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Homology
BLAST of mRNA_H-paniculata_contig5204.12562.1 vs. uniprot
Match: D8LDB1_ECTSI (Putative Heat Shock transcription factor n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDB1_ECTSI) HSP 1 Score: 160 bits (405), Expect = 1.460e-38 Identity = 80/104 (76.92%), Postives = 87/104 (83.65%), Query Frame = 1
Query: 262 KRGKRGAPQTFAWKLFSILKA-----GTPIVGWSEAGDSFTVHNDKDFERDVLTANYRHGKFSSFQRQLNMYGFRKVADCSDRTYSHPFFRRDCPNLLVKVRRV 558
K GKRGAPQTFA KLF++L+A G+P V W G+SFTVHNDKDFE VLTANYRHGKFSSFQRQLNMYGFRKVADCSDRTYSHPFFRRD +LL +VRRV
Sbjct: 33 KGGKRGAPQTFASKLFNVLQAAEGKKGSP-VSWCLEGNSFTVHNDKDFETQVLTANYRHGKFSSFQRQLNMYGFRKVADCSDRTYSHPFFRRDQSDLLAQVRRV 135
BLAST of mRNA_H-paniculata_contig5204.12562.1 vs. uniprot
Match: A0A6H5KQ07_9PHAE (HSF_DOMAIN domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQ07_9PHAE) HSP 1 Score: 160 bits (405), Expect = 5.420e-38 Identity = 80/104 (76.92%), Postives = 87/104 (83.65%), Query Frame = 1
Query: 262 KRGKRGAPQTFAWKLFSILKA-----GTPIVGWSEAGDSFTVHNDKDFERDVLTANYRHGKFSSFQRQLNMYGFRKVADCSDRTYSHPFFRRDCPNLLVKVRRV 558
K GKRGAPQTFA KLF++L+A G+P V W G+SFTVHNDKDFE VLTANYRHGKFSSFQRQLNMYGFRKVADCSDRTYSHPFFRRD +LL +VRRV
Sbjct: 32 KGGKRGAPQTFASKLFNVLQAAEGKKGSP-VSWCLEGNSFTVHNDKDFETQVLTANYRHGKFSSFQRQLNMYGFRKVADCSDRTYSHPFFRRDQSDLLAQVRRV 134
BLAST of mRNA_H-paniculata_contig5204.12562.1 vs. uniprot
Match: A0A7S2BSE7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BSE7_9STRA) HSP 1 Score: 99.4 bits (246), Expect = 6.020e-21 Identity = 51/114 (44.74%), Postives = 71/114 (62.28%), Query Frame = 1
Query: 262 KRGKRGAPQTFAWKLFSILKAGTP-IVGWSEAGDSFTVHNDKDFERDVLTANYRHGKFSSFQRQLNMYGFRKVADCSD-RTYSHPFFRRDCPNLLVKVRRVNPKTGKSTATHKP 597
+ G+RGAPQ F KL+ IL I+GW+++G SF + + F ++L +RH K+SSFQRQLN+YGFRKV +D +Y+H F RD P LL KVRR+ G + +P
Sbjct: 5 RTGRRGAPQVFPRKLYEILSTEREDIIGWTDSGKSFIIKEMETFVTNILMKYFRHQKYSSFQRQLNLYGFRKVQKGTDVGSYAHECFIRDQPELLTKVRRIPQSAGAFPSQSQP 118
BLAST of mRNA_H-paniculata_contig5204.12562.1 vs. uniprot
Match: A0A6H5KMN3_9PHAE (HSF_DOMAIN domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMN3_9PHAE) HSP 1 Score: 106 bits (265), Expect = 1.880e-20 Identity = 59/120 (49.17%), Postives = 75/120 (62.50%), Query Frame = 1
Query: 259 GKRGKRGAPQTFAWKLFSILKA-GTPIVGWSEAGDSFTVHNDKDFERDVLTANYRHGKFSSFQRQLNMYGFRKVADCSDRT-YSHPFFRRDCPNLLVKVRRVNPKTGKSTATHKPAAMTA 612
G+ GKRGAPQ FA KL IL T + W+ G +F VH+ + F D+LT YRH KFSSFQRQLN+Y FRK+ +D Y+HP FRRD P+ L VRR + +A ++PAA A
Sbjct: 32 GRIGKRGAPQAFARKLAEILATESTATISWNANGSAFQVHDVERFSEDILTKYYRHSKFSSFQRQLNLYSFRKIVKGADAGGYAHPMFRRDRPDDLYHVRR----SISGSARYEPAAAAA 147
BLAST of mRNA_H-paniculata_contig5204.12562.1 vs. uniprot
Match: A0A7R9YBQ9_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YBQ9_9STRA) HSP 1 Score: 100 bits (250), Expect = 4.930e-19 Identity = 54/110 (49.09%), Postives = 71/110 (64.55%), Query Frame = 1
Query: 262 KRGKRGAPQTFAWKLFSIL-KAGTPIVGWSEAGDSFTVHNDKDFERDVLTANYRHGKFSSFQRQLNMYGFRKVADCSDRT--YSHPFFRRDCPNLLVKVRRVNPKTGKST 582
+ GKRGAPQ F KLF +L K + ++ W E G+ F + + F R+ L ++H KF+SFQRQLN+YGFRK+A +R Y HP F+RD P L KVRR P+ GKST
Sbjct: 50 RTGKRGAPQVFPRKLFELLEKEDSAVIRWDEEGECFVIQDMDTFTRESLERYFKHHKFTSFQRQLNLYGFRKIAK-GERCGYYVHPHFQRDHPEWLSKVRRT-PQPGKST 157
BLAST of mRNA_H-paniculata_contig5204.12562.1 vs. uniprot
Match: A0A6V1QFS1_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1QFS1_HETAK) HSP 1 Score: 97.1 bits (240), Expect = 6.760e-18 Identity = 47/100 (47.00%), Postives = 69/100 (69.00%), Query Frame = 1
Query: 262 KRGKRGAPQTFAWKLFSILKAGT-PIVGWSEAGDSFTVHNDKDFERDVLTANYRHGKFSSFQRQLNMYGFRKVADCSDR-TYSHPFFRRDCPNLLVKVRR 555
+ G+RGAPQ FA KL+ IL+ ++ W+ AG++F V + F +++L +RH KF+SFQRQLN+YGFRK+ SD +Y+H +FR+ P+LL VRR
Sbjct: 5 RTGQRGAPQAFARKLYEILEVEPGDLLSWNAAGNAFFVRDIDRFSKEILMKYFRHSKFASFQRQLNLYGFRKITRGSDAGSYAHQYFRKGKPDLLSLVRR 104
BLAST of mRNA_H-paniculata_contig5204.12562.1 vs. uniprot
Match: A0A7S2R5C8_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R5C8_9STRA) HSP 1 Score: 95.5 bits (236), Expect = 3.370e-17 Identity = 51/110 (46.36%), Postives = 67/110 (60.91%), Query Frame = 1
Query: 262 KRGKRGAPQTFAWKLFSIL-KAGTPIVGWSEAGDSFTVHNDKDFERDVLTANYRHGKFSSFQRQLNMYGFRKVADCSDR-TYSHPFFRRDCPNLLVKVRRVNPKTGKSTA 585
+ GKRGAPQ F KL+ IL + W+E+G SF + + + F VL +RH KFSSFQRQLN+YGFRK++ ++ Y H FF RD + L VRR TG+S A
Sbjct: 67 RTGKRGAPQVFPRKLYEILDNESEDTISWTESGHSFVIKDMETFVTSVLMKYFRHQKFSSFQRQLNLYGFRKISKGTETGAYCHEFFARDQTDKLRLVRRTPQVTGRSKA 176
BLAST of mRNA_H-paniculata_contig5204.12562.1 vs. uniprot
Match: A0A7S2G7U9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G7U9_9STRA) HSP 1 Score: 90.1 bits (222), Expect = 5.790e-17 Identity = 45/101 (44.55%), Postives = 63/101 (62.38%), Query Frame = 1
Query: 262 KRGKRGAPQTFAWKLFSIL-KAGTPIVGWSEAGDSFTVHNDKDFERDVLTANYRHGKFSSFQRQLNMYGFRKVADCSDR-TYSHPFFRRDCPNLLVKVRRV 558
+ G+RGAPQ F KL+ IL + ++GW+ +G SF + + F ++L +RH K+SSFQRQLN+YGFRK+ D Y+H F RD P L VRR+
Sbjct: 97 RTGRRGAPQVFPRKLYEILTNERSDVIGWTSSGKSFIILEMEIFVNEILMNYFRHQKYSSFQRQLNLYGFRKIQKGPDTGAYAHEHFLRDQPESLTFVRRM 197
BLAST of mRNA_H-paniculata_contig5204.12562.1 vs. uniprot
Match: A0A7S2CXJ7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CXJ7_9STRA) HSP 1 Score: 94.7 bits (234), Expect = 7.340e-17 Identity = 48/100 (48.00%), Postives = 63/100 (63.00%), Query Frame = 1
Query: 262 KRGKRGAPQTFAWKLFSILKA-GTPIVGWSEAGDSFTVHNDKDFERDVLTANYRHGKFSSFQRQLNMYGFRKVADCSDR-TYSHPFFRRDCPNLLVKVRR 555
+ G+RGAPQ F KL+ IL + I+ W+E G SF + DF ++L +RH K+SSFQRQLN+YGFRK+ D Y+H F RD + LVKVRR
Sbjct: 75 RTGRRGAPQVFPRKLYEILTLESSDIISWTENGTSFVIQEMDDFVNEILMKYFRHRKYSSFQRQLNLYGFRKIQKGPDTGAYAHEGFLRDDESQLVKVRR 174
BLAST of mRNA_H-paniculata_contig5204.12562.1 vs. uniprot
Match: D8LLB2_ECTSI (HSF_DOMAIN domain-containing protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLB2_ECTSI) HSP 1 Score: 87.8 bits (216), Expect = 8.880e-17 Identity = 47/105 (44.76%), Postives = 63/105 (60.00%), Query Frame = 1
Query: 265 RGKRGAPQTFAWKLFSILKAGTP-IVGWSEAGDSFTVHNDKDFERDVLTANYRHGKFSSFQRQLNMYGFRKVA--DCSDRTYSHPFFRRDCPNLLVKVRRVNPKT 570
RG RGAP F KL+ IL P I+ W + G SF + N +++ V+ YRH K +SFQRQLN+YGF+K + + Y HP+F+RD P +L VRR P T
Sbjct: 9 RGGRGAPSMFPRKLYQILCETDPEIITWDDDGKSFHIANYEEYIEGVMPLFYRHNKLTSFQRQLNLYGFKKRGRDEKNPGHYYHPYFQRDRPEILGGVRRSYPVT 113
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Taxonomic scope | Opisthokonta |
| Seed ortholog score | 89.0 |
| Seed ortholog evalue | 7.4e-15 |
| Seed eggNOG ortholog | 28583.AMAG_06269T0 |
| Preferred name | SFL1 |
| Hectar predicted targeting category | other localisation |
| GOs | GO:0000122,GO:0000128,GO:0000228,GO:0000976,GO:0000977,GO:0000978,GO:0000987,GO:0001012,GO:0001067,GO:0001085,GO:0001103,GO:0001558,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005694,GO:0006355,GO:0006357,GO:0008134,GO:0008150,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009987,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010570,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0016458,GO:0019219,GO:0019222,GO:0030308,GO:0030447,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031974,GO:0031981,GO:0035690,GO:0040007,GO:0040008,GO:0042221,GO:0042493,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043565,GO:0044182,GO:0044212,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0045892,GO:0045893,GO:0045926,GO:0045934,GO:0045935,GO:0045944,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0050896,GO:0051128,GO:0051171,GO:0051172,GO:0051173,GO:0051252,GO:0051253,GO:0051254,GO:0051704,GO:0051716,GO:0060255,GO:0060258,GO:0065007,GO:0070013,GO:0070491,GO:0070784,GO:0070785,GO:0070887,GO:0080090,GO:0097159,GO:0098630,GO:0098743,GO:1900428,GO:1900429,GO:1900460,GO:1900462,GO:1901363,GO:1902679,GO:1902680,GO:1903506,GO:1903507,GO:1903508,GO:1990837,GO:2000112,GO:2000113,GO:2000217,GO:2000218,GO:2000220,GO:2000221,GO:2001141 |
| EggNOG free text desc. | negative regulation of filamentous growth of a population of unicellular organisms |
| EggNOG OGs | 39VVJ@33154,COG5169@1,KOG0627@2759 |
| Ec32 ortholog description | Heat Shock transcription factor |
| Ec32 ortholog | Ec-25_001880.1 |
| COG Functional cat. | K |
| Best tax level | Opisthokonta |
| Best eggNOG OG | NA|NA|NA |
| Exons | 2 |
| Model size | 1779 |
| Cds size | 1602 |
| Stop | 0 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig5204.12562.1 >prot_H-paniculata_contig5204.12562.1 ID=prot_H-paniculata_contig5204.12562.1|Name=mRNA_H-paniculata_contig5204.12562.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=534bp
MTRSARANGAGGGATAAAGSSSGGATTGKRGKRGAPQTFAWKLFSILKAG
TPIVGWSEAGDSFTVHNDKDFERDVLTANYRHGKFSSFQRQLNMYGFRKV
ADCSDRTYSHPFFRRDCPNLLVKVRRVNPKTGKSTATHKPAAMTAVEGTT
EDSLQSSTIAVAAAEAAVGKIGTDRDQSDVREHDHDDFGAETTGESEQGE
EETTPAARKKRRVSVTGPSAPLGSTAGSAAKARAAGNVGSSSSAAHRPLQ
YWIGGNAGVPGVPKAKPVAAAEAAAAARKQSKSAVLTTPADKQAKAQARA
QARAQAKLGGNGKSKGSNGALSRREVGGGGGGGGMVLLPQQTEGSKQYWK
LNQHKFSVGGSGVASSWTTNPNSCSSPSTSSAASSIDSSPTLLPSRVGGG
GSGGGCMPKMARGGAQGKPKARPQNISSSTVPPSPVGSSAIASSGGSGGI
DGYWRRAYEPDDNRGNVLSAASQSSHTADCTQAMNSPGFYYGAWSGGGGG
GGANVTSSGAPGDCRAESAQDQSQFWLDKAFGFG back to topmRNA from alignment at H-paniculata_contig5204:2949..12819+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig5204.12562.1 ID=mRNA_H-paniculata_contig5204.12562.1|Name=mRNA_H-paniculata_contig5204.12562.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=9871bp|location=Sequence derived from alignment at H-paniculata_contig5204:2949..12819+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
AAAGAGAGAAAGACGGAAAAGAGAGGGGCCACATCACATTATATAACTAA
CCACCCCAGCCCTGCAGCTGCAAAATTTGGGAGGTGGTGCGCACACAAAG
CTGACGGAGTGTGGCCGGCGCACATCTTTGTCTCGCCGCTGTAGTTGAGC
TTCAAGGGCTAGGCTTTTTTATTTATCATGACACGCTCTGCGCGAGCGAA
TGGCGCGGGTGGGGGAGCGACAGCAGCAGCTGGCAGCAGCAGCGGCGGGG
CTACAACTGGTAAACGAGGGAAACGAGGCGCCCCTCAGACGTTTGCGTGG
AAGCTGTTCAGCATCCTCAAAGCAGGCACGCCCATCGTGGGTTGGAGTGA
AGCAGGTACGCCGCGGATTAGAAAGTGAAGGGGGAAAGTTCCAATCGCCG
CATGTGTTGTATACTCCCTCCTCTTCCTCTCCCCTCTCTCCCCACTGTCT
TGTCCTGTCTTGTATAACTCTGGGCTTGTAGACTCGATTTGCCTACTGTT
TTCGGTTTAATATATATGTATGTAATTTTTTTTCACACCATCCCATCAAA
ATTCGCTACTACACATCTATTACTACTTTTTCCTTTTCTCTCTACTCTTT
TGATCTCACACAAGATAGGTGTATTTCACTGTGTGTTTTTCGACAATTTC
TCGAAGTAGGCACCAGCTTCGCGCCTGCCTTACTTCGCTCACTTCCGGCG
TCAACGTTAGAGCTTGAATCAATGCGAAGGCTTGGTCTGAGTTGTAAATC
TATTGGTCGACATACGCGGACAGACGGTCCTCTGTTGGTGGGCATTTATG
CCAAAGGTCGCCCCTTCTAGACTGAAAATTGAAAGCGGCCCTTTACAAGT
TGTGTTGGTGCACATGGGTCGCGTGCCGATACAAATCCCGCAAGATGCTA
CACGCAGATTAAGTAGCATCTTCCAGCGTTGGACCAGCTCTCACATGTAG
CATGGCACGGCTGTGCAGTACAAGGTCGCGTGTGGGGTTGAATGCTTTAG
CTCTGGCGCGCGTGCGGGGGCCGCATGTAGTGAAGATGGCACTCTGACTT
CGCTATATTTTGTTGGTCCGCCCCCGTCATGTTGTATGTAATTATGTATT
TTGGGACCAACAACTTATCGTCCGGTTCATGAGAGAGATAAAGACTGATA
TTGAGACCCAAGAGGAGAGTAGGGGTTACTTGAACGCGATATGCCGTTCG
CCATACCATGCACTTACTAACGGCTGGATTTCCCGAAGACAGGGCCCTAT
CGTGTCGTCAACACACGAGACTCTCGTGATCCTGTTCTCACGTGTTAGTA
GCGGGTGGAGGTCAACCCCAAGCGTCTTGAATTTGGAACCCGGTCACAAT
TGCCGTGAAGAAATCGCACTTTCACGTTGTGTGTAATGTATTTCGGGATA
GATGACCGAAAAATATTGTGCGTATATAATATATCAATTATCCGTGCAGA
CGCGGATTTTGTTTTATCACTCCGATGCTGCATGGGATTCGAGTTCGTAC
GGATGTATCCTAGGTTTTTGTTTAAATGGGCTGTGCTATATTGTGGAAAG
TGGTTTCCTCCGCGACCCGTTCGCGATGCAGCTCGGGCAGGCGGGCAATC
TGGTCAGTGGCTTCCCGCCCAAACCCATCAGCTGTGGGGTCCTCCGCGAT
CGTTGTTGTAAAGTATCATGGTGACAAAAGCTGGTGCACAGATGAGACTT
GTATGGAGTGTCAGTTTCAGTTACTCCAATTGCAGTAACATCATATATTG
CAAATTGCGAAGAGGTCTGTGTTATTTTTGTACTACTGTCCATCCCCCAC
GTTCACGACACTGATTGCTAATACCATCTTGTATTATCCCCCAGTGCGCA
CAAAAAATAGTACACAGACTACCCTCACTCAGAGTATGTTCAATTTTTGG
GAGAACTAAACTCCCTAGGCACCAAGCATAGCCCGTGCAGGTGTGGAAGG
AGCGCGGGCATACAGGGGAAAGTCGGCAAGACTTACGGAAGTTGCATACG
CATCAGCACGTGCCGACATAGAACACAAGCACCCACGTTTCATCACCACT
GGACGGTACTCTGTACCACTACCTGTGTACTTCCTGTGGTCGGTTGGTCG
AGGTGGAACAACTTTAATCTGAAACTATGATGTCATCGGCACATTCGAGT
CAAACATGAGGTGGTTGCGCGGAGGCCAACTCTTATACCTTCTCGATGAT
ATTGTCCACTCACACCTACAGGGGGCAACGACCTCAACTGGATGTCCATA
AAAACATTTCTCAAGCAGACACCTTAGGGGAATCAGACCCTCATCGTTGT
TGAACCTGTGTGTGGAACGTACATGAAATAATACTTGATATCGCCTTTTA
TCACGGGATTTTGAGAATTGGGCTGGATGGCCACTTTCCCAAATCCTGAA
TCTTTATATCAAACTGTACTTGAATGGTGCCACGTGTCCTTCAAGGACTG
CCCTCTCTGGCTGGTTCATATGAGTATTTCCCCAAAAAACTCCGCACCCT
TCCTGCATGCCTGATTCGTACATCGGCTGGTTTCTTTGGACACATGCGCT
GATCACTTGTGCCGATTGCCGCACAGACCGCAGGGACCGCTCTGAGAGTA
ATTCCCTCGGGTCACGAAAAAACTTGCTCTCGTACAATAAACTGGTACTC
GGCATCGGAGTGATGATCTGTACCCTATATATGCTAGTAATACAACTTTG
AGGATACAACTTGCCGCTGGTGTGCCCGAGATTCTCCGCACCTGCCTTGC
AGATGACTGAACCCCGCTTCTCCTCGTACGGGTTGTCAGAAAGTGTTAAA
TGTAAAAATCGCTGCCACATGTGTATGTTCGTATTGGGGTCCCTAGCTCC
CCTACGCCTTACGACAGGTTTTTACTTGCGGCGTAGTTTTCTTGGAGCTG
ACGTGCTCGTTGTTCATTATCCATTGTTTGCGGACAGTCAGGTAGTACAT
CTGCAGTGCGGCTGTTATTTTTGAGATATTGTGGATAAGCAGTATCGTAT
TCGTGTGACCACACATCGCTTCCCCGGCTCATGTTCATCATTTGAGTCCT
CGATGTGCCCTCTTGATGGGTTGTTGGCTTGTACATGTGCACCGCTGTTT
TTTGCGCAGTGCGCGTTGTTTTCGCTTGCCTGGATGGCCACCCCACGGGC
GTGTCTTCTTTCCCTCTGAAGCTCCCACATACAAGTGCCAGCGTGTGTGT
CCCGGGATACGTTAACCTGCCCAAGTTTCTGGGAAACATGCTCGGGGAGT
CCTTATTGCGTCCAAGTCAAACAGGATGTGGAGGATCGACTGTAGAATAA
CCCCATACAAACCGATCTATAGTATAACAGTAACTAACTGGTAGATACAT
GTGCCCGTTGTTCCTAGACGTTCCGTCTGCGTGACGCATCACGTTACACC
GGTCCCTCTGCAGGTGTGTGCATTGAGTGAAGGTCAACCACCTTTTTTTT
TCGGTTCCATTTTCGACTATAAATATTGGTTTCAACTAAAGACACCGCAA
ACAAATCTTTTAATGTTGTTTTGGTGAATTGCGTCCGAGTAACGTTTTCA
AGGCCAGGAAAAATGCAGTGTCGGTTACTGCCTGAAGGTCGCTGCTGAAT
TCTCGGCGAGGTATTAAGGAGCGCTTACCCACTTAACCTCTACCCCTTGG
CTATGCAATTCTAGTGAAATGTACGCATCGGCAATGCATGGTAGGGTCTG
CTGGTTCGAACTCAGGGTTAGGGATATTGTTGTTATAGTGGGGCTCAGTT
CCGGAAGCTGCGGCAGCTGTCGGGACCTACATGAAGATCCAAAATTGTAT
TTTTCACCAGAGCTTACAAAGTTGGATAGGAGAGCGCGACTTATTTACGC
TCAAGAGGAAGTACAGGGATGTACGCAGGAGAATATCTGATTCATCAGGC
GTTGACTGGGTCGTATTGGCGCCATCTTTATAACATGTCTACCGGTGTGG
CACCATTTGGACTGTAGTGAGGCAATTACACCCATATCAAATTTTTTGTG
TTTCGATAACATCACGCCATGCTCATCCGTCTCCGTCAATGATGAGGAAT
ACCCCTTCTCTTGGGGAACACTACTGTGAGTGGCTGTACCCCATTTTCTA
TCTCTTGAAGTGATGTCCTATTTTTAATAAGAGGTACTAACAAGTCAGCG
GAGCGAGTCCTTCGTACAGATCAAAATAGGAACCGAAAACAACAAATGGT
ATTCAAGCGGTTTTTGCCATGTGATATACTTTGTACTGTGCTCGTTTCAG
TATGCCCACAAGCAGAAATACGATGGGTGACGTACCTAGCTGTGATGTAA
CCTATTTTCTATCGCAAAGACATCTCCTGAAAACAGATCTGTTGAAACTA
GATAGCAGAGAATTACTTGCAGAAAGGTCGAGGCTGGATTTAGGGCTGAA
ATGCCCTGTTTATGGATCCAATGGTGTACGCTGCGTTCGGAACCGAAAAG
AGCTCTCACCCTTGACGTGGGGCGTCAGAGAGTATTTCAGGCCAAAATAA
CTAATGTAATCTTTTCCCGTCTACGCCTCTTTTTGGGGGTGGCTCTTTGA
ACAGCTGGGCTTCCTTTTTATGTTATCCCTGTAATCATCAATACATTATA
CCTGGGTGCTGTGTCTAATGTTCTCAGGTGTGGATTTGACAGAAACGGCA
ACCCAAAGGTTGTATGAACCTCGGTCGATTCGAATCTCCTTCTTGGAGCT
CATTAAAAATATGAATGATATTCATCCTTTTTTGGTGCTGGCGGAATGAA
AAGAAGACCCGTAATTGCTCCATTGCATATCTCGTCGTGATTTCGAAAGT
TGTTCTCACAACTAACTTCAATTCTGTTTTCCCTCAGAGCTTGTCTACAT
AATATTGGCGCCATTTTCGGACCTTTCCCCCTCCACTCTTGTCCTGCCCG
TCTGACATGGCTGTCGAAATTTTCGTCCTAATTTTCATACTATGCACTAT
GTCCCAGTCTAGTTCTGGTGTTTTGTCTCTTTTTAACTATGTCCTAGTTC
TGCCGTTTTCGCCTGTCTTGCAGAGGGTTGTAAGTCGTAAATATCTAAAC
CCTCTCAAGGGCTTGTCTTCCTGGGAAACAAAATTTGCTTTTGGGGAAAA
TGGTTTTGTTTTCCCGGCCTGTGATTGGCTGCGAAGATTCTTTAACATTT
CGAAAATCCGCGAAGTTTTTCTCGGATATTTCCAATCTCGCATCGGATGG
AGGGTCCGGAGTCGTTTTAGAAAAGTGCCCGTCTATTATCGAGGGAATCT
GGGGCCAGGAGCCCGAAAGGGTGTCTGCAGGGGAATATAATAGCGACCAA
AGCGAGGGGAATGGTGGCATAGGGTCCTGTGCCCTGTTTTGTCCTGCTCC
CTTGCGCGCTTATTGAAGCACCATCCTAATACGCCCTGTTGCACGCACAA
TGGCGTCCTACGGCGAACCCGTCGAGCGACGTGGTGTGAAGCGTGAACAA
CCATTTTCAACGCCTGACGTGGTAAGCAACGACACGAAGCAGGGGAACGA
GTTGTCCCTGATTGTGGGCTCCATGTACTCGCATCATGAACGCCGTTTGC
GATACAAGAGTGGGGTGCGCCTCTCGATCTCTGAGGTTCATGTGCGTAGC
TCTTCCAGTGTGGTTACGGCACAGAGGAGACCTACCGACACCACCAGCTG
TTGCATCATGTTCTTGATCTTGATCGGTGCTCGTCTGCGGGCAGACAGTC
TGGTGTTGCCGCTGTGAATTGTCCGCATCGGCGGGTTTTATGCCTGTCTT
TTCACCTGTCTGTACAGTCTGTAGAATATGTGCTTCGTGATGGGTGCCCT
GTCATCACTGGCGGGAATTAAGGGGTCGCTGGCCGCTGCCAAAGTCATTT
TCTCCTACATTCATTTGGACTTTGTTTGGACTGAAAAGAAGAAGGTGTCG
AGGGAAAATTACCCTGATTCCTTCTGTCAATGCCGTTTTTCGAACGCAGA
CAAGCGTCCAAGTACGAAAGCAAAACTACCGAAGGTCGAATCATGACCTT
GATATCGGAGTACGATGAGGAAAATGTGGGCCCAAATTAGTTCGGGCAAA
TTCACGTTATTTGTCCGCTTTCCGGAACTAAACTAGAGTTGATGAACTTT
GCTCACGTCCGACCAAACAATACACAGACTGATCTAATATACAGGCGTAA
GGAAACTGTTCTGTTACACATTACAGATAATCCATGCAGATGTGTTGATT
TTCTCCAAATGAAAATCCTTGTGACTACTCTGTTCGATTAGCCAGGAACG
TCTTACCGTGTTTGTCACGGAGTTCTACAGCGATGAACAGCTGTCGTGTG
CGACGTTTACCTAACACCAAAAGCTCAAACTTGAAGAAGTCGATTTGTCG
GACATTGGAAATTTTGCACTGGATAGCCATGAGTGACCGAGTTCGGTGTA
CGTTTGCGTTCGCACATGTTTTCAAACAAAAAATCCTAGACTCTTTTCGG
TATTGCTGCCGCTGTGGTCACTGTAGTGCATAAGTAATCATCGGATATTT
TAAATCCCGCAACGTGATTTCTTCTTTTTCTTAGGGGCACGAGCATACTC
AGCTGTGCACATGCGTTCCTCGTTCAATTCTCAAGGACGTGACGGTTTGG
TGTGTTATCGTTTCGCTGTATTTTTGTGGGTTCACCGGTCCCAATGCCAT
GTACGGTAATACTTCGAGGTGCTAGAACTTGAGAAAACCGAGAAAAATAG
TGCGCAGAGAGAAACCGGACGGAAGTGGACGACCTCGCGTGTTTTTTCAC
CAGCGAGTGTTCCAAATTTACCTTTAAAACGTAAAATAAATGGTGTTACC
AAGCTGAGAAGAAACAATGTTTTTCCCCTTCGCTGAATCATGCTACGTTG
GAGATGAGCTGTCGCTTTCCTCTGTTGGGTTTGATCACACTGAATTTTGG
AGCTGAGACCAGGATTTTTGCTCATGTGTTTTTCTACTTATTGACTAGGT
CTTCCTATTTAGAGTATTCGAGGTCTCGTACCGTAGTTTCGCCTCTGTCA
TGACTCCTCCGTGGTCTTGGGGTGCTAAGCGAAACTACGAAAGGCCGAAA
TATGCATCAATATATATATATATATTGATGGAGGGAATTTTTTATTTCCA
AGAGGCACAACGCCGAATTACCAATTGTTGACTACGCCATCACCCGTGTC
ATGTTCTGATGGTAACATTACATGTAAGAGGACGGCATAAACGCGGCAGA
TGTCGCTCGCAAAGAAATTCTCAGCAAATGTTAGTGCCGGCACCGCAGGA
TCACCGAGCAGATGGATATAGTTGTGCAGCTAGTTCAGACAGTACACCAA
TTGTACTCTCATATCATCCTGACTTTATTTCTTCTGTGACCGAGTGTAAC
TGCTGACTGTATCATGCTGTTTGCACTTTCCAGACGGCTATCACTGCTCC
ATTTAACCAACGTTTGTTGTGCAGTTTATCGGCTGTATAACTTCCACGTC
AACTGCCAAGGATATAGCGTTGCGGTTTGAGCACACTTGCCGTCGATAAA
CAACGGTGTTGCCGTGAAATGGTGGACTTTGACCCCTTTTGCTCCTGGCG
TCACATGATTGTACGTTAGTTCTATTGCGGAGGCACATCGTCAATAAGAC
CAAGTTTTTGCTCTTTCGCACCATGTCCCCCCATTCAACTAGGTGTATCT
CCACAATCAAGGGGTTAAATCGAAAACCCAAAGGTGTGTGCAGACCGCAT
GATTAAGACGGTTCCGGAGGTTGGGTGAGCGGCATTAGCTCAGACTTTCG
CCTCCGATTAGAGCAACACTTTGGACCTCTTGACGATATGCCTCCATAAT
ATGTATTAAGAGTATATAGTTTATTTTTGTCACATGATTCCATTCATTTC
ATGCTATATATGTCATAGACTGGTATGATGTCAGGCCCGTAAAAATCGTT
TTCGAGAGTCACAAAGCGATACTCCTTCACCTTCCAAATGCCCCTTCTCT
CTCCCCACTTCCCCCCACCATTTCGTGACACGGGACTGAGATTTATTATT
GGGTCACACGAGGTCACACCCCAGGCCCCTAGGAGTCAAAGATCTGAACA
GTTCTATGCTCGAGACTTTTTCCGAACAGCGAAGAGTCTTGGGAACAAAG
GAAAGTTGATCGCCCCAGTTGTTGGCGGTAGTTCTATGCCAATTATCTCC
ACGTGCCGTATGTACTGACTGCACTCGACTGTGTTTCTGGTTAGGTGGGG
TTTCCAATCCCCGTAATCAACGTCACCGGCGTAGTGCCGCTACTTTCGAT
GGGGGTTAGGTTAGAAAGAATCCGCACACGAAAAGGGGACCAACTTCCCA
GGTCCCATGTCGTGAAAACAACGTGAGCGATGCAACATGATAATTGCGTT
CAGTCTCACGCGTTCCTTGACCTGAGACATTTTTTGCAATACCCTTTGTT
TTTCAGATTTTATATCCGCCGATCCTGTGCACTTCTATTTTTAACAGGAG
ACTCCTTCACCGTTCACAATGATAAAGATTTCGAGCGGGACGTACTGACG
GCCAACTATCGCCACGGCAAGTTCTCCAGCTTCCAGCGCCAGCTCAACAT
GTACGGCTTTCGAAAAGTGGCGGACTGTTCCGACCGCACCTATTCACACC
CTTTCTTCCGCCGCGACTGTCCAAATCTCCTCGTCAAAGTGCGCCGCGTG
AACCCCAAAACAGGCAAGAGCACTGCCACCCACAAACCAGCTGCGATGAC
AGCAGTGGAAGGCACGACCGAAGACTCGTTACAGTCCTCCACCATCGCGG
TCGCGGCGGCGGAGGCGGCAGTGGGGAAAATCGGCACCGATCGCGACCAA
TCAGACGTCAGAGAACACGATCATGATGACTTTGGTGCTGAAACAACAGG
CGAGTCTGAGCAAGGGGAAGAGGAGACGACCCCCGCCGCTCGCAAGAAGC
GACGTGTGAGCGTGACGGGTCCAAGTGCCCCGCTTGGAAGCACGGCTGGC
TCCGCGGCCAAGGCGAGAGCTGCAGGAAATGTCGGCAGCTCATCATCAGC
AGCTCATCGACCATTGCAGTATTGGATTGGGGGGAACGCGGGTGTTCCAG
GGGTGCCAAAGGCGAAGCCGGTGGCGGCGGCGGAGGCAGCGGCGGCGGCT
CGCAAGCAATCTAAATCAGCGGTTTTGACCACGCCTGCCGACAAGCAGGC
GAAAGCACAGGCGCGGGCACAGGCGCGGGCGCAGGCTAAGCTGGGGGGAA
ATGGCAAATCGAAGGGAAGCAACGGCGCTCTTAGCAGGCGCGAGGTTGGT
GGTGGTGGTGGTGGTGGTGGCATGGTGCTGCTGCCCCAGCAGACGGAGGG
TTCTAAGCAGTACTGGAAGCTCAACCAACACAAGTTCAGCGTAGGGGGTA
GTGGGGTAGCTTCCTCGTGGACCACCAACCCCAACTCATGCTCTTCTCCC
TCGACGTCATCTGCTGCTTCCTCCATCGACTCCTCTCCCACTCTTCTTCC
TTCAAGGGTGGGTGGCGGCGGCAGCGGTGGTGGCTGCATGCCGAAGATGG
CGCGTGGTGGCGCCCAAGGAAAGCCCAAGGCACGCCCGCAAAATATTTCA
AGTTCCACTGTGCCGCCGAGTCCTGTAGGATCGTCAGCAATAGCGTCCTC
CGGCGGGAGCGGTGGGATTGATGGGTACTGGCGCCGGGCCTATGAACCCG
ATGATAACCGCGGTAACGTCCTCAGCGCGGCATCTCAATCCTCCCACACC
GCCGACTGCACGCAAGCGATGAACTCGCCGGGTTTCTACTATGGAGCGTG
GAGTGGCGGCGGCGGTGGCGGAGGAGCCAACGTTACCAGTAGTGGAGCGC
CCGGCGACTGCAGAGCGGAGAGCGCCCAAGACCAGTCCCAATTTTGGCTC
GATAAGGCCTTTGGGTTCGGC back to topCoding sequence (CDS) from alignment at H-paniculata_contig5204:2949..12819+ >mRNA_H-paniculata_contig5204.12562.1 ID=mRNA_H-paniculata_contig5204.12562.1|Name=mRNA_H-paniculata_contig5204.12562.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3204bp|location=Sequence derived from alignment at H-paniculata_contig5204:2949..12819+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGACACGCTCTGCGCGAGCGAATGGCGCGGGTGGGGGAGCGACAGCAGC
AGCTGGCAGCAGCAGCGGCGGGGCTACAACTGGTAAACGAGGGAAACGAG
GCGCCCCTCAGACGTTTGCGTGGAAGCTGTTCAGCATCCTCAAAGCAGGC
ACGCCCATCGTGGGTTGGAGTGAAGCAGATGACACGCTCTGCGCGAGCGA
ATGGCGCGGGTGGGGGAGCGACAGCAGCAGCTGGCAGCAGCAGCGGCGGG
GCTACAACTGGTAAACGAGGGAAACGAGGCGCCCCTCAGACGTTTGCGTG
GAAGCTGTTCAGCATCCTCAAAGCAGGCACGCCCATCGTGGGTTGGAGTG
AAGCAGGAGACTCCTTCACCGTTCACAATGATAAAGATTTCGAGCGGGAC
GTACTGACGGCCAACTATCGCCACGGCAAGTTCTCCAGCTTCCAGCGCCA
GCTCAACATGTACGGCTTTCGAAAAGTGGCGGACTGTTCCGACCGCACCT
ATTCACACCCTTTCTTCCGCCGCGACTGTCCAAATCTCCTCGTCAAAGTG
CGCCGCGTGAACCCCAAAACAGGCAAGAGCACTGCCACCCACAAACCAGC
TGCGATGACAGCAGTGGAAGGCACGACCGAAGACTCGTTACAGTCCTCCA
CCATCGCGGTCGCGGCGGCGGAGGCGGCAGTGGGGAAAATCGGCACCGAT
CGCGACCAATCAGACGTCAGAGAACACGATCATGATGACTTTGGTGCTGA
AACAACAGGCGAGTCTGAGCAAGGGGAAGAGGAGACGACCCCCGCCGCTC
GCAAGAAGCGACGTGTGAGCGTGACGGGTCCAAGTGCCCCGCTTGGAAGC
ACGGCTGGCTCCGCGGCCAAGGCGAGAGCTGCAGGAAATGTCGGCAGCTC
ATCATCAGCAGCTCATCGACCATTGCAGTATTGGATTGGGGGGAACGCGG
GTGTTCCAGGGGTGCCAAAGGCGAAGCCGGTGGCGGCGGCGGAGGCAGCG
GCGGCGGCTCGCAAGCAATCTAAATCAGCGGTTTTGACCACGCCTGCCGA
CAAGCAGGCGAAAGCACAGGCGCGGGCACAGGCGCGGGCGCAGGCTAAGC
TGGGGGGAAATGGCAAATCGAAGGGAAGCAACGGCGCTCTTAGCAGGCGC
GAGGTTGGTGGTGGTGGTGGTGGTGGTGGCATGGTGCTGCTGCCCCAGCA
GACGGAGGGTTCTAAGCAGTACTGGAAGCTCAACCAACACAAGTTCAGCG
TAGGGGGTAGTGGGGTAGCTTCCTCGTGGACCACCAACCCCAACTCATGC
TCTTCTCCCTCGACGTCATCTGCTGCTTCCTCCATCGACTCCTCTCCCAC
TCTTCTTCCTTCAAGGGTGGGTGGCGGCGGCAGCGGTGGTGGCTGCATGC
CGAAGATGGCGCGTGGTGGCGCCCAAGGAAAGCCCAAGGCACGCCCGCAA
AATATTTCAAGTTCCACTGTGCCGCCGAGTCCTGTAGGATCGTCAGCAAT
AGCGTCCTCCGGCGGGAGCGGTGGGATTGATGGGTACTGGCGCCGGGCCT
ATGAACCCGATGATAACCGCGGTAACGTCCTCAGCGCGGCATCTCAATCC
TCCCACACCGCCGACTGCACGCAAGCGATGAACTCGCCGGGTTTCTACTA
TGGAGCGTGGAGTGGCGGCGGCGGTGGCGGAGGAGCCAACGTTACCAGTA
GTGGAGCGCCCGGCGACTGCAGAGCGGAGAGCGCCCAAGACCAGTCCCAA
TTTTGGCTCGATAAGGCCTTTGGGTTCGGCGAGACTCCTTCACCGTTCAC
AATGATAAAGATTTCGAGCGGGACGTACTGACGGCCAACTATCGCCACGG
CAAGTTCTCCAGCTTCCAGCGCCAGCTCAACATGTACGGCTTTCGAAAAG
TGGCGGACTGTTCCGACCGCACCTATTCACACCCTTTCTTCCGCCGCGAC
TGTCCAAATCTCCTCGTCAAAGTGCGCCGCGTGAACCCCAAAACAGGCAA
GAGCACTGCCACCCACAAACCAGCTGCGATGACAGCAGTGGAAGGCACGA
CCGAAGACTCGTTACAGTCCTCCACCATCGCGGTCGCGGCGGCGGAGGCG
GCAGTGGGGAAAATCGGCACCGATCGCGACCAATCAGACGTCAGAGAACA
CGATCATGATGACTTTGGTGCTGAAACAACAGGCGAGTCTGAGCAAGGGG
AAGAGGAGACGACCCCCGCCGCTCGCAAGAAGCGACGTGTGAGCGTGACG
GGTCCAAGTGCCCCGCTTGGAAGCACGGCTGGCTCCGCGGCCAAGGCGAG
AGCTGCAGGAAATGTCGGCAGCTCATCATCAGCAGCTCATCGACCATTGC
AGTATTGGATTGGGGGGAACGCGGGTGTTCCAGGGGTGCCAAAGGCGAAG
CCGGTGGCGGCGGCGGAGGCAGCGGCGGCGGCTCGCAAGCAATCTAAATC
AGCGGTTTTGACCACGCCTGCCGACAAGCAGGCGAAAGCACAGGCGCGGG
CACAGGCGCGGGCGCAGGCTAAGCTGGGGGGAAATGGCAAATCGAAGGGA
AGCAACGGCGCTCTTAGCAGGCGCGAGGTTGGTGGTGGTGGTGGTGGTGG
TGGCATGGTGCTGCTGCCCCAGCAGACGGAGGGTTCTAAGCAGTACTGGA
AGCTCAACCAACACAAGTTCAGCGTAGGGGGTAGTGGGGTAGCTTCCTCG
TGGACCACCAACCCCAACTCATGCTCTTCTCCCTCGACGTCATCTGCTGC
TTCCTCCATCGACTCCTCTCCCACTCTTCTTCCTTCAAGGGTGGGTGGCG
GCGGCAGCGGTGGTGGCTGCATGCCGAAGATGGCGCGTGGTGGCGCCCAA
GGAAAGCCCAAGGCACGCCCGCAAAATATTTCAAGTTCCACTGTGCCGCC
GAGTCCTGTAGGATCGTCAGCAATAGCGTCCTCCGGCGGGAGCGGTGGGA
TTGATGGGTACTGGCGCCGGGCCTATGAACCCGATGATAACCGCGGTAAC
GTCCTCAGCGCGGCATCTCAATCCTCCCACACCGCCGACTGCACGCAAGC
GATGAACTCGCCGGGTTTCTACTATGGAGCGTGGAGTGGCGGCGGCGGTG
GCGGAGGAGCCAACGTTACCAGTAGTGGAGCGCCCGGCGACTGCAGAGCG
GAGAGCGCCCAAGACCAGTCCCAATTTTGGCTCGATAAGGCCTTTGGGTT
CGGC back to top
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