prot_H-paniculata_contig5174.12508.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig5174.12508.1
Unique Nameprot_H-paniculata_contig5174.12508.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length65
Homology
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BLAST of mRNA_H-paniculata_contig5174.12508.1 vs. uniprot
Match: A0A6H5JAB6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAB6_9PHAE)

HSP 1 Score: 67.0 bits (162), Expect = 3.010e-12
Identity = 35/62 (56.45%), Postives = 47/62 (75.81%), Query Frame = 0 
Query:    4 TKRTYSQVTTSAQHTLQLENYGSEFSGAILYATFSVNSFLYQSVEEVDPVDAWALAGSAGGM 65
            T+R Y+QVTT+ Q +LQL+N    FSGAIL+ATFS+N F +Q+VEE DP    ++ G+AGGM
Sbjct:   50 TERGYTQVTTTGQQSLQLDN-ADPFSGAILFATFSINEFSFQTVEEYDPSHYPSMVGAAGGM 110
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BLAST of mRNA_H-paniculata_contig5174.12508.1 vs. uniprot
Match: D8LIE9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIE9_ECTSI)

HSP 1 Score: 58.9 bits (141), Expect = 1.200e-8
Identity = 30/55 (54.55%), Postives = 41/55 (74.55%), Query Frame = 0 
Query:   11 VTTSAQHTLQLENYGSEFSGAILYATFSVNSFLYQSVEEVDPVDAWALAGSAGGM 65
            VTT+ Q +LQ +N    FSGAIL+ATFS+N F +Q+VEE+D  D  ++ G+AGGM
Sbjct:  179 VTTTGQQSLQFDN-ADPFSGAILFATFSINEFSFQTVEELDTSDYVSMVGAAGGM 232
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5174.12508.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JAB6_9PHAE3.010e-1256.45Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LIE9_ECTSI1.200e-854.55Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5174contigH-paniculata_contig5174:12296..12639 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5174.12508.1mRNA_H-paniculata_contig5174.12508.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig5174 12296..12639 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig5174.12508.1 ID=prot_H-paniculata_contig5174.12508.1|Name=mRNA_H-paniculata_contig5174.12508.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=65bp
VGSTKRTYSQVTTSAQHTLQLENYGSEFSGAILYATFSVNSFLYQSVEEV
DPVDAWALAGSAGGM
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