prot_H-paniculata_contig5176.12511.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig5176.12511.1
Unique Nameprot_H-paniculata_contig5176.12511.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length137
Homology
BLAST of mRNA_H-paniculata_contig5176.12511.1 vs. uniprot
Match: A0A6H5L5H7_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5H7_9PHAE)

HSP 1 Score: 122 bits (307), Expect = 9.170e-30
Identity = 63/136 (46.32%), Postives = 88/136 (64.71%), Query Frame = 0
Query:    1 NHLHKWVQANEMQIGIEKDGVMAIKGFRTERLRREAQKCQLGGEQLPIVEENRYLGIKFTRNLKVSTMMVGRLDGGKKLVGKITPFSRNTSIPVPLKASVVRSIVVPQMLYEAEIYGMNKKITSRMQKYLNQTCRL 136
            +H+  W+  NEM  GI K GVMAI G    RLR    + +L GE LPIVE   YLG++F R L V  MM  +L  G+KLV  +TP+     IPVPLK +VVR +++P++L+ AE++GM   IT+R+Q Y+N+  R+
Sbjct:  774 DHISVWMAENEMSAGIHKCGVMAI-GHGRRRLRERPDRWKLAGETLPIVESYTYLGLEFNRRLDVEVMMGNKLAAGEKLVTLMTPYLLCRQIPVPLKVAVVRGVILPRLLFGAEVFGMRTSITNRLQVYVNRAYRM 908          
BLAST of mRNA_H-paniculata_contig5176.12511.1 vs. uniprot
Match: L7JX89_TRAHO (RNA-directed DNA polymerase, Non LTR Retrotransposon (Fragment) n=1 Tax=Trachipleistophora hominis TaxID=72359 RepID=L7JX89_TRAHO)

HSP 1 Score: 68.2 bits (165), Expect = 1.170e-10
Identity = 35/133 (26.32%), Postives = 69/133 (51.88%), Query Frame = 0
Query:    3 LHKWVQANEMQIGIEKDGVMAIKGFRTERLRREAQKCQLGGEQLPIVEENRYLGIKFTRNLKVSTMMVGRLDGGKKLVGKITPFSRNTSIPVPLKASVVRSIVVPQMLYEAEIYGMNKKITSRMQKYLNQTCR 135
            L  W    +M + I K G+M            E +  +     +P VE  RYLGI   RNL + T++  R +  ++ +  I P      IP+P++ ++++S+++P   + +E+YGM+ + T+ +Q+ +++  R
Sbjct:  480 LEDWCDKWKMDLNISKCGLMVFNS-------NEQRAIKYKNANIPTVERYRYLGIPINRNLDLKTVINDRKEKAQQALMIIRPLISRIEIPLPIRVTLIKSVLIPTATFGSELYGMSSQRTAPIQRVIDKAVR 605          
BLAST of mRNA_H-paniculata_contig5176.12511.1 vs. uniprot
Match: A0A1R0GP03_9FUNG (RNA-directed DNA polymerase from mobile element jockey n=1 Tax=Smittium mucronatum TaxID=133383 RepID=A0A1R0GP03_9FUNG)

HSP 1 Score: 67.8 bits (164), Expect = 1.620e-10
Identity = 39/132 (29.55%), Postives = 71/132 (53.79%), Query Frame = 0
Query:    5 KWVQANEMQIGIEKDGVMAIKGFRTERLRREAQKCQLGGEQLPIVEENRYLGIKFTRNLKVSTMMVGRLDGGKKLVGKITPFSRNTSIPVPLKASVVRSIVVPQMLYEAEIYGMNKKITSRMQKYLNQTCRL 136
            +W +  EMQ+   K GVM I G +T  L        + G  +P VE  +YLG+ F       +++    +  ++ +  +  F  N +IP+ L+A+++RS+++P   Y  E++GM+K  TS++Q  ++   RL
Sbjct:  622 QWAKKWEMQVNASKCGVMGI-GSQTNML------FTIQGGAVPQVEHYKYLGVMFNDKWNHRSVINNNSENSRRAMNGMYFFLGNKNIPIALRATLIRSVLIPIATYGGELFGMSKARTSKLQTVIDTASRL 746          
BLAST of mRNA_H-paniculata_contig5176.12511.1 vs. uniprot
Match: A0A1J5WUS4_9MICR (Reverse transcriptase domain-containing protein n=1 Tax=Amphiamblys sp. WSBS2006 TaxID=1866961 RepID=A0A1J5WUS4_9MICR)

HSP 1 Score: 63.5 bits (153), Expect = 4.890e-9
Identity = 39/131 (29.77%), Postives = 67/131 (51.15%), Query Frame = 0
Query:    6 WVQANEMQIGIEKDGVMAIKGFRTERLRREAQKCQLGGEQLPIVEENRYLGIKFTRNLKVSTMMVGRLDGGKKLVGKITPFSRNTSIPVPLKASVVRSIVVPQMLYEAEIYGMNKKITSRMQKYLNQTCRL 136
            W +  EM+I  +K GV+   G   ER+        +G   +P V+   YLG++  +NL    ++  R   G++ V  +    R+ S+ +  K  +V+ IV+P MLY AE+YG   + T  MQ  +N+  ++
Sbjct:  662 WARRWEMEINPKKCGVITFYGSEEERVG-----IHIGEGPIPEVKSYTYLGVELDQNLTRKAVVEKRRKKGEECVFMLEKQLRSPSLTIGHKTLLVKGIVIPTMLYGAEVYGSTGEATRGMQTVVNKALKM 787          
BLAST of mRNA_H-paniculata_contig5176.12511.1 vs. uniprot
Match: A0A4Z0A355_9AGAM (Reverse transcriptase domain-containing protein n=1 Tax=Hericium alpestre TaxID=135208 RepID=A0A4Z0A355_9AGAM)

HSP 1 Score: 63.5 bits (153), Expect = 4.960e-9
Identity = 39/142 (27.46%), Postives = 71/142 (50.00%), Query Frame = 0
Query:    3 LHKWVQANEMQIGIEKDGVMAIKGFRTERLRREAQKCQLGGEQLPIVEENRYLGIKFTRNL--------KVSTMMVGRLDGGKKLVGKITPFSRNTSIPVPLKASVVRSIVVPQMLYEAEIYGMNKKITSRMQKYLNQTCRL 136
            ++ W Q   M++G+ K GVM       E     AQ        LPIV+  +YLGI+    L          ++ +  +   G K++  + P  R+ + P+P+KAS++R++++P M Y +E  G  K   + +Q+ +N+  +L
Sbjct:  698 IYDWGQKWGMELGLPKCGVMLFSTSDEEHQHHNAQTYSCADGDLPIVQMYKYLGIEMEPTLPNDRNADGNEASFVKRQAAKGDKVLNTLRPLLRDPTWPLPVKASIIRTLLMPIMTYGSEWVGYKKLNAAPIQRVVNKALKL 839          
BLAST of mRNA_H-paniculata_contig5176.12511.1 vs. uniprot
Match: A0A1R1XUN4_9FUNG (RNA-directed DNA polymerase from mobile element jockey n=1 Tax=Smittium culicis TaxID=133412 RepID=A0A1R1XUN4_9FUNG)

HSP 1 Score: 59.3 bits (142), Expect = 5.350e-8
Identity = 33/132 (25.00%), Postives = 67/132 (50.76%), Query Frame = 0
Query:    5 KWVQANEMQIGIEKDGVMAIKGFRTERLRREAQKCQLGGEQLPIVEENRYLGIKFTRNLKVSTMMVGRLDGGKKLVGKITPFSRNTSIPVPLKASVVRSIVVPQMLYEAEIYGMNKKITSRMQKYLNQTCRL 136
            +W +  EMQ+   K GV+ I G  T+ +        +    +P V+E +YLG+ F       + +    +   + +  +  F  N   P+ ++A+++RS+++P   Y  EI+GM++   +++QK ++   RL
Sbjct:   54 EWAEKWEMQVNASKCGVIGI-GQSTKMI------FMMQNGIVPQVKEYKYLGVMFNDKWNHVSAIKNNAEAASRAISGMYYFLENNKTPIAIRATLIRSVIIPIATYGGEIFGMSQSRINKLQKIVDLASRL 178          
BLAST of mRNA_H-paniculata_contig5176.12511.1 vs. uniprot
Match: A0A1J5WU32_9MICR (Reverse transcriptase domain-containing protein n=2 Tax=Amphiamblys sp. WSBS2006 TaxID=1866961 RepID=A0A1J5WU32_9MICR)

HSP 1 Score: 60.1 bits (144), Expect = 7.450e-8
Identity = 41/131 (31.30%), Postives = 65/131 (49.62%), Query Frame = 0
Query:    6 WVQANEMQIGIEKDGVMAIKGFRTERLRREAQKCQLGGEQLPIVEENRYLGIKFTRNLKVSTMMVGRLDGGKKLVGKITPFSRNTSIPVPLKASVVRSIVVPQMLYEAEIYGMNKKITSRMQKYLNQTCRL 136
            W    EM+I  +K GVM   G + E++    +     G  +P  +   YLG++  RNL   TM   R   G + +  +    R+ S+ +  K  +V+ I++P MLY AE+YG   K TS  Q  +N+  R+
Sbjct:  232 WAGRWEMEINPKKCGVMVFGGDQGEKVGVTTR-----GGTIPEPDSYTYLGVELDRNLSRKTMSERRRKKGLECLFMLEKNLRSPSLSIGHKTLLVKGILMPTMLYGAEVYGSIGKTTSGAQVVVNKALRM 357          
BLAST of mRNA_H-paniculata_contig5176.12511.1 vs. uniprot
Match: A0A1R1XKG1_9FUNG (RNA-directed DNA polymerase from mobile element jockey n=1 Tax=Smittium culicis TaxID=133412 RepID=A0A1R1XKG1_9FUNG)

HSP 1 Score: 59.3 bits (142), Expect = 1.500e-7
Identity = 33/132 (25.00%), Postives = 67/132 (50.76%), Query Frame = 0
Query:    5 KWVQANEMQIGIEKDGVMAIKGFRTERLRREAQKCQLGGEQLPIVEENRYLGIKFTRNLKVSTMMVGRLDGGKKLVGKITPFSRNTSIPVPLKASVVRSIVVPQMLYEAEIYGMNKKITSRMQKYLNQTCRL 136
            +W +  EMQ+   K GV+ I G  T+ +        +    +P V+E +YLG+ F       + +    +   + +  +  F  N   P+ ++A+++RS+++P   Y  EI+GM++   +++QK ++   RL
Sbjct: 1170 EWAEKWEMQVNASKCGVIGI-GQSTKMI------FMMQNGIVPQVKEYKYLGVMFNDKWNHVSAIKNNAEAASRAISGMYYFLENNKTPIAIRATLIRSVIIPIATYGGEIFGMSQSRINKLQKVVDLASRL 1294          
BLAST of mRNA_H-paniculata_contig5176.12511.1 vs. uniprot
Match: A0A0F9ZBM3_9MICR (Endonuclease-reverse transcriptase n=2 Tax=Nosema ceranae TaxID=40302 RepID=A0A0F9ZBM3_9MICR)

HSP 1 Score: 57.8 bits (138), Expect = 5.010e-7
Identity = 41/151 (27.15%), Postives = 72/151 (47.68%), Query Frame = 0
Query:    3 LHKWVQANEMQIGIEKDGVMAI-----------------KGFRTERLRREAQKCQLGGEQLPIVEENRYLGIKFTRNLKVSTMMVGRLDGGKKLVGKITPFSRNTSIPVPLKASVVRSIVVPQMLYEAEIYGMNKKITSRMQKYLNQTCRL 136
            L  W + +EM +   K G+M I                 K  R E+  +E +  ++ G  +P V E  YLGI+FT +L +++MM      G+K +G +        +PV +K   ++  +   + Y AE++GM+      +Q+ +N+ CRL
Sbjct:  518 LTSWSEKHEMSVNASKCGIMKIRATEDVIAGGPNFLQPNKKARVEQ--QEPEPFEIMGNVVPEVSEYIYLGIRFTPDLCLNSMMQHVESKGRKAIGAMYYLLSKKDMPVYVKILSIKVKLQSILTYGAEVWGMSTLRCKGIQRIMNEACRL 666          
BLAST of mRNA_H-paniculata_contig5176.12511.1 vs. uniprot
Match: A0A1J5WDW1_9MICR (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Amphiamblys sp. WSBS2006 TaxID=1866961 RepID=A0A1J5WDW1_9MICR)

HSP 1 Score: 55.5 bits (132), Expect = 1.370e-6
Identity = 38/119 (31.93%), Postives = 58/119 (48.74%), Query Frame = 0
Query:    6 WVQANEMQIGIEKDGVMAIKGFRTERLRREAQKCQLGGEQLPIVEENRYLGIKFTRNLKVSTMMVGRLDGGKKLVGKITPFSRNTSIPVPLKASVVRSIVVPQMLYEAEIYGMNKKITS 124
            W    EM+I  +K GVM   G + E++    +     G   P  +   YLG++  RNL   TM   R   G + +  +    R+ S+ +  K  +V+ I++P MLY AE+YG   K TS
Sbjct:   97 WAGRWEMEINPKKFGVMVFGGDQGEKVGVTTR-----GGTFPEPDSYTYLGVELDRNLSRKTMSERRRKKGLECLLMLEKNLRSPSLSIGHKTLLVKEILMPTMLYGAEVYGSIGKTTS 210          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5176.12511.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 12
Match NameE-valueIdentityDescription
A0A6H5L5H7_9PHAE9.170e-3046.32Reverse transcriptase domain-containing protein n=... [more]
L7JX89_TRAHO1.170e-1026.32RNA-directed DNA polymerase, Non LTR Retrotranspos... [more]
A0A1R0GP03_9FUNG1.620e-1029.55RNA-directed DNA polymerase from mobile element jo... [more]
A0A1J5WUS4_9MICR4.890e-929.77Reverse transcriptase domain-containing protein n=... [more]
A0A4Z0A355_9AGAM4.960e-927.46Reverse transcriptase domain-containing protein n=... [more]
A0A1R1XUN4_9FUNG5.350e-825.00RNA-directed DNA polymerase from mobile element jo... [more]
A0A1J5WU32_9MICR7.450e-831.30Reverse transcriptase domain-containing protein n=... [more]
A0A1R1XKG1_9FUNG1.500e-725.00RNA-directed DNA polymerase from mobile element jo... [more]
A0A0F9ZBM3_9MICR5.010e-727.15Endonuclease-reverse transcriptase n=2 Tax=Nosema ... [more]
A0A1J5WDW1_9MICR1.370e-631.93Reverse transcriptase domain-containing protein (F... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5176contigH-paniculata_contig5176:1228..1638 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5176.12511.1mRNA_H-paniculata_contig5176.12511.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig5176 1228..1638 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig5176.12511.1 ID=prot_H-paniculata_contig5176.12511.1|Name=mRNA_H-paniculata_contig5176.12511.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=137bp
NHLHKWVQANEMQIGIEKDGVMAIKGFRTERLRREAQKCQLGGEQLPIVE
ENRYLGIKFTRNLKVSTMMVGRLDGGKKLVGKITPFSRNTSIPVPLKASV
VRSIVVPQMLYEAEIYGMNKKITSRMQKYLNQTCRLM
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