mRNA_H-paniculata_contig51867.12525.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig51867.12525.1
Unique NamemRNA_H-paniculata_contig51867.12525.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig51867.12525.1 vs. uniprot
Match: D1J713_ECTSI (Replicative DNA helicase n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D1J713_ECTSI)

HSP 1 Score: 800 bits (2067), Expect = 1.740e-289
Identity = 415/416 (99.76%), Postives = 415/416 (99.76%), Query Frame = 1
Query:    1 LSENKSKQHLISVEEGLQQIVKEIEEGLRIPRLPGLKTTFIEFDIITQGFQNSDLIIIAGRPSMGKTAFAFNLAKNIAQNHNTGVVFFSLEMTREQLLYRLLASEVEITNTRLRASSIKETEWLKINTKVSELSKLKLFIDDTPNLSVGEIKLKIKTIDLESSKYVSLIVIDYLQLLEGVDQNTNRVQELSKITRALKKLARDLNLPIIVLSQLSRNVESRVNKRPILADLRESGCINFLPEKYLTKIKGGKNFIFCWTGNSLKKQKILNLKLTGQKPIYKLESNLGLILLITSNHKILTNKGWKKIDQLVKNNFIGAKLLIGFKSLADFGKSSITWEKINKIKYFQLAPVYDLHISNYSNYLTNHLVIHNSIEQDADVVIMLYRDDYYNKETSKKNIIEIIIAKHRNGPIGSTTL 1248
            LSENKSKQHLISVEEGLQQIVKEIEEGLRIPRLPGLKTTFIEFDIITQGFQNSDLIIIAGRPSMGKTAFAFNLAKNIAQNHNTGVVFFSLEMTREQLLYRLLASEVEITNTRLRASSIKETEWLKINTKVSELSKLKLFIDDTPNLSVGEIKLKIKTIDLESSKYVSLIVIDYLQLLEGVDQNTNRVQELSKITRALKKLARDLNLPIIVLSQLSRNVESRVNKRPILADLRESGCINFLPEKYLTKIKGGKNFIFCWTGNSLKKQKILNLKLTGQKPIYKLESNLGLILLITSNHKILTNKGWKKIDQLVKNNFIGAKLLIGFKSLADFGKSSITWEKINKIKYFQLAPVYDLHISNYSNYL NHLVIHNSIEQDADVVIMLYRDDYYNKETSKKNIIEIIIAKHRNGPIGSTTL
Sbjct:  153 LSENKSKQHLISVEEGLQQIVKEIEEGLRIPRLPGLKTTFIEFDIITQGFQNSDLIIIAGRPSMGKTAFAFNLAKNIAQNHNTGVVFFSLEMTREQLLYRLLASEVEITNTRLRASSIKETEWLKINTKVSELSKLKLFIDDTPNLSVGEIKLKIKTIDLESSKYVSLIVIDYLQLLEGVDQNTNRVQELSKITRALKKLARDLNLPIIVLSQLSRNVESRVNKRPILADLRESGCINFLPEKYLTKIKGGKNFIFCWTGNSLKKQKILNLKLTGQKPIYKLESNLGLILLITSNHKILTNKGWKKIDQLVKNNFIGAKLLIGFKSLADFGKSSITWEKINKIKYFQLAPVYDLHISNYSNYLNNHLVIHNSIEQDADVVIMLYRDDYYNKETSKKNIIEIIIAKHRNGPIGSTTL 568          
BLAST of mRNA_H-paniculata_contig51867.12525.1 vs. uniprot
Match: A0A1I9LVP9_9PHAE (Replicative DNA helicase n=1 Tax=Pleurocladia lacustris TaxID=246121 RepID=A0A1I9LVP9_9PHAE)

HSP 1 Score: 706 bits (1823), Expect = 1.680e-252
Identity = 362/416 (87.02%), Postives = 389/416 (93.51%), Query Frame = 1
Query:    1 LSENKSKQHLISVEEGLQQIVKEIEEGLRIPRLPGLKTTFIEFDIITQGFQNSDLIIIAGRPSMGKTAFAFNLAKNIAQNHNTGVVFFSLEMTREQLLYRLLASEVEITNTRLRASSIKETEWLKINTKVSELSKLKLFIDDTPNLSVGEIKLKIKTIDLESSKYVSLIVIDYLQLLEGVDQNTNRVQELSKITRALKKLARDLNLPIIVLSQLSRNVESRVNKRPILADLRESGCINFLPEKYLTKIKGGKNFIFCWTGNSLKKQKILNLKLTGQKPIYKLESNLGLILLITSNHKILTNKGWKKIDQLVKNNFIGAKLLIGFKSLADFGKSSITWEKINKIKYFQLAPVYDLHISNYSNYLTNHLVIHNSIEQDADVVIMLYRDDYYNKETSKKNIIEIIIAKHRNGPIGSTTL 1248
            LSENKS+QHLISVE+GLQQI+KEIEEGL++ RLPGLKT F+EFDIITQGFQNSDLIIIAGRPSMGKTAFAFNLAKN+AQ HNTGVVFFSLEMTR+QLLYRLLASEVEITNTRLRAS IKETEWLKIN+ + +LSKLKLFIDDTP+LSVGEIKLKIKTIDLESS+ +SLIVIDYLQLLEGVDQN NRVQELSKITRALKKLARDLNLPIIVLSQLSRNVESRVNKRPILADLRESGCI+F P KY TKIKG K+FIFCWTGN L KQKILN+KLTGQKPIYKLESNLG  +LITSNHKILTNKGW+KIDQLVKNNFI AKL+IG +SL + GK SITWEKI+KI Y ++A VYDLHISNYSNYL NHLVIHNSIEQDADVVIMLYR+DYYNKET  KNIIE+IIAKHRNGPIGSTTL
Sbjct:  148 LSENKSRQHLISVEQGLQQILKEIEEGLKVSRLPGLKTNFLEFDIITQGFQNSDLIIIAGRPSMGKTAFAFNLAKNVAQYHNTGVVFFSLEMTRQQLLYRLLASEVEITNTRLRASRIKETEWLKINSTIGDLSKLKLFIDDTPDLSVGEIKLKIKTIDLESSQQISLIVIDYLQLLEGVDQNANRVQELSKITRALKKLARDLNLPIIVLSQLSRNVESRVNKRPILADLRESGCISFFPTKYRTKIKGEKDFIFCWTGNFLDKQKILNIKLTGQKPIYKLESNLGRSILITSNHKILTNKGWQKIDQLVKNNFISAKLVIGVRSLKNCGKYSITWEKISKISYSEIASVYDLHISNYSNYLVNHLVIHNSIEQDADVVIMLYREDYYNKETLDKNIIELIIAKHRNGPIGSTTL 563          
BLAST of mRNA_H-paniculata_contig51867.12525.1 vs. uniprot
Match: A0A344PF29_9PHAE (Replicative DNA helicase n=4 Tax=Scytosiphonaceae TaxID=2891 RepID=A0A344PF29_9PHAE)

HSP 1 Score: 688 bits (1775), Expect = 4.130e-245
Identity = 352/417 (84.41%), Postives = 382/417 (91.61%), Query Frame = 1
Query:    1 LSENKSKQHLISVEEGLQQIVKEIEEGLRIPRLPGLKTTFIEFDIITQGFQNSDLIIIAGRPSMGKTAFAFNLAKNIAQNHNTGVVFFSLEMTREQLLYRLLASEVEITNTRLRASSIKETEWLKINTKVSELSKLKLFIDDTPNLSVGEIKLKIKTIDLESSKYVSLIVIDYLQLLEGVDQNTNRVQELSKITRALKKLARDLNLPIIVLSQLSRNVESRVNKRPILADLRESGCINFLPEKYLTKIKGGK-NFIFCWTGNSLKKQKILNLKLTGQKPIYKLESNLGLILLITSNHKILTNKGWKKIDQLVKNNFIGAKLLIGFKSLADFGKSSITWEKINKIKYFQLAPVYDLHISNYSNYLTNHLVIHNSIEQDADVVIMLYRDDYYNKETSKKNIIEIIIAKHRNGPIGSTTL 1248
            LSENKS+QHLISVE+GLQQI+KEIEEGLR+PRLPGLKTTFIEFDIITQGFQ SDLIIIAGRPSMGKTAFAFNLAKNIAQNHNTGVVFFSLEMTR+QLLYRLLASEVEITNTRLRAS IKETEW KIN  + +LS LKLFIDDTP+LSVGEIKLKIKTIDLESSK+V LIVIDYLQLLEG +QN+NRVQELSKITR LKKLARDLNLPIIVLSQLSRNVESRVNK+PILADLRESGCI F   +Y+ KIK  K NFIFCWTGN + KQKILN+KLTGQKP+YKLESNLG  LL+TSNHKILTNKGWKK DQL++NNFI AKLL+G KSL +    SITWEK+NKI Y +LAPVYDLHISNYSNYLTNHLVIHNSIEQDAD+VIMLYR+DYY KE ++KNIIE+I+AKHRNGPIGST L
Sbjct:  153 LSENKSRQHLISVEQGLQQILKEIEEGLRVPRLPGLKTTFIEFDIITQGFQKSDLIIIAGRPSMGKTAFAFNLAKNIAQNHNTGVVFFSLEMTRQQLLYRLLASEVEITNTRLRASRIKETEWFKINATIQDLSNLKLFIDDTPDLSVGEIKLKIKTIDLESSKHVGLIVIDYLQLLEGAEQNSNRVQELSKITRDLKKLARDLNLPIIVLSQLSRNVESRVNKKPILADLRESGCIKFSSSRYVKKIKDKKENFIFCWTGNFVVKQKILNIKLTGQKPVYKLESNLGWGLLLTSNHKILTNKGWKKTDQLIQNNFISAKLLLGIKSLNNSNTYSITWEKVNKISYSELAPVYDLHISNYSNYLTNHLVIHNSIEQDADIVIMLYREDYYKKEIAEKNIIELIVAKHRNGPIGSTKL 569          
BLAST of mRNA_H-paniculata_contig51867.12525.1 vs. uniprot
Match: A0A6B7EUP7_9PHAE (Replicative DNA helicase n=1 Tax=Cladosiphon okamuranus TaxID=309737 RepID=A0A6B7EUP7_9PHAE)

HSP 1 Score: 674 bits (1738), Expect = 1.740e-239
Identity = 344/416 (82.69%), Postives = 379/416 (91.11%), Query Frame = 1
Query:    1 LSENKSKQHLISVEEGLQQIVKEIEEGLRIPRLPGLKTTFIEFDIITQGFQNSDLIIIAGRPSMGKTAFAFNLAKNIAQNHNTGVVFFSLEMTREQLLYRLLASEVEITNTRLRASSIKETEWLKINTKVSELSKLKLFIDDTPNLSVGEIKLKIKTIDLESSKYVSLIVIDYLQLLEGVDQNTNRVQELSKITRALKKLARDLNLPIIVLSQLSRNVESRVNKRPILADLRESGCINFLPEKYLTKIKGGKNFIFCWTGNSLKKQKILNLKLTGQKPIYKLESNLGLILLITSNHKILTNKGWKKIDQLVKNNFIGAKLLIGFKSLADFGKSSITWEKINKIKYFQLAPVYDLHISNYSNYLTNHLVIHNSIEQDADVVIMLYRDDYYNKETSKKNIIEIIIAKHRNGPIGSTTL 1248
            LSENKS+QHLISV +GLQQI+KEIEEGLR+PRLPGLKTTF EFDIITQGFQNSDLIIIAGRPSMGKTAFAFNLAKNIAQ+HNTGVVFFSLEMTR+QLLYRLLASEV+ITNTRLRAS IKETEW+KIN+ V +LS L+LFIDDTP+LSVGEIKLKIK+IDLESS  ++LIVIDYLQLLEG DQ +NR QELSKITRALKKLARDLN+PIIVLSQLSRNVESRVNKRPILADLRESGCI F   KY+TKIK  K+ IFCWTG  + KQK+L +KLTGQKPIYKLESNL   LLITSNHKILTNKGW+KIDQL++NNFI AKLLIG KSL  F K  I+WEK+NKI Y+QLAPVYD+ +SNYSNYL+NHL+IHNSIEQDADVVIMLYR+DYYNKET  KN+IE+IIAKHRNGPIGST L
Sbjct:  153 LSENKSRQHLISVNDGLQQIIKEIEEGLRVPRLPGLKTTFTEFDIITQGFQNSDLIIIAGRPSMGKTAFAFNLAKNIAQHHNTGVVFFSLEMTRQQLLYRLLASEVQITNTRLRASRIKETEWIKINSTVRDLSNLRLFIDDTPDLSVGEIKLKIKSIDLESSNPINLIVIDYLQLLEGADQPSNRAQELSKITRALKKLARDLNIPIIVLSQLSRNVESRVNKRPILADLRESGCIKFSLAKYITKIKKKKS-IFCWTGKFVAKQKLLTIKLTGQKPIYKLESNLAWSLLITSNHKILTNKGWRKIDQLIRNNFISAKLLIGIKSLNSFNKYVISWEKVNKISYYQLAPVYDIQVSNYSNYLSNHLIIHNSIEQDADVVIMLYREDYYNKETIDKNLIELIIAKHRNGPIGSTKL 567          
BLAST of mRNA_H-paniculata_contig51867.12525.1 vs. uniprot
Match: A0A8F0JYE4_9PHAE (Replicative DNA helicase n=2 Tax=Laminariales TaxID=2886 RepID=A0A8F0JYE4_9PHAE)

HSP 1 Score: 674 bits (1738), Expect = 1.810e-239
Identity = 345/418 (82.54%), Postives = 382/418 (91.39%), Query Frame = 1
Query:    1 LSENKSKQHLISVEEGLQQIVKEIEEGLRIPRLPGLKTTFIEFDIITQGFQNSDLIIIAGRPSMGKTAFAFNLAKNIAQNHNTGVVFFSLEMTREQLLYRLLASEVEITNTRLRASSIKETEWLKINTKVSELSKLKLFIDDTPNLSVGEIKLKIKTIDLESSKYVSLIVIDYLQLLEGVDQNTNRVQELSKITRALKKLARDLNLPIIVLSQLSRNVESRVNKRPILADLRESGCINFLPEKYL-TKIKGGKN-FIFCWTGNSLKKQKILNLKLTGQKPIYKLESNLGLILLITSNHKILTNKGWKKIDQLVKNNFIGAKLLIGFKSLADFGKSSITWEKINKIKYFQLAPVYDLHISNYSNYLTNHLVIHNSIEQDADVVIMLYRDDYYNKETSKKNIIEIIIAKHRNGPIGSTTL 1248
            LSE KSK+HLISVE+GLQQI+KEIEEGLR  RLPGLKTTFIEFDIITQGFQNSDLIIIAGRPSMGKTAFAFNLAKN+AQNHN GVVFFSLEMTR+QLLYRLLASEVEITNTRLRAS +KETEW+KIN  + +LSKL+LFIDDTP+LSVGEIKLKIKTI+LE S  +SLIVIDYLQLLEGV+QN NRVQELSKITRALKKLARDLN+PIIVLSQLSRNVESRVNKRPILADLRESGCINFL +K   TKI   +N  +FCWTG  + KQKI N+K TGQKP+YKLES+LG  LLITSNHKILTNKGWKKIDQLV ++FI AKLL+GFKSL + GK SITW+K+NKI Y++L PVYDLHISNYSNYLTNHL+IHNSIEQDADVV+MLYRDDYYNK+T++KN+IE+IIAKHRNGPIGST L
Sbjct:  153 LSETKSKRHLISVEQGLQQILKEIEEGLRTTRLPGLKTTFIEFDIITQGFQNSDLIIIAGRPSMGKTAFAFNLAKNVAQNHNAGVVFFSLEMTRQQLLYRLLASEVEITNTRLRASRVKETEWIKINNTIHDLSKLQLFIDDTPDLSVGEIKLKIKTINLECSNQISLIVIDYLQLLEGVNQNENRVQELSKITRALKKLARDLNIPIIVLSQLSRNVESRVNKRPILADLRESGCINFLFKKQSDTKITETRNNSVFCWTGTFISKQKIFNIKFTGQKPVYKLESSLGWSLLITSNHKILTNKGWKKIDQLVLSDFISAKLLVGFKSLNNLGKYSITWDKVNKISYYELVPVYDLHISNYSNYLTNHLIIHNSIEQDADVVVMLYRDDYYNKDTTEKNLIELIIAKHRNGPIGSTKL 570          
BLAST of mRNA_H-paniculata_contig51867.12525.1 vs. uniprot
Match: A0A8F0F9P7_9PHAE (Replicative DNA helicase n=1 Tax=Chorda asiatica TaxID=1281577 RepID=A0A8F0F9P7_9PHAE)

HSP 1 Score: 661 bits (1706), Expect = 1.270e-234
Identity = 339/417 (81.29%), Postives = 379/417 (90.89%), Query Frame = 1
Query:    1 LSENKSKQHLISVEEGLQQIVKEIEEGLRIPRLPGLKTTFIEFDIITQGFQNSDLIIIAGRPSMGKTAFAFNLAKNIAQNHNTGVVFFSLEMTREQLLYRLLASEVEITNTRLRASSIKETEWLKINTKVSELSKLKLFIDDTPNLSVGEIKLKIKTIDLESSKYVSLIVIDYLQLLEGVDQNTNRVQELSKITRALKKLARDLNLPIIVLSQLSRNVESRVNKRPILADLRESGCINFLPEKYLTKIKGGKN-FIFCWTGNSLKKQKILNLKLTGQKPIYKLESNLGLILLITSNHKILTNKGWKKIDQLVKNNFIGAKLLIGFKSLADFGKSSITWEKINKIKYFQLAPVYDLHISNYSNYLTNHLVIHNSIEQDADVVIMLYRDDYYNKETSKKNIIEIIIAKHRNGPIGSTTL 1248
            LS+ KS+++L SVE+G+QQI+KE+EEGLRIPRLPGLKTTFIEFDIITQGFQNSDLIIIAGRPSMGKTAFAFNLAKN+AQNH+TGVVFFSLEMTR+QLLYRLLASEVEITNTRLRAS IKETEW+KIN+ +  LSK+KLFIDDTP+LSVGEI+LKIKTI+LESSK +SL+VIDYLQLLEG +Q+TNRVQELS +TRALKKLARDLN+PIIVLSQLSRNVESR+NKRPILADLRESGCINFL +K   KI   KN  IFCWTGN L KQKI ++K TGQKP Y+LESNLG  LL++SNHKILTNKGWKK+DQLV NNFI AKLLIG KSL +  + SITW+K+ KI Y  LAPVYDLHISNYSNYLTNHL+IHNSIEQDADVV+MLYRDDYYNKET +KNIIE+IIAKHRNGPIGST L
Sbjct:  153 LSQTKSRKNLTSVEQGMQQILKEMEEGLRIPRLPGLKTTFIEFDIITQGFQNSDLIIIAGRPSMGKTAFAFNLAKNVAQNHDTGVVFFSLEMTRQQLLYRLLASEVEITNTRLRASRIKETEWIKINSTIRNLSKVKLFIDDTPDLSVGEIRLKIKTINLESSKRISLVVIDYLQLLEGTNQSTNRVQELSILTRALKKLARDLNIPIIVLSQLSRNVESRINKRPILADLRESGCINFLIKKSTMKINKTKNNSIFCWTGNYLSKQKIFDIKFTGQKPTYRLESNLGWSLLLSSNHKILTNKGWKKMDQLVINNFISAKLLIGIKSLDNLNRHSITWDKVIKIIYQNLAPVYDLHISNYSNYLTNHLIIHNSIEQDADVVVMLYRDDYYNKETLEKNIIELIIAKHRNGPIGSTKL 569          
BLAST of mRNA_H-paniculata_contig51867.12525.1 vs. uniprot
Match: A0A140G1D3_UNDPI (Replicative DNA helicase n=30 Tax=Laminariales TaxID=2886 RepID=A0A140G1D3_UNDPI)

HSP 1 Score: 660 bits (1702), Expect = 5.540e-234
Identity = 337/419 (80.43%), Postives = 379/419 (90.45%), Query Frame = 1
Query:    1 LSENKSKQHLISVEEGLQQIVKEIEEGLRIPRLPGLKTTFIEFDIITQGFQNSDLIIIAGRPSMGKTAFAFNLAKNIAQNHNTGVVFFSLEMTREQLLYRLLASEVEITNTRLRASSIKETEWLKINTKVSELSKLKLFIDDTPNLSVGEIKLKIKTIDLESSKYVSLIVIDYLQLLEGVDQNTNRVQELSKITRALKKLARDLNLPIIVLSQLSRNVESRVNKRPILADLRESGCINFLPEK---YLTKIKGGKNFIFCWTGNSLKKQKILNLKLTGQKPIYKLESNLGLILLITSNHKILTNKGWKKIDQLVKNNFIGAKLLIGFKSLADFGKSSITWEKINKIKYFQLAPVYDLHISNYSNYLTNHLVIHNSIEQDADVVIMLYRDDYYNKETSKKNIIEIIIAKHRNGPIGSTTL 1248
            +SE KSK+H+ISV+EGLQQ++KEIEEGLRIP+LPGLKTTF+EFDIITQGFQNSDLIIIAGRPSMGKTAFAFNLAKNIAQNH TGV+FFSLEMTR+QLLYRLLASEV ITNTRLRAS IKETEWLKIN  + +LS+L+LFIDDTP+LSVGEIKLK+KTI+LESS  +SL+VIDYLQLLEGV+Q+ NRVQELSKITRALKKLARDLN+PIIVLSQLSRNVESRVNKRPILADLRESGCI F  +K    + KIK  +N IFCW GN + KQKI N+K TGQKP+YKLE+NLG  LLI+SNHKILTNKGWKKIDQL  NNFI AKLLIGFKSL +  K SITW+K+  I+Y +LAPVYDLHIS+YSNYLTNHL+IHNSIEQDADVVIMLYRD+YYNK+T +KN+IE+IIAKHRNGPIGST L
Sbjct:  155 ISETKSKKHMISVQEGLQQVLKEIEEGLRIPKLPGLKTTFLEFDIITQGFQNSDLIIIAGRPSMGKTAFAFNLAKNIAQNHKTGVIFFSLEMTRQQLLYRLLASEVGITNTRLRASRIKETEWLKINNTIKDLSQLRLFIDDTPDLSVGEIKLKVKTINLESSNQISLVVIDYLQLLEGVNQDGNRVQELSKITRALKKLARDLNIPIIVLSQLSRNVESRVNKRPILADLRESGCITFSIKKSSQQINKIK--ENSIFCWNGNYISKQKIRNVKFTGQKPVYKLETNLGWSLLISSNHKILTNKGWKKIDQLALNNFISAKLLIGFKSLNNLSKYSITWDKVTNIRYHKLAPVYDLHISDYSNYLTNHLIIHNSIEQDADVVIMLYRDEYYNKDTLEKNLIELIIAKHRNGPIGSTKL 571          
BLAST of mRNA_H-paniculata_contig51867.12525.1 vs. uniprot
Match: A0A8F0FB27_9PHAE (Replicative DNA helicase n=1 Tax=Desmarestia aculeata TaxID=62298 RepID=A0A8F0FB27_9PHAE)

HSP 1 Score: 647 bits (1670), Expect = 3.760e-229
Identity = 328/417 (78.66%), Postives = 372/417 (89.21%), Query Frame = 1
Query:    1 LSENKSKQHLISVEEGLQQIVKEIEEGLRIPRLPGLKTTFIEFDIITQGFQNSDLIIIAGRPSMGKTAFAFNLAKNIAQNHNTGVVFFSLEMTREQLLYRLLASEVEITNTRLRASSIKETEWLKINTKVSELSKLKLFIDDTPNLSVGEIKLKIKTIDLESSKYVSLIVIDYLQLLEGVDQNTNRVQELSKITRALKKLARDLNLPIIVLSQLSRNVESRVNKRPILADLRESGCINFLPEKYLTKI-KGGKNFIFCWTGNSLKKQKILNLKLTGQKPIYKLESNLGLILLITSNHKILTNKGWKKIDQLVKNNFIGAKLLIGFKSLADFGKSSITWEKINKIKYFQLAPVYDLHISNYSNYLTNHLVIHNSIEQDADVVIMLYRDDYYNKETSKKNIIEIIIAKHRNGPIGSTTL 1248
            LSE KS ++LISVE+GLQQ++KEIE+GL++P+LPGLKT FIEFDIITQGFQNSDLIIIAGRPSMGKTAFAFNLAKNI QNHNTGVVFFSLEMTR+QLLYRLLASEVEITNTRLR+S IKETEWLKIN  +  LSKLKLFIDDTPNLS+GEIKLKIKTI+LE  K + LI+IDYLQLLEG++QN NRVQELSKITRALK LARDLN+PIIVLSQLSRNVESR+NKRPILADLRESGCINF  +    KI +  KN IFCWTG+ + KQ I N+KLTGQKP+Y+LE+NLG  +LI+S HKILTNKGWKKIDQL+ N+FI AKLL+ FKS  +F K SI+W+KI KI Y +LAPVYDLH+S +SNYLTNHL++HNSIEQDADVVIMLYRD+YYNKET +KNIIEIIIAKHRNGP+GST L
Sbjct:  153 LSETKSTKNLISVEQGLQQVLKEIEKGLKVPQLPGLKTNFIEFDIITQGFQNSDLIIIAGRPSMGKTAFAFNLAKNIVQNHNTGVVFFSLEMTRQQLLYRLLASEVEITNTRLRSSRIKETEWLKINNTIVNLSKLKLFIDDTPNLSIGEIKLKIKTINLEIDKQIGLIIIDYLQLLEGIEQNANRVQELSKITRALKNLARDLNIPIIVLSQLSRNVESRINKRPILADLRESGCINFFFKNNFAKIYQKKKNSIFCWTGDLISKQIIFNIKLTGQKPVYRLETNLGWSILISSGHKILTNKGWKKIDQLIINDFISAKLLLDFKSENNFNKRSISWDKITKISYEKLAPVYDLHVSRFSNYLTNHLILHNSIEQDADVVIMLYRDEYYNKETIEKNIIEIIIAKHRNGPVGSTKL 569          
BLAST of mRNA_H-paniculata_contig51867.12525.1 vs. uniprot
Match: D1GJP3_FUCVE (Replicative DNA helicase n=3 Tax=Fucaceae TaxID=3010 RepID=D1GJP3_FUCVE)

HSP 1 Score: 607 bits (1566), Expect = 2.440e-213
Identity = 312/418 (74.64%), Postives = 359/418 (85.89%), Query Frame = 1
Query:    1 LSENKSKQHLISVEEGLQQIVKEIEEGLRIPRLPGLKTTFIEFDIITQGFQNSDLIIIAGRPSMGKTAFAFNLAKNIAQNHNTGVVFFSLEMTREQLLYRLLASEVEITNTRLRASSIKETEWLKINTKVSELSKLKLFIDDTPNLSVGEIKLKIKTIDLESSKYVSLIVIDYLQLLEGVDQNTNRVQELSKITRALKKLARDLNLPIIVLSQLSRNVESRVNKRPILADLRESGCINFL-PEKYLTKIKGGKN-FIFCWTGNSLKKQKILNLKLTGQKPIYKLESNLGLILLITSNHKILTNKGWKKIDQLVKNNFIGAKLLIGFKSLADFGKSSITWEKINKIKYFQLAPVYDLHISNYSNYLTNHLVIHNSIEQDADVVIMLYRDDYYNKETSKKNIIEIIIAKHRNGPIGSTTL 1248
            L +NKS +HLISVE+GLQQI++EIE+GL+IP+ PGLKTTFI+ DI+TQGFQNSDLIIIAGRPSMGKTAFAFNLAKNIAQ HNTGVVFFSLEMTR+QLLYRLLASEVEIT+TRLR S IKE EW +I+  +S+LS LKLFIDDTP LSV +IKLKIK I+LES+K +SLIVIDYLQLLEG DQNTNRVQELSKITRALKKLARDLN+PIIVLSQLSRNVESR+NKRPILADLRESGCINF   +K++   K  +N  ++CWTGN + KQKI N+K TGQKP+YKL++N G  L ITSNHKILT KGWKK++ +  NN I  KLL+  K LA + K+ ITW+K+ KI Y +LAPVYDL IS YSNY  N +++HNSIEQDADVVIMLYRDDYYNKE  K+NIIE+IIAKHRNGPIGST L
Sbjct:  153 LIDNKSTKHLISVEQGLQQIIREIEQGLKIPQTPGLKTTFIQLDILTQGFQNSDLIIIAGRPSMGKTAFAFNLAKNIAQYHNTGVVFFSLEMTRQQLLYRLLASEVEITSTRLRTSRIKEKEWFQIHKIISKLSNLKLFIDDTPELSVNDIKLKIKGINLESTKKISLIVIDYLQLLEGKDQNTNRVQELSKITRALKKLARDLNIPIIVLSQLSRNVESRINKRPILADLRESGCINFFFKDKFINFNKLLENRILYCWTGNFVSKQKIFNIKFTGQKPVYKLKTNYGWSLFITSNHKILTQKGWKKLNNITLNNLISTKLLLSIKFLAYYSKAFITWDKVIKITYQKLAPVYDLQISKYSNYFVNRVIVHNSIEQDADVVIMLYRDDYYNKENPKQNIIELIIAKHRNGPIGSTKL 570          
BLAST of mRNA_H-paniculata_contig51867.12525.1 vs. uniprot
Match: A0A3S8PYC9_9PHAE (Replicative DNA helicase n=15 Tax=Sargassaceae TaxID=3014 RepID=A0A3S8PYC9_9PHAE)

HSP 1 Score: 582 bits (1499), Expect = 3.250e-203
Identity = 297/416 (71.39%), Postives = 351/416 (84.38%), Query Frame = 1
Query:    1 LSENKSKQHLISVEEGLQQIVKEIEEGLRIPRLPGLKTTFIEFDIITQGFQNSDLIIIAGRPSMGKTAFAFNLAKNIAQNHNTGVVFFSLEMTREQLLYRLLASEVEITNTRLRASSIKETEWLKINTKVSELSKLKLFIDDTPNLSVGEIKLKIKTIDLESSKYVSLIVIDYLQLLEGVDQNTNRVQELSKITRALKKLARDLNLPIIVLSQLSRNVESRVNKRPILADLRESGCINFLPEKYLTKIKGGKNFIFCWTGNSLKKQKILNLKLTGQKPIYKLESNLGLILLITSNHKILTNKGWKKIDQLVKNNFIGAKLLIGFKSLADFGKSSITWEKINKIKYFQLAPVYDLHISNYSNYLTNHLVIHNSIEQDADVVIMLYRDDYYNKETSKKNIIEIIIAKHRNGPIGSTTL 1248
            L+ENKS +HLISV++GLQ+I KEIE+GL+ P L GLKTTFIE DIITQGFQNSDLIIIAGRPSMGKTAFAFNLAKNIAQ H+T VVFFSLEMT++QLLYRLL+SEV+IT+TRLRAS IKETEW +I+  +++LS L+LFIDDTP LSV ++KLK+K+I+ ES K +SL+VIDYLQLLE VDQN NRVQELSKITRALKKLARDLN+PIIVLSQLSRNVESRVNK+PILADLRESGCINF  +  +   K   + I+CWTG  L KQK+ ++K TGQKPIYKL +NLG  + +TS+HKILT KGWKK++Q+  N+ I  KL     S+  + KS ITW+KI KI Y +L  VYDL IS+YSNY+ N +V+HNSIEQDAD+VIMLYRDDYYNKE S+KNIIE+IIAKHRNGPIGST L
Sbjct:  153 LAENKSTKHLISVKQGLQEIAKEIEQGLKSPHLSGLKTTFIELDIITQGFQNSDLIIIAGRPSMGKTAFAFNLAKNIAQYHDTSVVFFSLEMTKQQLLYRLLSSEVKITSTRLRASRIKETEWFQIHRVINKLSSLRLFIDDTPELSVNDVKLKVKSINFESIKKISLVVIDYLQLLEEVDQNINRVQELSKITRALKKLARDLNIPIIVLSQLSRNVESRVNKKPILADLRESGCINFFFDNLIIN-KTKNSPIYCWTGKLLSKQKLFDIKFTGQKPIYKLSTNLGWSIFLTSDHKILTEKGWKKLNQVTSNDLISVKLFFYLSSITCYHKSFITWDKIIKINYQKLGNVYDLRISSYSNYVVNRIVVHNSIEQDADIVIMLYRDDYYNKENSEKNIIELIIAKHRNGPIGSTKL 567          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig51867.12525.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D1J713_ECTSI1.740e-28999.76Replicative DNA helicase n=2 Tax=Ectocarpus silicu... [more]
A0A1I9LVP9_9PHAE1.680e-25287.02Replicative DNA helicase n=1 Tax=Pleurocladia lacu... [more]
A0A344PF29_9PHAE4.130e-24584.41Replicative DNA helicase n=4 Tax=Scytosiphonaceae ... [more]
A0A6B7EUP7_9PHAE1.740e-23982.69Replicative DNA helicase n=1 Tax=Cladosiphon okamu... [more]
A0A8F0JYE4_9PHAE1.810e-23982.54Replicative DNA helicase n=2 Tax=Laminariales TaxI... [more]
A0A8F0F9P7_9PHAE1.270e-23481.29Replicative DNA helicase n=1 Tax=Chorda asiatica T... [more]
A0A140G1D3_UNDPI5.540e-23480.43Replicative DNA helicase n=30 Tax=Laminariales Tax... [more]
A0A8F0FB27_9PHAE3.760e-22978.66Replicative DNA helicase n=1 Tax=Desmarestia acule... [more]
D1GJP3_FUCVE2.440e-21374.64Replicative DNA helicase n=3 Tax=Fucaceae TaxID=30... [more]
A0A3S8PYC9_9PHAE3.250e-20371.39Replicative DNA helicase n=15 Tax=Sargassaceae Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig51867contigH-paniculata_contig51867:2..1249 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score803.1
Seed ortholog evalue6e-230
Seed eggNOG ortholog2880.D1J713
Preferred namednaB
Hectar predicted targeting categoryother localisation
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0009507,GO:0009536,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044444,GO:0044464
EggNOG free text desc.DnaB-like helicase C terminal domain
EggNOG OGs2QRXQ@2759,COG0305@1
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons1
Model size1248
Cds size1248
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930512.9304721-CDS-H-paniculata_contig51867:1..12491622930512.9304721-CDS-H-paniculata_contig51867:1..1249Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig51867 2..1249 -
1691481325.991234-CDS-H-paniculata_contig51867:1..12491691481325.991234-CDS-H-paniculata_contig51867:1..1249Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig51867 2..1249 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig51867.12525.1prot_H-paniculata_contig51867.12525.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig51867 2..1249 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig51867.12525.1

>prot_H-paniculata_contig51867.12525.1 ID=prot_H-paniculata_contig51867.12525.1|Name=mRNA_H-paniculata_contig51867.12525.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=416bp
LSENKSKQHLISVEEGLQQIVKEIEEGLRIPRLPGLKTTFIEFDIITQGF
QNSDLIIIAGRPSMGKTAFAFNLAKNIAQNHNTGVVFFSLEMTREQLLYR
LLASEVEITNTRLRASSIKETEWLKINTKVSELSKLKLFIDDTPNLSVGE
IKLKIKTIDLESSKYVSLIVIDYLQLLEGVDQNTNRVQELSKITRALKKL
ARDLNLPIIVLSQLSRNVESRVNKRPILADLRESGCINFLPEKYLTKIKG
GKNFIFCWTGNSLKKQKILNLKLTGQKPIYKLESNLGLILLITSNHKILT
NKGWKKIDQLVKNNFIGAKLLIGFKSLADFGKSSITWEKINKIKYFQLAP
VYDLHISNYSNYLTNHLVIHNSIEQDADVVIMLYRDDYYNKETSKKNIIE
IIIAKHRNGPIGSTTL
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mRNA from alignment at H-paniculata_contig51867:2..1249-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig51867.12525.1 ID=mRNA_H-paniculata_contig51867.12525.1|Name=mRNA_H-paniculata_contig51867.12525.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1248bp|location=Sequence derived from alignment at H-paniculata_contig51867:2..1249- (Halopteris paniculata Hal_grac_a_UBK monoicous)
TTATCAGAAAATAAATCAAAGCAACATCTAATTAGTGTAGAAGAAGGTTT GCAACAAATTGTAAAGGAAATTGAGGAGGGTTTAAGGATACCAAGGTTAC CTGGTTTAAAAACAACCTTTATAGAGTTTGATATAATAACTCAAGGATTT CAAAATTCTGATCTTATTATTATCGCGGGTCGTCCTTCTATGGGAAAAAC AGCTTTTGCTTTTAACCTTGCAAAAAATATTGCCCAAAACCATAATACTG GAGTAGTTTTTTTTAGTTTAGAGATGACTCGAGAACAATTATTATATCGT TTATTGGCATCTGAAGTTGAAATAACAAATACCAGATTACGAGCATCAAG TATCAAAGAAACAGAATGGCTTAAAATAAATACTAAGGTTAGTGAGTTAT CAAAGCTAAAGCTTTTTATTGATGATACACCAAACTTATCGGTAGGTGAA ATAAAATTAAAAATAAAGACTATTGATCTTGAATCATCGAAATACGTAAG TTTAATTGTGATTGATTATTTACAGTTATTAGAGGGTGTTGATCAAAATA CAAATCGAGTTCAAGAACTTTCTAAAATCACAAGAGCTTTAAAAAAATTA GCACGTGATTTAAACCTACCAATTATTGTTTTATCTCAATTAAGTAGAAA CGTAGAAAGTCGAGTAAATAAGCGTCCAATTTTAGCAGATTTGAGAGAAA GTGGGTGTATTAATTTTTTACCTGAAAAATATCTAACAAAAATAAAAGGG GGAAAAAATTTTATTTTTTGTTGGACTGGCAATTCTCTAAAGAAACAAAA GATCTTAAATTTAAAGTTGACAGGTCAAAAACCTATATATAAATTAGAAA GTAATTTAGGCCTTATATTATTAATAACTAGTAATCATAAAATTTTGACA AATAAAGGTTGGAAAAAAATTGACCAGTTAGTAAAAAATAATTTTATTGG GGCTAAATTACTAATAGGATTTAAATCCCTTGCTGATTTTGGGAAATCTT CTATAACATGGGAAAAAATTAATAAAATAAAGTACTTTCAATTAGCACCT GTTTATGATTTGCATATTTCAAATTATTCAAATTATTTAACTAACCATTT AGTTATCCATAATTCGATTGAACAAGATGCCGATGTTGTTATTATGCTTT ACCGGGATGATTATTATAATAAAGAAACCTCTAAAAAAAATATAATTGAG ATAATCATTGCTAAGCATAGAAATGGCCCAATTGGATCAACAACATTA
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Coding sequence (CDS) from alignment at H-paniculata_contig51867:2..1249-

>mRNA_H-paniculata_contig51867.12525.1 ID=mRNA_H-paniculata_contig51867.12525.1|Name=mRNA_H-paniculata_contig51867.12525.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2496bp|location=Sequence derived from alignment at H-paniculata_contig51867:2..1249- (Halopteris paniculata Hal_grac_a_UBK monoicous)
TTATCAGAAAATAAATCAAAGCAACATCTAATTAGTGTAGAAGAAGGTTT
GCAACAAATTGTAAAGGAAATTGAGGAGGGTTTAAGGATACCAAGGTTAC
CTGGTTTAAAAACAACCTTTATAGAGTTTGATATAATAACTCAAGGATTT
CAAAATTCTGATCTTATTATTATCGCGGGTCGTCCTTCTATGGGAAAAAC
AGCTTTTGCTTTTAACCTTGCAAAAAATATTGCCCAAAACCATAATACTG
GAGTAGTTTTTTTTAGTTTAGAGATGACTCGAGAACAATTATTATATCGT
TTATTGGCATCTGAAGTTGAAATAACAAATACCAGATTACGAGCATCAAG
TATCAAAGAAACAGAATGGCTTAAAATAAATACTAAGGTTAGTGAGTTAT
CAAAGCTAAAGCTTTTTATTGATGATACACCAAACTTATCGGTAGGTGAA
ATAAAATTAAAAATAAAGACTATTGATCTTGAATCATCGAAATACGTAAG
TTTAATTGTGATTGATTATTTACAGTTATTAGAGGGTGTTGATCAAAATA
CAAATCGAGTTCAAGAACTTTCTAAAATCACAAGAGCTTTAAAAAAATTA
GCACGTGATTTAAACCTACCAATTATTGTTTTATCTCAATTAAGTAGAAA
CGTAGAAAGTCGAGTAAATAAGCGTCCAATTTTAGCAGATTTGAGAGAAA
GTGGGTGTATTAATTTTTTACCTGAAAAATATCTAACAAAAATAAAAGGG
GGAAAAAATTTTATTTTTTGTTGGACTGGCAATTCTCTAAAGAAACAAAA
GATCTTAAATTTAAAGTTGACAGGTCAAAAACCTATATATAAATTAGAAA
GTAATTTAGGCCTTATATTATTAATAACTAGTAATCATAAAATTTTGACA
AATAAAGGTTGGAAAAAAATTGACCAGTTAGTAAAAAATAATTTTATTGG
GGCTAAATTACTAATAGGATTTAAATCCCTTGCTGATTTTGGGAAATCTT
CTATAACATGGGAAAAAATTAATAAAATAAAGTACTTTCAATTAGCACCT
GTTTATGATTTGCATATTTCAAATTATTCAAATTATTTAACTAACCATTT
AGTTATCCATAATTCGATTGAACAAGATGCCGATGTTGTTATTATGCTTT
ACCGGGATGATTATTATAATAAAGAAACCTCTAAAAAAAATATAATTGAG
ATAATCATTGCTAAGCATAGAAATGGCCCAATTGGATCAACAACATTATT
ATCAGAAAATAAATCAAAGCAACATCTAATTAGTGTAGAAGAAGGTTTGC
AACAAATTGTAAAGGAAATTGAGGAGGGTTTAAGGATACCAAGGTTACCT
GGTTTAAAAACAACCTTTATAGAGTTTGATATAATAACTCAAGGATTTCA
AAATTCTGATCTTATTATTATCGCGGGTCGTCCTTCTATGGGAAAAACAG
CTTTTGCTTTTAACCTTGCAAAAAATATTGCCCAAAACCATAATACTGGA
GTAGTTTTTTTTAGTTTAGAGATGACTCGAGAACAATTATTATATCGTTT
ATTGGCATCTGAAGTTGAAATAACAAATACCAGATTACGAGCATCAAGTA
TCAAAGAAACAGAATGGCTTAAAATAAATACTAAGGTTAGTGAGTTATCA
AAGCTAAAGCTTTTTATTGATGATACACCAAACTTATCGGTAGGTGAAAT
AAAATTAAAAATAAAGACTATTGATCTTGAATCATCGAAATACGTAAGTT
TAATTGTGATTGATTATTTACAGTTATTAGAGGGTGTTGATCAAAATACA
AATCGAGTTCAAGAACTTTCTAAAATCACAAGAGCTTTAAAAAAATTAGC
ACGTGATTTAAACCTACCAATTATTGTTTTATCTCAATTAAGTAGAAACG
TAGAAAGTCGAGTAAATAAGCGTCCAATTTTAGCAGATTTGAGAGAAAGT
GGGTGTATTAATTTTTTACCTGAAAAATATCTAACAAAAATAAAAGGGGG
AAAAAATTTTATTTTTTGTTGGACTGGCAATTCTCTAAAGAAACAAAAGA
TCTTAAATTTAAAGTTGACAGGTCAAAAACCTATATATAAATTAGAAAGT
AATTTAGGCCTTATATTATTAATAACTAGTAATCATAAAATTTTGACAAA
TAAAGGTTGGAAAAAAATTGACCAGTTAGTAAAAAATAATTTTATTGGGG
CTAAATTACTAATAGGATTTAAATCCCTTGCTGATTTTGGGAAATCTTCT
ATAACATGGGAAAAAATTAATAAAATAAAGTACTTTCAATTAGCACCTGT
TTATGATTTGCATATTTCAAATTATTCAAATTATTTAACTAACCATTTAG
TTATCCATAATTCGATTGAACAAGATGCCGATGTTGTTATTATGCTTTAC
CGGGATGATTATTATAATAAAGAAACCTCTAAAAAAAATATAATTGAGAT
AATCATTGCTAAGCATAGAAATGGCCCAATTGGATCAACAACATTA
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