D1GJF9_FUCVE) HSP 1 Score: 597 bits (1538), Expect = 3.160e-210 Identity = 309/371 (83.29%), Postives = 342/371 (92.18%), Query Frame = 3
Query: 72 EIGSMIAKALKIVGRDGIISLEESTSTFTELVITEGMRLDKGFISPYFITNPEKAEAEYENPYILITNKKLTLVQQDLVPILEKVAFTKRPLLIIAEDIEKEALSTLVLNKLRGIVQVVAIRAPGFGDFRKSLLEDIAILTDGTLINEELGLRLDNVPLTLLGKASRIIVTKESTTLITKGNKENIKNRCEQLKKQIITSDSSYDIEKLKDRIAKLSGGIAVIKVGAVTETEMKDKKLRLEDAINATRAAVEEGIIPGGGAFLTHLSAPLRLWSQKNLKDDQLIGAYILAESIKEPLKRIAENTGKNGSVITEIVESGDIEFGYNAEINEFGDMFSYGVVDPAKVTRSALQNAISIASMILTTECIVVEDK 1184
EIG+MIAKALK VG DGIISLEES +TFTEL IT+GMRL+KGFISPYFITNPEK E EY+NP+ILITNKKLTLVQQDL+PILEKVA TK PLLIIAEDIEKEALSTLVLNKLRGIV VVAIRAP FGDFRK LLEDIAILT GTLI EELGLRLDNV L +LGKASRIIVTK+STT+IT+GN++NIKNRC+QLKKQI +S YDIEK+KDRIAKLSGG+AVIKVGAVTETEMKDKKLRLEDAINATRAAVEEGIIPGGGA LTHLS L+LW+++NLKDDQLIGAYILA+SIKEPLKRIA+NTG NG VI +++E + EFGYNAEIN+FG+MF+YG+VDPAKVTRSALQNAISIASMILTTECI+V +K
Sbjct: 156 EIGTMIAKALKTVGSDGIISLEESNNTFTELSITQGMRLEKGFISPYFITNPEKGEVEYQNPFILITNKKLTLVQQDLIPILEKVAVTKTPLLIIAEDIEKEALSTLVLNKLRGIVNVVAIRAPSFGDFRKYLLEDIAILTHGTLITEELGLRLDNVELDVLGKASRIIVTKDSTTIITEGNRDNIKNRCDQLKKQIAMKESVYDIEKIKDRIAKLSGGVAVIKVGAVTETEMKDKKLRLEDAINATRAAVEEGIIPGGGATLTHLSTSLKLWAKQNLKDDQLIGAYILADSIKEPLKRIADNTGANGGVIADLLEERNFEFGYNAEINKFGNMFNYGIVDPAKVTRSALQNAISIASMILTTECIIVSNK 526
BLAST of mRNA_H-paniculata_contig52063.12567.1 vs. uniprot
Match: A0A141BSB8_9PHAE (Chaperonin GroEL, chloroplastic n=7 Tax=Sargassum TaxID=3015 RepID=A0A141BSB8_9PHAE) HSP 1 Score: 594 bits (1531), Expect = 3.660e-209 Identity = 309/371 (83.29%), Postives = 340/371 (91.64%), Query Frame = 3
Query: 72 EIGSMIAKALKIVGRDGIISLEESTSTFTELVITEGMRLDKGFISPYFITNPEKAEAEYENPYILITNKKLTLVQQDLVPILEKVAFTKRPLLIIAEDIEKEALSTLVLNKLRGIVQVVAIRAPGFGDFRKSLLEDIAILTDGTLINEELGLRLDNVPLTLLGKASRIIVTKESTTLITKGNKENIKNRCEQLKKQIITSDSSYDIEKLKDRIAKLSGGIAVIKVGAVTETEMKDKKLRLEDAINATRAAVEEGIIPGGGAFLTHLSAPLRLWSQKNLKDDQLIGAYILAESIKEPLKRIAENTGKNGSVITEIVESGDIEFGYNAEINEFGDMFSYGVVDPAKVTRSALQNAISIASMILTTECIVVEDK 1184
EIGSMI KALK VGR+GIISLEES +T EL ITEGM+L+KGFISPYFITN EK E EYENP+ILITNKKLTLVQQDL+PILEKVAFTK+PLLIIAEDIEKEALSTLVLNKLRGI+ VVAIRAPGFGDFRK LLEDIAILT GTLI+E+LGLRLDN+ L LLGKASRIIVTK+STT+IT GN +NIK RC+QLKKQI +S YDIEK+KDRIAKLSGGIA+I+VGAVTETEMKDKKLRLEDAINATRAAVEEGIIPGGGA LTHLS PL+LW+++NL DDQLIGAYILA+SIK+PLKRIA NTGKNGSVIT++VE EFGYNAEIN+FGDMF +G+VDPAKVTRSALQNAISIASMILTTECIVV +K
Sbjct: 156 EIGSMITKALKTVGREGIISLEESNNTSIELSITEGMKLEKGFISPYFITNSEKGEVEYENPFILITNKKLTLVQQDLIPILEKVAFTKKPLLIIAEDIEKEALSTLVLNKLRGIINVVAIRAPGFGDFRKYLLEDIAILTQGTLISEDLGLRLDNIELNLLGKASRIIVTKDSTTIITDGNNDNIKTRCDQLKKQISMKESLYDIEKIKDRIAKLSGGIALIRVGAVTETEMKDKKLRLEDAINATRAAVEEGIIPGGGAALTHLSTPLKLWAKQNLTDDQLIGAYILADSIKDPLKRIAINTGKNGSVITDLVEEKYFEFGYNAEINQFGDMFKFGIVDPAKVTRSALQNAISIASMILTTECIVVSNK 526
BLAST of mRNA_H-paniculata_contig52063.12567.1 vs. uniprot
Match: A0A2I4Q2B6_9PHAE (Chaperonin GroEL, chloroplastic n=1 Tax=Dictyopteris divaricata TaxID=156996 RepID=A0A2I4Q2B6_9PHAE) HSP 1 Score: 589 bits (1519), Expect = 2.520e-207 Identity = 306/374 (81.82%), Postives = 344/374 (91.98%), Query Frame = 3
Query: 72 EIGSMIAKALKIVGRDGIISLEESTSTFTELVITEGMRLDKGFISPYFITNPEKAEAEYENPYILITNKKLTLVQQDLVPILEKVAFTKRPLLIIAEDIEKEALSTLVLNKLRGIVQVVAIRAPGFGDFRKSLLEDIAILTDGTLINEELGLRLDNVPLTLLGKASRIIVTKESTTLITKGNKENIKNRCEQLKKQIITSDSSYDIEKLKDRIAKLSGGIAVIKVGAVTETEMKDKKLRLEDAINATRAAVEEGIIPGGGAFLTHLSAPLRLWSQKNLKDDQLIGAYILAESIKEPLKRIAENTGKNGSVITEIVESGDIEFGYNAEINEFGDMFSYGVVDPAKVTRSALQNAISIASMILTTECIVV-EDKIE 1190
EIG MIA+AL IVGRDGIISLEES +TFTEL ITEGMRLDKGFISPYFIT+PEKAE +YE P+ILITNK+LTLVQQDL+P+LEKVA TKRPLLIIAEDIEKEALSTLVLNKLRGI+ VVAIRAPGFGDFR++LLEDIAILT GTLI E+LGL+L+N+ LTLLG+AS+IIV K+ST +IT N ENI+NRCEQLKKQII S+SSYD EKLKDR+AKLSGGIA+IKVGAVTETEMKDKKLRLEDAINATRAAVEEGIIPGGGA LTH S L+LW+++NLK+DQLIGAYILAE+I EPLK+IAENTGKNGSVI E++ + EFGYNAEINEFG+MF YG+VDPAKVTRSALQNA+SIASMILTTECIVV E+K+E
Sbjct: 156 EIGKMIAEALNIVGRDGIISLEESNNTFTELNITEGMRLDKGFISPYFITDPEKAEVQYEKPFILITNKRLTLVQQDLIPVLEKVAITKRPLLIIAEDIEKEALSTLVLNKLRGIIPVVAIRAPGFGDFRQALLEDIAILTRGTLITEDLGLKLENIELTLLGEASKIIVAKDSTVIITNDNTENIRNRCEQLKKQIIISESSYDTEKLKDRVAKLSGGIAIIKVGAVTETEMKDKKLRLEDAINATRAAVEEGIIPGGGATLTHFSTQLKLWAKQNLKEDQLIGAYILAEAIIEPLKKIAENTGKNGSVIVEMLGDQNFEFGYNAEINEFGNMFDYGIVDPAKVTRSALQNAVSIASMILTTECIVVTENKVE 529
BLAST of mRNA_H-paniculata_contig52063.12567.1 vs. uniprot
Match: A0A8E5XRF2_9PHAE (Chaperonin GroEL, chloroplastic n=1 Tax=Ishige okamurae TaxID=233772 RepID=A0A8E5XRF2_9PHAE) HSP 1 Score: 572 bits (1474), Expect = 1.610e-200 Identity = 295/370 (79.73%), Postives = 332/370 (89.73%), Query Frame = 3
Query: 72 EIGSMIAKALKIVGRDGIISLEESTSTFTELVITEGMRLDKGFISPYFITNPEKAEAEYENPYILITNKKLTLVQQDLVPILEKVAFTKRPLLIIAEDIEKEALSTLVLNKLRGIVQVVAIRAPGFGDFRKSLLEDIAILTDGTLINEELGLRLDNVPLTLLGKASRIIVTKESTTLITKGNKENIKNRCEQLKKQIITSDSSYDIEKLKDRIAKLSGGIAVIKVGAVTETEMKDKKLRLEDAINATRAAVEEGIIPGGGAFLTHLSAPLRLWSQKNLKDDQLIGAYILAESIKEPLKRIAENTGKNGSVITEIVESGDIEFGYNAEINEFGDMFSYGVVDPAKVTRSALQNAISIASMILTTECIVVED 1181
EIGSMIA ALK +GRDGIISLEE T+TF EL ITEGMRL+KGFISPYF+TNPE++E EYENP+ILIT+KKLTLV QDL+P+LEKVA TKRPLLIIAEDIEKEALSTLVLNKLRGI+ VVAIRAPGFG RKSLLEDIAILT GTL+ EE GL+LD++ L LLGKASRI +TK+STT+IT+GN+ IKNRCEQLKKQ+ TS+SSYD EKLKDRIAKLSGGIAVIKVGAVTETEMKDKKLRLEDAINATRAAVEEGIIPGGG+ LTH S PLRLW+++NL+ DQLIGAYILA++IKEPLKRIAENTGKNGS+IT+ +E + GYNAE N FG++F GVVDPAKVTRSALQN+ SIA MILTTECI+V D
Sbjct: 157 EIGSMIALALKTIGRDGIISLEEGTNTFIELTITEGMRLEKGFISPYFVTNPERSEVEYENPFILITDKKLTLVHQDLIPVLEKVANTKRPLLIIAEDIEKEALSTLVLNKLRGIIPVVAIRAPGFGSLRKSLLEDIAILTGGTLVTEETGLKLDSIELELLGKASRITLTKDSTTIITEGNQLAIKNRCEQLKKQLATSESSYDSEKLKDRIAKLSGGIAVIKVGAVTETEMKDKKLRLEDAINATRAAVEEGIIPGGGSTLTHFSLPLRLWAKQNLQGDQLIGAYILADAIKEPLKRIAENTGKNGSIITQTIEESSFDIGYNAETNVFGNIFEQGVVDPAKVTRSALQNSTSIAGMILTTECIIVSD 526
BLAST of mRNA_H-paniculata_contig52063.12567.1 vs. uniprot
Match: A0A1I9LVQ1_9PHAE (Chaperonin GroEL, chloroplastic n=1 Tax=Pleurocladia lacustris TaxID=246121 RepID=A0A1I9LVQ1_9PHAE) HSP 1 Score: 565 bits (1457), Expect = 6.360e-198 Identity = 296/372 (79.57%), Postives = 331/372 (88.98%), Query Frame = 3
Query: 72 EIGSMIAKALKIVGRDGIISLEESTSTFTELVITEGMRLDKGFISPYFITNPEKAEAEYENPYILITNKKLTLVQQDLVPILEKVAFTKRPLLIIAEDIEKEALSTLVLNKLRGIVQVVAIRAPGFGDFRKSLLEDIAILTDGTLINEELGLRLDNVPLTLLGKASRIIVTKESTTLITKGNKENIKNRCEQLKKQIITSDSSYDIEKLKDRIAKLSGGIAVIKVGAVTETEMKDKKLRLEDAINATRAAVEEGIIPGGGAFLTHLSAPLRLWSQKNLKDDQLIGAYILAESIKEPLKRIAENTGKNGSVITEIVESGDIEFGYNAEINEFGDMFSYGVVDPAKVTRSALQNAISIASMILTTECIVVEDKI 1187
E+G MIA ALK VGRDGIISLEES +TF ++ I++GMRLDKGFISPYFITN EK E EYENP+ILITNKKLTLVQQDL+P+LEKVA T RPLLIIAEDIEKEALSTLVLNKLRGIV VVAIRAPGFGD RK+LLEDIAILT GTLI E+LGL L+ + L LLG+ASRIIVTK+ TT+ITK N +I+NRCEQLKKQI T+ Y++E+LKDRIAKLSGGIA+IKVGAVTETE+K+KKLRLEDAINATRAAVEEGIIPGGGA LTHLS PL+LW+++NLKDDQLIGAYILA+SIKEPLKRIAEN GKNGSVI ++VE EFGYNAE NEF +MF G+VDPAKVTRSALQNAISIA MILTTECIVV +KI
Sbjct: 156 ELGFMIAHALKCVGRDGIISLEESNTTFIDIAISDGMRLDKGFISPYFITNAEKGEVEYENPFILITNKKLTLVQQDLIPVLEKVAPTHRPLLIIAEDIEKEALSTLVLNKLRGIVNVVAIRAPGFGDLRKALLEDIAILTGGTLITEDLGLSLEKIELDLLGQASRIIVTKDETTIITKSNVNDIRNRCEQLKKQIATNYIIYEVEQLKDRIAKLSGGIAIIKVGAVTETEIKEKKLRLEDAINATRAAVEEGIIPGGGATLTHLSTPLKLWAKQNLKDDQLIGAYILADSIKEPLKRIAENAGKNGSVIIDLVEEKSFEFGYNAETNEFVNMFESGIVDPAKVTRSALQNAISIAGMILTTECIVVTNKI 527
BLAST of mRNA_H-paniculata_contig52063.12567.1 vs. uniprot
Match: B7T225_VAULI (Chaperonin GroEL, chloroplastic n=1 Tax=Vaucheria litorea TaxID=109269 RepID=B7T225_VAULI) HSP 1 Score: 516 bits (1330), Expect = 1.120e-178 Identity = 265/371 (71.43%), Postives = 321/371 (86.52%), Query Frame = 3
Query: 69 AEIGSMIAKALKIVGRDGIISLEESTSTFTELVITEGMRLDKGFISPYFITNPEKAEAEYENPYILITNKKLTLVQQDLVPILEKVAFTKRPLLIIAEDIEKEALSTLVLNKLRGIVQVVAIRAPGFGDFRKSLLEDIAILTDGTLINEELGLRLDNVPLTLLGKASRIIVTKESTTLITKGNKENIKNRCEQLKKQIITSDSSYDIEKLKDRIAKLSGGIAVIKVGAVTETEMKDKKLRLEDAINATRAAVEEGIIPGGGAFLTHLSAPLRLWSQKNLKDDQLIGAYILAESIKEPLKRIAENTGKNGSVITEIVESGDIEFGYNAEINEFGDMFSYGVVDPAKVTRSALQNAISIASMILTTECIVVED 1181
+EIG+MIA AL+ VGRDGIISLEE TS TEL ITEGMR DKGFISPYF+TNPE+ E EYEN +ILIT+KK+TLVQQDL+PILEK+A TKRPLLII+EDIEKEAL+TLVLNKLR IV VVA+RAPGFGD RKSLLEDIAILT+GTLI E+ GL+L+N+ L LLGKA +I+V K++TT++++GN +NI RCEQL+K I +++S Y+ EKL+DR+AKL+GGIAVIKVGAVTETEMKDKKLRLEDAINAT+AAVEEGI+PGGG L HL+ L+ WS+ NLK+D+L+GA ILA+SI EPL RI+EN GKNG +I E V+ + E+GYNA +N+F +MF G++DPAKVTRSALQNA SIA MILTTECIVV++
Sbjct: 155 SEIGNMIADALEQVGRDGIISLEEGTSISTELEITEGMRFDKGFISPYFVTNPERIEVEYENCFILITDKKITLVQQDLIPILEKIAPTKRPLLIISEDIEKEALATLVLNKLRNIVNVVAVRAPGFGDSRKSLLEDIAILTEGTLITEDTGLKLENINLELLGKARKILVKKDNTTIVSQGNNKNITLRCEQLRKLISSTESLYEKEKLQDRVAKLAGGIAVIKVGAVTETEMKDKKLRLEDAINATKAAVEEGIVPGGGTLLVHLAESLKNWSKANLKEDELVGASILAKSILEPLNRISENAGKNGLMIIETVQKNNFEYGYNASLNKFENMFESGIIDPAKVTRSALQNASSIAGMILTTECIVVDN 525
BLAST of mRNA_H-paniculata_contig52063.12567.1 vs. uniprot
Match: A0A7S6U9T2_9STRA (Chaperonin GroEL, chloroplastic n=1 Tax=Schizocladia ischiensis TaxID=196139 RepID=A0A7S6U9T2_9STRA) HSP 1 Score: 499 bits (1285), Expect = 7.980e-172 Identity = 254/373 (68.10%), Postives = 318/373 (85.25%), Query Frame = 3
Query: 72 EIGSMIAKALKIVGRDGIISLEESTSTFTELVITEGMRLDKGFISPYFITNPEKAEAEYENPYILITNKKLTLVQQDLVPILEKVAFTKRPLLIIAEDIEKEALSTLVLNKLRGIVQVVAIRAPGFGDFRKSLLEDIAILTDGTLINEELGLRLDNVPLTLLGKASRIIVTKESTTLITKGNKEN-IKNRCEQLKKQIITSDSSYDIEKLKDRIAKLSGGIAVIKVGAVTETEMKDKKLRLEDAINATRAAVEEGIIPGGGAFLTHLSAPLRLWSQKNLKDDQLIGAYILAESIKEPLKRIAENTGKNGSVITEIV-ESGDIEFGYNAEINEFGDMFSYGVVDPAKVTRSALQNAISIASMILTTECIVVEDK 1184
+G +IA A++ VGRDGIISLEE+ T T+++ITEGM+LDKG++SPYFITNPEKA+ +YENPYILIT++KLT+VQ+DLVP+LEK+A TKRPLLIIAEDIEKE L+TLVLNKLRGIV VVAIRAPGFGDFRK LLEDIA+LT G LI EE GLRL N+ + LG+A R+IVT+E TT+I++ N + I RCE LK+Q+ ++S+Y+ EK +DRIAKL+GGIA+IKVGAVTETE+KDKKLRLEDAINAT+AAVEEGI+PGGG H++ LRLW++ NLK+D+L+GAYI+AE+I +P KRI EN+GKN VI + E+G +E GY+ E NE+G+MFS+G++DPAKV+RSALQNA SIA MILTTECIVVE+K
Sbjct: 156 SVGKLIANAIERVGRDGIISLEEAKGTKTQMLITEGMKLDKGYLSPYFITNPEKAKVDYENPYILITDQKLTMVQRDLVPVLEKIAATKRPLLIIAEDIEKEILATLVLNKLRGIVNVVAIRAPGFGDFRKLLLEDIAVLTGGVLITEEAGLRLANMEMDWLGQARRVIVTREDTTIISELNDNSKIVKRCESLKRQLAMANSAYEEEKFRDRIAKLTGGIAIIKVGAVTETELKDKKLRLEDAINATKAAVEEGIVPGGGTTFVHIAEKLRLWAKTNLKNDELVGAYIIAEAILQPFKRIIENSGKNSGVILGFLQENGSLETGYDVENNEYGNMFSFGIIDPAKVSRSALQNAASIAGMILTTECIVVENK 528
BLAST of mRNA_H-paniculata_contig52063.12567.1 vs. uniprot
Match: A0A1Z8UKY4_9PROT (Chaperonin GroEL n=2 Tax=cellular organisms TaxID=131567 RepID=A0A1Z8UKY4_9PROT) HSP 1 Score: 490 bits (1262), Expect = 2.610e-168 Identity = 251/370 (67.84%), Postives = 303/370 (81.89%), Query Frame = 3
Query: 72 EIGSMIAKALKIVGRDGIISLEESTSTFTELVITEGMRLDKGFISPYFITNPEKAEAEYENPYILITNKKLTLVQQDLVPILEKVAFTKRPLLIIAEDIEKEALSTLVLNKLRGIVQVVAIRAPGFGDFRKSLLEDIAILTDGTLINEELGLRLDNVPLTLLGKASRIIVTKESTTLITKGNKENIKNRCEQLKKQIITSDSSYDIEKLKDRIAKLSGGIAVIKVGAVTETEMKDKKLRLEDAINATRAAVEEGIIPGGGAFLTHLSAPLRLWSQKNLKDDQLIGAYILAESIKEPLKRIAENTGKNGSVITEIVESGDIEFGYNAEINEFGDMFSYGVVDPAKVTRSALQNAISIASMILTTECIVVED 1181
EIG MIA AL VG+DG+ISLEE ST +L I+EGMR DKGFISPYFITNPE+ E ENPYILIT+KK+TLV+QDL+PILE+VA TKRPLLIIA D+EKEAL+TL+LNKLR I+ VVA+RAP FG RK +LEDIAIL+DG LI ++ GL L+NV LT LG+A R++VTK+ TT+I +G ++ +K CE L+KQI SD +Y E+L+DRIAKLSGG+AVIKVGAVTETEMKDKKLRLEDAINATRAAVEEGI+PGGG HL+ L+ W++ NL++D+LIGA IL ++I PL+RIAEN GKN +I E +E GD FGYNA + FGDMF +G+VDPAKV+RSALQNA SIA MILTTECIVVE+
Sbjct: 157 EIGDMIASALDKVGKDGVISLEEGKSTTIDLEISEGMRFDKGFISPYFITNPERMECVLENPYILITDKKITLVKQDLIPILEQVARTKRPLLIIAADVEKEALTTLILNKLRNIINVVAVRAPAFGALRKPILEDIAILSDGQLITDDTGLSLENVDLTQLGQARRVVVTKDDTTIINEGTEDVVKEHCESLRKQIKVSDDAYQREQLQDRIAKLSGGVAVIKVGAVTETEMKDKKLRLEDAINATRAAVEEGIVPGGGTMFVHLAESLKEWAKVNLREDELIGALILEKAITAPLRRIAENAGKNNFIIIEQIEKGDFTFGYNAANDTFGDMFDFGIVDPAKVSRSALQNATSIAGMILTTECIVVEN 526
BLAST of mRNA_H-paniculata_contig52063.12567.1 vs. uniprot
Match: A0A2U9NM60_9STRA (Chaperonin GroEL, chloroplastic n=2 Tax=Proboscia TaxID=216776 RepID=A0A2U9NM60_9STRA) HSP 1 Score: 488 bits (1255), Expect = 2.630e-167 Identity = 250/368 (67.93%), Postives = 308/368 (83.70%), Query Frame = 3
Query: 75 IGSMIAKALKIVGRDGIISLEESTSTFTELVITEGMRLDKGFISPYFITNPEKAEAEYENPYILITNKKLTLVQQDLVPILEKVAFTKRPLLIIAEDIEKEALSTLVLNKLRGIVQVVAIRAPGFGDFRKSLLEDIAILTDGTLINEELGLRLDNVPLTLLGKASRIIVTKESTTLITKGNKENIKNRCEQLKKQIITSDSSYDIEKLKDRIAKLSGGIAVIKVGAVTETEMKDKKLRLEDAINATRAAVEEGIIPGGGAFLTHLSAPLRLWSQKNLKDDQLIGAYILAESIKEPLKRIAENTGKNGSVITEIVESGDIEFGYNAEINEFGDMFSYGVVDPAKVTRSALQNAISIASMILTTECIVVE 1178
IG +IA AL VG++G+ISLEE TEL ITEGM+L+ GFISPYFITN +K EA YENP IL+T+K++TLVQQDL+P+LE+V TKRPLLIIA+DIEKEAL+TL+LNKLRGIV VVAIRAPGFG+ RK +LEDIAILT G++I ++ GL LDN+ L LLG+A R+I+TK+S+T++ +G ++ IK RCEQL+KQI +D+ Y+ E+L+DRIAKLSGGIAVIKVGAVTETEMKDKKLRLEDAINATRAAVEEGI+PGGGA HLS ++ W++ NLKDD+LIGA I++ +I PLKRIAEN G NG+VI E V+ + E GYNA N FG+M+ G++DPAKVTRSALQNA SIASMILTTECI+V+
Sbjct: 157 IGCLIADALAKVGKEGVISLEEGKGIITELEITEGMKLENGFISPYFITNTDKMEALYENPLILLTDKRITLVQQDLLPVLEQVTKTKRPLLIIAQDIEKEALATLILNKLRGIVDVVAIRAPGFGELRKLILEDIAILTGGSVITQDAGLSLDNIQLNLLGEARRVIITKDSSTIVAEGTEKAIKIRCEQLRKQINLADTDYEKERLQDRIAKLSGGIAVIKVGAVTETEMKDKKLRLEDAINATRAAVEEGIVPGGGATFVHLSQIIKAWAKNNLKDDELIGAIIISNAILAPLKRIAENAGINGAVIVEQVQQENFELGYNAAKNTFGNMYELGIIDPAKVTRSALQNATSIASMILTTECIIVD 524 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig52063.12567.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig52063.12567.1 >prot_H-paniculata_contig52063.12567.1 ID=prot_H-paniculata_contig52063.12567.1|Name=mRNA_H-paniculata_contig52063.12567.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=370bp MIAKALKIVGRDGIISLEESTSTFTELVITEGMRLDKGFISPYFITNPEKback to top mRNA from alignment at H-paniculata_contig52063:11..1203+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig52063.12567.1 ID=mRNA_H-paniculata_contig52063.12567.1|Name=mRNA_H-paniculata_contig52063.12567.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1193bp|location=Sequence derived from alignment at H-paniculata_contig52063:11..1203+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig52063:11..1203+ >mRNA_H-paniculata_contig52063.12567.1 ID=mRNA_H-paniculata_contig52063.12567.1|Name=mRNA_H-paniculata_contig52063.12567.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2220bp|location=Sequence derived from alignment at H-paniculata_contig52063:11..1203+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |