mRNA_H-paniculata_contig11978.1253.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig11978.1253.1 vs. uniprot
Match: D7G6W2_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6W2_ECTSI) HSP 1 Score: 489 bits (1258), Expect = 1.700e-156 Identity = 260/425 (61.18%), Postives = 314/425 (73.88%), Query Frame = 1 Query: 1 MLEGVENIQSIL---ESIRPPSLRKLADVPAGAVTLGKSYAKRISLLDSAISHVTNPALVDAPCVLVGMGGGGKTVLASAVVRDTGVREHFCAGIFWLKAGQNAKENLHALLRGLVLELAARDGEVSPQLESLEDVKRLLTEFGGKARSLRLVVLDDVWEREVMDALQHTGLQLLVTTRDRTVVSVPGGSVEVGDMDENEALEVLRVGCGAIGTVELPRVEALQGPPQHPNSWRILHDALA----ARLGTHRPMTVGVRVKAVLEASFGAMADDPDRQKRCVFLAVLAPGTLAPPDMLQDLWNEASGAARAFAKQLVDQSMLQAVGGAYRVHDLVLRFLKPKLKANPDRLVATSRVVEYCGQLGVLHGYTEDGAKAGGLYSLIALWRSAESISEKHHVAAAYKRSLDRVPEGEPWLQASRVLELM 1254 +++G+E+ Q +L +RPP+L +A VPAG ++L + R SLL AI ++TN A+ DAPCVL GM G GK+VLASAVVRD VREHF AG+FW++A ++AK+ LHA L G L +A+ G SP L S+E+V R L + S RLVVLDDVWERE++DAL+ TGLQLLVTTRDR+VVS+PG VEVGDM+E+EALEVLRVGCGA +ELPR EALQGPPQ P SWR LH+AL+ RLGT R M V RV AVLE S GAMADDP +Q+RC+FLAVLAPGTLAP DML+DLW+EA GA + FA QLVDQSMLQ G A+RVHDLVL FLKPKLKA+P+R +ATSR EY GQL VL Y DG + G+Y+L+ALWRS E + + VAA Y +L VPE PW QA RVLELM Sbjct: 189 LVDGLEHHQLLLAVYRQLRPPTLPAMASVPAGPISLTDGHISRPSLLGRAIGYLTNTAVGDAPCVLTGMAGAGKSVLASAVVRDEKVREHFHAGMFWVRA-RDAKDQLHACLEGFALRVASTSGTTSPGLGSVEEVTRYLKAVCADSVSPRLVVLDDVWEREIVDALKLTGLQLLVTTRDRSVVSMPGECVEVGDMEEDEALEVLRVGCGASKNLELPRAEALQGPPQDPKSWRTLHEALSKAMSTRLGTDRIMAVPKRVDAVLEVSLGAMADDPAKQQRCLFLAVLAPGTLAPSDMLEDLWDEAPGATKTFAAQLVDQSMLQPAGDAFRVHDLVLLFLKPKLKADPNRPIATSRFAEYLGQLKVLRRYLGDGETSDGVYALMALWRSVEDLVGESRVAAVYMNNLQGVPEHAPWRQAGRVLELM 612
BLAST of mRNA_H-paniculata_contig11978.1253.1 vs. uniprot
Match: A0A6H5KMV3_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMV3_9PHAE) HSP 1 Score: 339 bits (869), Expect = 9.230e-109 Identity = 196/372 (52.69%), Postives = 245/372 (65.86%), Query Frame = 1 Query: 1 MLEGVENIQSIL---ESIRPPSLRKLADVPAGAVTLGKSYAKRISLLDSAISHVTNPALVDAPCVLVGMGGGGKTVLASAVVRDTGVREHFCAGIFWLKAGQNAKENLHALLRGLVLELAARDGEVSPQLESLEDVKRLLTEFGGKARSLRLVVLDDVWEREVMDALQHTGLQLLVTTRDRTVVSVPGGSVEVGDMDENEALEVLRVGCGAIGTVELPRVEALQGPPQHPNSWRILHDALAARLGTHRPMTVGVRVKAVLEASFGAMADDPDRQKRCVFLAVLAPGTLAPPDMLQDLWNEASGAARAFAKQLVDQSMLQAVGGAYRVHDLVLRFLKPKLKANPDRLVATSRVVEYCGQLGVLHGYTEDGAKA 1107 +++G+E+ Q +L +RPP+L +A VPAG ++L + R SLL AI ++TN A+ DAPCVL GM G GK+VLASAVV+ VREHF AG++W++A ++AK+ LHA L GL L +A+ G +P L S+E+V R L + S RL+VLDDVWEREV+D L+ TGLQLLVTTRDR+VVS+PG VEVGDM E+EALE+LRVGCGA +ELPR E LQ + G R MTV RV AVLE S GAMA+DP +Q+RC+FLA A GAA+ FA+QLVDQSMLQ G A RVHDLVL FLKPKLKA+ R + TSR+ EY G L VL Y EDG +A Sbjct: 170 LVDGLEHQQLLLAVYRQLRPPTLPAMASVPAGPISLTDGHISRPSLLGRAIGYLTNTAVGDAPCVLTGMAGAGKSVLASAVVQVEKVREHFHAGMYWVRA-RDAKDQLHACLEGLALRVASTSGTTAPGLGSVEEVTRYLKAVCADSVSPRLIVLDDVWEREVVDTLKLTGLQLLVTTRDRSVVSMPGECVEVGDM-EDEALELLRVGCGASKNLELPRAEVLQ---------------VVVDCGNDRIMTVPKRVDAVLEVSLGAMAEDPAKQRRCLFLA-------------------APGAAKTFARQLVDQSMLQPAGDALRVHDLVLLFLKPKLKADSSRPITTSRIAEYLGHLKVLRRYVEDGRRA 505
BLAST of mRNA_H-paniculata_contig11978.1253.1 vs. uniprot
Match: A0A6H5LJA6_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LJA6_9PHAE) HSP 1 Score: 248 bits (632), Expect = 7.120e-73 Identity = 173/420 (41.19%), Postives = 241/420 (57.38%), Query Frame = 1 Query: 67 LADVPAGAVTLGKSYAKRISLLDSAISHVTNPALVDAPCVLVGMGGGGKTVLASAVVRDTGVREHFCAGIFWLKAGQNAKENLHALLRGLVLELAARDGE----VSPQLESLEDVKRLLTEFGGKARSLRLVVLDDVWEREVMDALQHTGLQLLVTTRDRTVVSVPGGSVEVGDMDENEALEVLRVGCGAIGTV----------------ELPRVEALQGPPQHPN-------SWRIL---HDALAARLGTHRPMTVGVRVKAVLEASFGAMADDPDRQKRCVFLAVLAPGTLAPPDMLQDLWN-EASGAARAFAKQLVDQSMLQAVGGA-YRVHDLVLRFLKPKLKANPDRLV-ATSRVVEYCGQLGVLHGY--TEDGAKAGGLYSLIALWRSAESISEKHHV-AAAYKRSLDRVPEGE 1218 +A VPAGA+TL +SY +R ++ + A + P AP +VGMGGGGKT+L SAVVR + VREHF G+FW++ G++AK +L +LL+GL E++A + V LESLE VK+ L S RLVVLDDVWEREV+DAL GL++LVTTRDR+VV V GG +E+GDM E EALE+L +G LP V A+ G +W L + +A ++ + ++V VL SF A+A +Q+ + + VLA G LAP +ML++LW E + R A+ LV + +LQAVGG+ YRVHDLVL F+K ++A + + AT+ +Y G++ VL Y E GA GL+ L ALWRS E +S + A+Y+ SL + E Sbjct: 1 MAAVPAGALTLPQSYVERAAVQEVA-DGLIKPEEPRAPYAVVGMGGGGKTMLVSAVVRKSNVREHFRGGVFWMRVGRHAKNSLLSLLQGLAREMSAAPTDTPHGVPHVLESLEQVKQHLATVASAGTSPRLVVLDDVWEREVVDALLSLGLKVLVTTRDRSVVGVSGGLLELGDMTEEEALELLLKTSRTVGQPGHEVRTQMTKVVVLCGHLPLVLAIAGSMSVVKGKGLTAVAWEELIKEFENVAKKMRVRGEQSSSIKV--VLGTSFDALA--ARKQEESLKMTVLAAGALAPIEMLRNLWEIEDAEGTREEAEGLVSKCLLQAVGGSGYRVHDLVLEFVKTSIRAEEEMVEKATALQAQYLGRVDVLKSYGDPEHGAGNQGLFFLDALWRSVEKLSGDPELEVASYRASLGELESCE 415
BLAST of mRNA_H-paniculata_contig11978.1253.1 vs. uniprot
Match: D7G720_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G720_ECTSI) HSP 1 Score: 254 bits (649), Expect = 2.830e-71 Identity = 183/446 (41.03%), Postives = 253/446 (56.73%), Query Frame = 1 Query: 1 MLEGVENIQSILE---SIRPPSLRKLADVPAGAVTL-GKSYAKRISLLDSAISHVTNPALVDAPCVLVGMGGGGKTVLASAVVRDTGVREHFCAGIFWLKAGQNAKENLHALLRGLVLELAARDGE----VSPQLESLEDVKRLLTEFGGKARSLRLVVLDDVWEREVMDALQHTGLQLLVTTRDRTVVSVPGGSVEVGDMDENEALEVLRVGCGAIGTV----------------ELPRVEALQGPPQHPN-------SWRILHDAL---AARLGTHRPMTVGVRVKAVLEASFGAMADDPDRQKRCVFLAVLAPGTLAPPDMLQDLWN-EASGAARAFAKQLVDQSMLQAVGGA-YRVHDLVLRFLKPKLKANPDRLV-ATSRVVEYCGQLGVLHGY--TEDGAKAGGLYSLIALWRSAESISEKHHV-AAAYKRSLDRVPEGE 1218 +++G+E+ QS L S+ PPSL +A VPAGA+ L SY +R ++ + A +T P AP +VGMGGGGK+VLASAVVR VREHF GIFW++ G+ AK +L ALL+GL ++ A + V L+SLE V++ L S RLVVLDDVWEREV+DA G ++L+TTRDR+VV VP G +E+GD+ E EALE+LR GA+G LP V A+ G +W L L A ++ + ++V VLE SF ++A +Q+ + +AVLA G LAP +ML++LW E + R A+ LV + +L AVGG YRVHDLVL F K ++A + + AT+ +Y G+L VL Y E G GL+ L ALWRS E +S + A+Y+ SL+ + E Sbjct: 217 LVDGLEHHQSFLAALPSLLPPSLPDMAAVPAGALELPSSSYVERAAVQEVA-DGLTAPEESRAPYTVVGMGGGGKSVLASAVVRKPSVREHFRGGIFWVRVGRGAKSSLLALLQGLARDVGAAPTDAPCGVPRVLDSLEQVRQHLAAVTSTGTSQRLVVLDDVWEREVVDAFVPLGFKVLLTTRDRSVVGVPAGRLELGDVTEEEALELLRKTSGAVGQPGDDVRTKMTKVVALCGHLPLVLAIAGSMSVVRGKGLTAVAWEELAKELENVAKKMRARGEQSSSMKV--VLETSFDSLA--VRKQEEFLKMAVLAAGALAPIEMLRNLWEIEDAEGTRDDAEGLVSKCLLHAVGGGGYRVHDLVLEFAKTSIRAEEETVKKATALQAQYLGRLDVLESYGDPEHGTGDQGLFFLDALWRSVEKLSGDPGLEVASYRASLEELESCE 657
BLAST of mRNA_H-paniculata_contig11978.1253.1 vs. uniprot
Match: D7G722_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G722_ECTSI) HSP 1 Score: 252 bits (644), Expect = 1.050e-70 Identity = 181/446 (40.58%), Postives = 249/446 (55.83%), Query Frame = 1 Query: 1 MLEGVENIQSILE---SIRPPSLRKLADVPAGAVTL-GKSYAKRISLLDSAISHVTNPALVDAPCVLVGMGGGGKTVLASAVVRDTGVREHFCAGIFWLKAGQNAKENLHALLRGLVLELAARDGE----VSPQLESLEDVKRLLTEFGGKARSLRLVVLDDVWEREVMDALQHTGLQLLVTTRDRTVVSVPGGSVEVGDMDENEALEVLRVGCGAIGTV----------------ELPRVEALQGPPQHPN-------SWRILHDAL---AARLGTHRPMTVGVRVKAVLEASFGAMADDPDRQKRCVFLAVLAPGTLAPPDMLQDLWN-EASGAARAFAKQLVDQSMLQAVGGA-YRVHDLVLRFLKPKLKANPDRLV-ATSRVVEYCGQLGVLHGY--TEDGAKAGGLYSLIALWRSAESISEKHHV-AAAYKRSLDRVPEGE 1218 +++G+E+ QS L S+ PPSL +A VP GA+ L SY +R ++ + A +T P AP +VGMGGGGK+VLASA VR VREHF GIFW++ G+ AK +L ALL+GL ++ A + V L+ LE V++ L S RLVVLDDVWEREV+DA G ++L+TTRDR+VV +P G +E+GDM E EALE+LR G +G LP V A+ G +W L L A ++ + ++V VLE SF ++A +Q+ + +AVLA G LAP +ML++LW E + R A+ LV + +L AVGG YRVHDLVL F K ++A + + AT+ +Y G+L VL GY E GA GL+ L ALWRS E +S + A+Y SL + E Sbjct: 234 LVDGLEHHQSFLAALPSLLPPSLPDMAAVPTGALELPSSSYVERAAVQEVA-DGLTTPEESRAPYTVVGMGGGGKSVLASAAVRKPSVREHFRGGIFWVRVGRGAKSSLLALLQGLAWDVGAAPTDAPHGVPHVLDRLEQVQQHLAAVASTGTSPRLVVLDDVWEREVVDAFVPLGFKVLLTTRDRSVVGLPAGRLELGDMTEEEALELLRKTSGTVGQPGDDVRTKMTKVVALCGHLPLVLAIAGSMSVVRGKGLTAVAWEELAKELENVAKKMRARGEQSSSMKV--VLETSFDSLA--VRKQEEFLKMAVLAAGALAPIEMLRNLWEVEDAEGTRDDAEGLVSKCLLHAVGGGGYRVHDLVLEFAKTSIRAEEETVKKATALQAQYLGRLDVLEGYGDPEHGAGGQGLFFLDALWRSVEKLSGDPELEVASYHNSLGELESCE 674
BLAST of mRNA_H-paniculata_contig11978.1253.1 vs. uniprot
Match: A0A6H5KF10_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF10_9PHAE) HSP 1 Score: 241 bits (614), Expect = 1.490e-69 Identity = 128/224 (57.14%), Postives = 164/224 (73.21%), Query Frame = 1 Query: 1 MLEGVENIQSILES---IRPPSLRKLADVPAGAVTLGKSYAKRISLLDSAISHVTNPALVDAPCVLVGMGGGGKTVLASAVVRDTGVREHFCAGIFWLKAGQNAKENLHALLRGLVLELAARDGEVSPQLESLEDVKRLLTEFGGKARSLRLVVLDDVWEREVMDALQHTGLQLLVTTRDRTVVSVPGGSVEVGDMDENEALEVLRVGCGAIGTVELPRVEALQ 663 +++G+E+ Q +L +RPP+L +A VP GA++L ++ R +L+ AI ++TN A DAPCVL GM GGGK+VLASAVVRD VREHF AGIFW + G+ +K+ LH L GLVL +A+ G P L S+E+V L F A S RLVVLDDVWE EV++ALQ T LQLLVTTRDR+VVS+PG +EVGDM+E+EALEVLRVGCGA +ELPR++ALQ Sbjct: 380 LVDGLEHHQLLLAMHGHLRPPTLPDMAAVPRGAISLTDAHVSRPLMLERAIDYLTNTARGDAPCVLTGMAGGGKSVLASAVVRDEKVREHFSAGIFWWRVGRISKDRLHEWLEGLVLRVASASGTTPPMLGSVEEVTFYLKAFCADAESQRLVVLDDVWEPEVVNALQVTELQLLVTTRDRSVVSMPGECIEVGDMEEDEALEVLRVGCGAPKNLELPRLQALQ 603
BLAST of mRNA_H-paniculata_contig11978.1253.1 vs. uniprot
Match: A0A6H5JLW6_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLW6_9PHAE) HSP 1 Score: 238 bits (608), Expect = 3.840e-69 Identity = 153/336 (45.54%), Postives = 203/336 (60.42%), Query Frame = 1 Query: 196 MGGGGKTVLASAVVRDTGVREHFCAGIFWLKAGQNAKENLHALLRGLVLELAARDGEV---SP-QLESLEDVKRLLTEFGGKARSLRLVVLDDVWEREVMDALQHTGLQLLVTTRDRTVVSVPGGSVEVGDMDENEALEVLRVGCGAIGT--VELPRVEALQGP-------PQHPNSWRILHDALAARLGTHRPMTVGVRVKAVLEASFGAMADDPDRQKRCVFLAVLAPGTLAPPDMLQDLWNEASGAARAFAKQLVDQSMLQAVGGAYRVHDLVLRFLKPKLKA-NPDRLV-ATSRVVEYCGQLGVLHGYTEDGAKAGGLYSLIALWRSAESIS 1158 MGGGG+TVL SAVVR+ V E+F GIF + G+ AK L LL+GL E+ A +P L+SLE V + LT S RLVVLDDV EREV++AL GL+L+VTTRDR+VV VPGG +EVGDM E EALE+L + GA+ + +LP A+ G P P++W LH+ L+A+ + + VLE SF A+ D D ++R L VLA G LAP +ML LW++ G + F QLVD+S++QAV YR+HDLVL F+K KL +R+V TSR+ +Y +L VL Y E GGL++L+ LW S E +S Sbjct: 1 MGGGGETVLVSAVVRELSVLEYFRGGIFLMSVGRGAKNRLLPLLQGLAREMGAAPAHAPHGNPGDLDSLEHVMQHLTTVVSTGTSPRLVVLDDVLEREVVEALLPLGLKLVVTTRDRSVVGVPGGCLEVGDMTEEEALELLMLASGAVSSRIADLPLAMAVIGAMDESRESPHRPDTWTKLHEKLSAKPEFVYEEGLDNGLGNVLELSFSAL--DADAKERFRRLGVLAGGALAPMEMLSYLWDQGPGNSLLFVGQLVDKSLVQAVEHKYRLHDLVLAFVKSKLCCLKMERVVLVTSRLAQYLSRLSVLQEYAEADEMQGGLFALMGLWGSVEELS 334
BLAST of mRNA_H-paniculata_contig11978.1253.1 vs. uniprot
Match: D7FUD7_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUD7_ECTSI) HSP 1 Score: 243 bits (620), Expect = 1.950e-67 Identity = 174/439 (39.64%), Postives = 243/439 (55.35%), Query Frame = 1 Query: 31 ILESIRPPSLRKLADVPAGAVTLG-KSYAKRISLLDSAISHVTNPALVDAPCVLVGMGGGGKTVLASAVVRDTGVREHFCAGIFWLKAGQNAKENLHALLRGLVLELAARDGE----VSPQLESLEDVKRLLTEFGGKARSLRLVVLDDVWEREVMDALQHTGLQLLVTTRDRTVVSVPGGSVEVGDMDENEALEVLRVGCGAIGTVE---------------LPRVEALQGPPQHPN-------SWRIL---HDALAARLGTHRPMTVGVRVKAVLEASFGAMADDPDRQKRCVFLAVLAPGTLAPPDMLQDLWN-EASGAARAFAKQLVDQSMLQAVGGA-YRVHDLVLRFLKPKLKANPDRLV-ATSRVVEYCGQLGVLHGY--TEDGAKAGGLYSLIALWRSAESISEKHHV-AAAYKRSLDRVPEGEPWLQASR 1239 I I PPSL +A+VP GA+ L SY +R ++ + A +TNP P +VG+GGGGK+VLASAVVR VREHF GI W++ G+ AK +L LL+GL E+ A + V L+SLE V++ L S RLVVLDDVWEREV+DA G +LL+TTRDR++V P G +E+GDM E EALE+LR G + + LP V A+ G +W L + +A ++ + ++V VLE +F ++A +QK + +AVLA G LAP +ML +LW E + A A+ LV + +L AVGG YR+HDLVL F K ++A + + AT+ +Y G+L V+ Y E GA G++ L ALWRS E +S + A+Y+ SL + GE A+R Sbjct: 32 IFTDILPPSLPDMAEVPVGALELPHSSYVERAAVQEVA-DGLTNPEEPRTPYTVVGIGGGGKSVLASAVVRMPSVREHFRGGISWVRVGRGAKNSLLPLLQGLAREVGAAPTDAPHGVPHALDSLEQVQQHLAAVASTRNSPRLVVLDDVWEREVVDAFVPLGFKLLLTTRDRSIVCDPAGRLELGDMTEEEALELLRKTSGTVDPGDDVRMKMTKVVALCGHLPLVLAIAGSMSAVKGKGLTAVAWEELAKEFENVAKKMRARGQQSSSIKV--VLETTFDSLATR--KQKEFLMMAVLAAGALAPIEMLSNLWEIEDAEGTHAEAEGLVSKYLLHAVGGGGYRMHDLVLDFAKTSIRAEEETVKRATALQAQYLGRLDVVESYGDPEHGAGDQGIFFLDALWRSVEKLSGDPQLEVASYRASLGALEWGEATEAAAR 465
BLAST of mRNA_H-paniculata_contig11978.1253.1 vs. uniprot
Match: A0A6H5KXS7_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXS7_9PHAE) HSP 1 Score: 232 bits (592), Expect = 9.980e-66 Identity = 177/454 (38.99%), Postives = 242/454 (53.30%), Query Frame = 1 Query: 1 MLEGVENIQSILE---SIRPPSLRKLADVPAGAVTLG-KSYAKRISLLDSAISHVTNPALVDAPCVLVGMGGGGKTVLASAVVRDTGVREHFCAGIFWLKAGQNAKENLHALLRGLVLELAARDGE----VSPQLESLEDVKRLLTEFGGKARSLRLVVLDDVWEREVMDALQHTGLQLLVTTRDRTVVSVPGGSVEVGDMDENEALEVLRVGCGAIGTV----------------ELPRVEALQGPPQHPN-------SWRILHDAL---AARLGTHRPMTVGVRVKAVLEASFGAMADDPDRQKRCVFLAVLAPG-----------------------------TLAPPDMLQDLWN-EASGAARAFAKQLVDQSMLQAVGGA-YRVHDLVLRFLKPKLKANPDRL-VATSRVVEYCGQLGVLHGYT--EDGAKAGGLYSLIALWRSAESIS 1158 +++G+E+ QS L S+ PPSL +A VPAGA+ L SY +R ++ + A +T+P AP +VGMGGGGK+VLASAVVR VREHF GIFW++ G+ AK +L ALL+GL E+ A + V L+ LE VK+ L RLVVLDDVWEREV+DA G ++L+TTRDR+VV VP G +EVGDM E EALE+LR GA+G LP V A+ G +W+ L + L A ++ + + AVLE SF ++A +Q+ + LAVLA LAP +ML++LW E + R A+ LV + +L AVGG YRVHDLVL + K +++A+ + + T+ + G+L VL Y E GA L+ L ALWRS E +S Sbjct: 180 LVDGLEHHQSFLAALPSLLPPSLPDMAAVPAGALELPCSSYVERAAVQEVA-DGLTSPEDPRAPYTVVGMGGGGKSVLASAVVRKPSVREHFRGGIFWVRVGRGAKSSLLALLQGLAREMGAARTDAPHTVPHVLDGLEQVKQHLAAVASTGTFPRLVVLDDVWEREVVDAFVPLGFKVLLTTRDRSVVVVPAGRLEVGDMTEEEALELLRKSSGAVGQPGDDVRTKMTKVVALCGHLPLVLAIAGSMSVVKGKGLTAVAWKELAENLENVAKKMRARGEQSSSIN--AVLETSFDSLA--VRKQEEFLKLAVLAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALAPIEMLRNLWEIEDAEGTRDEAEGLVSKCLLHAVGGGGYRVHDLVLEYAKTRIRADAEMVRKVTALQAHFLGRLDVLKSYRDPEHGAGNQSLFFLDALWRSVEKLS 628
BLAST of mRNA_H-paniculata_contig11978.1253.1 vs. uniprot
Match: A0A6H5KU94_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KU94_9PHAE) HSP 1 Score: 236 bits (603), Expect = 2.150e-65 Identity = 176/430 (40.93%), Postives = 235/430 (54.65%), Query Frame = 1 Query: 4 LEGVE-NIQSILESIR---------PPSLRKLADVPAGAVTLGKSYAKRISLLDSAISHVTNPALVDAPCVLVGMGGGGKTVLASAVVRDTGVREHFCAGIFWLKAGQNAKENLHALLRGLVLELAARDGE----VSPQLESLEDVKRLLTEFGGKARSLRLVVLDDVWEREVMDALQHTGLQLLVTTRDRTVVSVPGGSVEVGDMDENEALEVLRVGCGAIG-------TV---------ELPRVEAL-------QGPPQHPNSWRILHDALAARLGT-HRPMTVGVRVKAVLEASFGAMADDPDRQKRCVF--LAVLAPGTLAPPDMLQDLWN-EASGAARAFAKQLVDQSMLQAVGGA-YRVHDLVLRFLKPKLKANPDRLVATSRV-VEYCGQLGVLHGYT--EDGAKAGGLYSLIALWRSAESIS 1158 L+G++ +++ +L++I PPSL +A VPA AV L S + + +TNP AP + GMGGGGK+VLASAVVR + VREHF GIFWL G+ AK+ L LL+GL ++ A + V L+SLE V+R L S RLVVLDDVWEREV+DAL G ++LVTTRDR+VV VP +E+GDM E EALE+L G +G TV LP V A+ +G +W L D L + + + VLE SF A+ +K+ F AVLAPG +A +ML +LW E +G R A+ LV + +LQ VGG YRVHDLVL F+K K+KA+ + + + ++ G+L VL Y E GA GL+ L ALWRS E +S Sbjct: 105 LQGIDGDVRRVLDAISAKGATGTVLPPSLPDMAKVPAEAVALSDSLYVERAAVRKVADGITNPEEPRAPYTVFGMGGGGKSVLASAVVRKSSVREHFRGGIFWLTVGRGAKKRLLPLLQGLTGDMGAAPTDTPHGVPHVLDSLEQVQRHLGAVASTGTSPRLVVLDDVWEREVVDALLPLGFKVLVTTRDRSVVGVPTRCLELGDMTEEEALELLLKTSGTVGRPGDSVRTVMTKVVTLCGRLPLVLAIAGSLPVVKGKGLTAGAWGKLIDELENVVTKMEASLEDSNSLNVVLETSFDALTF----RKKQAFKKTAVLAPGAVASTEMLLNLWETEDTGGTREDAEGLVSKCLLQDVGGGGYRVHDLVLDFVKIKIKADMEMAKKIAALQAQFLGRLNVLKSYEHPEHGAGNQGLFVLDALWRSVEQLS 530 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig11978.1253.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig11978.1253.1 >prot_H-paniculata_contig11978.1253.1 ID=prot_H-paniculata_contig11978.1253.1|Name=mRNA_H-paniculata_contig11978.1253.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=428bp MLEGVENIQSILESIRPPSLRKLADVPAGAVTLGKSYAKRISLLDSAISHback to top mRNA from alignment at H-paniculata_contig11978:1192..3437- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig11978.1253.1 ID=mRNA_H-paniculata_contig11978.1253.1|Name=mRNA_H-paniculata_contig11978.1253.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2246bp|location=Sequence derived from alignment at H-paniculata_contig11978:1192..3437- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig11978:1192..3437- >mRNA_H-paniculata_contig11978.1253.1 ID=mRNA_H-paniculata_contig11978.1253.1|Name=mRNA_H-paniculata_contig11978.1253.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2568bp|location=Sequence derived from alignment at H-paniculata_contig11978:1192..3437- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |