prot_H-paniculata_contig5205.12564.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig5205.12564.1
Unique Nameprot_H-paniculata_contig5205.12564.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length203
Homology
BLAST of mRNA_H-paniculata_contig5205.12564.1 vs. uniprot
Match: D7FY58_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FY58_ECTSI)

HSP 1 Score: 275 bits (702), Expect = 2.500e-91
Identity = 145/207 (70.05%), Postives = 160/207 (77.29%), Query Frame = 0
Query:    1 MSDLPKWARTDEGEGAGAGDLGDKLVDEAGGEETKP-------AVPIPEADVAPSHHEPEDSGLASRTLCFFRMLAILTVLLALVVIGTNCYIIYDKFNSLKARGILLRVYGILFCVFVVLAEIEWARFTKYFGFLKYWPARGLFYVFVGLITWDQTGANTESDYGAYEDIISFLMMGVGVIYFFLGLACMRTVKEAERARLEEASA 200
            MSDLP WA+ + GE     DL DKLVDEA G   KP       A    E   A S H  EDSGLASR LCFFR LA+LTVLLALVVIGTNCYIIYDK+  +KARGILLRVYGILF +FV+ AE+EW++FTK+FGFLKYWPARGLFY+FVGLITWDQT A + S YG YEDI+SFLMM VG IYF LGLACMRTVKEAERARL + SA
Sbjct:    1 MSDLPNWAKGEGGEPKA--DLADKLVDEAAG--VKPEESADAAAAAATEPAAAGSDHAREDSGLASRALCFFRFLAVLTVLLALVVIGTNCYIIYDKYTEIKARGILLRVYGILFSIFVIFAELEWSKFTKFFGFLKYWPARGLFYIFVGLITWDQTDATSSSSYGTYEDIVSFLMMSVGGIYFLLGLACMRTVKEAERARLADESA 203          
BLAST of mRNA_H-paniculata_contig5205.12564.1 vs. uniprot
Match: A0A836C943_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C943_9STRA)

HSP 1 Score: 142 bits (357), Expect = 6.980e-39
Identity = 90/206 (43.69%), Postives = 120/206 (58.25%), Query Frame = 0
Query:    5 PKWARTDEGEGAGAGDLGDKLVDEA----GGEETKPAVPIPEADVAPS------HHEPEDSGLA-------SRTLCFFRMLAILTVLLALVVIGTNCYIIYD--KFNSLKARGILLRVYGILFCVFVVLAEIEWARFTKYFGFLKYWPARGLFYVFVGLITWDQTGANTESDYGAYEDIISFLMMGVGVIYFFLGLACMRTVKEAE 191
            P W + DE   AG GDL  KLVD+A    GG     + P P +   P+          +  G A       S+TLCFF+ L    +LL+L V+  N  IIY   K ++L+AR ++LR Y ILF   ++L EIEW  F + FGFL+ W ARGL Y FVGLITWDQ G++  + +GA    ++F+M+G G  Y  LG+ACM+TVKEAE
Sbjct:    3 PAWVK-DEPPAAG-GDLSQKLVDDAIEAPGGAPGHGSAPAPSSYSRPAGGGGRTSRRGKAKGRAAGGERPFSKTLCFFKALTAFIILLSLFVVVANVLIIYQDSKNDTLEARAVMLRGYAILFAAMIILTEIEWRGFMRLFGFLENWVARGLTYAFVGLITWDQ-GSDYGTVFGAINQTVAFMMIGAGAFYALLGMACMKTVKEAE 205          
BLAST of mRNA_H-paniculata_contig5205.12564.1 vs. uniprot
Match: A0A836CNQ0_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNQ0_9STRA)

HSP 1 Score: 85.5 bits (210), Expect = 4.510e-18
Identity = 40/97 (41.24%), Postives = 61/97 (62.89%), Query Frame = 0
Query:   92 NSLKARGILLRVYGILFCVFVVLAEIEWARFTKYFGFLKYWPARGLFYVFVGLITWDQTGANTESDYGAYEDIISFLMMGVGVIYFFLGLACMRTVK 188
            N+L      +RVY I+FC+ ++LAE+EW    K    L++WP RGL Y FVGL+T + +  N      A+  I  ++++GVGV+YFF+GLA +  V+
Sbjct:   19 NNLSHVEFAVRVYAIVFCIGIILAELEWPSIMKNAVLLRWWPVRGLLYTFVGLLTLEISDFNDNPVAEAFHYIFGWILVGVGVLYFFMGLARLHKVR 115          
BLAST of mRNA_H-paniculata_contig5205.12564.1 vs. uniprot
Match: D8LMH6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMH6_ECTSI)

HSP 1 Score: 80.9 bits (198), Expect = 1.080e-15
Identity = 45/138 (32.61%), Postives = 77/138 (55.80%), Query Frame = 0
Query:   67 MLAILTVLLALVVIGTNCYIIYDKFNSLKARGILLRVYGILFCVFVVLAEIEWARFTKYFGFLKYWPARGLFYVFVGLITW---DQTGANTESDYGAYEDIISFLMMGVGVIYFFLGLACMRTVKEAERARLEEASAH 201
            +L  +TV+ AL V G    ++      L    + +R Y ILFC+ +++AE+EW    +    L  W  RG+ Y FVG++     D+ G +    +G Y  II+++M+G+G +YF LGL C++ +++ + AR +   AH
Sbjct:   21 LLNAITVIAALGV-GVAQGMVLGYHKDLSPESVAVRCYNILFCMLIIMAELEWTTTVREMFVLHSWIPRGVVYSFVGVLVLEEEDEKGLDLGG-FGLYITIIAWIMVGIGALYFLLGLCCVKRIRDKKMARHKTLVAH 156          
BLAST of mRNA_H-paniculata_contig5205.12564.1 vs. uniprot
Match: A0A6H5JBP3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBP3_9PHAE)

HSP 1 Score: 80.9 bits (198), Expect = 3.280e-15
Identity = 45/139 (32.37%), Postives = 78/139 (56.12%), Query Frame = 0
Query:   67 MLAILTVLLALVV-IGTNCYIIYDKFNSLKARGILLRVYGILFCVFVVLAEIEWARFTKYFGFLKYWPARGLFYVFVGLITW---DQTGANTESDYGAYEDIISFLMMGVGVIYFFLGLACMRTVKEAERARLEEASAH 201
            +L  +TV+ AL V +     + Y K   L    + +R Y ILFC+ +++AE+EW    +    L  W  RG+ Y FVG++     D+ G +    +G Y  I++++M+G+G +YF LGL C++ +++ + AR +   AH
Sbjct:   76 LLNAITVIAALGVGVAQGMVLAYHK--DLSPESVAVRCYNILFCMLIIMAELEWTTTVREMFVLHSWIPRGVVYSFVGVLVLEEEDEKGLDLGG-FGLYITIVAWIMVGIGALYFLLGLCCVKRIRDKKMARHKTLVAH 211          
BLAST of mRNA_H-paniculata_contig5205.12564.1 vs. uniprot
Match: A0A7R9WMH7_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WMH7_9STRA)

HSP 1 Score: 71.6 bits (174), Expect = 8.270e-12
Identity = 49/159 (30.82%), Postives = 79/159 (49.69%), Query Frame = 0
Query:   54 DSGLASRTLCFFRMLAIL---TVLLALVVIGTNCYIIYDKFNSLKARGILLRVYGILFCVFVVLAEIEWARFTKYFGFLKYWPARGLFYVFVGLITWDQTGANTES--DYGAYEDI-------ISFLMMGVGVIYFFLGLACMRTVKEAERARLEEASA 200
            D+ +  R  C  ++  ++   TV++A ++       IY  F +L     +LRVY I  C  +V+ E+EW    +    L+ W  RGL Y FVG++  +Q  A+     D  A+ D+       +S +M+GVG +YF +G+ CM+ V    R   EE  A
Sbjct:   48 DAEMNPRRKCVHKVFVVINGITVIIATLMFVAQLLGIY--FKTLSLVDYVLRVYIIALCAMIVMNELEWTSVIRESRLLRNWLTRGLIYAFVGVLGIEQYEASPSGRHDDSAHFDVAMNFIRVVSNIMVGVGGLYFVMGICCMQLVSNKLRHEYEERVA 204          
BLAST of mRNA_H-paniculata_contig5205.12564.1 vs. uniprot
Match: A0A7S4E2R3_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4E2R3_9STRA)

HSP 1 Score: 69.7 bits (169), Expect = 4.990e-11
Identity = 45/148 (30.41%), Postives = 77/148 (52.03%), Query Frame = 0
Query:   53 EDSGLASRTLCFF--RMLAILTVLLALVVIGTNCYIIYDKFNSLKARGILLRVYGILFCVFVVLAEIEWAR-FTKYFGFLKYWPARGLFYVFVGLITWDQTGANTESDYGAYEDIISFLMMGVGVIYFFLGLACMRTVKEAERARLEE 197
            ED  + +   C +  R  + +T    L+V+  N   IY+   + +   I  R Y I+F   +++AE+ W R F +YF FL  W  +GLF +FV ++T D   +N   DYG  +   +  +  +G IY  LGL C+++ ++  +A L +
Sbjct:   30 EDDDVEASDACLWTLRGFSTVTAFAGLLVVVVNAIEIYEFQETPQIYAI--RAYAIVFGCMILMAEVNWPRLFLEYFRFLDVWAIKGLFILFVAVLTIDTKVSN---DYGTLQLATALAVGLLGFIYLCLGLMCVKSCRDMRKATLSK 172          
BLAST of mRNA_H-paniculata_contig5205.12564.1 vs. uniprot
Match: A0A7S3GVM0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GVM0_9STRA)

HSP 1 Score: 65.1 bits (157), Expect = 2.030e-9
Identity = 54/198 (27.27%), Postives = 85/198 (42.93%), Query Frame = 0
Query:    3 DLPKWARTD---EGEGAGAGDLG-DKLVDEAGGEETKPAVPIPEADVAPSHHEPEDSGLASRTLCF--------FRMLAILTVLLALVVIGTNCYIIYDKFNSLKARGILLRVYGILFCVFVVLAEIEWARFTKYFGFLKYWPARGLFYVFVGLITW---DQTGANTESDYGAYEDIISFLMMGVGVIYFFLGLACMR 185
            D P W   D   + +G  AG  G D    + GG + K  +     +  P   +  D    S   CF        F+   I   L  L     N Y+      ++K    ++R Y ++FC+ +V  E++W        FL +W  RGLFY F+G IT+   D   A  ++     EDI+ F++  +G+ Y  +G  CM+
Sbjct:   31 DAPSWLYEDTVPDHKGQQAGKAGQDTKTPKGGGVKWKQHI-----NTKPVEEDSGDVDSDSCCCCFSSDPMLFAFQCFHITAGLAGLGAFVANIYVFSRPHITVKEA--IIRGYSLIFCLLMVATELDWRYIVNKARFLDWWVLRGLFYTFIGFITFGLADHEAAPIDTP----EDIVGFIVFLIGICYILMGTFCMK 217          
BLAST of mRNA_H-paniculata_contig5205.12564.1 vs. uniprot
Match: A0A7S3LH58_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3LH58_9STRA)

HSP 1 Score: 64.7 bits (156), Expect = 2.730e-9
Identity = 42/144 (29.17%), Postives = 70/144 (48.61%), Query Frame = 0
Query:   64 FFRMLAILTVLLALVVIGTNCYIIYDKFNSLKARGILLRVYGILFCVFVVLAEIEWARFTKYFGFLKYWPARGLFYVFVGLITWDQTGANTESDYGA----------YEDIISFLMMGVGVIYFFLGLACMRTVKEAERARLEE 197
            FF M+A++T +   ++ G    II   +  L     +LR Y ++ C  V L E EW  F      L+ W  RGLFY F+G+I   Q     + D+            +  +++++M+G G++YF +G+AC++      R   EE
Sbjct:   52 FFNMIALMTGVCGFLM-GLG-QIIGMTYEDLDMISYVLRAYILVLCGLVALIEAEWTSFIINSSILRVWVTRGLFYAFIGVIGIQQNENVIDRDHNQRILNKSPSLQFIRVMAWIMVGCGILYFGMGVACLQIYYNRLRKDYEE 193          
BLAST of mRNA_H-paniculata_contig5205.12564.1 vs. uniprot
Match: A0A7S1UQU0_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1UQU0_9STRA)

HSP 1 Score: 63.2 bits (152), Expect = 6.800e-9
Identity = 34/95 (35.79%), Postives = 56/95 (58.95%), Query Frame = 0
Query:  101 LRVYGILFCVFVVLAEIEW-ARFTKYFGFLKYWPARGLFYVFVGLITWDQ---------TGANTESDYGA--YEDIISFLMMGVGVIYFFLGLAC 183
            LRVY ++ C  V++ E+EW  ++TK    LK+WP RG FY+F+G++  ++         TG +      A  Y  I+++LM+ VG++Y  +GL C
Sbjct:   58 LRVYVVIMCGLVIINELEWFPKWTKDAALLKFWPTRGAFYLFIGVLGLEENDVSPARANTGMSVVGRQAALNYIKIVAWLMVCVGLLYMTMGLFC 152          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5205.12564.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 13
Match NameE-valueIdentityDescription
D7FY58_ECTSI2.500e-9170.05Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836C943_9STRA6.980e-3943.69Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CNQ0_9STRA4.510e-1841.24Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
D8LMH6_ECTSI1.080e-1532.61Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JBP3_9PHAE3.280e-1532.37Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7R9WMH7_9STRA8.270e-1230.82Hypothetical protein n=1 Tax=Craspedostauros austr... [more]
A0A7S4E2R3_9STRA4.990e-1130.41Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S3GVM0_9STRA2.030e-927.27Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
A0A7S3LH58_9STRA2.730e-929.17Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]
A0A7S1UQU0_9STRA6.800e-935.79Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013714Golgi apparatus membrane protein TVP15PFAMPF08507COPI_assoccoord: 63..197
e-value: 5.5E-11
score: 42.6
NoneNo IPR availablePANTHERPTHR34965FAMILY NOT NAMEDcoord: 44..194
NoneNo IPR availablePANTHERPTHR34965:SF1coord: 44..194
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..67
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 164..184
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 121..131
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 100..120
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 132..152
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 68..88
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 89..99
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 153..163
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 185..202
NoneNo IPR availableTMHMMTMhelixcoord: 98..120
NoneNo IPR availableTMHMMTMhelixcoord: 164..183
NoneNo IPR availableTMHMMTMhelixcoord: 64..86

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5205contigH-paniculata_contig5205:2016..10100 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5205.12564.1mRNA_H-paniculata_contig5205.12564.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig5205 969..10400 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig5205.12564.1 ID=prot_H-paniculata_contig5205.12564.1|Name=mRNA_H-paniculata_contig5205.12564.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=203bp
MSDLPKWARTDEGEGAGAGDLGDKLVDEAGGEETKPAVPIPEADVAPSHH
EPEDSGLASRTLCFFRMLAILTVLLALVVIGTNCYIIYDKFNSLKARGIL
LRVYGILFCVFVVLAEIEWARFTKYFGFLKYWPARGLFYVFVGLITWDQT
GANTESDYGAYEDIISFLMMGVGVIYFFLGLACMRTVKEAERARLEEASA
HP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013714Golgi_TVP15