mRNA_H-paniculata_contig11974.1251.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig11974.1251.1 vs. uniprot
Match: D8LIJ4_ECTSI (Pyruvate dehydrogenase E1 component subunit beta n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LIJ4_ECTSI) HSP 1 Score: 434 bits (1117), Expect = 5.280e-145 Identity = 215/244 (88.11%), Postives = 234/244 (95.90%), Query Frame = 1 Query: 1 VQAIDQIVNSAAKQLYMSAGDCPVPVVFRGPNGAAAGVGAQHSQCFAAWYSSIPALKVVSPWSSEDAKGLIKAAIRDPNPVVVLENELLYGVPFPMSDEAQSEDFVLPIGKAKVEKEGTDVTIVTFSKMVGVALEATELLQSQGVSAEVINLRTLRPLDYGTIISSVMKTNRLITVEEGWPQNGIGADISAVVIEEAFDHLDAPIERVTGADVPLPYALNLERMALPTKDDIVSAAVRTTYRSK 732 +QAIDQI+NSAAKQLYMSAGDCPVPVVFRGPNGAA+GVGAQHSQCFAAWYSS+PALKVVSPWSSEDAKGLIK+AIRDPNPVV LENELLYGV FPM+DEAQ EDFV+PIGKAKVE+EGTDV+IVTFSKMVG +LEA E+L +QG+SAEVINLRTLRPLDYGT+I SV KTNRL+TVEEGWPQNGIGADISAVV EEAFDHLDAPIERVTGADVP+PYALNLERMALP+K+DIVSA +RTTYRSK Sbjct: 119 LQAIDQILNSAAKQLYMSAGDCPVPVVFRGPNGAASGVGAQHSQCFAAWYSSVPALKVVSPWSSEDAKGLIKSAIRDPNPVVFLENELLYGVAFPMTDEAQGEDFVIPIGKAKVEQEGTDVSIVTFSKMVGTSLEAAEMLAAQGISAEVINLRTLRPLDYGTVIKSVQKTNRLVTVEEGWPQNGIGADISAVVCEEAFDHLDAPIERVTGADVPMPYALNLERMALPSKEDIVSAVLRTTYRSK 362
BLAST of mRNA_H-paniculata_contig11974.1251.1 vs. uniprot
Match: A0A835YH27_9STRA (Pyruvate dehydrogenase E1 component subunit beta n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YH27_9STRA) HSP 1 Score: 372 bits (955), Expect = 1.070e-120 Identity = 180/244 (73.77%), Postives = 212/244 (86.89%), Query Frame = 1 Query: 1 VQAIDQIVNSAAKQLYMSAGDCPVPVVFRGPNGAAAGVGAQHSQCFAAWYSSIPALKVVSPWSSEDAKGLIKAAIRDPNPVVVLENELLYGVPFPMSDEAQSEDFVLPIGKAKVEKEGTDVTIVTFSKMVGVALEATELLQSQGVSAEVINLRTLRPLDYGTIISSVMKTNRLITVEEGWPQNGIGADISAVVIEEAFDHLDAPIERVTGADVPLPYALNLERMALPTKDDIVSAAVRTTYRSK 732 +QAIDQ++NSAAKQLYM+AGD PVP+VFRGPNG+AAGV AQHSQCFAAWYSS+P LKVVSPWSSEDAKGLIK+AIRDPNPVVVLENE+LYGV FPMSDEAQ +DF++PIG+AKVEKEGTD+T+V S+ VG + A E L +G+ AEVINLRT+RP+DY T+I+SV KTNRL+TVEEGWPQNGIGADISA ++EEAFD+LDAPIERVT ADVP+PY+ LE A+P DI++A R YR K Sbjct: 115 MQAIDQVINSAAKQLYMTAGDIPVPIVFRGPNGSAAGVAAQHSQCFAAWYSSVPGLKVVSPWSSEDAKGLIKSAIRDPNPVVVLENEMLYGVSFPMSDEAQGKDFLVPIGQAKVEKEGTDITLVAHSRAVGHCMAAAEQLAKEGIKAEVINLRTIRPMDYATVIASVKKTNRLVTVEEGWPQNGIGADISANIVEEAFDYLDAPIERVTAADVPMPYSKPLEEAAVPQVPDILAAVKRALYREK 358
BLAST of mRNA_H-paniculata_contig11974.1251.1 vs. uniprot
Match: A0A482RDE1_9ARCH (Pyruvate dehydrogenase (acetyl-transferring) (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RDE1_9ARCH) HSP 1 Score: 348 bits (894), Expect = 4.240e-113 Identity = 168/244 (68.85%), Postives = 211/244 (86.48%), Query Frame = 1 Query: 1 VQAIDQIVNSAAKQLYMSAGDCPVPVVFRGPNGAAAGVGAQHSQCFAAWYSSIPALKVVSPWSSEDAKGLIKAAIRDPNPVVVLENELLYGVPFPMSDEAQSEDFVLPIGKAKVEKEGTDVTIVTFSKMVGVALEATELLQSQGVSAEVINLRTLRPLDYGTIISSVMKTNRLITVEEGWPQNGIGADISAVVIEEAFDHLDAPIERVTGADVPLPYALNLERMALPTKDDIVSAAVRTTYRSK 732 +QAIDQI+NSAAKQLYMSAGD VP+VFRG NGAAAGV AQHSQ FAAWYSS+P LKV+SPW+ EDA+GL+K+AIRD +PVV LENELLYG FP+S+EA+S +F++PIGKAK+E+ GTDVTI FS+MVGVAL A E L +G+SAEV+NLRTLRPLD +I++SV KT+RL++VEEGWPQ GIGA++ A++ EEAFD+LDAP+ER+TG DVP+PYA+NLE+ ALP K +I++AA R YR++ Sbjct: 8 LQAIDQIINSAAKQLYMSAGDINVPIVFRGTNGAAAGVAAQHSQDFAAWYSSVPGLKVLSPWNCEDARGLLKSAIRDNDPVVFLENELLYGTTFPLSEEARSSEFMIPIGKAKIERAGTDVTITAFSRMVGVALAAAEDLAKEGISAEVVNLRTLRPLDRDSIVASVKKTSRLVSVEEGWPQCGIGAELGAIIYEEAFDYLDAPVERITGVDVPMPYAINLEQAALPQKQNIINAAKRACYRTQ 251
BLAST of mRNA_H-paniculata_contig11974.1251.1 vs. uniprot
Match: A0A7S2T530_9CHLO (Pyruvate dehydrogenase E1 component subunit beta n=2 Tax=Chloropicon primus TaxID=1764295 RepID=A0A7S2T530_9CHLO) HSP 1 Score: 352 bits (904), Expect = 7.770e-113 Identity = 173/244 (70.90%), Postives = 207/244 (84.84%), Query Frame = 1 Query: 1 VQAIDQIVNSAAKQLYMSAGDCPVPVVFRGPNGAAAGVGAQHSQCFAAWYSSIPALKVVSPWSSEDAKGLIKAAIRDPNPVVVLENELLYGVPFPMSDEAQSEDFVLPIGKAKVEKEGTDVTIVTFSKMVGVALEATELLQSQGVSAEVINLRTLRPLDYGTIISSVMKTNRLITVEEGWPQNGIGADISAVVIEEAFDHLDAPIERVTGADVPLPYALNLERMALPTKDDIVSAAVRTTYRSK 732 +QAIDQI+NSAAK LYMSAG P+VFRGPNGAAAGVGAQHSQCF AWYSS P LKV++P+ EDA+GL+KAAIRDP+PV+ LENELLYG +P+ D+ DF LPIGKAKV +EGTDVT+V FSKMVG +LEATE+L +G+SAEVINLRTLRPLD TI+ S++KT+R+++VEEGWPQ+GIG++I+AV EEAFDHLDAP+ERVTGAD+P PYA NLE+ A PT DDIV+AA R YRSK Sbjct: 130 MQAIDQIINSAAKTLYMSAGTISCPIVFRGPNGAAAGVGAQHSQCFGAWYSSCPGLKVLAPYDCEDARGLLKAAIRDPDPVIFLENELLYGNSYPVDDKILDVDFTLPIGKAKVMREGTDVTLVAFSKMVGYSLEATEVLAEKGISAEVINLRTLRPLDRETIMKSIVKTSRIVSVEEGWPQSGIGSEITAVANEEAFDHLDAPVERVTGADIPTPYAANLEKSAFPTVDDIVTAAERACYRSK 373
BLAST of mRNA_H-paniculata_contig11974.1251.1 vs. uniprot
Match: A0A6S9FNS6_HETAK (Pyruvate dehydrogenase E1 component subunit beta n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9FNS6_HETAK) HSP 1 Score: 351 bits (900), Expect = 8.370e-113 Identity = 175/243 (72.02%), Postives = 206/243 (84.77%), Query Frame = 1 Query: 1 VQAIDQIVNSAAKQLYMSAGDCPVPVVFRGPNGAAAGVGAQHSQCFAAWYSSIPALKVVSPWSSEDAKGLIKAAIRDPNPVVVLENELLYGVPFPMSDEAQSEDFVLPIGKAKVEKEGTDVTIVTFSKMVGVALEATELLQSQGVSAEVINLRTLRPLDYGTIISSVMKTNRLITVEEGWPQNGIGADISAVVIE-EAFDHLDAPIERVTGADVPLPYALNLERMALPTKDDIVSAAVRTTYR 726 +QAID +VNSAAKQ YM+ GD P+VFRGPNGAAAGVGAQHSQCFAAWYSS P LKVVSPWSSEDAKGLIKAAIRDPNPVVVLENELLYGV FPMSD AQ +D+V+PIGKAKVE+EG DV+I+ FS+ V ALEA L+ +G+SAEV+NLRTLRP+D II +V KTNR++TVEEGWPQ G+G++I+AV++E EAFDHLDAP+ERV AD+P+ YALNLER +P DDI++AA R YR Sbjct: 90 MQAIDHVVNSAAKQFYMTNGDIACPIVFRGPNGAAAGVGAQHSQCFAAWYSSCPGLKVVSPWSSEDAKGLIKAAIRDPNPVVVLENELLYGVSFPMSDAAQKDDWVVPIGKAKVEREGADVSIIAFSRPVSFALEAAAELEKEGISAEVLNLRTLRPMDRQAIIDTVKKTNRVVTVEEGWPQCGLGSEIAAVIMETEAFDHLDAPVERVAMADIPMAYALNLERATVPQVDDILAAARRACYR 332
BLAST of mRNA_H-paniculata_contig11974.1251.1 vs. uniprot
Match: A0A7S4E516_9STRA (Pyruvate dehydrogenase E1 component subunit beta n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4E516_9STRA) HSP 1 Score: 351 bits (900), Expect = 2.070e-112 Identity = 177/243 (72.84%), Postives = 210/243 (86.42%), Query Frame = 1 Query: 1 VQAIDQIVNSAAKQLYMSAGDCPVPVVFRGPNGAAAGVGAQHSQCFAAWYSSIPALKVVSPWSSEDAKGLIKAAIRDPNPVVVLENELLYGVPFPMSDEAQSEDFVLPIGKAKVEKEGTDVTIVTFSKMVGVALEATELLQSQGVSAEVINLRTLRPLDYGTIISSVMKTNRLITVEEGWPQNGIGADISAVVIE-EAFDHLDAPIERVTGADVPLPYALNLERMALPTKDDIVSAAVRTTYR 726 +QAIDQIVNSAAKQ YMS GD VP+VFRGPNGAAAGV AQHSQCFA+W+S P LKVV+P+++EDAKGL+KAAIRDPNPVV LENELLYG FP+SDEAQS+DFVLP+GKA +E+EGTDVT+VTFSKMVG L+A E L +QG+SAEV+NLR+LRPLD II+SV KTNRL+ VEEGWPQ GI A+I AVV+E +AFD+LDAP+ERVTGADVP+ YA+ LE+M+LP +DIV+A RTT R Sbjct: 113 MQAIDQIVNSAAKQAYMSNGDMNVPIVFRGPNGAAAGVAAQHSQCFASWFSQCPGLKVVAPYNAEDAKGLLKAAIRDPNPVVFLENELLYGTSFPLSDEAQSKDFVLPLGKAHIEREGTDVTLVTFSKMVGYCLDAAEELAAQGISAEVLNLRSLRPLDRDAIINSVKKTNRLVAVEEGWPQCGIAAEICAVVMESDAFDYLDAPVERVTGADVPMAYAIPLEKMSLPQVEDIVAAVSRTTER 355
BLAST of mRNA_H-paniculata_contig11974.1251.1 vs. uniprot
Match: A0A7S2ME39_9STRA (Pyruvate dehydrogenase E1 component subunit beta n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2ME39_9STRA) HSP 1 Score: 350 bits (899), Expect = 4.650e-112 Identity = 174/245 (71.02%), Postives = 211/245 (86.12%), Query Frame = 1 Query: 1 VQAIDQIVNSAAKQLYMSAGDCPVPVVFRGPNGAAAGVGAQHSQCFAAWYSSIPALKVVSPWSSEDAKGLIKAAIRDPNPVVVLENELLYGVPFPMSDEAQSEDFVLPIGKAKVEKEGTDVTIVTFSKMVGVALEATELLQSQ-GVSAEVINLRTLRPLDYGTIISSVMKTNRLITVEEGWPQNGIGADISAVVIE-EAFDHLDAPIERVTGADVPLPYALNLERMALPTKDDIVSAAVRTTYRS 729 +QAIDQ++NSAAKQLYMSAG PVP+VFRGPNGAAAGV AQHSQCFAAWY+S+P LKVV+PW++ED +GL+KAAIRDPNPV+ LENELLYGVPFP+SDEAQS DF L IGKA VEKEGTDVTIV FSKMVG +LEA ++L Q ++ EVINLR++RPLD I+ SV KTNRL+TVEEGWPQ+G+G++I A ++E EAFD+LDAP+ RVTGADVP+PY++ LE ALP ++IVSA +RTT R+ Sbjct: 130 MQAIDQVINSAAKQLYMSAGTIPVPIVFRGPNGAAAGVAAQHSQCFAAWYASVPGLKVVAPWNAEDCRGLLKAAIRDPNPVIFLENELLYGVPFPLSDEAQSPDFTLEIGKANVEKEGTDVTIVAFSKMVGYSLEAAKILAEQHDLNVEVINLRSIRPLDIPAIVKSVKKTNRLVTVEEGWPQHGVGSEICAAMMETEAFDYLDAPVARVTGADVPMPYSVILEACALPQIENIVSAVLRTTART 374
BLAST of mRNA_H-paniculata_contig11974.1251.1 vs. uniprot
Match: A0A5A8DS88_CAFRO (Pyruvate dehydrogenase E1 component subunit beta n=4 Tax=Sar TaxID=2698737 RepID=A0A5A8DS88_CAFRO) HSP 1 Score: 350 bits (897), Expect = 6.650e-112 Identity = 177/245 (72.24%), Postives = 207/245 (84.49%), Query Frame = 1 Query: 1 VQAIDQIVNSAAKQLYMSAGDCPVPVVFRGPNGAAAGVGAQHSQCFAAWYSSIPALKVVSPWSSEDAKGLIKAAIRDPNPVVVLENELLYGVPFPMSDEAQSEDFVLPIGKAKVEKEGTDVTIVTFSKMVGVALEATELLQSQGVSAEVINLRTLRPLDYGTIISSVMKTNRLITVEEGWPQNGIGADISAVVIEE-AFDHLDAPIERVTGADVPLPYALNLERMALPTKDDIVSAAVRTTYRSK 732 +QAID ++NSAAKQLYMSAGD VP+VFRGPNG AAGV AQHSQCFA+WYS P LKVVSPW+SEDAKGL+KAAIRD NPVV+LENEL+YGV F MSDEA +DFV+ IGKAKVE+EGTDVTIVTFS+MVGVALEA + L+++G+SAEVINLRT+RPLD I SV KT+RLITVEEGWPQ+G+GA+I AV+ E AFD LDAP ER+TG DVP+PYA NLE A+P + IV+AA R YRS+ Sbjct: 121 MQAIDHVINSAAKQLYMSAGDINVPIVFRGPNGVAAGVAAQHSQCFASWYSHCPGLKVVSPWNSEDAKGLLKAAIRDDNPVVMLENELMYGVEFEMSDEAMRDDFVIEIGKAKVEREGTDVTIVTFSRMVGVALEAAKELEAKGISAEVINLRTIRPLDRDAIDKSVRKTSRLITVEEGWPQSGVGAEIQAVITETGAFDFLDAPPERITGVDVPMPYAQNLEEAAVPKANHIVAAAERVCYRSR 365
BLAST of mRNA_H-paniculata_contig11974.1251.1 vs. uniprot
Match: A0A6U3ZN28_9STRA (Pyruvate dehydrogenase E1 component subunit beta n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3ZN28_9STRA) HSP 1 Score: 348 bits (894), Expect = 1.690e-111 Identity = 172/244 (70.49%), Postives = 210/244 (86.07%), Query Frame = 1 Query: 1 VQAIDQIVNSAAKQLYMSAGDCPVPVVFRGPNGAAAGVGAQHSQCFAAWYSSIPALKVVSPWSSEDAKGLIKAAIRDPNPVVVLENELLYGVPFPMSDEAQSEDFVLPIGKAKVEKEGTDVTIVTFSKMVGVALEATELLQSQGVSAEVINLRTLRPLDYGTIISSVMKTNRLITVEEGWPQNGIGADISAVVIE-EAFDHLDAPIERVTGADVPLPYALNLERMALPTKDDIVSAAVRTTYRS 729 +QAIDQ+VNSAAKQ YMSAG+ P+VFRGPNG AAG GAQHSQCFAAWYSS P LKV+SP+SSEDAKGL+KAAIRDPNPVV+LE+EL+YGV FPMSDEAQS+DFVLPIGKAK+E+EG+D+T+VTFS+M G ALEA E+L ++G S EVINLRT+RPLD II+SV KT R +T+E GWPQ GIG++I+A+++E EAFD+LDAP+ER+TGADVP+PYA LE+ ALP +DIV+ R YR+ Sbjct: 116 MQAIDQVVNSAAKQYYMSAGNLACPIVFRGPNGNAAGTGAQHSQCFAAWYSSCPGLKVLSPYSSEDAKGLMKAAIRDPNPVVILEHELMYGVSFPMSDEAQSKDFVLPIGKAKIEREGSDITLVTFSQMTGFALEAAEVLAAKGTSVEVINLRTIRPLDRDAIINSVKKTGRCVTLETGWPQCGIGSEIAAILMESEAFDYLDAPMERITGADVPMPYAAELEKAALPQVEDIVNTVDRLMYRN 359
BLAST of mRNA_H-paniculata_contig11974.1251.1 vs. uniprot
Match: A0A6P6X5K0_COFAR (Pyruvate dehydrogenase E1 component subunit beta n=3 Tax=Coffea TaxID=13442 RepID=A0A6P6X5K0_COFAR) HSP 1 Score: 347 bits (890), Expect = 8.460e-111 Identity = 172/243 (70.78%), Postives = 207/243 (85.19%), Query Frame = 1 Query: 1 VQAIDQIVNSAAKQLYMSAGDCPVPVVFRGPNGAAAGVGAQHSQCFAAWYSSIPALKVVSPWSSEDAKGLIKAAIRDPNPVVVLENELLYGVPFPMSDEAQSEDFVLPIGKAKVEKEGTDVTIVTFSKMVGVALEATELLQSQGVSAEVINLRTLRPLDYGTIISSVMKTNRLITVEEGWPQNGIGADISAVVIEEAFDHLDAPIERVTGADVPLPYALNLERMALPTKDDIVSAAVRTTYRS 729 +QAID I+NSAAK YMS+G VP+VFRGPNGAAAGVGAQHSQC+AAWY+S P LKV+ P++SEDA+GL+KAAIRDP+PVV LENELLYG FP+S EA F LPIGKAK+E+EG DVTIV FSKMVG AL+A E+L +GVSAEVINLR++RPLD TI +SV KTNRL+TVEEG+PQ+G+GA+I A ++EE+F++LDAP+ER+TGADVP+PYA NLERMA+P DDIV AA RT YRS Sbjct: 120 MQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGAAAGVGAQHSQCYAAWYASCPGLKVLVPYNSEDARGLLKAAIRDPDPVVFLENELLYGESFPISAEALDSSFCLPIGKAKIEREGKDVTIVAFSKMVGYALQAAEILAKEGVSAEVINLRSIRPLDRATINTSVRKTNRLVTVEEGFPQHGVGAEICASIVEESFEYLDAPVERITGADVPMPYAANLERMAVPQVDDIVRAAKRTCYRS 362 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig11974.1251.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig11974.1251.1 >prot_H-paniculata_contig11974.1251.1 ID=prot_H-paniculata_contig11974.1251.1|Name=mRNA_H-paniculata_contig11974.1251.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=229bp MSAGDCPVPVVFRGPNGAAAGVGAQHSQCFAAWYSSIPALKVVSPWSSEDback to top mRNA from alignment at H-paniculata_contig11974:312..7446+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig11974.1251.1 ID=mRNA_H-paniculata_contig11974.1251.1|Name=mRNA_H-paniculata_contig11974.1251.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=7135bp|location=Sequence derived from alignment at H-paniculata_contig11974:312..7446+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig11974:312..7446+ >mRNA_H-paniculata_contig11974.1251.1 ID=mRNA_H-paniculata_contig11974.1251.1|Name=mRNA_H-paniculata_contig11974.1251.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1374bp|location=Sequence derived from alignment at H-paniculata_contig11974:312..7446+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |