prot_H-paniculata_contig5204.12562.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig5204.12562.1
Unique Nameprot_H-paniculata_contig5204.12562.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length534
Homology
[Close]
BLAST of mRNA_H-paniculata_contig5204.12562.1 vs. uniprot
Match: D8LDB1_ECTSI (Putative Heat Shock transcription factor n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDB1_ECTSI)

HSP 1 Score: 160 bits (405), Expect = 6.030e-39
Identity = 80/104 (76.92%), Postives = 87/104 (83.65%), Query Frame = 0 
Query:   29 KRGKRGAPQTFAWKLFSILKA-----GTPIVGWSEAGDSFTVHNDKDFERDVLTANYRHGKFSSFQRQLNMYGFRKVADCSDRTYSHPFFRRDCPNLLVKVRRV 127
            K GKRGAPQTFA KLF++L+A     G+P V W   G+SFTVHNDKDFE  VLTANYRHGKFSSFQRQLNMYGFRKVADCSDRTYSHPFFRRD  +LL +VRRV
Sbjct:   33 KGGKRGAPQTFASKLFNVLQAAEGKKGSP-VSWCLEGNSFTVHNDKDFETQVLTANYRHGKFSSFQRQLNMYGFRKVADCSDRTYSHPFFRRDQSDLLAQVRRV 135
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BLAST of mRNA_H-paniculata_contig5204.12562.1 vs. uniprot
Match: A0A6H5KQ07_9PHAE (HSF_DOMAIN domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQ07_9PHAE)

HSP 1 Score: 160 bits (405), Expect = 2.190e-38
Identity = 80/104 (76.92%), Postives = 87/104 (83.65%), Query Frame = 0 
Query:   29 KRGKRGAPQTFAWKLFSILKA-----GTPIVGWSEAGDSFTVHNDKDFERDVLTANYRHGKFSSFQRQLNMYGFRKVADCSDRTYSHPFFRRDCPNLLVKVRRV 127
            K GKRGAPQTFA KLF++L+A     G+P V W   G+SFTVHNDKDFE  VLTANYRHGKFSSFQRQLNMYGFRKVADCSDRTYSHPFFRRD  +LL +VRRV
Sbjct:   32 KGGKRGAPQTFASKLFNVLQAAEGKKGSP-VSWCLEGNSFTVHNDKDFETQVLTANYRHGKFSSFQRQLNMYGFRKVADCSDRTYSHPFFRRDQSDLLAQVRRV 134
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BLAST of mRNA_H-paniculata_contig5204.12562.1 vs. uniprot
Match: A0A7S2BSE7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BSE7_9STRA)

HSP 1 Score: 99.4 bits (246), Expect = 4.890e-21
Identity = 51/114 (44.74%), Postives = 71/114 (62.28%), Query Frame = 0 
Query:   29 KRGKRGAPQTFAWKLFSILKAGTP-IVGWSEAGDSFTVHNDKDFERDVLTANYRHGKFSSFQRQLNMYGFRKVADCSD-RTYSHPFFRRDCPNLLVKVRRVNPKTGKSTATHKP 140
            + G+RGAPQ F  KL+ IL      I+GW+++G SF +   + F  ++L   +RH K+SSFQRQLN+YGFRKV   +D  +Y+H  F RD P LL KVRR+    G   +  +P
Sbjct:    5 RTGRRGAPQVFPRKLYEILSTEREDIIGWTDSGKSFIIKEMETFVTNILMKYFRHQKYSSFQRQLNLYGFRKVQKGTDVGSYAHECFIRDQPELLTKVRRIPQSAGAFPSQSQP 118
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BLAST of mRNA_H-paniculata_contig5204.12562.1 vs. uniprot
Match: A0A6H5KMN3_9PHAE (HSF_DOMAIN domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMN3_9PHAE)

HSP 1 Score: 106 bits (265), Expect = 1.270e-20
Identity = 59/120 (49.17%), Postives = 75/120 (62.50%), Query Frame = 0 
Query:   28 GKRGKRGAPQTFAWKLFSILKA-GTPIVGWSEAGDSFTVHNDKDFERDVLTANYRHGKFSSFQRQLNMYGFRKVADCSDRT-YSHPFFRRDCPNLLVKVRRVNPKTGKSTATHKPAAMTA 145
            G+ GKRGAPQ FA KL  IL    T  + W+  G +F VH+ + F  D+LT  YRH KFSSFQRQLN+Y FRK+   +D   Y+HP FRRD P+ L  VRR    +   +A ++PAA  A
Sbjct:   32 GRIGKRGAPQAFARKLAEILATESTATISWNANGSAFQVHDVERFSEDILTKYYRHSKFSSFQRQLNLYSFRKIVKGADAGGYAHPMFRRDRPDDLYHVRR----SISGSARYEPAAAAA 147
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BLAST of mRNA_H-paniculata_contig5204.12562.1 vs. uniprot
Match: A0A7R9YBQ9_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YBQ9_9STRA)

HSP 1 Score: 100 bits (250), Expect = 3.690e-19
Identity = 54/110 (49.09%), Postives = 71/110 (64.55%), Query Frame = 0 
Query:   29 KRGKRGAPQTFAWKLFSIL-KAGTPIVGWSEAGDSFTVHNDKDFERDVLTANYRHGKFSSFQRQLNMYGFRKVADCSDRT--YSHPFFRRDCPNLLVKVRRVNPKTGKST 135
            + GKRGAPQ F  KLF +L K  + ++ W E G+ F + +   F R+ L   ++H KF+SFQRQLN+YGFRK+A   +R   Y HP F+RD P  L KVRR  P+ GKST
Sbjct:   50 RTGKRGAPQVFPRKLFELLEKEDSAVIRWDEEGECFVIQDMDTFTRESLERYFKHHKFTSFQRQLNLYGFRKIAK-GERCGYYVHPHFQRDHPEWLSKVRRT-PQPGKST 157
[Close]
BLAST of mRNA_H-paniculata_contig5204.12562.1 vs. uniprot
Match: A0A6V1QFS1_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1QFS1_HETAK)

HSP 1 Score: 97.1 bits (240), Expect = 5.230e-18
Identity = 47/100 (47.00%), Postives = 69/100 (69.00%), Query Frame = 0 
Query:   29 KRGKRGAPQTFAWKLFSILKAGT-PIVGWSEAGDSFTVHNDKDFERDVLTANYRHGKFSSFQRQLNMYGFRKVADCSDR-TYSHPFFRRDCPNLLVKVRR 126
            + G+RGAPQ FA KL+ IL+     ++ W+ AG++F V +   F +++L   +RH KF+SFQRQLN+YGFRK+   SD  +Y+H +FR+  P+LL  VRR
Sbjct:    5 RTGQRGAPQAFARKLYEILEVEPGDLLSWNAAGNAFFVRDIDRFSKEILMKYFRHSKFASFQRQLNLYGFRKITRGSDAGSYAHQYFRKGKPDLLSLVRR 104
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BLAST of mRNA_H-paniculata_contig5204.12562.1 vs. uniprot
Match: A0A7S2R5C8_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R5C8_9STRA)

HSP 1 Score: 95.5 bits (236), Expect = 2.580e-17
Identity = 51/110 (46.36%), Postives = 67/110 (60.91%), Query Frame = 0 
Query:   29 KRGKRGAPQTFAWKLFSIL-KAGTPIVGWSEAGDSFTVHNDKDFERDVLTANYRHGKFSSFQRQLNMYGFRKVADCSDR-TYSHPFFRRDCPNLLVKVRRVNPKTGKSTA 136
            + GKRGAPQ F  KL+ IL       + W+E+G SF + + + F   VL   +RH KFSSFQRQLN+YGFRK++  ++   Y H FF RD  + L  VRR    TG+S A
Sbjct:   67 RTGKRGAPQVFPRKLYEILDNESEDTISWTESGHSFVIKDMETFVTSVLMKYFRHQKFSSFQRQLNLYGFRKISKGTETGAYCHEFFARDQTDKLRLVRRTPQVTGRSKA 176
[Close]
BLAST of mRNA_H-paniculata_contig5204.12562.1 vs. uniprot
Match: A0A7S2G7U9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G7U9_9STRA)

HSP 1 Score: 90.1 bits (222), Expect = 4.900e-17
Identity = 45/101 (44.55%), Postives = 63/101 (62.38%), Query Frame = 0 
Query:   29 KRGKRGAPQTFAWKLFSIL-KAGTPIVGWSEAGDSFTVHNDKDFERDVLTANYRHGKFSSFQRQLNMYGFRKVADCSDR-TYSHPFFRRDCPNLLVKVRRV 127
            + G+RGAPQ F  KL+ IL    + ++GW+ +G SF +   + F  ++L   +RH K+SSFQRQLN+YGFRK+    D   Y+H  F RD P  L  VRR+
Sbjct:   97 RTGRRGAPQVFPRKLYEILTNERSDVIGWTSSGKSFIILEMEIFVNEILMNYFRHQKYSSFQRQLNLYGFRKIQKGPDTGAYAHEHFLRDQPESLTFVRRM 197
[Close]
BLAST of mRNA_H-paniculata_contig5204.12562.1 vs. uniprot
Match: A0A7S2CXJ7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CXJ7_9STRA)

HSP 1 Score: 94.7 bits (234), Expect = 5.560e-17
Identity = 48/100 (48.00%), Postives = 63/100 (63.00%), Query Frame = 0 
Query:   29 KRGKRGAPQTFAWKLFSILKA-GTPIVGWSEAGDSFTVHNDKDFERDVLTANYRHGKFSSFQRQLNMYGFRKVADCSDR-TYSHPFFRRDCPNLLVKVRR 126
            + G+RGAPQ F  KL+ IL    + I+ W+E G SF +    DF  ++L   +RH K+SSFQRQLN+YGFRK+    D   Y+H  F RD  + LVKVRR
Sbjct:   75 RTGRRGAPQVFPRKLYEILTLESSDIISWTENGTSFVIQEMDDFVNEILMKYFRHRKYSSFQRQLNLYGFRKIQKGPDTGAYAHEGFLRDDESQLVKVRR 174
[Close]
BLAST of mRNA_H-paniculata_contig5204.12562.1 vs. uniprot
Match: D8LLB2_ECTSI (HSF_DOMAIN domain-containing protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLB2_ECTSI)

HSP 1 Score: 87.8 bits (216), Expect = 7.660e-17
Identity = 47/105 (44.76%), Postives = 63/105 (60.00%), Query Frame = 0 
Query:   30 RGKRGAPQTFAWKLFSILKAGTP-IVGWSEAGDSFTVHNDKDFERDVLTANYRHGKFSSFQRQLNMYGFRKVA--DCSDRTYSHPFFRRDCPNLLVKVRRVNPKT 131
            RG RGAP  F  KL+ IL    P I+ W + G SF + N +++   V+   YRH K +SFQRQLN+YGF+K    + +   Y HP+F+RD P +L  VRR  P T
Sbjct:    9 RGGRGAPSMFPRKLYQILCETDPEIITWDDDGKSFHIANYEEYIEGVMPLFYRHNKLTSFQRQLNLYGFKKRGRDEKNPGHYYHPYFQRDRPEILGGVRRSYPVT 113
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5204.12562.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LDB1_ECTSI6.030e-3976.92Putative Heat Shock transcription factor n=1 Tax=E... [more]
A0A6H5KQ07_9PHAE2.190e-3876.92HSF_DOMAIN domain-containing protein n=1 Tax=Ectoc... [more]
A0A7S2BSE7_9STRA4.890e-2144.74Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
A0A6H5KMN3_9PHAE1.270e-2049.17HSF_DOMAIN domain-containing protein n=1 Tax=Ectoc... [more]
A0A7R9YBQ9_9STRA3.690e-1949.09Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A6V1QFS1_HETAK5.230e-1847.00Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2R5C8_9STRA2.580e-1746.36Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2G7U9_9STRA4.900e-1744.55Hypothetical protein (Fragment) n=1 Tax=Florenciel... [more]
A0A7S2CXJ7_9STRA5.560e-1748.00Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
D8LLB2_ECTSI7.660e-1744.76HSF_DOMAIN domain-containing protein (Fragment) n=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000232Heat shock factor (HSF)-type, DNA-bindingSMARTSM00415hsfneu3coord: 35..127
e-value: 1.6E-21
score: 87.5
IPR000232Heat shock factor (HSF)-type, DNA-bindingPFAMPF00447HSF_DNA-bindcoord: 39..126
e-value: 2.6E-22
score: 79.2
IPR036388Winged helix-like DNA-binding domain superfamilyGENE3D1.10.10.10coord: 32..128
e-value: 5.2E-25
score: 89.7
NoneNo IPR availablePANTHERPTHR10015:SF206HEAT SHOCK FACTOR PROTEINcoord: 32..445
IPR027725Heat shock transcription factor familyPANTHERPTHR10015HEAT SHOCK TRANSCRIPTION FACTORcoord: 32..445
IPR036390Winged helix DNA-binding domain superfamilySUPERFAMILY46785"Winged helix" DNA-binding domaincoord: 36..126

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5204contigH-paniculata_contig5204:3126..12819 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5204.12562.1mRNA_H-paniculata_contig5204.12562.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig5204 2949..12819 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig5204.12562.1 ID=prot_H-paniculata_contig5204.12562.1|Name=mRNA_H-paniculata_contig5204.12562.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=534bp
MTRSARANGAGGGATAAAGSSSGGATTGKRGKRGAPQTFAWKLFSILKAG
TPIVGWSEAGDSFTVHNDKDFERDVLTANYRHGKFSSFQRQLNMYGFRKV
ADCSDRTYSHPFFRRDCPNLLVKVRRVNPKTGKSTATHKPAAMTAVEGTT
EDSLQSSTIAVAAAEAAVGKIGTDRDQSDVREHDHDDFGAETTGESEQGE
EETTPAARKKRRVSVTGPSAPLGSTAGSAAKARAAGNVGSSSSAAHRPLQ
YWIGGNAGVPGVPKAKPVAAAEAAAAARKQSKSAVLTTPADKQAKAQARA
QARAQAKLGGNGKSKGSNGALSRREVGGGGGGGGMVLLPQQTEGSKQYWK
LNQHKFSVGGSGVASSWTTNPNSCSSPSTSSAASSIDSSPTLLPSRVGGG
GSGGGCMPKMARGGAQGKPKARPQNISSSTVPPSPVGSSAIASSGGSGGI
DGYWRRAYEPDDNRGNVLSAASQSSHTADCTQAMNSPGFYYGAWSGGGGG
GGANVTSSGAPGDCRAESAQDQSQFWLDKAFGFG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000232HSF_DNA-bd
IPR036388WH-like_DNA-bd_sf
IPR027725HSF_fam
IPR036390WH_DNA-bd_sf