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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Model size | 1914 |
| Cds size | 1530 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig5173.12507.1 >prot_H-paniculata_contig5173.12507.1 ID=prot_H-paniculata_contig5173.12507.1|Name=mRNA_H-paniculata_contig5173.12507.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=510bp
MSGAYPYARDEDVDYAASDEDDHPRSPSPEAEETAHDSPGSGSHRTVQDL
TTQQHMKMSVTQALARLGTGEDQELSPGIEKLINILASRDSSKSGNEGQG
GPGGVDTGLPSADSSAVGQTVGVGVDSNESTRDATPFDSSALPVQSSAVT
ATPGLPDITRSLAQLKSAASTVSPNDVRDIPRLTDDPALDVAGILDHYRM
VTGFKARAVDPTDTEFADNLAFRHLPLICDGSVLALYHQLMHGMIDWKAG
AINAETPDTPGSFTPPATWEELKVALLDTLTPANNIELCAVEIASIRQTN
DESVSEYALRYRALLARLESAVDRAAKRLGTRRTAWMALTVTLWQHGLHP
SLKTLQLQDKPPLHLQEAINRARRHEAVGLSGNVSSLAWNSQPNTKPVAQ
LDRKSPRGSRHVNRERGEPDNHRGQKRARSRPPTPSSPPPAERPSSRGST
AGAAKTRSTCTFPGCRSPTTHTTRNCFAKQRATRERRQNKASTSRKTKNE
GAQLVVRLV* back to topmRNA from alignment at H-paniculata_contig5173:12527..14465- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig5173.12507.1 ID=mRNA_H-paniculata_contig5173.12507.1|Name=mRNA_H-paniculata_contig5173.12507.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1939bp|location=Sequence derived from alignment at H-paniculata_contig5173:12527..14465- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GGTGTAGCTCAGCACTTTGGTACTCTCACGAAGGGAACTCTGACCCCATA
GCCCGCTCGGTGCGGGTTCGTGGGATACATCTCATCCTACTCGCGTGGGG
TGAGACTTATATTGGCGACCCCGTTGACCTTCAAGAGAAGATCGTGCTAA
GAGTTTCCGCACACCATGAGTGGAGCCTATCCGTACGCACGAGACGAAGA
TGTTGACTACGCTGCATCCGACGAAGATGACCACCCCAGGAGTCCTTCCC
CGGAGGCGGAAGAAACTGCTCACGACTCGCCTGGCTCTGGATCGCATCGC
ACAGTGCAGGATCTGACGACACAGCAGCACATGAAGATGTCGGTGACCCA
AGCGCTGGCACGCCTTGGTACTGGAGAGGACCAAGAGCTGAGCCCCGGGA
TCGAGAAGCTCATCAACATTCTGGCAAGTAGAGATTCATCTAAGTCAGGG
AATGAGGGTCAGGGTGGGCCTGGGGGCGTTGACACTGGGTTACCCAGTGC
GGATAGTTCCGCTGTCGGTCAAACTGTGGGTGTTGGAGTTGACAGTAATG
AGTCCACACGTGATGCTACCCCGTTTGATAGCTCCGCCTTGCCTGTTCAG
TCGTCTGCCGTAACAGCGACACCCGGACTACCGGACATCACTCGTTCGCT
TGCGCAGCTGAAATCTGCTGCTAGTACCGTCAGCCCGAATGATGTTCGTG
ACATTCCCCGTTTAACAGACGATCCTGCGCTTGACGTTGCCGGAATTCTT
GATCACTACCGAATGGTCACAGGCTTTAAAGCCCGAGCCGTCGATCCCAC
TGACACTGAGTTCGCCGACAATCTTGCTTTCCGTCACTTACCCCTCATAT
GTGATGGATCAGTGCTGGCGTTGTACCACCAGTTGATGCATGGTATGATT
GATTGGAAAGCCGGTGCAATAAACGCAGAAACACCTGATACTCCGGGATC
TTTCACTCCGCCCGCGACGTGGGAGGAGTTAAAGGTTGCACTATTGGACA
CTCTCACTCCAGCTAACAACATTGAACTTTGCGCAGTGGAGATAGCTTCC
ATTAGACAGACAAATGACGAGAGCGTATCAGAGTATGCTCTTCGCTATCG
TGCATTGCTCGCCCGTTTAGAGTCAGCAGTCGATCGTGCGGCCAAACGTT
TGGGCACTCGGCGCACAGCGTGGATGGCCTTGACCGTAACTCTTTGGCAG
CATGGTTTGCACCCTAGTTTGAAGACACTACAATTACAGGACAAGCCGCC
TTTACACCTACAAGAAGCTATTAATCGTGCCCGTAGGCATGAAGCGGTAG
GCCTGTCTGGTAACGTTAGCTCACTTGCATGGAACTCACAACCCAACACG
AAGCCCGTTGCCCAGTTAGACCGCAAGTCGCCCCGTGGCTCGCGCCACGT
TAACCGTGAGCGTGGCGAGCCGGATAACCACCGCGGCCAGAAACGCGCCC
GTAGCAGACCCCCCACCCCCTCTTCCCCACCCCCTGCCGAACGTCCGTCT
TCGCGAGGATCTACTGCTGGCGCCGCAAAGACACGAAGCACTTGCACCTT
CCCAGGATGCCGCTCTCCCACAACACACACTACGCGCAATTGCTTCGCGA
AGCAGAGAGCCACTCGGGAACGCCGTCAAAACAAGGCTTCGACATCCGCT
GAACCAGCCGTCCAGCCCAAAGAGGAAGACGAAGAATGAGGGTGCCCAGC
TAGTGGTACGTCTCGTCTAGTTGGGTCACCGTGCTCTACTGTTCGTACAG
TAGATCGTAGAGGCGTTAAGAGGCACACTGTCTCTTTTTCTCTAGCCGTG
CCTGCGGTAGATCGTGCCAATTACCTGCCTGACCCGCCACAAAAGAAAGT
CCGTTTTGCCGAGGTTTCGTCATTTCATCGTAACGCTGTTGGTAGCGCAC
CTTCACCCCGTGAGCTTTTGCCCGCTGGCGCGCGTCGCC back to topCoding sequence (CDS) from alignment at H-paniculata_contig5173:12527..14465- >mRNA_H-paniculata_contig5173.12507.1 ID=mRNA_H-paniculata_contig5173.12507.1|Name=mRNA_H-paniculata_contig5173.12507.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3060bp|location=Sequence derived from alignment at H-paniculata_contig5173:12527..14465- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGAGTGGAGCCTATCCGTACGCACGAGACGAAGATGTTGACTACGCTGC
ATCCGACGAAGATGACCACCCCAGGAGTCCTTCCCCGGAGGCGGAAGAAA
CTGCTCACGACTCGCCTGGCTCTGGATCGCATCGCACAGTGCAGGATCTG
ACGACACAGCAGCACATGAAGATGTCGGTGACCCAAGCGCTGGCACGCCT
TGGTACTGGAGAGGACCAAGAGCTGAGCCCCGGGATCGAGAAGCTCATCA
ACATTCTGGCAAGTAGAGATTCATCTAAGTCAGGGAATGAGGGTCAGGGT
GGGCCTGGGGGCGTTGACACTGGGTTACCCAGTGCGGATAGTTCCGCTGT
CGGTCAAACTGTGGGTGTTGGAGTTGACAGTAATGAGTCCACACGTGATG
CTACCCCGTTTGATAGCTCCGCCTTGCCTGTTCAGTCGTCTGCCGTAACA
GCGACACCCGGACTACCGGACATCACTCGTTCGCTTGCGCAGCTGAAATC
TGCTGCTAGTACCGTCAGCCCGAATGATGTTCGTGACATTCCCCGTTTAA
CAGACGATCCTGCGCTTGACGTTGCCGGAATTCTTGATCACTACCGAATG
GTCACAGGCTTTAAAGCCCGAGCCGTCGATCCCACTGACACTGAGTTCGC
CGACAATCTTGCTTTCCGTCACTTACCCCTCATATGTGATGGATCAGTGC
TGGCGTTGTACCACCAGTTGATGCATGGTATGATTGATTGGAAAGCCGGT
GCAATAAACGCAGAAACACCTGATACTCCGGGATCTTTCACTCCGCCCGC
GACGTGGGAGGAGTTAAAGGTTGCACTATTGGACACTCTCACTCCAGCTA
ACAACATTGAACTTTGCGCAGTGGAGATAGCTTCCATTAGACAGACAAAT
GACGAGAGCGTATCAGAGTATGCTCTTCGCTATCGTGCATTGCTCGCCCG
TTTAGAGTCAGCAGTCGATCGTGCGGCCAAACGTTTGGGCACTCGGCGCA
CAGCGTGGATGGCCTTGACCGTAACTCTTTGGCAGCATGGTTTGCACCCT
AGTTTGAAGACACTACAATTACAGGACAAGCCGCCTTTACACCTACAAGA
AGCTATTAATCGTGCCCGTAGGCATGAAGCGGTAGGCCTGTCTGGTAACG
TTAGCTCACTTGCATGGAACTCACAACCCAACACGAAGCCCGTTGCCCAG
TTAGACCGCAAGTCGCCCCGTGGCTCGCGCCACGTTAACCGTGAGCGTGG
CGAGCCGGATAACCACCGCGGCCAGAAACGCGCCCGTAGCAGACCCCCCA
CCCCCTCTTCCCCACCCCCTGCCGAACGTCCGTCTTCGCGAGGATCTACT
GCTGGCGCCGCAAAGACACGAAGCACTTGCACCTTCCCAGGATGCCGCTC
TCCCACAACACACACTACGCGCAATTGCTTCGCGAAGCAGAGAGCCACTC
GGGAACGCCGTCAAAACAAGGCTTCGACATCCATGAGTGGAGCCTATCCG
TACGCACGAGACGAAGATGTTGACTACGCTGCATCCGACGAAGATGACCA
CCCCAGGAGTCCTTCCCCGGAGGCGGAAGAAACTGCTCACGACTCGCCTG
GCTCTGGATCGCATCGCACAGTGCAGGATCTGACGACACAGCAGCACATG
AAGATGTCGGTGACCCAAGCGCTGGCACGCCTTGGTACTGGAGAGGACCA
AGAGCTGAGCCCCGGGATCGAGAAGCTCATCAACATTCTGGCAAGTAGAG
ATTCATCTAAGTCAGGGAATGAGGGTCAGGGTGGGCCTGGGGGCGTTGAC
ACTGGGTTACCCAGTGCGGATAGTTCCGCTGTCGGTCAAACTGTGGGTGT
TGGAGTTGACAGTAATGAGTCCACACGTGATGCTACCCCGTTTGATAGCT
CCGCCTTGCCTGTTCAGTCGTCTGCCGTAACAGCGACACCCGGACTACCG
GACATCACTCGTTCGCTTGCGCAGCTGAAATCTGCTGCTAGTACCGTCAG
CCCGAATGATGTTCGTGACATTCCCCGTTTAACAGACGATCCTGCGCTTG
ACGTTGCCGGAATTCTTGATCACTACCGAATGGTCACAGGCTTTAAAGCC
CGAGCCGTCGATCCCACTGACACTGAGTTCGCCGACAATCTTGCTTTCCG
TCACTTACCCCTCATATGTGATGGATCAGTGCTGGCGTTGTACCACCAGT
TGATGCATGGTATGATTGATTGGAAAGCCGGTGCAATAAACGCAGAAACA
CCTGATACTCCGGGATCTTTCACTCCGCCCGCGACGTGGGAGGAGTTAAA
GGTTGCACTATTGGACACTCTCACTCCAGCTAACAACATTGAACTTTGCG
CAGTGGAGATAGCTTCCATTAGACAGACAAATGACGAGAGCGTATCAGAG
TATGCTCTTCGCTATCGTGCATTGCTCGCCCGTTTAGAGTCAGCAGTCGA
TCGTGCGGCCAAACGTTTGGGCACTCGGCGCACAGCGTGGATGGCCTTGA
CCGTAACTCTTTGGCAGCATGGTTTGCACCCTAGTTTGAAGACACTACAA
TTACAGGACAAGCCGCCTTTACACCTACAAGAAGCTATTAATCGTGCCCG
TAGGCATGAAGCGGTAGGCCTGTCTGGTAACGTTAGCTCACTTGCATGGA
ACTCACAACCCAACACGAAGCCCGTTGCCCAGTTAGACCGCAAGTCGCCC
CGTGGCTCGCGCCACGTTAACCGTGAGCGTGGCGAGCCGGATAACCACCG
CGGCCAGAAACGCGCCCGTAGCAGACCCCCCACCCCCTCTTCCCCACCCC
CTGCCGAACGTCCGTCTTCGCGAGGATCTACTGCTGGCGCCGCAAAGACA
CGAAGCACTTGCACCTTCCCAGGATGCCGCTCTCCCACAACACACACTAC
GCGCAATTGCTTCGCGAAGCAGAGAGCCACTCGGGAACGCCGTCAAAACA
AGGCTTCGACATCCAGGAAGACGAAGAATGAGGGTGCCCAGCTAGTGGTA
CGTCTCGTCTAGAGGAAGACGAAGAATGAGGGTGCCCAGCTAGTGGTACG
TCTCGTCTAG back to top
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