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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
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| Hectar predicted targeting category | other localisation |
| Exons | 3 |
| Model size | 2087 |
| Cds size | 1335 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig5171.12503.1 >prot_H-paniculata_contig5171.12503.1 ID=prot_H-paniculata_contig5171.12503.1|Name=mRNA_H-paniculata_contig5171.12503.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=445bp
MVPLSAHQAIVESYEKECKAAVVEAAASSAASVRVIAGDFARRQEESSAQ
IRVKDEALANASSAVRDMSDSLVGLKRDVNALRNALRSHAARTEESRRAV
AEDIRRNEVVPERRRADEAEAGLSELRRSAHEWLATAHAVKLEAVTQALA
DGYLHGCGDGRAEAEADALRLELSLRTELDELRSDFALHRARSRETALTL
TMAVSDATRETSEMVSAAAKAGASALMASQDVWKAEGLAEGYARGRAEGF
VAGRLEGFSAGHAEGVKMDRSAAAAAAAKAEAAADDFTSRRVQVTEMGGK
TAGDQAAIEGEVGDTMATATVAAMAPADDAERDLREAFAAYVVSAHDQKL
SFARKEKFAAEEKARGLGEELAAARSVLAEVLQERISEIEARHNLVESHN
LSAEAQHSQSTALLKSPAWLDAAASVAEQRLSSAFWQECGGAQQ* back to topmRNA from alignment at H-paniculata_contig5171:10488..14481+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig5171.12503.1 ID=mRNA_H-paniculata_contig5171.12503.1|Name=mRNA_H-paniculata_contig5171.12503.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3994bp|location=Sequence derived from alignment at H-paniculata_contig5171:10488..14481+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
AGGGCATGGTACCGCTGTCGGCTCACCAGGCCATCGTGGAGTCATACGAG
AAGGAATGCAAGGCTGCCGTCGTAGAAGCAGCGGCCTCGAGTGCGGCAAG
CGTTAGGGTCATCGCGGGCGACTTTGCGAGGCGTCAGGAGGAGTCCTCGG
CTCAGATTCGAGTCAAAGACGAAGCTCTGGCAAACGCTTCTTCGGCCGTT
CGTGACATGTCGGACAGCCTGGTCGGCCTGAAGCGCGATGTGAACGCCCT
CAGAAACGCGCTCCGCAGGTACGGAAGCACAAGAGCATACTCTCTCGGAT
ACCTGTGCTAGTTAGTTTCATGTATTCAGAGCGTTAACTCTGAAGTCGAC
CACCGTTGGAGACTGACTGGCGTCTATCTACAAGGGTAAGCCTGATCCGC
GAGAGAGGACTTGGTCGTAGCATGAGGCGCTGTATACGTACAGGTGTTAT
TTGTTTTTCATCTGGATCCCCTCGACGTGGAGCAAGCAGCGGGACTTTGA
ACGAAAGACAAACTACAAGCAACCATTTTTATTACCCTTGAAAATAGAAC
CTGTAGGACAAAGCTAATATTTGAAGAAAGGGGTAATAGGCAATTTTGAT
GTCTTAGATATTGACTGCATACAGTTAGCGTTTTGGCTTGTTAAATATAC
AATAATTTACGTGTAGCGATAAGACAGGGTTTTTTTTTGTCGGAGACAGG
GTGGTTGATTGTTGGTGCCCAAAAGTGCCACTGGCACTATCCACAGTCTA
CGTTTTGCCACCGACCGTCGAATCTAGTTATGGTGTTGACTCACCGCTCT
CGTTGTAGCGTCGTGTTTTTTTTTTTTTTTACGATAGCGGCGCTAATCCT
GCCCTAGCCGTTCCTCGGGTCTGTTGCTGCAGAAGTCCCTGTTGTTGCAA
ACGGTAGCCAGCCAGGCGAGATTCAAGGCGTCCGGTTCACCATTGACCGT
ACGTTACACGGCGTGCAGACACTGTCAGTCACGATTTCGAACGAGGCCAA
TTAACGTGCTCGAGCATCCAGACCACCCTCAGGCTGTATCTGCTGGGCTT
TGGTGTGCTGTGGCTTTCTCTGCAAGAATATATCGCGTCGGTTTATCGCG
TAGATCGTTGACTGTAGTTGCGCAGGATTTACTCTGCAAGAATATATCGA
GCCGATACCATTGCAGTGAGCAATATGAATGAACGGTCGTGGCGATGAGA
ACACAGTTCTCCGTCGATGGACAACTTTTAAGCAGTCGGCATGATAGTAC
TTTGCCACAATGTTTATGTGTATGTATATACGGAGTTAGCTTGGCATGTT
GCACGAGCCAAACGTTGACTTTTGTGGTATTTTTACGGTTTATTTAGGAT
ATACTGCAGCACCATTGCGGGTCAAATAATACTGTTACACACATAAAGTC
CACTCGGTAAATATCTTCAAACAGTACATCTATCGAAGCGACTATGCGCC
AAACCACTCCCTTCACTCTTGTGACATACACCACAATAAACTCGGCTATT
CCGATCCACTCTGAAATATTTGCATTCCAAACGAGAAAAAAAGGAAATAG
AACAGTACGGCAATTTCGTTGGCCTGCGCCTGATGCACAACCCGTCTCTC
ATGTGCAACTCCATCCCCCTCTCCACACACGTGCACACACATGCACACCA
GAAAAATATTCAATGTACCCCTCATGCATGCTCTATTCCCGTTGTCCACA
CACGTGCACGTATCCTGCGAAGCCACGCTGCTCGCACGGAGGAATCGCGG
AGAGCGGTGGCTGAAGATATTCGACGAAATGAAGTTGTACCGGAACGGCG
GCGGGCGGATGAGGCAGAGGCCGGGCTCTCCGAGCTCCGCCGCTCCGCCC
ACGAATGGCTCGCGACCGCCCACGCCGTGAAGCTCGAGGCAGTCACGCAA
GCCCTCGCCGACGGCTATCTCCATGGTTGTGGCGACGGCCGAGCCGAGGC
GGAGGCCGACGCGCTGCGACTGGAGCTATCGTTACGAACCGAGTTGGATG
AGCTTCGCTCCGATTTCGCACTCCACCGCGCGCGGTCGCGCGAGACAGCG
CTGACTCTGACGATGGCTGTGTCCGATGCCACACGGGAGACTTCCGAGAT
GGTGTCGGCCGCTGCGAAGGCCGGCGCTTCCGCTCTAATGGCGTCACAAG
ACGTTTGGAAAGCCGAGGGGCTCGCCGAAGGTTATGCTCGTGGTAGAGCA
GAAGGGTTCGTCGCGGGCCGCCTGGAGGGGTTTTCTGCCGGGCATGCGGA
GGGTGTGAAGATGGATCGCTCGGCGGCGGCGGCGGCGGCAGCGAAAGCAG
AGGCCGCTGCCGATGATTTCACTAGTCGTCGCGTGCAGGTAACTGAAATG
GGAGGAAAGACCGCCGGGGACCAAGCAGCGATAGAGGGTGAAGTTGGTGA
TACTATGGCCACGGCGACAGTGGCGGCGATGGCACCAGCCGATGACGCGG
AACGAGATCTACGTGAGGCATTCGCCGCTTACGTTGTAAGCGCGCACGAT
CAGAAGTTGAGCTTCGCCCGAAAGGAAAAGTTCGCGGCAGAGGAGAAAGC
GCGCGGTTTGGGAGAAGAGCTCGCCGCCGCGAGGAGTGTCTTGGCCGAGG
TCTTGCAGGTGCGAGTTTGCCTCTGTGGTGTGTACCGTACGTTGTTGACC
TTGGCTATGTATTTAATGAGTCCACCTTGGAGCGGACCTTGTGGAATTCA
ATGGTATTTGTATTTGTCTTCTGTAGCTCATCTTTACAAGACTTCGTCGT
TGAGGCTCCAGTTGCTTGGAAAGAAATGTGGCGAGATAAGGAAGCGCAGA
TTTACGAACTGGTGGCGTGTAGAGCCTGTGGACCTCCCCGTTGCTCGTTT
CAGCTGTTTTTTAAGGGTCACGTATCTTCATGAGAACCGTTGTGATCGTA
GAGAGGAAGAGGAGCGCGGGGGGGTATTGTGTAATGCTCTAGCATCTAGC
CGTAAGTGTCGAATGAAGTTCTGTAGACGATTCCAACATTTGACGAGAAT
CGTTGCTGTTGTGGTCATGGTCACTCGTGTCTCGCGTATCTTGCACTTTG
CCGATCTACAGGAAAGAATCTCGGAGATTGAAGCAAGGCACAACTTGGTG
GAATCACACAACCTCTCTGCTGAGGCGCAGCACTCTCAATCTACCGCGTT
GCTCAAATCGCCGGCATGGCTCGACGCGGCTGCGTCGGTGGCCGAACAAC
GTTTGAGCTCCGCCTTTTGGCAGGAATGTGGTGGTGCGCAGCAGTAGTTC
GTATTCCTCCTCACTGAAACAAGAGAAATAATTCGACAGGGGTAACGGTG
GAGAGGGGCGATTGGCCAAGAGCGGGGGCAGCACCTGTTTGGAAGTGGCA
AATCAACCCTGCACTGCTGTAAAATTTCACCTGAGGTTATTTTTGCTTTC
ATCAGTTGTACCTCTTGGGAAAGTGCCCACCTGATATCACAATAACTTTG
AAAGTAAGCAGAAGCATATTATTCCTTGTCGAGGACACGTGAGTTGAAAT
TTGGTATTGACACAAGTGCGCGCGAGCGAAGCCTACGTTAAGATTTAGGG
TCGTTAGTAACGAGGGCGTTTTGTTCCTTTTTTTTTTTTCCGCTTTTTCT
GTTTTCCGGGTAATACCTCGAGGTTATCTTGAAATAATCTGGAAACATTG
GAACGGTGTCCAAGAACAGTGTACTGCGCAGGCAAAAATCGCACTTGGTC
CTTTTAAAAATATCGGAGGGGGGAAAGACGAGAAAAAGCACGTCAAAAGG
GGAAGACATTCTCGTCGGTAACGTCCCCCTCCTACGGTACATAAAATTAA
TCGTTGCAGGATGGCTTCCCAAGTAAATTGTTGACATGTATATCCTGATG
AAACTCTGGAGACAAATAGAGTAGGCAATTGCTCTCTCTCTAGGTTTTCA
CGCGCATACTCCCCAACTTCCACGGACCTACGCCCGAGCGGGTAGGGTAG
CTCGTGAACTGAGCATGACTGAAAGTCTAGTCAGAGGTCTTTTA back to topCoding sequence (CDS) from alignment at H-paniculata_contig5171:10488..14481+ >mRNA_H-paniculata_contig5171.12503.1 ID=mRNA_H-paniculata_contig5171.12503.1|Name=mRNA_H-paniculata_contig5171.12503.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2670bp|location=Sequence derived from alignment at H-paniculata_contig5171:10488..14481+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGTACCGCTGTCGGCTCACCAGGCCATCGTGGAGTCATACGAGAAGGA
ATGCAAGGCTGCCGTCGTAGAAGCAGCGGCCTCGAGTGCGGCAAGCGTTA
GGGTCATCGCGGGCGACTTTGCGAGGCGTCAGGAGGAGTCCTCGGCTCAG
ATTCGAGTCAAAGACGAAGCTCTGGCAAACGCTTCTTCGGCCGTTCGTGA
CATGTCGGACAGCCTGGTCGGCCTGAAGCGCGATGTGAACGCCCTCAGAA
ACGCGCTCCGCAGATGGTACCGCTGTCGGCTCACCAGGCCATCGTGGAGT
CATACGAGAAGGAATGCAAGGCTGCCGTCGTAGAAGCAGCGGCCTCGAGT
GCGGCAAGCGTTAGGGTCATCGCGGGCGACTTTGCGAGGCGTCAGGAGGA
GTCCTCGGCTCAGATTCGAGTCAAAGACGAAGCTCTGGCAAACGCTTCTT
CGGCCGTTCGTGACATGTCGGACAGCCTGGTCGGCCTGAAGCGCGATGTG
AACGCCCTCAGAAACGCGCTCCGCAGCCACGCTGCTCGCACGGAGGAATC
GCGGAGAGCGGTGGCTGAAGATATTCGACGAAATGAAGTTGTACCGGAAC
GGCGGCGGGCGGATGAGGCAGAGGCCGGGCTCTCCGAGCTCCGCCGCTCC
GCCCACGAATGGCTCGCGACCGCCCACGCCGTGAAGCTCGAGGCAGTCAC
GCAAGCCCTCGCCGACGGCTATCTCCATGGTTGTGGCGACGGCCGAGCCG
AGGCGGAGGCCGACGCGCTGCGACTGGAGCTATCGTTACGAACCGAGTTG
GATGAGCTTCGCTCCGATTTCGCACTCCACCGCGCGCGGTCGCGCGAGAC
AGCGCTGACTCTGACGATGGCTGTGTCCGATGCCACACGGGAGACTTCCG
AGATGGTGTCGGCCGCTGCGAAGGCCGGCGCTTCCGCTCTAATGGCGTCA
CAAGACGTTTGGAAAGCCGAGGGGCTCGCCGAAGGTTATGCTCGTGGTAG
AGCAGAAGGGTTCGTCGCGGGCCGCCTGGAGGGGTTTTCTGCCGGGCATG
CGGAGGGTGTGAAGATGGATCGCTCGGCGGCGGCGGCGGCGGCAGCGAAA
GCAGAGGCCGCTGCCGATGATTTCACTAGTCGTCGCGTGCAGGTAACTGA
AATGGGAGGAAAGACCGCCGGGGACCAAGCAGCGATAGAGGGTGAAGTTG
GTGATACTATGGCCACGGCGACAGTGGCGGCGATGGCACCAGCCGATGAC
GCGGAACGAGATCTACGTGAGGCATTCGCCGCTTACGTTGTAAGCGCGCA
CGATCAGAAGTTGAGCTTCGCCCGAAAGGAAAAGTTCGCGGCAGAGGAGA
AAGCGCGCGGTTTGGGAGAAGAGCTCGCCGCCGCGAGGAGTGTCTTGGCC
GAGGTCTTGCAGCCACGCTGCTCGCACGGAGGAATCGCGGAGAGCGGTGG
CTGAAGATATTCGACGAAATGAAGTTGTACCGGAACGGCGGCGGGCGGAT
GAGGCAGAGGCCGGGCTCTCCGAGCTCCGCCGCTCCGCCCACGAATGGCT
CGCGACCGCCCACGCCGTGAAGCTCGAGGCAGTCACGCAAGCCCTCGCCG
ACGGCTATCTCCATGGTTGTGGCGACGGCCGAGCCGAGGCGGAGGCCGAC
GCGCTGCGACTGGAGCTATCGTTACGAACCGAGTTGGATGAGCTTCGCTC
CGATTTCGCACTCCACCGCGCGCGGTCGCGCGAGACAGCGCTGACTCTGA
CGATGGCTGTGTCCGATGCCACACGGGAGACTTCCGAGATGGTGTCGGCC
GCTGCGAAGGCCGGCGCTTCCGCTCTAATGGCGTCACAAGACGTTTGGAA
AGCCGAGGGGCTCGCCGAAGGTTATGCTCGTGGTAGAGCAGAAGGGTTCG
TCGCGGGCCGCCTGGAGGGGTTTTCTGCCGGGCATGCGGAGGGTGTGAAG
ATGGATCGCTCGGCGGCGGCGGCGGCGGCAGCGAAAGCAGAGGCCGCTGC
CGATGATTTCACTAGTCGTCGCGTGCAGGTAACTGAAATGGGAGGAAAGA
CCGCCGGGGACCAAGCAGCGATAGAGGGTGAAGTTGGTGATACTATGGCC
ACGGCGACAGTGGCGGCGATGGCACCAGCCGATGACGCGGAACGAGATCT
ACGTGAGGCATTCGCCGCTTACGTTGTAAGCGCGCACGATCAGAAGTTGA
GCTTCGCCCGAAAGGAAAAGTTCGCGGCAGAGGAGAAAGCGCGCGGTTTG
GGAGAAGAGCTCGCCGCCGCGAGGAGTGTCTTGGCCGAGGTCTTGCAGGA
AAGAATCTCGGAGATTGAAGCAAGGCACAACTTGGTGGAATCACACAACC
TCTCTGCTGAGGCGCAGCACTCTCAATCTACCGCGTTGCTCAAATCGCCG
GCATGGCTCGACGCGGCTGCGTCGGTGGCCGAACAACGTTTGAGCTCCGC
CTTTTGGCAGGAATGTGGTGGTGCGCAGCAGTAGGAAAGAATCTCGGAGA
TTGAAGCAAGGCACAACTTGGTGGAATCACACAACCTCTCTGCTGAGGCG
CAGCACTCTCAATCTACCGCGTTGCTCAAATCGCCGGCATGGCTCGACGC
GGCTGCGTCGGTGGCCGAACAACGTTTGAGCTCCGCCTTTTGGCAGGAAT
GTGGTGGTGCGCAGCAGTAG back to top
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