prot_H-paniculata_contig520.12551.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig520.12551.1
Unique Nameprot_H-paniculata_contig520.12551.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length340
Homology
BLAST of mRNA_H-paniculata_contig520.12551.1 vs. uniprot
Match: D7FRL4_ECTSI (U6 snRNA phosphodiesterase 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRL4_ECTSI)

HSP 1 Score: 256 bits (654), Expect = 1.300e-80
Identity = 153/275 (55.64%), Postives = 181/275 (65.82%), Query Frame = 0
Query:    1 MEHLLENYGEISDEEVEPSAAVEVPEHQQPSAGASSNELLQQLPPDVLTMFNDS-----------EYDLSVERRRADERAKDTQWTRRFPHERGNWPTFVFVAVPNSAEFVSMAEASVLDFRQKLAAAWADRYGSVAGR--GKKRGRESRSSSKDVQKSQSGTRKSHDKDPPEIVLNDMNPSMHQHLSLSKTVVLRAHQIDPFVQALKEAFSSSRRFTVSVVSGYDVLVNEDKSRSFVCLRVRGGRHLVLQLIRKSDTIMDRFKQPCYYEDPVVH 262
            M+HLLE Y   S E+       E  E + P+       +L  LP ++LT+F DS           EYDL+ ERRRA+ERA + +W RRFPHERGNWPT VF+ VPNSA F SMAEASV  FRQ+LA AW + +G   G   GKKR R+ R  S     S +G       DPPE+V+NDM+PS  QHLSLSKT  LRAHQI+PFV+ LKEA  SSR FT S VSGYDVLVNEDK+RSFVCLRVRGGR +VL LI K D +M RFKQ  YYE  ++H
Sbjct:    1 MDHLLEAYASSSSED-------EKIEEKDPNPS-----VLGGLPSELLTIFKDSASRHDSLRAATEYDLATERRRAEERAGNIRWVRRFPHERGNWPTHVFIPVPNSAAFKSMAEASVSHFRQRLATAWREGHGRAEGGKGGKKRTRDGRQRSNQASASSAGKL-----DPPEVVMNDMDPSGRQHLSLSKTTALRAHQINPFVRGLKEAVKSSRSFTASFVSGYDVLVNEDKTRSFVCLRVRGGRQMVLSLIAKVDPLMRRFKQSEYYEVIIMH 258          
BLAST of mRNA_H-paniculata_contig520.12551.1 vs. uniprot
Match: A0A6H5K6W9_9PHAE (U6 snRNA phosphodiesterase 1 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6W9_9PHAE)

HSP 1 Score: 242 bits (617), Expect = 1.490e-74
Identity = 169/375 (45.07%), Postives = 201/375 (53.60%), Query Frame = 0
Query:    1 MEHLLENYGEIS--DEEVE---PSAAVEVPEHQQPSAGASSNELLQQLPPDVLTMFNDSEYDLSVERRRADERAKDTQWTRRFPHERGNWPTFVFVAVPNSAEFVSMAEASVLDFRQKLAAAWADRYGSVAGR--GKKRGRESRSSSKDVQKSQSGTRKSHDKDPPEIVLNDMNPSMHQHLSLSKTVVLRAHQIDPFVQALKEAFSSSRRFTVSVVSGYDVLVNEDKSRSFVCLRVRGGRHLVLQLIRKSDTIMDRFKQPCYYEDPVVHVSIASVAGDVSSYVGSS--------------------------------FDHAKAGTEREDKCDDPDRDGSNSESEEDVAAPSEVCVDVSTVVCKAGTTLFQAPLS 336
            M+HLLE Y   S  DE++E   P  AV                 L  LP ++LT+F DSEYDL+ ERRRA+ERA +  W RRFPHERGNWPT VF+ VPNS+ F SMAEASV  FRQ+LAAAW DR+G   G   G+KR  + R  S     S +G       DPPE+V+N+M+PS  QHLSLSKT  LRAHQIDPFVQ LK+A  SSRR                         VRGGR +VL LI K D +M RFKQ  YYE+P+VHVS+ASV GDVS+YV SS                                                         S +DV  PSEVC+ V  V+CKAGTT F+APL+
Sbjct:    1 MDHLLEAYASSSSDDEKIEENDPKPAV-----------------LGALPSELLTLFKDSEYDLATERRRAEERAGNIPWVRRFPHERGNWPTHVFIPVPNSSAFKSMAEASVSHFRQRLAAAWRDRHGRAEGGKGGRKRTSDGRRRSNQASASSAGKL-----DPPEVVMNNMDPSGRQHLSLSKTTALRAHQIDPFVQGLKDAVKSSRR-------------------------VRGGRKMVLGLIAKVDPLMRRFKQSGYYEEPIVHVSVASVLGDVSTYVSSSSRVPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXISSDDV--PSEVCLTVDVVMCKAGTTYFEAPLA 326          
BLAST of mRNA_H-paniculata_contig520.12551.1 vs. uniprot
Match: A0A4D9D6D2_9STRA (U6 snRNA phosphodiesterase 1 n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D6D2_9STRA)

HSP 1 Score: 109 bits (272), Expect = 2.910e-23
Identity = 81/257 (31.52%), Postives = 119/257 (46.30%), Query Frame = 0
Query:   69 AKDTQWTRRFPHERGNWPTFVFVAVPNSAEFVSMAEASVLDFRQKLAAAWADRYGSVAGRGKKRGRESRSSSKDVQKSQSGTRKSHDKDPPEIVLNDMNP-----------------------SMH---------QHLSLSKTVVLRAHQIDPFVQALKEAFSSSRRFTVSVV------SGYDVLVNEDKSRSFVCLRVR-GGRHLVLQLIRKSDTIMDRFKQPCYYEDPVVHVSIASVAGDVSSYVGSSFDHAKAG 286
            A    W R  PH  GNW T V++ VPN+ E V MA+A V + R++L        G   G  +K+                           E+V ND+NP                       S H         QHLSLS+TV LR++ ++PFV  L +A + +R FT  +        G  +LVN+D+SRSFV + V  GG   + Q++   D ++ +++QP YY   + H+S+A+V GDVS   G+    A+AG
Sbjct:  132 ASTVDWIRSVPHFEGNWATHVYITVPNTREVVRMAKACVQEARRRLRNVLGTETGGEEGWQEKK---------------------------ELVENDLNPVPSADSSDEDXXXXGAGEEEGRESRHLPSDQETSGQHLSLSRTVYLRSYHMEPFVADLGKALAWARAFTFRLAWRRGRGGGEGLLVNDDRSRSFVTVPVEEGGEGRLRQVVESVDEVLVKYRQPPYYRGALFHISVAAVKGDVSEAWGAG---ARAG 358          
BLAST of mRNA_H-paniculata_contig520.12551.1 vs. uniprot
Match: A0A7S2UZE3_9STRA (U6 snRNA phosphodiesterase 1 n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UZE3_9STRA)

HSP 1 Score: 96.3 bits (238), Expect = 7.200e-20
Identity = 59/167 (35.33%), Postives = 86/167 (51.50%), Query Frame = 0
Query:  173 HLSLSKTVVLRAHQIDPFVQALKEAFSSSRRFTVSVVSGYDVLVNEDKSRSFVCLRVRGGRHLVLQLIRKSDTIMDRFKQPCYYEDPVVHVSIASVAGD-VSSYVGSSFDHAKAGTEREDKCDDPDRDGSNSESEEDVAAPSEVCVDVSTVVCKAGTTLFQAPLSSD 338
            H+SLS+  VLR H IDP V AL++A SS+  FTV V   ++VL N+  +RSFVCL++  G  L+  L+ + D ++ +F+ P YY++   H+S+AS  GD +   V  S D              P R                + V V +++CK G   F   LSSD
Sbjct:   71 HISLSRPFVLRYHHIDPLVAALQQALSSAPSFTVEVQGEWEVLTNDQGTRSFVCLKIGPGSSLLEDLVDRVDGVLQKFRAPVYYQEKKFHISVASALGDGLKMAVKKSTDDV------------PGR-------------MKSLYVHVDSILCKIGNKEFNISLSSD 212          
BLAST of mRNA_H-paniculata_contig520.12551.1 vs. uniprot
Match: A0A6P8QU68_GEOSA (U6 snRNA phosphodiesterase n=2 Tax=Geotrypetes seraphini TaxID=260995 RepID=A0A6P8QU68_GEOSA)

HSP 1 Score: 97.1 bits (240), Expect = 1.430e-19
Identity = 72/231 (31.17%), Postives = 105/231 (45.45%), Query Frame = 0
Query:   43 LPPDVLTMFNDSEYDLSVERRRADERAKDTQWTRRFPHERGNWPTFVFVAVPNSAEFVSMAEASVLDFRQKLAAAWADRYGSVAGRGKKRGRESRSSSKDVQKSQSGTRKSHDKDPPEIVLNDMNPSMHQHLSLSKTVVLRAHQIDPFVQALKEAFSSSRRFTVSVVSGYDVLVNEDKSRSFVCLRVRGGRHLVLQLIRKSDTIMDRFKQPCYYEDPVVHVSIASVAGDVS 273
            +P  VL MF DS+     E    D+ A+     R FPHERGNW T+V++    S EF  + +  +   R          YG                                     + L  M      H+SLS+TVVLR H I+PFVQ+L++   S  RF   VV    V  N++K+R+F+ L V  G   +LQLI + D +++ F    +Y++P  H+S+A   GD+S
Sbjct:   60 VPDSVLNMFQDSK-----EEHHCDDSARHGGRMRNFPHERGNWATYVYMPYETSEEFFDLLDLLLTHTRT---------YG-------------------------------------LSLVRMEEF---HISLSQTVVLRHHWINPFVQSLRDRLLSVHRF-FCVVDEVKVYTNQEKTRTFLGLAVSSGHMQILQLISEVDRVLEEFNLQTFYKNPSFHISLAWCIGDLS 235          
BLAST of mRNA_H-paniculata_contig520.12551.1 vs. uniprot
Match: A0A8C8RU18_9SAUR (U6 snRNA phosphodiesterase n=1 Tax=Pelusios castaneus TaxID=367368 RepID=A0A8C8RU18_9SAUR)

HSP 1 Score: 95.9 bits (237), Expect = 1.640e-19
Identity = 75/249 (30.12%), Postives = 113/249 (45.38%), Query Frame = 0
Query:   34 ASSNELLQQLP-PD-VLTMFNDSEYDLSVERRRADERAKDTQWTRRFPHERGNWPTFVFVAVPNSAEFVSMAEASVLDFRQKLAAAWADRYGSVAGRGKKRGRESRSSSKDVQKSQSGTRKSHDKDPPEIVLNDMNPSMHQHLSLSKTVVLRAHQIDPFVQALKEAFSSSRRFTVSVVSGYDVLVNEDKSRSFVCLRVRGGRHLVLQLIRKSDTIMDRFKQPCYYEDPVVHVSIASVAGDVSSYVGSSF 280
            A S+ LL +LP PD VL MF D E +++      D+  K     R FPHERGNW T++++      E + + E  +   R+                                                + L  M      H+SLS++VVLR H I+P VQ+LKE  +S  RF  S  S   V  N+ K+R+FV L V  G   +L+L+ + D +M+ F  P +Y++P  H+S+A   GD++  +   F
Sbjct:    6 AQSSVLLPRLPVPDSVLNMFRDQEEEVT------DDSTKHGGRVRNFPHERGNWATYIYLPCEIQEELLELLELLISHARRHA----------------------------------------------VSLTAMEEF---HISLSQSVVLRYHWINPLVQSLKERVTSFYRF-YSTASQVKVYTNQHKTRTFVGLEVLCGHAQLLELVSEVDKVMEEFGLPTFYKNPSFHISLAWCVGDLTDKLEGHF 198          
BLAST of mRNA_H-paniculata_contig520.12551.1 vs. uniprot
Match: D0MXX8_PHYIT (U6 snRNA phosphodiesterase n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0MXX8_PHYIT)

HSP 1 Score: 95.1 bits (235), Expect = 3.010e-19
Identity = 71/234 (30.34%), Postives = 112/234 (47.86%), Query Frame = 0
Query:   58 LSVERRRADERAKDTQWTRRFPHERGNWPTFVFVAVPNSAEFVSMAEASVLDFRQKLAAAWADRYGSVAGRGKKRGRESRSSSKDVQKSQSGTRKSHDKDPPEIVLNDMNPSMHQHLSLSKTVVLRAHQIDPFVQALKEAFSSSRRFTVSVVSGYDVLVNEDKSRSFVCLRVRGGRHLVLQLIRKSDTIMDRFKQPCYYEDPVVHVSIASVAGDVSSYVGSSFDHAKAGTERED 291
            +  +R+R+DE+    QW R FPH  GNWP+ V + +P + E   +A  ++ +  Q++     D    +A                                 E+ L     + + HLSLS+  VL   QI+ FV +L+ A    +RF+V++     VL N++K+RSF+ LRV  G     Q++R  D  + R +QP YY+DP+ HVSIAS  G+  + + S   H   G +  D
Sbjct:   38 VGTKRKRSDEQ----QWKRAFPHVDGNWPSHVRIDIPVTHELRELARHAI-ERAQEIVG---DAVAMLAFE-------------------------------ELGLTSTGATDYLHLSLSRPFVLTYDQINGFVDSLRAALKWQQRFSVTLRRAL-VLANDEKTRSFLALRVGEGEQQFTQVLRCVDQCLSRVEQPTYYKDPIPHVSIASSLGEELAQLTSDQFHVAIGNKHYD 231          
BLAST of mRNA_H-paniculata_contig520.12551.1 vs. uniprot
Match: A0A836CMF3_9STRA (U6 snRNA phosphodiesterase 1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMF3_9STRA)

HSP 1 Score: 97.8 bits (242), Expect = 3.050e-19
Identity = 51/131 (38.93%), Postives = 77/131 (58.78%), Query Frame = 0
Query:  173 HLSLSKTVVLRAHQIDPFVQALKEAFSSSRRFTVSVVSGYDVLVNEDKSRSFVCLRVRGGRHLVLQLIRKSDTIMDRFKQPCYYEDPVVHVSIAS--------------VAGDVSSYVGSSFDHAKAGTER 289
            HLSLS+   LRAHQ++PF   L+ A + +R F   V   Y+VLVN+D++RSFVCL+V GG   +L LI + +  +  F+Q  YYEDP +H+S+AS               AGD++  + +     ++G+ R
Sbjct:  169 HLSLSRPFALRAHQLEPFAARLRRAAAGARAFRCEVSGAYEVLVNDDRTRSFVCLKVVGGCAPILALIGRVNEALADFQQQTYYEDPKLHISVASXXXXXXXXXXXXXXAAGDITQLLAAGEHTRRSGSHR 299          
BLAST of mRNA_H-paniculata_contig520.12551.1 vs. uniprot
Match: G4YH94_PHYSP (U6 snRNA phosphodiesterase n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4YH94_PHYSP)

HSP 1 Score: 95.1 bits (235), Expect = 3.540e-19
Identity = 73/214 (34.11%), Postives = 104/214 (48.60%), Query Frame = 0
Query:   58 LSVERRRADERAKDTQWTRRFPHERGNWPTFVFVAVPNSAEFVSMAEASVLDFRQKLAAAWADRYGSVAGRGKKRGRESRSSSKDVQKSQSGTRKSHDKDPPEIVLNDMNPSMHQHLSLSKTVVLRAHQIDPFVQALKEAFSSSRRFTVSVVSGYDVLVNEDKSRSFVCLRVRGGRHLVLQLIRKSDTIMDRFKQPCYYEDPVVHVSIASVAGD 271
            +  +R+R DE     QW R FPH  GNWP+ V + +P + E   MA+ ++ D  Q+L     +    V     + G  S + S                                HLSLS+  +L   QI+ FV +L  A    +RF+V++  G  VLVN+DK+RSF+ LRV  G     Q++R  D  +  FKQP YY+DP+ HVSIAS  G+
Sbjct:   43 IGTKRKRPDE----PQWKRAFPHVDGNWPSHVRIDIPVTEELREMAKCAI-DRAQELVG---ENVTLVPFEELRLGESSSTGS----------------------------GGGLHLSLSRAFILTYDQIEGFVDSLHTALKWRQRFSVTL-EGALVLVNDDKTRSFLALRVSAGAQQFNQVLRCVDQCLACFKQPTYYQDPIPHVSIASSMGE 219          
BLAST of mRNA_H-paniculata_contig520.12551.1 vs. uniprot
Match: A0A8C4K6K0_DRONO (U6 snRNA phosphodiesterase n=2 Tax=Dromaius novaehollandiae TaxID=8790 RepID=A0A8C4K6K0_DRONO)

HSP 1 Score: 96.3 bits (238), Expect = 4.170e-19
Identity = 70/241 (29.05%), Postives = 109/241 (45.23%), Query Frame = 0
Query:   35 SSNELLQQLP-PD-VLTMFNDSEYDLSVERRRADERAKDTQWTRRFPHERGNWPTFVFVAVPNSAEFVSMAEASVLDFRQKLAAAWADRYGSVAGRGKKRGRESRSSSKDVQKSQSGTRKSHDKDPPEIVLNDMNPSMHQHLSLSKTVVLRAHQIDPFVQALKEAFSSSRRFTVSVVSGYDVLVNEDKSRSFVCLRVRGGRHLVLQLIRKSDTIMDRFKQPCYYEDPVVHVSIASVAGDVS 273
            SS+E   +LP PD VL MF + E ++       D+ +K     R FPHERGNW T+V++      +F+ + +  V   R                                                    + +      H+SLS++VVLR H I+PFVQ+LKE  +S  RF   +     V  N++K+R+F+ L V  G   +L+L+ + D +M  F  P +Y+DP  H+S+A   GD++
Sbjct:   77 SSSEAAPRLPVPDSVLNMFKEQEEEV------VDDSSKHGGRVRNFPHERGNWATYVYIPYEVREDFLELLDLLVSHAR-------------------------------------------------TYASSLTAMEEFHISLSQSVVLRYHWINPFVQSLKERLASFDRF-FCLADQVKVYTNQNKTRTFIGLEVSAGHFQLLELVSEVDKVMQEFDLPMFYKDPSFHISLAWCVGDLT 261          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig520.12551.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FRL4_ECTSI1.300e-8055.64U6 snRNA phosphodiesterase 1 n=1 Tax=Ectocarpus si... [more]
A0A6H5K6W9_9PHAE1.490e-7445.07U6 snRNA phosphodiesterase 1 n=1 Tax=Ectocarpus sp... [more]
A0A4D9D6D2_9STRA2.910e-2331.52U6 snRNA phosphodiesterase 1 n=1 Tax=Nannochlorops... [more]
A0A7S2UZE3_9STRA7.200e-2035.33U6 snRNA phosphodiesterase 1 n=1 Tax=Fibrocapsa ja... [more]
A0A6P8QU68_GEOSA1.430e-1931.17U6 snRNA phosphodiesterase n=2 Tax=Geotrypetes ser... [more]
A0A8C8RU18_9SAUR1.640e-1930.12U6 snRNA phosphodiesterase n=1 Tax=Pelusios castan... [more]
D0MXX8_PHYIT3.010e-1930.34U6 snRNA phosphodiesterase n=2 Tax=Phytophthora in... [more]
A0A836CMF3_9STRA3.050e-1938.93U6 snRNA phosphodiesterase 1 n=1 Tax=Tribonema min... [more]
G4YH94_PHYSP3.540e-1934.11U6 snRNA phosphodiesterase n=1 Tax=Phytophthora so... [more]
A0A8C4K6K0_DRONO4.170e-1929.05U6 snRNA phosphodiesterase n=2 Tax=Dromaius novaeh... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.90.1140.10coord: 77..336
e-value: 3.4E-42
score: 146.0
IPR027521U6 snRNA phosphodiesterase Usb1PFAMPF09749HVSLcoord: 43..331
e-value: 1.3E-39
score: 136.1
IPR027521U6 snRNA phosphodiesterase Usb1PANTHERPTHR13522UNCHARACTERIZEDcoord: 1..337

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig520contigH-paniculata_contig520:6866..12950 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig520.12551.1mRNA_H-paniculata_contig520.12551.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig520 6552..13074 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig520.12551.1 ID=prot_H-paniculata_contig520.12551.1|Name=mRNA_H-paniculata_contig520.12551.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=340bp
MEHLLENYGEISDEEVEPSAAVEVPEHQQPSAGASSNELLQQLPPDVLTM
FNDSEYDLSVERRRADERAKDTQWTRRFPHERGNWPTFVFVAVPNSAEFV
SMAEASVLDFRQKLAAAWADRYGSVAGRGKKRGRESRSSSKDVQKSQSGT
RKSHDKDPPEIVLNDMNPSMHQHLSLSKTVVLRAHQIDPFVQALKEAFSS
SRRFTVSVVSGYDVLVNEDKSRSFVCLRVRGGRHLVLQLIRKSDTIMDRF
KQPCYYEDPVVHVSIASVAGDVSSYVGSSFDHAKAGTEREDKCDDPDRDG
SNSESEEDVAAPSEVCVDVSTVVCKAGTTLFQAPLSSDK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027521Usb1