mRNA_H-paniculata_contig5198.12543.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig5198.12543.1 vs. uniprot
Match: D8LQN6_ECTSI (2-oxoisovalerate dehydrogenase subunit alpha n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQN6_ECTSI) HSP 1 Score: 640 bits (1650), Expect = 1.130e-221 Identity = 321/434 (73.96%), Postives = 362/434 (83.41%), Query Frame = 2
Query: 110 QLPRIGPGTTSRTRLGKSTSISIKPEESDGAHAVGPTKCGVYAGGVEMPFTSKLNIMDPANIPVWPVYRVLDDDGSLRNDAVEPKLGLEVALRIYGNMVRLEALDDIFYNAQRQGRMSFYLQSAGEEALQMGAAAALHAEDMAFTQYREPGILMWRDFGLQGFADQCISNVSDLGKGRQMPVHYGSRELHFQASICISTVSSPLATQIPQAVGAGYALKLSGAQNIAVCYFGEGAASEGDFHAALSVAATRDVPVLFICRNNGYAISTSVIDQYRGDGIVARAPGYGMHGLRVDGNDALAMYQATSEARKLCLSENKPVLMEAMTYRLGHHSTSDDWSRYRSPIEVKQWKTSRNPILRFSAYLERKGWWTGDKDRELRDKERQAVLKALETAERKPKPSIDTMFEDVYKTVPPHLREQREQLNEHLRRHSGRYD 1411
+LP++ TTS S + D P K GVYAGG EMPFTS L I DP +PVWPV+RVLDDDGS+R DAVEPKLG E AL++YGNMVRLEA+DDIFYNAQRQGR+SFYLQSAGEEALQMG AAAL DMAFTQYREPG+LMWRDFG+Q FADQC+SN+SDLGKGRQMPVHYGS+ELH+Q TVSSPL TQIPQAVGAGYALKLSG NIAVCYFG+GAASEGDFHAAL++AATRDVPVLF+CRNNGYAISTSV DQYRGDGIV+RAPGYGMH +RVDGNDALAM+ AT+EAR++CLS+ KPVLMEAMTYRLGHHSTSDDWSRYRS EVKQWK + +PI RF +YLE KGWW KDR LRD+ER++VL ALETAERK KPS+ +MFEDVY+ VPPHL+EQ+ QL HL R++GRYD
Sbjct: 20 KLPKVTKSTTSHMSSAGSETTRAAAATRDA-----PAKVGVYAGGKEMPFTSILRIEDPDKLPVWPVFRVLDDDGSVRADAVEPKLGKETALKMYGNMVRLEAMDDIFYNAQRQGRISFYLQSAGEEALQMGGAAALDMNDMAFTQYREPGLLMWRDFGVQSFADQCLSNISDLGKGRQMPVHYGSKELHYQ------TVSSPLGTQIPQAVGAGYALKLSGKDNIAVCYFGDGAASEGDFHAALALAATRDVPVLFVCRNNGYAISTSVADQYRGDGIVSRAPGYGMHAVRVDGNDALAMFAATAEARRVCLSQKKPVLMEAMTYRLGHHSTSDDWSRYRSSNEVKQWKANHHPIRRFYSYLEGKGWWDSAKDRVLRDRERRSVLIALETAERKAKPSLGSMFEDVYEVVPPHLQEQKHQLYAHLERNAGRYD 442
BLAST of mRNA_H-paniculata_contig5198.12543.1 vs. uniprot
Match: A0A835YQC5_9STRA (2-oxoisovalerate dehydrogenase subunit alpha n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQC5_9STRA) HSP 1 Score: 476 bits (1226), Expect = 1.200e-157 Identity = 242/411 (58.88%), Postives = 301/411 (73.24%), Query Frame = 2
Query: 182 PEESDGAHAVGPTKCGVYAGGVEMPFTSKLNIMDPANIPVWPVYRVLDDDGSLRNDAVEPKLGLEVALRIYGNMVRLEALDDIFYNAQRQGRMSFYLQSAGEEALQMGAAAALHAEDMAFTQYREPGILMWRDFGLQGFADQCISNVSDLGKGRQMPVHYGSRELHFQASICISTVSSPLATQIPQAVGAGYALKLSGAQNIAVCYFGEGAASEGDFHAALSVAATRDVPVLFICRNNGYAISTSVIDQYRGDGIVARAPGYGMHGLRVDGNDALAMYQATSEARKLCLSENKPVLMEAMTYRLGHHSTSDDWSRYRSPIEVKQWKTSRNPILRFSAYLERKGWWTGDKDRELRDKERQAVLKALETAERKPKPSIDTMFEDVYKTVPPHLREQREQLNEHLRRHSGRYDE 1414
P S+ + P+ +AGGVE+P TS L+I+ + P WPVYRV+D DG+L A+EP+L E+A+ + MVRL +D IFYNAQRQGR+SFY+ S GEEA Q+ +AAAL D F QYREPG+LMWR F LQ FADQ SN DLG+GRQMPVHYGS +L+FQ T+SSPLATQIPQAVGA YALK + CYFG+GAASEGDFHAA++ AAT + PVLFICRNNGYAIST V DQYRGDGIV+RAPGYGM +RVDGNDALA++ AT EAR+L L+EN+PVL+E MTYR+GHHSTSDDWSRYR EVK W++ +P+ R AYL KG D ++ +RD ER AV+ ALE AE+K P + +MFEDVY+ +P HL EQR ++ H+ ++ +Y +
Sbjct: 47 PAPSESTSSQAPSSA-TFAGGVELPLTSSLHIVKAESQPRWPVYRVIDTDGALVPGAMEPELSTELAMHMVTCMVRLRVMDHIFYNAQRQGRISFYMTSTGEEATQICSAAALSGGDTVFGQYREPGVLMWRGFSLQNFADQLFSNTDDLGRGRQMPVHYGSSKLNFQ------TISSPLATQIPQAVGAAYALKQQKLAQVVACYFGDGAASEGDFHAAMNFAATLECPVLFICRNNGYAISTPVEDQYRGDGIVSRAPGYGMAAIRVDGNDALAVFAATQEARRLALAENRPVLLELMTYRVGHHSTSDDWSRYRMTEEVKDWQSHNDPLRRLLAYLHAKGLCDADMEQAMRDTERLAVMAALEAAEKKGPPPLQSMFEDVYRDMPQHLLEQRAEMLAHVAKYPDKYPQ 450
BLAST of mRNA_H-paniculata_contig5198.12543.1 vs. uniprot
Match: A0A7S1U9K2_9STRA (2-oxoisovalerate dehydrogenase subunit alpha n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U9K2_9STRA) HSP 1 Score: 471 bits (1211), Expect = 5.960e-156 Identity = 238/394 (60.41%), Postives = 293/394 (74.37%), Query Frame = 2
Query: 233 YAGGVEMPFTSKLNIMDPANIPVWPVYRVLDDDGSLRNDAVEPKLGLEVALRIYGNMVRLEALDDIFYNAQRQGRMSFYLQSAGEEALQMGAAAALHAEDMAFTQYREPGILMWRDFGLQGFADQCISNVSDLGKGRQMPVHYGSRELHFQASICISTVSSPLATQIPQAVGAGYALKLSGAQNIAVCYFGEGAASEGDFHAALSVAATRDVPVLFICRNNGYAISTSVIDQYRGDGIVARAPGYGMHGLRVDGNDALAMYQATSEARKLCLSENKPVLMEAMTYRLGHHSTSDDWSRYRSPIEVKQWKTSRNPILRFSAYLERKGWWTGDKDRELRDKERQAVLKALETAERKPKPSIDTMFEDVYKTVPPHLREQREQLNEHLRRHSGRYDE 1414
Y GGV++P+T L ++DP WPVYRVL +G + A EP L E A ++Y +VRL+A+D IFY+AQRQGR+SFY+ S GEEA +G+AAAL A D+ F QYRE G LM+R F LQ FAD C SN DLGKGRQMPVHYG L+F T+SSPLATQIPQAVGAGYALK G NI+V YFGEGAASEGDFHAAL+ +AT +VP++F CRNNGYAIST V DQYRGDGIVARAPGYG+ +RVDGNDALA+YQA +EAR L+ N+PVL+EAMTYR+GHHSTSDD +RYRS E++ W T P RF +LE KGWW ++ R +ER AVLKA+ETAE K P +D++FEDVY+ +PP+L Q+ +L EH++RH Y++
Sbjct: 27 YPGGVQLPYTKTLQLVDPQAAEKWPVYRVLGLEGQVLAGAAEPDLDEETARKMYRTLVRLQAMDVIFYSAQRQGRISFYMTSTGEEATHVGSAAALDAGDVMFAQYREAGTLMYRGFTLQQFADHCFSNEGDLGKGRQMPVHYGCEALNFH------TISSPLATQIPQAVGAGYALKQKGGDNISVVYFGEGAASEGDFHAALNFSATLEVPMIFFCRNNGYAISTPVKDQYRGDGIVARAPGYGVTAIRVDGNDALAVYQAVAEARAYALANNRPVLIEAMTYRIGHHSTSDDSTRYRSVNEIQDWATHDEPGFRFRTWLEGKGWWNEAEETAARQEERMAVLKAMETAENKGPPPLDSLFEDVYEEMPPNLARQKRELLEHVQRHPEFYEK 414
BLAST of mRNA_H-paniculata_contig5198.12543.1 vs. uniprot
Match: A0A7R9U7P8_9STRA (2-oxoisovalerate dehydrogenase subunit alpha n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U7P8_9STRA) HSP 1 Score: 454 bits (1169), Expect = 1.150e-148 Identity = 224/391 (57.29%), Postives = 288/391 (73.66%), Query Frame = 2
Query: 236 AGGVEMPFTSKLNIMDPANIPVWPVYRVLDDDGSLRNDAVEPKLGLEVALRIYGNMVRLEALDDIFYNAQRQGRMSFYLQSAGEEALQMGAAAALHAEDMAFTQYREPGILMWRDFGLQGFADQCISNVSDLGKGRQMPVHYGSRELHFQASICISTVSSPLATQIPQAVGAGYALKLSGAQNIAVCYFGEGAASEGDFHAALSVAATRDVPVLFICRNNGYAISTSVIDQYRGDGIVARAPGYGMHGLRVDGNDALAMYQATSEARKLCLSENKPVLMEAMTYRLGHHSTSDDWSRYRSPIEVKQWKTSRNPILRFSAYLERKGWWTGDKDRELRDKERQAVLKALETAERKPKPSIDTMFEDVYKTVPPHLREQREQLNEHLRRHSGRY 1408
AG +P T++L + DP VWP+ R ++ +G + A P+L E A R+Y +VR++ +DD+F++AQRQGR+SFY+ + GEEAL +G+A+AL +D+ F QYRE G+LMWR F LQ FADQC N D+GKGRQMPVHYGSR+ +FQ T+SSPLATQIPQAVGA YALKL GA N+A+CYFGEGAASEGDFHAAL+ +AT + PV+F CRNNGYAIST DQYRGDGIVARA GYG+ +RVDGNDALA++QAT+EAR LS N+PVL+E MTYR+GHHSTSDD +RYRS E++ WK P +RF +L KGWW+ +++ R + R VL+AL+ AERK KP + +FEDVY +P HL Q++ +EH+ RH Y
Sbjct: 99 AGEGGLPITTRLELHDPQTEAVWPMLRTINLEGRVLPGATVPELSRETAQRMYEVIVRVQTMDDVFFSAQRQGRISFYMTNTGEEALHVGSASALDPDDVVFAQYREAGVLMWRGFTLQNFADQCYGNADDVGKGRQMPVHYGSRKHNFQ------TISSPLATQIPQAVGAAYALKLQGAPNVAMCYFGEGAASEGDFHAALNFSATLEAPVIFFCRNNGYAISTPAKDQYRGDGIVARASGYGVAAIRVDGNDALAVHQATAEARTFALSNNRPVLIEGMTYRVGHHSTSDDSTRYRSLAEIQGWKDKDQPEVRFRNWLRSKGWWSTEQETSARQEARNEVLRALQAAERKAKPPLSAIFEDVYAELPDHLLRQKKDFDEHVARHQDFY 483
BLAST of mRNA_H-paniculata_contig5198.12543.1 vs. uniprot
Match: K3WEH6_GLOUD (2-oxoisovalerate dehydrogenase subunit alpha n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WEH6_GLOUD) HSP 1 Score: 441 bits (1135), Expect = 1.790e-144 Identity = 214/392 (54.59%), Postives = 288/392 (73.47%), Query Frame = 2
Query: 233 YAGGVEMPFTSKLNIMDPANIPVWPVYRVLDDDGSLRNDAVEPKLGLEVALRIYGNMVRLEALDDIFYNAQRQGRMSFYLQSAGEEALQMGAAAALHAEDMAFTQYREPGILMWRDFGLQGFADQCISNVSDLGKGRQMPVHYGSRELHFQASICISTVSSPLATQIPQAVGAGYALKLSGAQNIAVCYFGEGAASEGDFHAALSVAATRDVPVLFICRNNGYAISTSVIDQYRGDGIVARAPGYGMHGLRVDGNDALAMYQATSEARKLCLSENKPVLMEAMTYRLGHHSTSDDWSRYRSPIEVKQWKTSRNPILRFSAYLERKGWWTGDKDRELRDKERQAVLKALETAERKPKPSIDTMFEDVYKTVPPHLREQREQLNEHLRRHSGRY 1408
Y G ++P+ + L I DP + P YR+L++ G + A +P+LG ++ +++Y NM+RL A+D+IFY+AQRQGR+SFY+ S GEEA+Q G+A+A+ DM F QYREPG+LMWR + L+ FADQC SN GKGRQMPVHYGS+ ++Q T+SSPLATQ+PQAVGA Y+ K++ I+VCYFGEGAASEGDFHAAL+ AAT+D P+LF CRNNG+AIST +DQ+RGDGI +R GYG+ +RVDGND LA+++AT +AR L EN+PVL+EAM+YR GHHSTSDD +RYR E+K WK + +PI R +YL R+GW + ++D+ LRD ER VL AL+ AE K PS++T+FEDVY PHL Q +++ EH+ ++ Y
Sbjct: 34 YFPGTKLPYVADLAIKDPRENELIPCYRILNEQGDIVEGATDPELGQDICIQMYTNMIRLNAMDNIFYDAQRQGRISFYMTSYGEEAIQFGSASAIRQSDMVFGQYREPGVLMWRGYTLENFADQCFSNKDGHGKGRQMPVHYGSKNFNYQ------TISSPLATQLPQAVGAAYSFKIAKEDRISVCYFGEGAASEGDFHAALNFAATKDCPILFFCRNNGFAISTPTVDQFRGDGIASRGAGYGIPIMRVDGNDFLAVHEATRKARAFILKENRPVLIEAMSYRQGHHSTSDDSTRYREVAEIKHWKETCDPIDRTRSYLFRRGWLSAEQDQHLRDNERTNVLAALQKAESKGPPSLNTLFEDVYDVKIPHLLRQEKEMLEHVAKYPDHY 419
BLAST of mRNA_H-paniculata_contig5198.12543.1 vs. uniprot
Match: K8Z799_NANGC (2-oxoisovalerate dehydrogenase subunit alpha n=3 Tax=Monodopsidaceae TaxID=425072 RepID=K8Z799_NANGC) HSP 1 Score: 438 bits (1126), Expect = 3.660e-142 Identity = 227/394 (57.61%), Postives = 275/394 (69.80%), Query Frame = 2
Query: 251 MPFTSKLNIMDPANIPVWPVYRVLDDDGSLRNDAVEPKLGLEVALRIYGNMVRLEALDDIFYNAQRQGRMSFYLQSAGEEALQMGAAAALHAEDMAFTQYREPGILMWRDFGLQGFADQCISNVSDLGKGRQMPVHYGSRELHFQASICISTVSSPLATQIPQAVGAGYALKLSGAQNIA------VCYFGEGAASEGDFHAALSVAATRDVPVLFICRNNGYAISTSVIDQYRGDGIVARAPGYGMHGLRVDGNDALAMYQATSEARKLCLSENKPVLMEAMTYRLGHHSTSDDWSRYRSPIEVKQWKTSRNPILRFSAYLERKGWWTGDKDRELRDKERQAVLKALETAERKPKPSIDTMFEDVYKTVPPHLREQREQLNEHLRRHSGRYDE 1414
+PFTS L+++ P VWPVYRVL+ DG +R+ A+ P L V R+Y MVRL+A+D IFYNAQRQGR+SFY+ GEEA +G+AAAL ED QYRE G+LMWR F L FADQC SN DLGKGRQMP+HYG+ LHFQ T+SSPLATQIP AVGA Y +KL A A +C+FGEGAASEGDFHAAL+ AAT PVLF CRNNGYAIST V +Q+RGDG+V+RAPGYGMH LRVDGND LA+Y A AR++C+ E KPVL+EAMTYR+GHHSTSDD +RYRS E+KQW + + +LRD+ER AVL+ALE AE KPKP ++ +FEDVY+ P HLREQ L +H+ ++ Y E
Sbjct: 96 IPFTSSLHVVAPEEHVVWPVYRVLETDGRVRSGALVPDLDQAVVRRMYHTMVRLQAMDTIFYNAQRQGRISFYITCTGEEATHVGSAAALRPEDPVLAQYREGGVLMWRGFTLDQFADQCFSNRDDLGKGRQMPIHYGTAALHFQ------TISSPLATQIPHAVGAAYGIKLEDASKSAEDKRCVICFFGEGAASEGDFHAALNFAATLQAPVLFFCRNNGYAISTPVKEQFRGDGVVSRAPGYGMHALRVDGNDVLAVYHACQAAREVCVREGKPVLVEAMTYRVGHHSTSDDSTRYRSLSEIKQWHGQEDXXXXXXXXXXXXXXXXXXXEVQLRDEERMAVLRALERAEVKPKPGMEALFEDVYREKPWHLREQEAGLRDHVEKYPDVYKE 483
BLAST of mRNA_H-paniculata_contig5198.12543.1 vs. uniprot
Match: H3G9H1_PHYRM (2-oxoisovalerate dehydrogenase subunit alpha n=2 Tax=Phytophthora TaxID=4783 RepID=H3G9H1_PHYRM) HSP 1 Score: 436 bits (1120), Expect = 5.230e-142 Identity = 216/389 (55.53%), Postives = 279/389 (71.72%), Query Frame = 2
Query: 242 GVEMPFTSKLNIMDPANIPVWPVYRVLDDDGSLRNDAVEPKLGLEVALRIYGNMVRLEALDDIFYNAQRQGRMSFYLQSAGEEALQMGAAAALHAEDMAFTQYREPGILMWRDFGLQGFADQCISNVSDLGKGRQMPVHYGSRELHFQASICISTVSSPLATQIPQAVGAGYALKLSGAQNIAVCYFGEGAASEGDFHAALSVAATRDVPVLFICRNNGYAISTSVIDQYRGDGIVARAPGYGMHGLRVDGNDALAMYQATSEARKLCLSENKPVLMEAMTYRLGHHSTSDDWSRYRSPIEVKQWKTSRNPILRFSAYLERKGWWTGDKDRELRDKERQAVLKALETAERKPKPSIDTMFEDVYKTVPPHLREQREQLNEHLRRHSGRY 1408
G EMPF + DP + + P +RVLD++G + A +P+L ++ +IY M+RL +D+IFY+AQRQGR+SFY+ S GEEA+ G+AAAL DM F QYREPG+LMWR F LQ FADQC SN GKG QMPVHYGS+ L+ Q T+SSPLATQ+PQA GA YA KL+ I+VCYFGEGAASEGDFHAAL+ AAT+D P+LF CRNNG+AIST +Q+RGDGI +R GYG+ +RVDGND LA+++AT AR+ L EN+PVL+EAM+YR GHHSTSDD ++YR+ E+K WK + +PI R YL ++GW T ++DR ++D ER VL AL+ AE K PS++TMFEDVY PHL EQ ++ EH+ ++ Y
Sbjct: 52 GTEMPFVPDVVFQDPRDSNLIPCFRVLDEEGEIVKGATDPQLSQDLCTQIYSQMIRLNTMDNIFYDAQRQGRISFYMTSYGEEAISFGSAAALRLGDMVFAQYREPGVLMWRGFSLQNFADQCFSNKDGHGKGCQMPVHYGSKNLNHQ------TISSPLATQLPQAAGAAYAFKLAKEDRISVCYFGEGAASEGDFHAALNFAATKDCPILFFCRNNGFAISTPTAEQFRGDGIASRGSGYGIPIMRVDGNDFLAVHEATRRAREFILKENRPVLVEAMSYRQGHHSTSDDSTQYRAVAEIKHWKETCDPIERTKRYLLKRGWLTEEQDRHMQDNERTNVLAALQQAETKEGPSLETMFEDVYDVKTPHLLEQEREMMEHVAKYPDHY 434
BLAST of mRNA_H-paniculata_contig5198.12543.1 vs. uniprot
Match: A0A067BQC1_SAPPC (2-oxoisovalerate dehydrogenase subunit alpha n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067BQC1_SAPPC) HSP 1 Score: 434 bits (1117), Expect = 7.700e-142 Identity = 218/395 (55.19%), Postives = 285/395 (72.15%), Query Frame = 2
Query: 227 GVYAGGVEMPFTSKLNIMDPANIPVWPVYRVLDDDGSLRNDAVEPK-LGLEVALRIYGNMVRLEALDDIFYNAQRQGRMSFYLQSAGEEALQMGAAAALHAEDMAFTQYREPGILMWRDFGLQGFADQCISNVSDLGKGRQMPVHYGSRELHFQASICISTVSSPLATQIPQAVGAGYALKLSGAQNIAVCYFGEGAASEGDFHAALSVAATRDVPVLFICRNNGYAISTSVIDQYRGDGIVARAPGYGMHGLRVDGNDALAMYQATSEARKLCLSENKPVLMEAMTYRLGHHSTSDDWSRYRSPIEVKQWKTSRNPILRFSAYLERKGWWTGDKDRELRDKERQAVLKALETAERKPKPSIDTMFEDVYKTVPPHLREQREQLNEHLRRHSGRY 1408
G + GG +P+ +K++++DP + V P YRVLD G L A P+ + ++A+ IY +M+RL ++D++FY+AQRQGR+SFY+ + GEE G+AAA+ DM F QYRE G+LMWR F L FADQ SN DLGKGRQMPVHYGSREL++Q TVSSPLATQ+PQA GA Y KL+ IAVCYFGEGAASEGDFHAAL++AATRD PVL+ RNNGYAIST V DQ+RGDGI +R GYG+ +RVDGND A+Y+AT +AR++ LS+ +PVL+E M+YR GHHSTSDD +RYR+ E+K WK + P+ R YL +GWW+ ++D L+D ER +VL AL AE K P++DTMFEDVY P HL++Q ++ EH+ ++ Y
Sbjct: 27 GEFPGGQTVPYVNKIHVVDPKDADVIPAYRVLDQQGKLVPGASLPEGIDEDLAVEIYKHMIRLNSMDNVFYDAQRQGRISFYMTAFGEEGTLFGSAAAIKPRDMVFAQYREAGVLMWRGFTLDQFADQLFSNEGDLGKGRQMPVHYGSRELNYQ------TVSSPLATQLPQAAGAAYGFKLAKEDRIAVCYFGEGAASEGDFHAALNIAATRDCPVLYFARNNGYAISTPVKDQFRGDGIASRGAGYGIPVIRVDGNDVFAVYEATKKAREMILSDGRPVLLETMSYRQGHHSTSDDSTRYRAVSEIKHWKDTNCPMNRLKLYLLDQGWWSEERDVALKDAERSSVLAALTKAEAKGIPALDTMFEDVYAEKPRHLQDQEAEMLEHIAKYPEHY 415
BLAST of mRNA_H-paniculata_contig5198.12543.1 vs. uniprot
Match: A0A7S3GUR4_9STRA (2-oxoisovalerate dehydrogenase subunit alpha (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GUR4_9STRA) HSP 1 Score: 436 bits (1120), Expect = 8.390e-142 Identity = 210/384 (54.69%), Postives = 290/384 (75.52%), Query Frame = 2
Query: 260 TSKLNIMDPANIPVWPVYRVLDDDGSLRNDAVEP-KLGLEVALRIYGNMVRLEALDDIFYNAQRQGRMSFYLQSAGEEALQMGAAAALHAEDMAFTQYREPGILMWRDFGLQGFADQCISNVSDLGKGRQMPVHYGSRELHFQASICISTVSSPLATQIPQAVGAGYALKLSGAQNIAVCYFGEGAASEGDFHAALSVAATRDVPVLFICRNNGYAISTSVIDQYRGDGIVARAPGYGMHGLRVDGNDALAMYQATSEARKLCLSENKPVLMEAMTYRLGHHSTSDDWSRYRSPIEVKQWKTSRNPILRFSAYLERKGWWTGDKDRELRDKERQAVLKALETAERKPKPSIDTMFEDVYKTVPPHLREQREQLNEHLRRHSGRY 1408
TS+L+++D WPV+R+L+ G L EP ++ E+A+++Y +MV+++ LD+I AQRQGR+SFY+Q+ GEEA+ +G+A+ L +EDM F+QYRE G+L+WR F +Q DQC SN +DLGKGRQMPVHYGS+ L+FQ T+SSPL TQ+PQAVGA YA KL ++++AVCYFGEGAASEGDFHAAL+ +AT +VP++F CRNNGYAIST +QYRGDGI +RA GYG+H +RVDGND LA+ AT+EAR++ + +KPVL+EAMTYR+GHHSTSDD +RYRS ++K W+ P+ RF Y+E +GWW DK++ +RDKER+ VL+A+ETAE++ KP+ D +FEDVY P H+ +Q + + H+ ++ Y
Sbjct: 66 TSELHVVDTTQGARWPVFRILNATGQLVEGVKEPAEVNEELAVKMYESMVQIQVLDEIMNLAQRQGRISFYMQAHGEEAIHIGSASVLSSEDMVFSQYREQGVLLWRGFTIQEALDQCFSNEADLGKGRQMPVHYGSKALNFQ------TISSPLGTQLPQAVGAAYAYKLDNSESVAVCYFGEGAASEGDFHAALNFSATLEVPIVFFCRNNGYAISTPSSEQYRGDGIASRAVGYGIHAIRVDGNDILAVRAATAEARRIAQALSKPVLVEAMTYRVGHHSTSDDSTRYRSAADIKHWQEQYEPLRRFRTYMEDRGWWNEDKEQAVRDKERKIVLQAMETAEKRDKPAFDKLFEDVYNDKPKHILKQEQDMFAHIAKYPEHY 443
BLAST of mRNA_H-paniculata_contig5198.12543.1 vs. uniprot
Match: A0A3M6VLB4_9STRA (2-oxoisovalerate dehydrogenase subunit alpha n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VLB4_9STRA) HSP 1 Score: 430 bits (1106), Expect = 3.180e-140 Identity = 213/390 (54.62%), Postives = 279/390 (71.54%), Query Frame = 2
Query: 248 EMPFTSKLNIMDPANIPVWPVYRVLDDDGSLRNDAVEPKLGLEVALRIYGNMVRLEALDDIFYNAQRQGRMSFYLQSAGEEALQMGAAAALHAEDMAFTQYREPGILMWRDFGLQGFADQCISNVSDLGKGRQMPVHYGSRELHFQASICISTVSSPLATQIPQAVGAGYALKLSGAQNIAVCYFGEGAASEGDFHAALSVAATRDVPVLFICRNNGYAISTSVIDQYRGDGIVARAPGYGMHGLRVDGNDALAMYQATSEARKLCLSENKPVLMEAMTYRLGHHSTSDDWSRYRSPIEVKQWKTSRNPILRFSAYLERKGWWTGDKDRELRDKERQAVLKALETAERKPKPSIDTMFEDVYKTVPPHLREQREQLNEHLRRHSGRYDEK 1417
EMPF + + DP + P +R+L++DG + + A +P L ++ +IY M+RL +D+IFY+AQRQGR+SFY+ S GEEA+ G+A+ALH DM F QYREPG+LMWR F LQ FADQC SN GKGRQMPVHYGS+ L+ Q T+SSPLATQIPQA GA YA KL+ IAVCYFGEGAASEGDFHAAL++A+T+D P+LF RNNG+AISTS +Q+RGDGI +R GYG+ +RVDGND LA+++ T AR+ L EN+PVL+EAM+YR GHHSTSDD ++YR E+K WK + +PI R Y+ +GW T D+DR ++D ER VL AL+ AE K P ++TMF+DVY PHL EQ ++ EH+ ++ Y ++
Sbjct: 33 EMPFVADVVFRDPKENDILPCFRILNEDGDVVDGAKDPLLSRDLCTQIYSQMIRLNTMDNIFYDAQRQGRISFYMTSHGEEAISFGSASALHLRDMVFAQYREPGVLMWRGFTLQEFADQCFSNKDGHGKGRQMPVHYGSKNLNHQ------TISSPLATQIPQAAGAAYAFKLAKEDRIAVCYFGEGAASEGDFHAALNIASTKDCPILFFVRNNGFAISTSTAEQFRGDGIASRGSGYGIPVMRVDGNDVLAVHEVTRRAREFILKENRPVLIEAMSYRQGHHSTSDDSTQYRPVAEIKHWKETCDPIDRTKRYMMNRGWLTEDQDRLMQDNERTNVLTALQQAETKGPPPLETMFDDVYDVKTPHLLEQEREMLEHVAKYPDYYAQE 416 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5198.12543.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig5198.12543.1 >prot_H-paniculata_contig5198.12543.1 ID=prot_H-paniculata_contig5198.12543.1|Name=mRNA_H-paniculata_contig5198.12543.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=457bp MTTSQSIRWVQGRVTNQLRSQLPRIGPGTTSRTRLGKSTSISIKPEESDGback to top mRNA from alignment at H-paniculata_contig5198:605..14234+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig5198.12543.1 ID=mRNA_H-paniculata_contig5198.12543.1|Name=mRNA_H-paniculata_contig5198.12543.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=13630bp|location=Sequence derived from alignment at H-paniculata_contig5198:605..14234+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig5198:605..14234+ >mRNA_H-paniculata_contig5198.12543.1 ID=mRNA_H-paniculata_contig5198.12543.1|Name=mRNA_H-paniculata_contig5198.12543.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2742bp|location=Sequence derived from alignment at H-paniculata_contig5198:605..14234+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |