mRNA_H-paniculata_contig11978.1253.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig11978.1253.1
Unique NamemRNA_H-paniculata_contig11978.1253.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig11978.1253.1 vs. uniprot
Match: D7G6W2_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6W2_ECTSI)

HSP 1 Score: 489 bits (1258), Expect = 1.700e-156
Identity = 260/425 (61.18%), Postives = 314/425 (73.88%), Query Frame = 1
Query:    1 MLEGVENIQSIL---ESIRPPSLRKLADVPAGAVTLGKSYAKRISLLDSAISHVTNPALVDAPCVLVGMGGGGKTVLASAVVRDTGVREHFCAGIFWLKAGQNAKENLHALLRGLVLELAARDGEVSPQLESLEDVKRLLTEFGGKARSLRLVVLDDVWEREVMDALQHTGLQLLVTTRDRTVVSVPGGSVEVGDMDENEALEVLRVGCGAIGTVELPRVEALQGPPQHPNSWRILHDALA----ARLGTHRPMTVGVRVKAVLEASFGAMADDPDRQKRCVFLAVLAPGTLAPPDMLQDLWNEASGAARAFAKQLVDQSMLQAVGGAYRVHDLVLRFLKPKLKANPDRLVATSRVVEYCGQLGVLHGYTEDGAKAGGLYSLIALWRSAESISEKHHVAAAYKRSLDRVPEGEPWLQASRVLELM 1254
            +++G+E+ Q +L     +RPP+L  +A VPAG ++L   +  R SLL  AI ++TN A+ DAPCVL GM G GK+VLASAVVRD  VREHF AG+FW++A ++AK+ LHA L G  L +A+  G  SP L S+E+V R L      + S RLVVLDDVWERE++DAL+ TGLQLLVTTRDR+VVS+PG  VEVGDM+E+EALEVLRVGCGA   +ELPR EALQGPPQ P SWR LH+AL+     RLGT R M V  RV AVLE S GAMADDP +Q+RC+FLAVLAPGTLAP DML+DLW+EA GA + FA QLVDQSMLQ  G A+RVHDLVL FLKPKLKA+P+R +ATSR  EY GQL VL  Y  DG  + G+Y+L+ALWRS E +  +  VAA Y  +L  VPE  PW QA RVLELM
Sbjct:  189 LVDGLEHHQLLLAVYRQLRPPTLPAMASVPAGPISLTDGHISRPSLLGRAIGYLTNTAVGDAPCVLTGMAGAGKSVLASAVVRDEKVREHFHAGMFWVRA-RDAKDQLHACLEGFALRVASTSGTTSPGLGSVEEVTRYLKAVCADSVSPRLVVLDDVWEREIVDALKLTGLQLLVTTRDRSVVSMPGECVEVGDMEEDEALEVLRVGCGASKNLELPRAEALQGPPQDPKSWRTLHEALSKAMSTRLGTDRIMAVPKRVDAVLEVSLGAMADDPAKQQRCLFLAVLAPGTLAPSDMLEDLWDEAPGATKTFAAQLVDQSMLQPAGDAFRVHDLVLLFLKPKLKADPNRPIATSRFAEYLGQLKVLRRYLGDGETSDGVYALMALWRSVEDLVGESRVAAVYMNNLQGVPEHAPWRQAGRVLELM 612          
BLAST of mRNA_H-paniculata_contig11978.1253.1 vs. uniprot
Match: A0A6H5KMV3_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMV3_9PHAE)

HSP 1 Score: 339 bits (869), Expect = 9.230e-109
Identity = 196/372 (52.69%), Postives = 245/372 (65.86%), Query Frame = 1
Query:    1 MLEGVENIQSIL---ESIRPPSLRKLADVPAGAVTLGKSYAKRISLLDSAISHVTNPALVDAPCVLVGMGGGGKTVLASAVVRDTGVREHFCAGIFWLKAGQNAKENLHALLRGLVLELAARDGEVSPQLESLEDVKRLLTEFGGKARSLRLVVLDDVWEREVMDALQHTGLQLLVTTRDRTVVSVPGGSVEVGDMDENEALEVLRVGCGAIGTVELPRVEALQGPPQHPNSWRILHDALAARLGTHRPMTVGVRVKAVLEASFGAMADDPDRQKRCVFLAVLAPGTLAPPDMLQDLWNEASGAARAFAKQLVDQSMLQAVGGAYRVHDLVLRFLKPKLKANPDRLVATSRVVEYCGQLGVLHGYTEDGAKA 1107
            +++G+E+ Q +L     +RPP+L  +A VPAG ++L   +  R SLL  AI ++TN A+ DAPCVL GM G GK+VLASAVV+   VREHF AG++W++A ++AK+ LHA L GL L +A+  G  +P L S+E+V R L      + S RL+VLDDVWEREV+D L+ TGLQLLVTTRDR+VVS+PG  VEVGDM E+EALE+LRVGCGA   +ELPR E LQ               +    G  R MTV  RV AVLE S GAMA+DP +Q+RC+FLA                   A GAA+ FA+QLVDQSMLQ  G A RVHDLVL FLKPKLKA+  R + TSR+ EY G L VL  Y EDG +A
Sbjct:  170 LVDGLEHQQLLLAVYRQLRPPTLPAMASVPAGPISLTDGHISRPSLLGRAIGYLTNTAVGDAPCVLTGMAGAGKSVLASAVVQVEKVREHFHAGMYWVRA-RDAKDQLHACLEGLALRVASTSGTTAPGLGSVEEVTRYLKAVCADSVSPRLIVLDDVWEREVVDTLKLTGLQLLVTTRDRSVVSMPGECVEVGDM-EDEALELLRVGCGASKNLELPRAEVLQ---------------VVVDCGNDRIMTVPKRVDAVLEVSLGAMAEDPAKQRRCLFLA-------------------APGAAKTFARQLVDQSMLQPAGDALRVHDLVLLFLKPKLKADSSRPITTSRIAEYLGHLKVLRRYVEDGRRA 505          
BLAST of mRNA_H-paniculata_contig11978.1253.1 vs. uniprot
Match: A0A6H5LJA6_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LJA6_9PHAE)

HSP 1 Score: 248 bits (632), Expect = 7.120e-73
Identity = 173/420 (41.19%), Postives = 241/420 (57.38%), Query Frame = 1
Query:   67 LADVPAGAVTLGKSYAKRISLLDSAISHVTNPALVDAPCVLVGMGGGGKTVLASAVVRDTGVREHFCAGIFWLKAGQNAKENLHALLRGLVLELAARDGE----VSPQLESLEDVKRLLTEFGGKARSLRLVVLDDVWEREVMDALQHTGLQLLVTTRDRTVVSVPGGSVEVGDMDENEALEVLRVGCGAIGTV----------------ELPRVEALQGPPQHPN-------SWRIL---HDALAARLGTHRPMTVGVRVKAVLEASFGAMADDPDRQKRCVFLAVLAPGTLAPPDMLQDLWN-EASGAARAFAKQLVDQSMLQAVGGA-YRVHDLVLRFLKPKLKANPDRLV-ATSRVVEYCGQLGVLHGY--TEDGAKAGGLYSLIALWRSAESISEKHHV-AAAYKRSLDRVPEGE 1218
            +A VPAGA+TL +SY +R ++ + A   +  P    AP  +VGMGGGGKT+L SAVVR + VREHF  G+FW++ G++AK +L +LL+GL  E++A   +    V   LESLE VK+ L        S RLVVLDDVWEREV+DAL   GL++LVTTRDR+VV V GG +E+GDM E EALE+L      +G                   LP V A+ G             +W  L    + +A ++      +  ++V  VL  SF A+A    +Q+  + + VLA G LAP +ML++LW  E +   R  A+ LV + +LQAVGG+ YRVHDLVL F+K  ++A  + +  AT+   +Y G++ VL  Y   E GA   GL+ L ALWRS E +S    +  A+Y+ SL  +   E
Sbjct:    1 MAAVPAGALTLPQSYVERAAVQEVA-DGLIKPEEPRAPYAVVGMGGGGKTMLVSAVVRKSNVREHFRGGVFWMRVGRHAKNSLLSLLQGLAREMSAAPTDTPHGVPHVLESLEQVKQHLATVASAGTSPRLVVLDDVWEREVVDALLSLGLKVLVTTRDRSVVGVSGGLLELGDMTEEEALELLLKTSRTVGQPGHEVRTQMTKVVVLCGHLPLVLAIAGSMSVVKGKGLTAVAWEELIKEFENVAKKMRVRGEQSSSIKV--VLGTSFDALA--ARKQEESLKMTVLAAGALAPIEMLRNLWEIEDAEGTREEAEGLVSKCLLQAVGGSGYRVHDLVLEFVKTSIRAEEEMVEKATALQAQYLGRVDVLKSYGDPEHGAGNQGLFFLDALWRSVEKLSGDPELEVASYRASLGELESCE 415          
BLAST of mRNA_H-paniculata_contig11978.1253.1 vs. uniprot
Match: D7G720_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G720_ECTSI)

HSP 1 Score: 254 bits (649), Expect = 2.830e-71
Identity = 183/446 (41.03%), Postives = 253/446 (56.73%), Query Frame = 1
Query:    1 MLEGVENIQSILE---SIRPPSLRKLADVPAGAVTL-GKSYAKRISLLDSAISHVTNPALVDAPCVLVGMGGGGKTVLASAVVRDTGVREHFCAGIFWLKAGQNAKENLHALLRGLVLELAARDGE----VSPQLESLEDVKRLLTEFGGKARSLRLVVLDDVWEREVMDALQHTGLQLLVTTRDRTVVSVPGGSVEVGDMDENEALEVLRVGCGAIGTV----------------ELPRVEALQGPPQHPN-------SWRILHDAL---AARLGTHRPMTVGVRVKAVLEASFGAMADDPDRQKRCVFLAVLAPGTLAPPDMLQDLWN-EASGAARAFAKQLVDQSMLQAVGGA-YRVHDLVLRFLKPKLKANPDRLV-ATSRVVEYCGQLGVLHGY--TEDGAKAGGLYSLIALWRSAESISEKHHV-AAAYKRSLDRVPEGE 1218
            +++G+E+ QS L    S+ PPSL  +A VPAGA+ L   SY +R ++ + A   +T P    AP  +VGMGGGGK+VLASAVVR   VREHF  GIFW++ G+ AK +L ALL+GL  ++ A   +    V   L+SLE V++ L        S RLVVLDDVWEREV+DA    G ++L+TTRDR+VV VP G +E+GD+ E EALE+LR   GA+G                   LP V A+ G             +W  L   L   A ++      +  ++V  VLE SF ++A    +Q+  + +AVLA G LAP +ML++LW  E +   R  A+ LV + +L AVGG  YRVHDLVL F K  ++A  + +  AT+   +Y G+L VL  Y   E G    GL+ L ALWRS E +S    +  A+Y+ SL+ +   E
Sbjct:  217 LVDGLEHHQSFLAALPSLLPPSLPDMAAVPAGALELPSSSYVERAAVQEVA-DGLTAPEESRAPYTVVGMGGGGKSVLASAVVRKPSVREHFRGGIFWVRVGRGAKSSLLALLQGLARDVGAAPTDAPCGVPRVLDSLEQVRQHLAAVTSTGTSQRLVVLDDVWEREVVDAFVPLGFKVLLTTRDRSVVGVPAGRLELGDVTEEEALELLRKTSGAVGQPGDDVRTKMTKVVALCGHLPLVLAIAGSMSVVRGKGLTAVAWEELAKELENVAKKMRARGEQSSSMKV--VLETSFDSLA--VRKQEEFLKMAVLAAGALAPIEMLRNLWEIEDAEGTRDDAEGLVSKCLLHAVGGGGYRVHDLVLEFAKTSIRAEEETVKKATALQAQYLGRLDVLESYGDPEHGTGDQGLFFLDALWRSVEKLSGDPGLEVASYRASLEELESCE 657          
BLAST of mRNA_H-paniculata_contig11978.1253.1 vs. uniprot
Match: D7G722_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G722_ECTSI)

HSP 1 Score: 252 bits (644), Expect = 1.050e-70
Identity = 181/446 (40.58%), Postives = 249/446 (55.83%), Query Frame = 1
Query:    1 MLEGVENIQSILE---SIRPPSLRKLADVPAGAVTL-GKSYAKRISLLDSAISHVTNPALVDAPCVLVGMGGGGKTVLASAVVRDTGVREHFCAGIFWLKAGQNAKENLHALLRGLVLELAARDGE----VSPQLESLEDVKRLLTEFGGKARSLRLVVLDDVWEREVMDALQHTGLQLLVTTRDRTVVSVPGGSVEVGDMDENEALEVLRVGCGAIGTV----------------ELPRVEALQGPPQHPN-------SWRILHDAL---AARLGTHRPMTVGVRVKAVLEASFGAMADDPDRQKRCVFLAVLAPGTLAPPDMLQDLWN-EASGAARAFAKQLVDQSMLQAVGGA-YRVHDLVLRFLKPKLKANPDRLV-ATSRVVEYCGQLGVLHGY--TEDGAKAGGLYSLIALWRSAESISEKHHV-AAAYKRSLDRVPEGE 1218
            +++G+E+ QS L    S+ PPSL  +A VP GA+ L   SY +R ++ + A   +T P    AP  +VGMGGGGK+VLASA VR   VREHF  GIFW++ G+ AK +L ALL+GL  ++ A   +    V   L+ LE V++ L        S RLVVLDDVWEREV+DA    G ++L+TTRDR+VV +P G +E+GDM E EALE+LR   G +G                   LP V A+ G             +W  L   L   A ++      +  ++V  VLE SF ++A    +Q+  + +AVLA G LAP +ML++LW  E +   R  A+ LV + +L AVGG  YRVHDLVL F K  ++A  + +  AT+   +Y G+L VL GY   E GA   GL+ L ALWRS E +S    +  A+Y  SL  +   E
Sbjct:  234 LVDGLEHHQSFLAALPSLLPPSLPDMAAVPTGALELPSSSYVERAAVQEVA-DGLTTPEESRAPYTVVGMGGGGKSVLASAAVRKPSVREHFRGGIFWVRVGRGAKSSLLALLQGLAWDVGAAPTDAPHGVPHVLDRLEQVQQHLAAVASTGTSPRLVVLDDVWEREVVDAFVPLGFKVLLTTRDRSVVGLPAGRLELGDMTEEEALELLRKTSGTVGQPGDDVRTKMTKVVALCGHLPLVLAIAGSMSVVRGKGLTAVAWEELAKELENVAKKMRARGEQSSSMKV--VLETSFDSLA--VRKQEEFLKMAVLAAGALAPIEMLRNLWEVEDAEGTRDDAEGLVSKCLLHAVGGGGYRVHDLVLEFAKTSIRAEEETVKKATALQAQYLGRLDVLEGYGDPEHGAGGQGLFFLDALWRSVEKLSGDPELEVASYHNSLGELESCE 674          
BLAST of mRNA_H-paniculata_contig11978.1253.1 vs. uniprot
Match: A0A6H5KF10_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF10_9PHAE)

HSP 1 Score: 241 bits (614), Expect = 1.490e-69
Identity = 128/224 (57.14%), Postives = 164/224 (73.21%), Query Frame = 1
Query:    1 MLEGVENIQSILES---IRPPSLRKLADVPAGAVTLGKSYAKRISLLDSAISHVTNPALVDAPCVLVGMGGGGKTVLASAVVRDTGVREHFCAGIFWLKAGQNAKENLHALLRGLVLELAARDGEVSPQLESLEDVKRLLTEFGGKARSLRLVVLDDVWEREVMDALQHTGLQLLVTTRDRTVVSVPGGSVEVGDMDENEALEVLRVGCGAIGTVELPRVEALQ 663
            +++G+E+ Q +L     +RPP+L  +A VP GA++L  ++  R  +L+ AI ++TN A  DAPCVL GM GGGK+VLASAVVRD  VREHF AGIFW + G+ +K+ LH  L GLVL +A+  G   P L S+E+V   L  F   A S RLVVLDDVWE EV++ALQ T LQLLVTTRDR+VVS+PG  +EVGDM+E+EALEVLRVGCGA   +ELPR++ALQ
Sbjct:  380 LVDGLEHHQLLLAMHGHLRPPTLPDMAAVPRGAISLTDAHVSRPLMLERAIDYLTNTARGDAPCVLTGMAGGGKSVLASAVVRDEKVREHFSAGIFWWRVGRISKDRLHEWLEGLVLRVASASGTTPPMLGSVEEVTFYLKAFCADAESQRLVVLDDVWEPEVVNALQVTELQLLVTTRDRSVVSMPGECIEVGDMEEDEALEVLRVGCGAPKNLELPRLQALQ 603          
BLAST of mRNA_H-paniculata_contig11978.1253.1 vs. uniprot
Match: A0A6H5JLW6_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLW6_9PHAE)

HSP 1 Score: 238 bits (608), Expect = 3.840e-69
Identity = 153/336 (45.54%), Postives = 203/336 (60.42%), Query Frame = 1
Query:  196 MGGGGKTVLASAVVRDTGVREHFCAGIFWLKAGQNAKENLHALLRGLVLELAARDGEV---SP-QLESLEDVKRLLTEFGGKARSLRLVVLDDVWEREVMDALQHTGLQLLVTTRDRTVVSVPGGSVEVGDMDENEALEVLRVGCGAIGT--VELPRVEALQGP-------PQHPNSWRILHDALAARLGTHRPMTVGVRVKAVLEASFGAMADDPDRQKRCVFLAVLAPGTLAPPDMLQDLWNEASGAARAFAKQLVDQSMLQAVGGAYRVHDLVLRFLKPKLKA-NPDRLV-ATSRVVEYCGQLGVLHGYTEDGAKAGGLYSLIALWRSAESIS 1158
            MGGGG+TVL SAVVR+  V E+F  GIF +  G+ AK  L  LL+GL  E+ A        +P  L+SLE V + LT       S RLVVLDDV EREV++AL   GL+L+VTTRDR+VV VPGG +EVGDM E EALE+L +  GA+ +   +LP   A+ G        P  P++W  LH+ L+A+        +   +  VLE SF A+  D D ++R   L VLA G LAP +ML  LW++  G +  F  QLVD+S++QAV   YR+HDLVL F+K KL     +R+V  TSR+ +Y  +L VL  Y E     GGL++L+ LW S E +S
Sbjct:    1 MGGGGETVLVSAVVRELSVLEYFRGGIFLMSVGRGAKNRLLPLLQGLAREMGAAPAHAPHGNPGDLDSLEHVMQHLTTVVSTGTSPRLVVLDDVLEREVVEALLPLGLKLVVTTRDRSVVGVPGGCLEVGDMTEEEALELLMLASGAVSSRIADLPLAMAVIGAMDESRESPHRPDTWTKLHEKLSAKPEFVYEEGLDNGLGNVLELSFSAL--DADAKERFRRLGVLAGGALAPMEMLSYLWDQGPGNSLLFVGQLVDKSLVQAVEHKYRLHDLVLAFVKSKLCCLKMERVVLVTSRLAQYLSRLSVLQEYAEADEMQGGLFALMGLWGSVEELS 334          
BLAST of mRNA_H-paniculata_contig11978.1253.1 vs. uniprot
Match: D7FUD7_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUD7_ECTSI)

HSP 1 Score: 243 bits (620), Expect = 1.950e-67
Identity = 174/439 (39.64%), Postives = 243/439 (55.35%), Query Frame = 1
Query:   31 ILESIRPPSLRKLADVPAGAVTLG-KSYAKRISLLDSAISHVTNPALVDAPCVLVGMGGGGKTVLASAVVRDTGVREHFCAGIFWLKAGQNAKENLHALLRGLVLELAARDGE----VSPQLESLEDVKRLLTEFGGKARSLRLVVLDDVWEREVMDALQHTGLQLLVTTRDRTVVSVPGGSVEVGDMDENEALEVLRVGCGAIGTVE---------------LPRVEALQGPPQHPN-------SWRIL---HDALAARLGTHRPMTVGVRVKAVLEASFGAMADDPDRQKRCVFLAVLAPGTLAPPDMLQDLWN-EASGAARAFAKQLVDQSMLQAVGGA-YRVHDLVLRFLKPKLKANPDRLV-ATSRVVEYCGQLGVLHGY--TEDGAKAGGLYSLIALWRSAESISEKHHV-AAAYKRSLDRVPEGEPWLQASR 1239
            I   I PPSL  +A+VP GA+ L   SY +R ++ + A   +TNP     P  +VG+GGGGK+VLASAVVR   VREHF  GI W++ G+ AK +L  LL+GL  E+ A   +    V   L+SLE V++ L        S RLVVLDDVWEREV+DA    G +LL+TTRDR++V  P G +E+GDM E EALE+LR   G +   +               LP V A+ G             +W  L    + +A ++      +  ++V  VLE +F ++A    +QK  + +AVLA G LAP +ML +LW  E +    A A+ LV + +L AVGG  YR+HDLVL F K  ++A  + +  AT+   +Y G+L V+  Y   E GA   G++ L ALWRS E +S    +  A+Y+ SL  +  GE    A+R
Sbjct:   32 IFTDILPPSLPDMAEVPVGALELPHSSYVERAAVQEVA-DGLTNPEEPRTPYTVVGIGGGGKSVLASAVVRMPSVREHFRGGISWVRVGRGAKNSLLPLLQGLAREVGAAPTDAPHGVPHALDSLEQVQQHLAAVASTRNSPRLVVLDDVWEREVVDAFVPLGFKLLLTTRDRSIVCDPAGRLELGDMTEEEALELLRKTSGTVDPGDDVRMKMTKVVALCGHLPLVLAIAGSMSAVKGKGLTAVAWEELAKEFENVAKKMRARGQQSSSIKV--VLETTFDSLATR--KQKEFLMMAVLAAGALAPIEMLSNLWEIEDAEGTHAEAEGLVSKYLLHAVGGGGYRMHDLVLDFAKTSIRAEEETVKRATALQAQYLGRLDVVESYGDPEHGAGDQGIFFLDALWRSVEKLSGDPQLEVASYRASLGALEWGEATEAAAR 465          
BLAST of mRNA_H-paniculata_contig11978.1253.1 vs. uniprot
Match: A0A6H5KXS7_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXS7_9PHAE)

HSP 1 Score: 232 bits (592), Expect = 9.980e-66
Identity = 177/454 (38.99%), Postives = 242/454 (53.30%), Query Frame = 1
Query:    1 MLEGVENIQSILE---SIRPPSLRKLADVPAGAVTLG-KSYAKRISLLDSAISHVTNPALVDAPCVLVGMGGGGKTVLASAVVRDTGVREHFCAGIFWLKAGQNAKENLHALLRGLVLELAARDGE----VSPQLESLEDVKRLLTEFGGKARSLRLVVLDDVWEREVMDALQHTGLQLLVTTRDRTVVSVPGGSVEVGDMDENEALEVLRVGCGAIGTV----------------ELPRVEALQGPPQHPN-------SWRILHDAL---AARLGTHRPMTVGVRVKAVLEASFGAMADDPDRQKRCVFLAVLAPG-----------------------------TLAPPDMLQDLWN-EASGAARAFAKQLVDQSMLQAVGGA-YRVHDLVLRFLKPKLKANPDRL-VATSRVVEYCGQLGVLHGYT--EDGAKAGGLYSLIALWRSAESIS 1158
            +++G+E+ QS L    S+ PPSL  +A VPAGA+ L   SY +R ++ + A   +T+P    AP  +VGMGGGGK+VLASAVVR   VREHF  GIFW++ G+ AK +L ALL+GL  E+ A   +    V   L+ LE VK+ L          RLVVLDDVWEREV+DA    G ++L+TTRDR+VV VP G +EVGDM E EALE+LR   GA+G                   LP V A+ G             +W+ L + L   A ++      +  +   AVLE SF ++A    +Q+  + LAVLA                                LAP +ML++LW  E +   R  A+ LV + +L AVGG  YRVHDLVL + K +++A+ + +   T+    + G+L VL  Y   E GA    L+ L ALWRS E +S
Sbjct:  180 LVDGLEHHQSFLAALPSLLPPSLPDMAAVPAGALELPCSSYVERAAVQEVA-DGLTSPEDPRAPYTVVGMGGGGKSVLASAVVRKPSVREHFRGGIFWVRVGRGAKSSLLALLQGLAREMGAARTDAPHTVPHVLDGLEQVKQHLAAVASTGTFPRLVVLDDVWEREVVDAFVPLGFKVLLTTRDRSVVVVPAGRLEVGDMTEEEALELLRKSSGAVGQPGDDVRTKMTKVVALCGHLPLVLAIAGSMSVVKGKGLTAVAWKELAENLENVAKKMRARGEQSSSIN--AVLETSFDSLA--VRKQEEFLKLAVLAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALAPIEMLRNLWEIEDAEGTRDEAEGLVSKCLLHAVGGGGYRVHDLVLEYAKTRIRADAEMVRKVTALQAHFLGRLDVLKSYRDPEHGAGNQSLFFLDALWRSVEKLS 628          
BLAST of mRNA_H-paniculata_contig11978.1253.1 vs. uniprot
Match: A0A6H5KU94_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KU94_9PHAE)

HSP 1 Score: 236 bits (603), Expect = 2.150e-65
Identity = 176/430 (40.93%), Postives = 235/430 (54.65%), Query Frame = 1
Query:    4 LEGVE-NIQSILESIR---------PPSLRKLADVPAGAVTLGKSYAKRISLLDSAISHVTNPALVDAPCVLVGMGGGGKTVLASAVVRDTGVREHFCAGIFWLKAGQNAKENLHALLRGLVLELAARDGE----VSPQLESLEDVKRLLTEFGGKARSLRLVVLDDVWEREVMDALQHTGLQLLVTTRDRTVVSVPGGSVEVGDMDENEALEVLRVGCGAIG-------TV---------ELPRVEAL-------QGPPQHPNSWRILHDALAARLGT-HRPMTVGVRVKAVLEASFGAMADDPDRQKRCVF--LAVLAPGTLAPPDMLQDLWN-EASGAARAFAKQLVDQSMLQAVGGA-YRVHDLVLRFLKPKLKANPDRLVATSRV-VEYCGQLGVLHGYT--EDGAKAGGLYSLIALWRSAESIS 1158
            L+G++ +++ +L++I          PPSL  +A VPA AV L  S     + +      +TNP    AP  + GMGGGGK+VLASAVVR + VREHF  GIFWL  G+ AK+ L  LL+GL  ++ A   +    V   L+SLE V+R L        S RLVVLDDVWEREV+DAL   G ++LVTTRDR+VV VP   +E+GDM E EALE+L    G +G       TV          LP V A+       +G      +W  L D L   +      +     +  VLE SF A+      +K+  F   AVLAPG +A  +ML +LW  E +G  R  A+ LV + +LQ VGG  YRVHDLVL F+K K+KA+ +     + +  ++ G+L VL  Y   E GA   GL+ L ALWRS E +S
Sbjct:  105 LQGIDGDVRRVLDAISAKGATGTVLPPSLPDMAKVPAEAVALSDSLYVERAAVRKVADGITNPEEPRAPYTVFGMGGGGKSVLASAVVRKSSVREHFRGGIFWLTVGRGAKKRLLPLLQGLTGDMGAAPTDTPHGVPHVLDSLEQVQRHLGAVASTGTSPRLVVLDDVWEREVVDALLPLGFKVLVTTRDRSVVGVPTRCLELGDMTEEEALELLLKTSGTVGRPGDSVRTVMTKVVTLCGRLPLVLAIAGSLPVVKGKGLTAGAWGKLIDELENVVTKMEASLEDSNSLNVVLETSFDALTF----RKKQAFKKTAVLAPGAVASTEMLLNLWETEDTGGTREDAEGLVSKCLLQDVGGGGYRVHDLVLDFVKIKIKADMEMAKKIAALQAQFLGRLNVLKSYEHPEHGAGNQGLFVLDALWRSVEQLS 530          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig11978.1253.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G6W2_ECTSI1.700e-15661.18NB-ARC and TPR repeat-containing protein n=1 Tax=E... [more]
A0A6H5KMV3_9PHAE9.230e-10952.69NB-ARC domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A6H5LJA6_9PHAE7.120e-7341.19NB-ARC domain-containing protein n=1 Tax=Ectocarpu... [more]
D7G720_ECTSI2.830e-7141.03NB-ARC and TPR repeat-containing protein n=1 Tax=E... [more]
D7G722_ECTSI1.050e-7040.58NB-ARC and TPR repeat-containing protein n=1 Tax=E... [more]
A0A6H5KF10_9PHAE1.490e-6957.14NB-ARC domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A6H5JLW6_9PHAE3.840e-6945.54NB-ARC domain-containing protein n=1 Tax=Ectocarpu... [more]
D7FUD7_ECTSI1.950e-6739.64NB-ARC and TPR repeat-containing protein n=1 Tax=E... [more]
A0A6H5KXS7_9PHAE9.980e-6638.99NB-ARC domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A6H5KU94_9PHAE2.150e-6540.93NB-ARC domain-containing protein n=1 Tax=Ectocarpu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig11978contigH-paniculata_contig11978:1192..3437 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score493.0
Seed ortholog evalue1.4e-136
Seed eggNOG ortholog2880.D7G6W2
KEGG koko:K10407
KEGG Pathwayko05132,map05132
Hectar predicted targeting categoryother localisation
EggNOG free text desc.determination of stomach left/right asymmetry
EggNOG OGsCOG0457@1,KOG1840@2759,KOG4658@1,KOG4658@2759
COG Functional cat.C
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03019,ko04812
Exons3
Model size1284
Cds size1284
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig11978.1253.1prot_H-paniculata_contig11978.1253.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig11978 1192..3437 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928912.2317977-CDS-H-paniculata_contig11978:1191..15841622928912.2317977-CDS-H-paniculata_contig11978:1191..1584Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig11978 1192..1584 -
1691480664.880588-CDS-H-paniculata_contig11978:1191..15841691480664.880588-CDS-H-paniculata_contig11978:1191..1584Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig11978 1192..1584 -
1622928912.447118-CDS-H-paniculata_contig11978:2264..24921622928912.447118-CDS-H-paniculata_contig11978:2264..2492Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig11978 2265..2492 -
1691480664.8918874-CDS-H-paniculata_contig11978:2264..24921691480664.8918874-CDS-H-paniculata_contig11978:2264..2492Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig11978 2265..2492 -
1622928912.4631026-CDS-H-paniculata_contig11978:2774..34371622928912.4631026-CDS-H-paniculata_contig11978:2774..3437Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig11978 2775..3437 -
1691480664.9017587-CDS-H-paniculata_contig11978:2774..34371691480664.9017587-CDS-H-paniculata_contig11978:2774..3437Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig11978 2775..3437 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig11978.1253.1

>prot_H-paniculata_contig11978.1253.1 ID=prot_H-paniculata_contig11978.1253.1|Name=mRNA_H-paniculata_contig11978.1253.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=428bp
MLEGVENIQSILESIRPPSLRKLADVPAGAVTLGKSYAKRISLLDSAISH
VTNPALVDAPCVLVGMGGGGKTVLASAVVRDTGVREHFCAGIFWLKAGQN
AKENLHALLRGLVLELAARDGEVSPQLESLEDVKRLLTEFGGKARSLRLV
VLDDVWEREVMDALQHTGLQLLVTTRDRTVVSVPGGSVEVGDMDENEALE
VLRVGCGAIGTVELPRVEALQGPPQHPNSWRILHDALAARLGTHRPMTVG
VRVKAVLEASFGAMADDPDRQKRCVFLAVLAPGTLAPPDMLQDLWNEASG
AARAFAKQLVDQSMLQAVGGAYRVHDLVLRFLKPKLKANPDRLVATSRVV
EYCGQLGVLHGYTEDGAKAGGLYSLIALWRSAESISEKHHVAAAYKRSLD
RVPEGEPWLQASRVLELMVRRVLNFVR*
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mRNA from alignment at H-paniculata_contig11978:1192..3437-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig11978.1253.1 ID=mRNA_H-paniculata_contig11978.1253.1|Name=mRNA_H-paniculata_contig11978.1253.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2246bp|location=Sequence derived from alignment at H-paniculata_contig11978:1192..3437- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGCTTGAAGGGGTAGAAAATATTCAATCCATTCTGGAGAGCATTAGGCC ACCAAGTCTGCGGAAACTGGCCGACGTACCTGCAGGCGCGGTCACCCTAG GTAAATCATACGCGAAGCGAATTTCTTTACTGGACAGCGCCATCAGCCAC GTCACGAATCCGGCCCTGGTCGATGCTCCCTGTGTGCTTGTCGGCATGGG CGGAGGGGGCAAGACAGTCCTGGCGTCCGCGGTTGTACGGGACACGGGGG TTCGGGAGCACTTTTGTGCGGGAATATTTTGGCTGAAGGCGGGACAAAAC GCTAAGGAAAATCTTCATGCTTTATTGCGAGGGCTGGTCTTGGAGTTGGC GGCAAGGGACGGGGAAGTTTCTCCCCAGCTCGAAAGCTTGGAAGACGTGA AGCGTCTTCTAACTGAATTTGGTGGGAAAGCCCGCTCACTGCGCTTGGTC GTGTTGGACGACGTGTGGGAGAGGGAAGTCATGGATGCTCTACAACACAC GGGGTTGCAGCTGCTGGTAACCACGCGCGACCGTACCGTGGTATCTGTGC CAGGAGGGTCCGTTGAGGTAGGGGACATGGACGAGAACGAGGCGCTGGAG GTTCTGAGGGTCGGTTGTGGAGCGATTGGAACAGTTGAACTTCCGCGAGT GGAAGCGTTGCAGGTGACAAGTCTGGTCTTCGTGTTGATTTCTGGTGGCG GACAGATCCTAATACCGGTAATAACATACCTCGAAGCGCATATTTGGGAG GACAGCTTGGTGCCTCGGACAGCGTTCGTGTATCCACCCTCCGTGTTCGA CTGTTGGCGGTAGTTTTGCGGTTGTTCCCAGGATGCATGTTACTGTTGAT CGCACATGACACAAACGTCCACCTCGTCGTTCCAGGTCGCCGCTGACTGT GGGAAGCTGGCTCTCGCGCTTAACCTCGCCGCGCCGCTGCTAAAGGGCCC TCCACAACATCCGAATTCTTGGCGCATTTTACATGATGCCCTGGCAGCGC GATTGGGGACGCACCGTCCCATGACTGTAGGAGTGCGTGTGAAAGCTGTC CTTGAGGCAAGCTTCGGTGCCATGGCAGATGACCCCGACAGGCAGAAGAG ATGCGTGTTCCTTGCGGTACTTGCTCCGGGTACGCTTGCACCACCCGACA TGTTACAGGATTTGTGGAACGAGGTGCGGTGCTGAGGTAGGGGAAGAGTA GGAGGAGTAGCCTGGCATAGTTCAGTAGTTGGTGTCATGCCCAGAGTATG TTTCTCGAGCCCAGCAGGCGGAGGTATGCCGCGTTTTACTTGTATTGGTC TACGAAATGTGTGGGGAATATTCTTCTTGATGTCCAACATGGCGCGTCCT TACTCGCTATGGCCTACGCAAGCTCGCTGATTCCAGGTTAAGGTTCACGC CACGGGTGTTCTCAGAAGCTCAAATCCGGCAACTCGCAGTGTCTGACTAC AGTGAACAGATCCGCAGATGACGCAAAGTCACGATCAGGAGAGTTGGGAG AGAGTTGATTATTGTTTCATGCCCATAAATAGTTGCTCCGAAGCGCCCTC CATGCCAACATAGTGCATATCCAGGAATAAGACCAGGATGTGACCAGCCG ACCGCACCTATCTCGAAGGGCTCCTAGAGCTCAGATGTATGTACGGGCTT GTAGACTGACTTCACATGGTAAATGTTTGCAGATCGGTGGACGCTTGGGC GCAGAGTAGAACTGGTCATGAAGAAGACACTGTTGATGGGGCACGTTAAA AAATGACCCGACTACTGGTTGCGTGATTCAAGTTTGTGATCTTGACGTGA GGTTTGATTCTTCTTGGTGTTCTCCCGTGTGCTCAATTACGCGTCCTCAA CAGGCCTCTGGGGCTGCGCGCGCATTTGCTAAACAGCTTGTGGATCAGTC CATGCTCCAAGCTGTAGGAGGTGCTTACCGCGTTCACGACCTTGTCTTGC GTTTCCTTAAGCCCAAACTCAAGGCCAATCCCGATCGGCTCGTAGCAACC TCGCGCGTTGTGGAATACTGCGGCCAGCTAGGGGTTCTGCATGGATATAC CGAGGATGGGGCGAAGGCTGGCGGTTTGTACTCCCTGATCGCCCTTTGGA GGTCGGCGGAGAGCATCTCGGAGAAGCACCACGTTGCAGCTGCCTACAAG AGGAGCCTGGACCGGGTACCGGAGGGTGAACCGTGGCTGCAGGCTAGCCG TGTTCTAGAGCTCATGGTGCGGCGCGTGTTGAACTTTGTCCGTTGA
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Coding sequence (CDS) from alignment at H-paniculata_contig11978:1192..3437-

>mRNA_H-paniculata_contig11978.1253.1 ID=mRNA_H-paniculata_contig11978.1253.1|Name=mRNA_H-paniculata_contig11978.1253.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2568bp|location=Sequence derived from alignment at H-paniculata_contig11978:1192..3437- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGCTTGAAGGGGTAGAAAATATTCAATCCATTCTGGAGAGCATTAGGCC
ACCAAGTCTGCGGAAACTGGCCGACGTACCTGCAGGCGCGGTCACCCTAG
GTAAATCATACGCGAAGCGAATTTCTTTACTGGACAGCGCCATCAGCCAC
GTCACGAATCCGGCCCTGGTCGATGCTCCCTGTGTGCTTGTCGGCATGGG
CGGAGGGGGCAAGACAGTCCTGGCGTCCGCGGTTGTACGGGACACGGGGG
TTCGGGAGCACTTTTGTGCGGGAATATTTTGGCTGAAGGCGGGACAAAAC
GCTAAGGAAAATCTTCATGCTTTATTGCGAGGGCTGGTCTTGGAGTTGGC
GGCAAGGGACGGGGAAGTTTCTCCCCAGCTCGAAAGCTTGGAAGACGTGA
AGCGTCTTCTAACTGAATTTGGTGGGAAAGCCCGCTCACTGCGCTTGGTC
GTGTTGGACGACGTGTGGGAGAGGGAAGTCATGGATGCTCTACAACACAC
GGGGTTGCAGCTGCTGGTAACCACGCGCGACCGTACCGTGGTATCTGTGC
CAGGAGGGTCCGTTGAGGTAGGGGACATGGACGAGAACGAGGCGCTGGAG
GTTCTGAGGGTCGGTTGTGGAGCGATTGGAACAGTTGAACTTCCGCGAGT
GGAAGCGTTGCAGATGCTTGAAGGGGTAGAAAATATTCAATCCATTCTGG
AGAGCATTAGGCCACCAAGTCTGCGGAAACTGGCCGACGTACCTGCAGGC
GCGGTCACCCTAGGTAAATCATACGCGAAGCGAATTTCTTTACTGGACAG
CGCCATCAGCCACGTCACGAATCCGGCCCTGGTCGATGCTCCCTGTGTGC
TTGTCGGCATGGGCGGAGGGGGCAAGACAGTCCTGGCGTCCGCGGTTGTA
CGGGACACGGGGGTTCGGGAGCACTTTTGTGCGGGAATATTTTGGCTGAA
GGCGGGACAAAACGCTAAGGAAAATCTTCATGCTTTATTGCGAGGGCTGG
TCTTGGAGTTGGCGGCAAGGGACGGGGAAGTTTCTCCCCAGCTCGAAAGC
TTGGAAGACGTGAAGCGTCTTCTAACTGAATTTGGTGGGAAAGCCCGCTC
ACTGCGCTTGGTCGTGTTGGACGACGTGTGGGAGAGGGAAGTCATGGATG
CTCTACAACACACGGGGTTGCAGCTGCTGGTAACCACGCGCGACCGTACC
GTGGTATCTGTGCCAGGAGGGTCCGTTGAGGTAGGGGACATGGACGAGAA
CGAGGCGCTGGAGGTTCTGAGGGTCGGTTGTGGAGCGATTGGAACAGTTG
AACTTCCGCGAGTGGAAGCGTTGCAGGGCCCTCCACAACATCCGAATTCT
TGGCGCATTTTACATGATGCCCTGGCAGCGCGATTGGGGACGCACCGTCC
CATGACTGTAGGAGTGCGTGTGAAAGCTGTCCTTGAGGCAAGCTTCGGTG
CCATGGCAGATGACCCCGACAGGCAGAAGAGATGCGTGTTCCTTGCGGTA
CTTGCTCCGGGTACGCTTGCACCACCCGACATGTTACAGGATTTGTGGAA
CGAGGGCCCTCCACAACATCCGAATTCTTGGCGCATTTTACATGATGCCC
TGGCAGCGCGATTGGGGACGCACCGTCCCATGACTGTAGGAGTGCGTGTG
AAAGCTGTCCTTGAGGCAAGCTTCGGTGCCATGGCAGATGACCCCGACAG
GCAGAAGAGATGCGTGTTCCTTGCGGTACTTGCTCCGGGTACGCTTGCAC
CACCCGACATGTTACAGGATTTGTGGAACGAGGCCTCTGGGGCTGCGCGC
GCATTTGCTAAACAGCTTGTGGATCAGTCCATGCTCCAAGCTGTAGGAGG
TGCTTACCGCGTTCACGACCTTGTCTTGCGTTTCCTTAAGCCCAAACTCA
AGGCCAATCCCGATCGGCTCGTAGCAACCTCGCGCGTTGTGGAATACTGC
GGCCAGCTAGGGGTTCTGCATGGATATACCGAGGATGGGGCGAAGGCTGG
CGGTTTGTACTCCCTGATCGCCCTTTGGAGGTCGGCGGAGAGCATCTCGG
AGAAGCACCACGTTGCAGCTGCCTACAAGAGGAGCCTGGACCGGGTACCG
GAGGGTGAACCGTGGCTGCAGGCTAGCCGTGTTCTAGAGCTCATGGTGCG
GCGCGTGTTGAACTTTGTCCGTTGAGCCTCTGGGGCTGCGCGCGCATTTG
CTAAACAGCTTGTGGATCAGTCCATGCTCCAAGCTGTAGGAGGTGCTTAC
CGCGTTCACGACCTTGTCTTGCGTTTCCTTAAGCCCAAACTCAAGGCCAA
TCCCGATCGGCTCGTAGCAACCTCGCGCGTTGTGGAATACTGCGGCCAGC
TAGGGGTTCTGCATGGATATACCGAGGATGGGGCGAAGGCTGGCGGTTTG
TACTCCCTGATCGCCCTTTGGAGGTCGGCGGAGAGCATCTCGGAGAAGCA
CCACGTTGCAGCTGCCTACAAGAGGAGCCTGGACCGGGTACCGGAGGGTG
AACCGTGGCTGCAGGCTAGCCGTGTTCTAGAGCTCATGGTGCGGCGCGTG
TTGAACTTTGTCCGTTGA
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