mRNA_H-paniculata_contig52010.12558.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig52010.12558.1 vs. uniprot
Match: D7FYF7_ECTSI (DRP, dynamin-related protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYF7_ECTSI) HSP 1 Score: 240 bits (612), Expect = 1.510e-72 Identity = 125/200 (62.50%), Postives = 151/200 (75.50%), Query Frame = 1
Query: 1 IDDVFEGRVVPMLEGLEKLRVIQEGNNEVAVPGVVVIGAQSAGKSSVLEAIAGIKLPRGQNATTRVPLILSLVGVPSSSPEAVIGRNTDASDNKVVDIDHVDEEIKALTTELAGDGAAVSKTPIYCRVKRDSGPTLTLIDLPGITHICADDSQDIHGQTVSLVT*HIENENMLILVVIPAMEDSANSEAISLARKYDPSG 600
ID+ E R+ L LE+LR + + N EV +PGVVV GAQSAGKSSVLEA+ G+KLPRGQN TTRVPL+LSLV VP + P AVIG D S K++ ID + +I+ LT ELAGDG AVS PIY ++ R SGPTLTLIDLP ITH D +QDIH +TV+LV IEN+NM+ILVVIPAM+D AN+EAI+LA+KYDP G
Sbjct: 7 IDNEIENRLSGELGALEQLRALLQNNEEVKIPGVVVAGAQSAGKSSVLEALGGMKLPRGQNITTRVPLVLSLVAVPGAEPHAVIGGQADLSKGKIIGIDEISTDIERLTNELAGDGTAVSAKPIYLKIIRPSGPTLTLIDLPDITHNSPDGTQDIHTETVNLVKKFIENDNMVILVVIPAMDDFANAEAIALAKKYDPDG 206
BLAST of mRNA_H-paniculata_contig52010.12558.1 vs. uniprot
Match: A0A8J2ELG6_9DINO (Hypothetical protein (Fragment) n=1 Tax=Amoebophrya sp. A25 TaxID=1410381 RepID=A0A8J2ELG6_9DINO) HSP 1 Score: 144 bits (364), Expect = 2.690e-40 Identity = 83/172 (48.26%), Postives = 111/172 (64.53%), Query Frame = 1
Query: 85 VAVPGVVVIGAQSAGKSSVLEAIAGIKLPRGQNATTRVPLILSLVGVPSSSPEAVIGRNTDASDNKVVDIDHVDEEIKALTTELAGDGAAVSKTPIYCRVKRDSGPTLTLIDLPGITHICADDSQDIHGQTVSLVT*HIENENMLILVVIPAMEDSANSEAISLARKYDPSG 600
+ VPGVVVIG QSAGKSSVLEAI+GI PRG+N TR P IL + ++P G +D + + + + EI+ LT + AG G+++ PI+ +V +DSGPTLTLIDLPGITH+ S DIH V L+ +I NE M+IL V+PA+ D N EA+ LA++ D G
Sbjct: 1 IEVPGVVVIGDQSAGKSSVLEAISGINFPRGENTCTRRPAILRMETRCGNAP----GEASDLHNAVRIPLTEIGGEIQRLTRDKAGPGSSIIADPIHIKVVQDSGPTLTLIDLPGITHVHESQS-DIHDVIVGLLRTYIANEQMVILAVVPAVSDFGNCEALKLAKEVDAEG 167
BLAST of mRNA_H-paniculata_contig52010.12558.1 vs. uniprot
Match: A0A813LGD8_POLGL (Hypothetical protein n=2 Tax=Polarella glacialis TaxID=89957 RepID=A0A813LGD8_POLGL) HSP 1 Score: 152 bits (385), Expect = 2.890e-39 Identity = 88/186 (47.31%), Postives = 123/186 (66.13%), Query Frame = 1
Query: 46 LEKLRVIQEGNNEVAVPGVVVIGAQSAGKSSVLEAIAGIKLPRGQNATTRVPLILSLVGVPSS-SPEAVIGRNTDASDNKVVDIDHVDEEIKALTTELAGDGAAVSKTPIYCRVKRDSGPTLTLIDLPGITHICADDSQDIHGQTVSLVT*HIENENMLILVVIPAMEDSANSEAISLARKYDPSG 600
LE++R + + ++A+PGVVV+G QSAGKSS+LE I+GI+ PR QN TR+P IL+++ PS P A + ++ + + V+E+I+ALT + A +S+ +Y RV R GP L+LIDLPG+TH AD DIH TVSLV ++ +E ++IL VIPAM D N+E I LARKYDP G
Sbjct: 128 LERVRHVCQAV-QIALPGVVVVGEQSAGKSSLLENISGIQFPRAQNTCTRMPCILTMLTDPSILEPYAKVSMDSSFEGAEQCAVGEVEEKIRALTAQHATGDTFISRKALYVRVVRKDGPQLSLIDLPGVTHN-ADKMADIHEVTVSLVEEYVRHEEVVILCVIPAMSDFGNAEVIKLARKYDPEG 311
BLAST of mRNA_H-paniculata_contig52010.12558.1 vs. uniprot
Match: A0A812V0V8_9DINO (DRP4C protein n=1 Tax=Symbiodinium necroappetens TaxID=1628268 RepID=A0A812V0V8_9DINO) HSP 1 Score: 145 bits (365), Expect = 3.910e-38 Identity = 81/174 (46.55%), Postives = 115/174 (66.09%), Query Frame = 1
Query: 82 EVAVPGVVVIGAQSAGKSSVLEAIAGIKLPRGQNATTRVPLILSLVGVPSSSPE-AVIGRNTDASDNKVVDIDHVDEEIKALTTELAGDGAAVSKTPIYCRVKRDSGPTLTLIDLPGITHICADDSQDIHGQTVSLVT*HIENENMLILVVIPAMEDSANSEAISLARKYDPSG 600
++ +PGVVV+G QSAGKSS+LE I+GI+ PR QN TR+P +L+++ P+ + A++ ++ +D K + V+ IK LT + A +S+ +Y RV R GP L+LIDLPG+TH A+ +IH TVSLV +IE E M+IL VIPAM D N+E + LAR+YDP G
Sbjct: 42 QIPLPGVVVVGEQSAGKSSLLENISGIQFPRAQNTCTRMPCVLTMLTDPTVNESFALVSMDSSFTDAKRCAVADVEGRIKQLTDQHTTGAAFISREALYIRVVRRDGPQLSLIDLPGVTHN-AEKMSNIHEVTVSLVKEYIEPEEMVILCVIPAMSDFGNAEVVKLAREYDPEG 214
BLAST of mRNA_H-paniculata_contig52010.12558.1 vs. uniprot
Match: R0I9E5_9BRAS (Dynamin-type G domain-containing protein n=1 Tax=Capsella rubella TaxID=81985 RepID=R0I9E5_9BRAS) HSP 1 Score: 143 bits (361), Expect = 7.850e-37 Identity = 81/205 (39.51%), Postives = 122/205 (59.51%), Query Frame = 1
Query: 1 IDDVFEGRVVPMLEGLEKLRVIQEGNNEVAVPGVVVIGAQSAGKSSVLEAIAGIKLPRGQNATTRVPLILSLVGVPSSSPEAVIGRNTDASDNKVVDIDHVDEEIKALTTELAGDGAAVSKTPIYCRVKRDSGPTLTLIDLPGITHICADDS-QDIHGQTVSLVT*HIENENMLILVVIPAMEDSANSEAISLARKYDPSGAVRL 612
I + ++ P+L ++KLR + + + +P +VV+G QS+GKSSVLE++AGI LPRGQN TRVPL++ L S PE ++ N + + D DH+ E I T +AG G VS TP+ VK+ P +T+IDLPGIT + + ++I+ Q ++V IE +IL V+PA D N E+I ++RK D +G + L
Sbjct: 22 IVSAYSDQIRPLLNTIDKLRSLNVMSEGIHLPTIVVVGDQSSGKSSVLESLAGISLPRGQNICTRVPLVMRLENSTSHVPEILLKFNNETI--TITDEDHISEAISKATDAIAGTGKGVSDTPLTLHVKKAGVPDITMIDLPGITRVPVNGQPENIYDQIAAMVMKQIEPLETIILNVLPATSDFTNCESICMSRKVDKNGELTL 224
BLAST of mRNA_H-paniculata_contig52010.12558.1 vs. uniprot
Match: A0A812KZ97_9DINO (DRP4C protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812KZ97_9DINO) HSP 1 Score: 144 bits (362), Expect = 4.110e-36 Identity = 82/174 (47.13%), Postives = 114/174 (65.52%), Query Frame = 1
Query: 82 EVAVPGVVVIGAQSAGKSSVLEAIAGIKLPRGQNATTRVPLILSLVGVPSSSPE-AVIGRNTDASDNKVVDIDHVDEEIKALTTELAGDGAAVSKTPIYCRVKRDSGPTLTLIDLPGITHICADDSQDIHGQTVSLVT*HIENENMLILVVIPAMEDSANSEAISLARKYDPSG 600
++ +PGVVV+G QSAGKSS+LE I+GI+ PR QN TR+P IL+++ P+ S A++ ++ D + + V+ +IK LT A A +S+ +Y RV R GP L+LIDLPG+TH A+ +IH TV LV +IE E M+IL VIPAM D N+E + LAR+YDP G
Sbjct: 362 QIPLPGVVVVGEQSAGKSSLLENISGIQFPRAQNTCTRMPCILTMLTDPTVSESYALVSMDSSFGDAQQCAVPDVEGQIKRLTEMHATGEAFISRQALYVRVVRRDGPQLSLIDLPGVTHN-AEKMSNIHEVTVDLVKEYIEPEEMVILCVIPAMSDFGNAEVVKLAREYDPDG 534
BLAST of mRNA_H-paniculata_contig52010.12558.1 vs. uniprot
Match: A0A812NNR0_9DINO (DRP4C protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812NNR0_9DINO) HSP 1 Score: 142 bits (359), Expect = 9.390e-36 Identity = 79/174 (45.40%), Postives = 116/174 (66.67%), Query Frame = 1
Query: 82 EVAVPGVVVIGAQSAGKSSVLEAIAGIKLPRGQNATTRVPLILSLVGVPSSS-PEAVIGRNTDASDNKVVDIDHVDEEIKALTTELAGDGAAVSKTPIYCRVKRDSGPTLTLIDLPGITHICADDSQDIHGQTVSLVT*HIENENMLILVVIPAMEDSANSEAISLARKYDPSG 600
E+ +PGVVV+G QSAGKSS+LE+I+GI+ PR QN TR+P +L+++ P++ P A++ + D + V+ +IK LT + A +SK ++ RV R GP L+LIDLPG+TH A+ ++IH TV+LV +I+ + M+IL VIPAM D N+E + LA+KYDP G
Sbjct: 34 EIPLPGVVVVGEQSAGKSSLLESISGIQFPRSQNTCTRMPCVLTMLTDPATDDPYALVSMDPSFEDAGPCPVMQVEGKIKQLTEKHATGDDFISKQALFVRVVRKEGPQLSLIDLPGVTHN-AECMENIHEVTVALVEEYIKPDEMVILCVIPAMSDFGNAEVVKLAKKYDPDG 206
BLAST of mRNA_H-paniculata_contig52010.12558.1 vs. uniprot
Match: A0A815NTJ4_9BILA (Hypothetical protein n=1 Tax=Rotaria sordida TaxID=392033 RepID=A0A815NTJ4_9BILA) HSP 1 Score: 137 bits (346), Expect = 6.260e-35 Identity = 86/195 (44.10%), Postives = 116/195 (59.49%), Query Frame = 1
Query: 34 MLEGLEKLRVIQEGNNEVAVPGVVVIGAQSAGKSSVLEAIAGIKLPRGQNATTRVPLILSLVGVPSSSPEAVIGRNTDASDNKVVDIDHVDEEIKALTTELAGDGAAVSKTPIYCRV-KRDSGPTLTLIDLPGITHICADDSQD-IHGQTVSLVT*HIENENMLILVVIPAMEDSANSEAISLARKYDPSGAVRL 612
+L ++K+R + G +VA+P +VV+G QS GKSSVLEAI+GI+LPR QN TR PL L + + G + ++ D+ + EE+ LT+E+AG GA VS PIY V K D LTLIDLPGIT D IH QT+ L+ +IE ++L VIPA D A SE++ LA+ YDPS +L
Sbjct: 14 LLLAIDKMRELLHGE-KVALPEIVVVGDQSVGKSSVLEAISGIQLPRAQNICTRCPLELRMKTAKDEEYAIIRGSVGSTKEKRIDDLTKIAEEVTRLTSEIAGKGANVSPNPIYLTVYKHDILYDLTLIDLPGITRAPVKGQADNIHEQTLELIKTYIEPNTAIVLHVIPASVDFATSESMKLAKGYDPSSQRQL 207
BLAST of mRNA_H-paniculata_contig52010.12558.1 vs. uniprot
Match: UPI001CC38FC6 (putative dynamin-related protein 4A n=1 Tax=Manihot esculenta TaxID=3983 RepID=UPI001CC38FC6) HSP 1 Score: 133 bits (334), Expect = 7.100e-35 Identity = 77/199 (38.69%), Postives = 117/199 (58.79%), Query Frame = 1
Query: 13 FEGRVVPMLEGLEKLRVIQEGNNEVAVPGVVVIGAQSAGKSSVLEAIAGIKLPRGQNATTRVPLILSLVGVPSSSPEAVIGRNTDASDNKVVDID--HVDEEIKALTTELAGDGAAVSKTPIYCRVKRDSGPTLTLIDLPGITHICADDS-QDIHGQTVSLVT*HIENENMLILVVIPAMEDSANSEAISLARKYDPSG 600
+ + P+L+ ++KLR + + +P +VV+G QS+GKSSVLE++AGI LPRGQ TRVPL++ L PS +PE + + K+V D HV + I T E+AGDG +S TP+ VK+ P LT++DLPGIT + +DI+ Q ++ +I E +IL V+ A D E+I ++R+ D +G
Sbjct: 39 YNDHIRPLLDAVDKLRHLNVTKEGIQLPTIVVVGDQSSGKSSVLESLAGINLPRGQGICTRVPLVMRLQHHPSPTPELFLEFS-----GKIVATDEAHVADAINIATDEIAGDGKGISNTPLTLVVKKKGVPDLTMVDLPGITRVPVHGQPEDIYEQIAGIIMEYIRPEESIILNVLSATVDFPTCESIRMSRQVDKTG 232
BLAST of mRNA_H-paniculata_contig52010.12558.1 vs. uniprot
Match: A0A0A0LKS0_CUCSA (Interferon-induced GTP-binding protein mx n=11 Tax=Cucurbitaceae TaxID=3650 RepID=A0A0A0LKS0_CUCSA) HSP 1 Score: 139 bits (351), Expect = 7.940e-35 Identity = 78/199 (39.20%), Postives = 120/199 (60.30%), Query Frame = 1
Query: 13 FEGRVVPMLEGLEKLRVIQEGNNEVAVPGVVVIGAQSAGKSSVLEAIAGIKLPRGQNATTRVPLILSLVGVPSSSPEAVIGRNTDASDNKVVDIDH--VDEEIKALTTELAGDGAAVSKTPIYCRVKRDSGPTLTLIDLPGITHI-CADDSQDIHGQTVSLVT*HIENENMLILVVIPAMEDSANSEAISLARKYDPSG 600
+ R+ P+L+ ++KLR + + +P +VV+G QS+GKSSVLE++AGI +PRGQ TRVPLI+ L P S PE V+ N K++ + + E+I T E+AG G +SKTP+ VK++ P LT++DLPGIT + D +DI+ Q ++ HI+ E +IL V+ A D E+I +++ D +G
Sbjct: 44 YNDRIRPLLDAVDKLRHLMIMREGIQLPTIVVVGDQSSGKSSVLESLAGISIPRGQGICTRVPLIMRLQNNPDSEPELVLEYN-----GKMIHTEESFIAEDISTATEEIAGSGKGISKTPLTLIVKKNGVPDLTMVDLPGITRVPVKDQPEDIYDQIKDIIMEHIKPEESIILNVLSATVDFPTCESIRMSQSVDKTG 237 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig52010.12558.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig52010.12558.1 >prot_H-paniculata_contig52010.12558.1 ID=prot_H-paniculata_contig52010.12558.1|Name=mRNA_H-paniculata_contig52010.12558.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=154bp MLEGLEKLRVIQEGNNEVAVPGVVVIGAQSAGKSSVLEAIAGIKLPRGQNback to top mRNA from alignment at H-paniculata_contig52010:175..786- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig52010.12558.1 ID=mRNA_H-paniculata_contig52010.12558.1|Name=mRNA_H-paniculata_contig52010.12558.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=612bp|location=Sequence derived from alignment at H-paniculata_contig52010:175..786- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig52010:175..786- >mRNA_H-paniculata_contig52010.12558.1 ID=mRNA_H-paniculata_contig52010.12558.1|Name=mRNA_H-paniculata_contig52010.12558.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=924bp|location=Sequence derived from alignment at H-paniculata_contig52010:175..786- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |