mRNA_H-paniculata_contig5187.12526.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig5187.12526.1 vs. uniprot
Match: A0A6H5JIM0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIM0_9PHAE) HSP 1 Score: 184 bits (466), Expect = 7.770e-53 Identity = 97/211 (45.97%), Postives = 130/211 (61.61%), Query Frame = 1
Query: 25 IIHIDEAWFNQIRDRDRVRMFPGEERVGSSNVQHKSHVPKVMFICAVSRPDPSRDFDGNIRIWRFCVIKQAQRNSAQ-------------------RERG----QQYEFDVTIDAEWYQEWCKD-FLSASKE*MPWLEGEEMVAQKDGANPHMRKDTPQKLNELGRDGGWNINF------SPDLSINDVGFFASLKSRVWREPYGTIDDLV 567
++H+DE+WF +R++++VR+F GE+ G V H+SH+PK+M I A +RPDP+ DFDG I IWR CVI+ AQR+S + R R ++YEFD TIDAEWY++W D L A KE MPWL + +V Q+DGA+PH K P+ LN G GW + SPDL+IND+G FASLK RVW +ID+LV
Sbjct: 154 VVHLDESWFYLMREKEKVRVFSGEDVPGPPRVPHESHLPKIMVIVANARPDPAHDFDGKIGIWRICVIETAQRSSKKSTSSTAPSTRSGWREPPHGRNRPAIVQEEYEFDCTIDAEWYKDWYIDVLLPAIKEKMPWLRSKRVVVQQDGASPHTGKGNPEILNSAGIARGWLVELVTQPAQSPDLNINDLGCFASLKPRVWGVNAFSIDELV 364
BLAST of mRNA_H-paniculata_contig5187.12526.1 vs. uniprot
Match: A0A6A4Z066_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4Z066_9STRA) HSP 1 Score: 122 bits (307), Expect = 2.480e-30 Identity = 83/248 (33.47%), Postives = 125/248 (50.40%), Query Frame = 1
Query: 19 FQIIHIDEAWFNQIRDRDRVRMFPGEERVGSSNVQHKSHVPKVMFICAVSRPDPSRDFDGNIRIWRFCVIKQAQRNSAQRERGQQYEFDVTIDAEWYQEWCKD-FLSASKE*MPWLEGEEMVAQKDGANPHMRKDTPQKLNELGRDGGWNINF------SPDLSINDVGFFASLKSRVWREPYGTIDDLVEGVKSMYDAYEAETLERVWKRLFKRYNQVLKALGGSDFEVQHAETKERQRAGSLPKSV 741
+ ++H+DE WFN +D +V + GEE V + K +PKVMF+CAV RP + FDG I IW F A RNS R G V +D Y+++ + + A KE P + + +V Q D A PH D L ++ D GW SPDL++ D+GFFAS++S ++ ++DD++ +D E L V+ L VL+ GG+ F++ H +RAG+L +V
Sbjct: 2 WDVVHLDEKWFNADKDCRKVYLVDGEE-VLRRTCKSKRFIPKVMFLCAVGRPRQADGFDGKIGIWPFVSKTPAVRNSRNRPAGTMVTTLVNVDGATYRDYVLNKVVPAIKEKFPSV-SKRVVLQHDNATPHRSIDDAA-LAQVSTD-GWTFVVRRQPPNSPDLNVLDLGFFASIQSLQYKVVSRSVDDVIASTLMAFDMLNDEKLANVFLTLQAVMRLVLEHRGGNHFKLPHLHKDAMRRAGTLMLNV 245
BLAST of mRNA_H-paniculata_contig5187.12526.1 vs. uniprot
Match: W2NW41_PHYPR (HTH_Tnp_Tc3_2 domain-containing protein n=4 Tax=Phytophthora parasitica TaxID=4792 RepID=W2NW41_PHYPR) HSP 1 Score: 120 bits (301), Expect = 5.000e-28 Identity = 84/259 (32.43%), Postives = 132/259 (50.97%), Query Frame = 1
Query: 1 ITFRSGFQIIHIDEAWFNQIRDRDRVRMFPGEERVGSSNVQHKSHVPKVMFICAVSRP--DPSRD--FDGNIRIWRFCVIKQAQRNSAQRERGQQYEFDV-TIDAEWYQEW-CKDFLSASKE*MPWLEGEEMV-AQKDGANPHMRKDTPQKLNELGRDGGWNINF------SPDLSINDVGFFASLKSRVWREPYGTIDDLVEGVKSMYDAYEAETLERVWKRLFKRYNQVLKALGGSDFEVQHAETKERQRAGSLPKS 738
+ F F ++HIDE WFN+ DR + EE Q K + K MFI AV+RP D R FDG I IW F +A+R S R +G +V ++D E Y+ D + A K P + + Q+D A PH+ D P + GR GGW+I SPDL++ D+G+F S++S ++ ++ L++ V S + A +A+TL +++ L +++A GG++++ H ++AG LP S
Sbjct: 157 MVFADMFDVVHIDEKWFNEDTDRKCYYLDADEEEPVRQR-QSKRFISKTMFIAAVARPRYDAHRKQAFDGKIGIWAFAEEYEAKRTSKNRPKGTIVLRNVESVDREAYKATHIGDIIPAIKAKWPRSGKKRTIYIQQDNAKPHVSVDDPDIM-AAGRSGGWDIRMRCQPPNSPDLNVLDLGYFRSIQSLQYQTECRGVEALLDAVNSAFSAMKADTLNKIFMTLQTCMECIIRANGGNNYKTPHRGKDALKKAGQLPVS 413
BLAST of mRNA_H-paniculata_contig5187.12526.1 vs. uniprot
Match: W2QAD0_PHYPN (Uncharacterized protein n=1 Tax=Phytophthora parasitica (strain INRA-310) TaxID=761204 RepID=W2QAD0_PHYPN) HSP 1 Score: 117 bits (294), Expect = 1.310e-27 Identity = 83/259 (32.05%), Postives = 130/259 (50.19%), Query Frame = 1
Query: 1 ITFRSGFQIIHIDEAWFNQIRDRDRVRMFPGEERVGSSNVQHKSHVPKVMFICAVSRP--DPSRD--FDGNIRIWRFCVIKQAQRNSAQRERGQQYEFDV-TIDAEWYQEWC-KDFLSASKE*MPWLEGEEMV-AQKDGANPHMRKDTPQKLNELGRDGGWNINF------SPDLSINDVGFFASLKSRVWREPYGTIDDLVEGVKSMYDAYEAETLERVWKRLFKRYNQVLKALGGSDFEVQHAETKERQRAGSLPKS 738
+ F F ++HIDE WFN+ DR + EE Q K + K MFI AV+RP D R FDG I IW F +A+R S R +G +V ++D E Y+ D + A K P + + Q+D A PH+ D P + GR GGW+I SPDL++ D+G+F S++S ++ ++ L++ V S + A +A+TL +++ L + +A GG++++ H ++ G LP S
Sbjct: 61 VVFADMFDVVHIDEKWFNEDTDRKCYYLDADEEEPVRQR-QSKRFISKTMFIAAVARPRYDAHRKQAFDGKIGIWAFAEEYEAKRTSKNRPKGTIVLRNVESVDREAYKATLIGDIIPAIKAKWPRSGKKRTIYIQQDNAKPHVSVDDPDIM-AAGRSGGWDIRMRCQPPNSPDLNVLDLGYFRSIQSLQYQTECRGVEALLDTVNSAFSAMKADTLSKIFMTLQTCMECITRANGGNNYKTPHRGKDALKKTGQLPVS 317
BLAST of mRNA_H-paniculata_contig5187.12526.1 vs. uniprot
Match: UPI0020091A08 (uncharacterized protein LOC125206097 n=1 Tax=Salvia hispanica TaxID=49212 RepID=UPI0020091A08) HSP 1 Score: 119 bits (298), Expect = 1.370e-27 Identity = 79/256 (30.86%), Postives = 122/256 (47.66%), Query Frame = 1
Query: 1 ITFRSGFQIIHIDEAWFNQIRDRDRVRMFPGEERVGSSNVQHKSHVPKVMFICAVSRPDPSRD----FDGNIRIWRFCVIKQAQRNSAQRERGQQYEFDVTIDAEWYQEWC--KDFLSASKE*MPWLEGEEMVAQKDGANPHMRKDTPQKLNELGRDGGWNINF------SPDLSINDVGFFASLKSRVWREPYGTIDDLVEGVKSMYDAYEAETLERVWKRLFKRYNQVLKALGGSDFEVQHAETKERQRAGSLP 732
+ F I+HIDE WF + DR + P E+ S + K ++ KVMF+CAVSRP + +DG + I+ F AQR S R+RG +T + C + A K P +E+ Q+D A PH+ P+ + G+ I+ SPD +I D+GFF +++S ++P +D+LVE V Y+ +TL RV+ L Q+L+ G + ++V H +R G LP
Sbjct: 161 VHFHGMHNIVHIDEKWFYMTKTSDRYYLLPDEDEPYRS-CKSKRYITKVMFMCAVSRPQFDSEGQPTYDGKVGIFPFTEAVPAQRKSKNRDRGTLETKPITTLNKEVMRGCIIHKIIPAIKAKWPDWASKEIYIQQDNATPHITATDPE-FQAIANSDGFKIHLICQPPNSPDTNILDLGFFRAIQSLQHQKPCRNVDELVENVCKAYEELTPQTLNRVFLSLQACLTQILQFRGDNSYKVPHMNKDRLERTGGLP 414
BLAST of mRNA_H-paniculata_contig5187.12526.1 vs. uniprot
Match: A0A6A4ECW5_9STRA (Uncharacterized protein n=3 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A4ECW5_9STRA) HSP 1 Score: 117 bits (293), Expect = 7.820e-27 Identity = 79/253 (31.23%), Postives = 127/253 (50.20%), Query Frame = 1
Query: 19 FQIIHIDEAWFNQIRDRDRVRMFPGEERVGSSNVQHKSHVPKVMFICAVSRPDPSRD----FDGNIRIWRFCVIKQAQRNSAQRERGQQYEFDV-TIDAEWYQEWCKD-FLSASKE*MP-WLEGEEMVAQKDGANPHMRKDTPQKLNELGRDGGWNINF------SPDLSINDVGFFASLKSRVWREPYGTIDDLVEGVKSMYDAYEAETLERVWKRLFKRYNQVLKALGGSDFEVQHAETKERQRAGSLPKS 738
+ ++H+DE WFN+ +D+ + PGE V + K + K MF+ AV+RP + FDG I IW F AQ +S R G ++ T++ E Y+ + + + A K P W + +V Q+D A PH + P L G GWNI SPDL+ D+G+FAS+++ +RE I L++ ++ Y A E L+ + L V++A G +++++ HA + +R G LP S
Sbjct: 192 YNVVHVDEKWFNEDKDKKVFYLLPGET-VPHRERKSKRFIGKTMFLAAVARPRFDNNGQVLFDGKIGIWDFTHKVDAQHSSKNRPAGTLETKNLDTVNREVYKRYLLEHIIPAIKSKWPVWDKSSPIVIQQDNATPHCQPTDPDIL-AAGVADGWNIRLAFQPANSPDLNTLDLGYFASIQALPYREDCCDIVQLIQAIRKSYAALEVYKLDNITLTLQSSMECVMRAAGSNEYKLPHAGKSKIRREGKLPHS 442
BLAST of mRNA_H-paniculata_contig5187.12526.1 vs. uniprot
Match: A0A397EFX4_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397EFX4_9STRA) HSP 1 Score: 114 bits (284), Expect = 1.710e-26 Identity = 83/260 (31.92%), Postives = 127/260 (48.85%), Query Frame = 1
Query: 4 TFRSGFQIIHIDEAWFNQIRDRDRVRMFPGE---ERVGSSNVQHKSHVPKVMFICAVSRPDPSRD----FDGNIRIWRFCVIKQAQRNSAQRERGQQYEFDVTIDAEWYQEWC-KDFLSASKE*MPWLEGEEMVAQKDGANPHMRKDTPQKLNELGRDGGWNINF------SPDLSINDVGFFASLKSRVWREPYGTIDDLVEGVKSMYDAYEAETLERVWKRLFKRYNQVLKALGGSDFEVQHAETKERQRAGSLPKSV 741
F S + ++H+DE WFN DR +V + PGE +R S K +PKVMF+ AVSRP D FDG + +W F A RNS R G V ++A Y+++ + A K P + +V Q D A PH T +L + D GWN SPDL+ D+GFFAS++S ++ T+DD++ + ++ + LE V+ +L+ GG+ + + H + +RAG L ++V
Sbjct: 51 AFCSLWDVVHLDEKWFNADTDRRKVYLVPGEIPPQRTWKS----KRFIPKVMFLAAVSRPRFDHDRGVLFDGKVGMWPFVESIPAVRNSRNRPAGTMATSLVNVNATVYRDYVINKVIPAIKASFPSA-NKRVVLQHDNATPHS-SITDAELEAVSTD-GWNFVLRRQPPNSPDLNALDLGFFASIQSLQYKSMSRTVDDVIRSTLAAFEELSYQKLESVFLTFQSVMRLILEHDGGNHYVLPHLKKAALRRAGLLMQNV 303
BLAST of mRNA_H-paniculata_contig5187.12526.1 vs. uniprot
Match: UPI001C27ABF3 (uncharacterized protein LOC121745765 n=1 Tax=Salvia splendens TaxID=180675 RepID=UPI001C27ABF3) HSP 1 Score: 114 bits (286), Expect = 6.590e-26 Identity = 76/256 (29.69%), Postives = 121/256 (47.27%), Query Frame = 1
Query: 1 ITFRSGFQIIHIDEAWFNQIRDRDRVRMFPGEERVGSSNVQHKSHVPKVMFICAVSRP----DPSRDFDGNIRIWRFCVIKQAQRNSAQRERGQQYEFDVTIDAEWYQEWC--KDFLSASKE*MPWLEGEEMVAQKDGANPHMRKDTPQKLNELGRDGGWNINF------SPDLSINDVGFFASLKSRVWREPYGTIDDLVEGVKSMYDAYEAETLERVWKRLFKRYNQVLKALGGSDFEVQHAETKERQRAGSLP 732
+ ++S ++HIDE WF + D + P E+ S + K ++ KVMF+CAVSRP D +DG + I+ F + AQR S R RG + + C + A K P +++ Q+D A PH+ + G+ I SPD +I D+GFF +++S +P T+D+LV V S++ +TL RV+ RL ++L+ GG+ ++V H T QR +P
Sbjct: 160 VQYQSMHNVVHIDEKWFYMTKVSDIYYLLPDEDEPYRS-CKSKRYITKVMFMCAVSRPQFGMDGQATYDGKVGIFPFTEVLLAQRKSKNRARGTMETKSINSVTKAVMRDCLINKIIPAIKAKWPVWASKDIYIQQDNATPHISA-MDADFQVVANSDGFKIQLICQPPNSPDTNILDLGFFRAIQSLQHEKPCNTVDELVGNVCSLFAELSPQTLNRVFLRLQACLTEILQCRGGNGYKVPHINTDRLQRTVGIP 413
BLAST of mRNA_H-paniculata_contig5187.12526.1 vs. uniprot
Match: A0A485K8K3_9STRA (Aste57867_1744 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485K8K3_9STRA) HSP 1 Score: 111 bits (278), Expect = 1.150e-25 Identity = 83/258 (32.17%), Postives = 129/258 (50.00%), Query Frame = 1
Query: 1 ITFRSGFQIIHIDEAWFNQIRDRDRVRMFPGEERVGSSNVQHKSHVPKVMFICAVSRP--DPSRD--FDGNIRIWRFCVIKQAQRNSAQRERGQQYEFDVTIDAEWYQEWCKD-FLSASKE*MPWLEGEEMVAQKDGANPHMRKDTPQKLNELGRDGGWNINF------SPDLSINDVGFFASLKSRVWREPYGTIDDLVEGVKSMYDAYEAETLERVWKRLFKRYNQVLKALGGSDFEVQHAETKERQRAGSLPKSV 741
+ F S + +IHIDE WFN +D+ +V + PGE S + K + KVMF+ +RP D SR FDG + +W F + AQR S R G V ++A Y+E+ + + A K P + +V Q D A PH T L + +D GW SPDL++ D+GFFAS++S ++ T+DD++ + ++ E+LE V+ VL+ G + F++ H + +RAG L +V
Sbjct: 44 VEFDSLWDVIHIDEKWFNAEKDQRKVYLVPGESPQRRS-WKSKRFITKVMFLAPAARPRYDVSRGAVFDGKVGMWPFVSLVPAQRRSRNRPAGTLVTALVNVNATIYREFIVNKVVPAIKASFPSA-NKRVVLQHDNATPH-GSITDAVLASVSKD-GWTFVMRQQPPNSPDLNVLDLGFFASIQSLQYKSMSRTVDDVIRSTLAAFEHLSYESLENVFLTFQAVLRLVLEHDGDNHFKLPHLKKASLRRAGLLMSNV 297
BLAST of mRNA_H-paniculata_contig5187.12526.1 vs. uniprot
Match: UPI001C264D25 (uncharacterized protein LOC121774216 n=2 Tax=Salvia splendens TaxID=180675 RepID=UPI001C264D25) HSP 1 Score: 112 bits (280), Expect = 3.090e-25 Identity = 75/256 (29.30%), Postives = 121/256 (47.27%), Query Frame = 1
Query: 1 ITFRSGFQIIHIDEAWFNQIRDRDRVRMFPGEERVGSSNVQHKSHVPKVMFICAVSRP----DPSRDFDGNIRIWRFCVIKQAQRNSAQRERGQQYEFDVTIDAEWYQEWC--KDFLSASKE*MPWLEGEEMVAQKDGANPHMRKDTPQKLNELGRDGGWNINF------SPDLSINDVGFFASLKSRVWREPYGTIDDLVEGVKSMYDAYEAETLERVWKRLFKRYNQVLKALGGSDFEVQHAETKERQRAGSLP 732
+ F+ ++HIDE WF + DR + P E+ S + K ++ KVMF+CAVSRP + +DG + I+ F + AQR S R RG + + C + A K P +++ Q+D A PH+ P+ + + G++I SPD +I D+GFF +++S +P T+D+LV V S + +TL +V+ L ++L GG+ ++V H R G LP
Sbjct: 123 VQFQGMHNVVHIDEKWFYMTKVSDRYYLLPDEDEPYRS-CKSKRYITKVMFMCAVSRPQFDANGQATYDGKVGIFPFTEVLPAQRKSKNRARGTMETKAINSVTKAVMRDCLIHKIIPAIKAKWPVGASKDIYIQQDNATPHITAMDPE-FQAVAKSDGFDIQLICQPPNSPDTNILDLGFFRAIQSLQHEKPCKTVDELVGNVCSSFTELSPQTLNKVFLSLQACLTEILHCRGGNGYKVPHINKDRLHRNGGLP 376 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5187.12526.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig5187.12526.1 >prot_H-paniculata_contig5187.12526.1 ID=prot_H-paniculata_contig5187.12526.1|Name=mRNA_H-paniculata_contig5187.12526.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=130bp MPWLEGEEMVAQKDGANPHMRKDTPQKLNELGRDGGWNINFSPDLSINDVback to top mRNA from alignment at H-paniculata_contig5187:4123..4881+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig5187.12526.1 ID=mRNA_H-paniculata_contig5187.12526.1|Name=mRNA_H-paniculata_contig5187.12526.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=759bp|location=Sequence derived from alignment at H-paniculata_contig5187:4123..4881+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig5187:4123..4881+ >mRNA_H-paniculata_contig5187.12526.1 ID=mRNA_H-paniculata_contig5187.12526.1|Name=mRNA_H-paniculata_contig5187.12526.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=780bp|location=Sequence derived from alignment at H-paniculata_contig5187:4123..4881+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |